ATP-dependent RNA helicase abstrakt
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30032549 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Human
Match: DDX41 (DEAD-box helicase 41 [Source:HGNC Symbol;Acc:HGNC:18674]) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 322/552 (58.33%), Postives = 412/552 (74.64%), Query Frame = 2 Query: 203 NDSVVKGPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIET--QGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKE--SHASADY 1843 D + GP+ +L+ +H H + +E K S EKQ E++IL ++AE AL V E+AK I Y + IKTSWTPP ++ S+SEE + +R + I+ EG+ IPP + F +M+ P L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++FCLEQE LPF EGP+GLII PSRELA QTH I+ + ++ S P L LCIGG S KEQ + R+G VH++VATPGRL+DLL+KK SL++CRYL LDEADRMIDMGFE +IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++I+ F++G+KDVLVATDVA KGLDFP I+HVINYDMP++IE YVHRIGRTGR G+ATTFINK+C+ES+L+DLK LL EA Q P L + + + D G+ GC++CGGLGHRI CPK E++Q +Q +IGRK+ +H+S D+ Sbjct: 74 EDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQED--SSPLLRCALCIGGMSVKEQMETIRHG-VHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF 622
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Human
Match: DDX23 (DEAD-box helicase 23 [Source:HGNC Symbol;Acc:HGNC:17347]) HSP 1 Score: 274.633 bits (701), Expect = 3.105e-81 Identity = 166/442 (37.56%), Postives = 251/442 (56.79%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEA 1654 ++ +++ + ++ R+ I +G IP + + D LP L V+ G K PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q R R G +V+ATPGRLID+LE + L+ C Y+VLDEADRMIDMGFE +++ + + +H+ RQT++F+ATMP +++ A+S L +P VV +G AG + + Q V + K ++LL L++ PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + V+NYDM +IE Y+HRIGRTGR K GVA TF+ K + ++ +LK + E+ Sbjct: 362 LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG-CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE-DSAVFYELKQAILES 786
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Human
Match: DDX5 (DEAD-box helicase 5 [Source:HGNC Symbol;Acc:HGNC:2746]) HSP 1 Score: 257.299 bits (656), Expect = 1.663e-76 Identity = 157/425 (36.94%), Postives = 232/425 (54.59%), Query Frame = 2 Query: 446 SEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSAL-------VKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLD-CLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA-TPEFLLAIE 1690 + + ++ R + I G N P +L F + P ++V+ + PTAIQ QG PVAL+G DM+G+A TGSGKTL + LP ++ Q PF++ +GP L++ P+RELA Q ++ + +L + CI G + K R GV + +ATPGRLID LE +L YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L + + ++ +++ DVE + KL RL++ + + + I+F E K D + + G A IH Q+ER ++ FK G+ +L+ATDVA +GLD ++ VINYD P+ E Y+HRIGRT R K G A TF + N + DL +L+EANQA P+ L +E Sbjct: 69 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRAC--------RLKST-CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVE---KDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPN-NIKQVSDLISVLREANQAINPKLLQLVE 476
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Human
Match: DDX5 (DEAD-box helicase 5 [Source:HGNC Symbol;Acc:HGNC:2746]) HSP 1 Score: 256.914 bits (655), Expect = 1.964e-76 Identity = 157/425 (36.94%), Postives = 232/425 (54.59%), Query Frame = 2 Query: 446 SEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSAL-------VKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLD-CLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA-TPEFLLAIE 1690 + + ++ R + I G N P +L F + P ++V+ + PTAIQ QG PVAL+G DM+G+A TGSGKTL + LP ++ Q PF++ +GP L++ P+RELA Q ++ + +L + CI G + K R GV + +ATPGRLID LE +L YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L + + ++ +++ DVE + KL RL++ + + + I+F E K D + + G A IH Q+ER ++ FK G+ +L+ATDVA +GLD ++ VINYD P+ E Y+HRIGRT R K G A TF + N + DL +L+EANQA P+ L +E Sbjct: 69 TAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRAC--------RLKST-CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVE---KDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPN-NIKQVSDLISVLREANQAINPKLLQLVE 476
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Human
Match: DDX3X (DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]) HSP 1 Score: 249.595 bits (636), Expect = 1.392e-73 Identity = 162/445 (36.40%), Postives = 240/445 (53.93%), Query Frame = 2 Query: 485 IIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLV--LFCLEQEMSLPFVDNEGPFG--------LIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAV---LCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF----RHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPP--VIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGLEDSQGDIGCSYCGGLGHR 1756 + A G N PP + F D+ + + + +++ PT +Q +P+ RD++ A TGSGKT F LP++ ++ +L + G +G L++ P+RELA Q I +E + F + V + GG +Q R G H++VATPGRL+D++E+ L+ C+YLVLDEADRM+DMGFE +IR + + R T++FSAT P++IQ A+ L + + + VGR G+ + NI Q V +V+ K LLD L T ++F E K D + ++L +G SIH Q +R ++ F+ G+ +LVAT VA +GLD ++HVIN+D+P DIE YVHRIGRTGR G+AT+F N+ N +I DL LL EA Q P +L +A E S+G + GG G R Sbjct: 129 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQ-----------IYEEARKFSYRSRVRPCVVYGGADIGQQI-RDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER-NINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSRFSGGFGAR 560
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Celegans
Match: sacy-1 (Suppressor of ACY-4 sterility [Source:UniProtKB/TrEMBL;Acc:Q9N5K1]) HSP 1 Score: 553.132 bits (1424), Expect = 0.000e+0 Identity = 297/535 (55.51%), Postives = 379/535 (70.84%), Query Frame = 2 Query: 227 KGKGTLIEHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVL-KVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGL--EDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGR 1816 + + TL+E H + + E E+Q E+E+L + L VAE+ K Y E I T+W PP I S+E+ ++ R + I EG++IPP + F +M+ PK L + K KGI PTAIQ+QG+PVAL+GRDMIGIASTGSGKT+ F LPLV+FCLEQEM LPF+ +EGPFGLII PSRELA Q +I ++ D + K P++ A LCIGG EQ R+G +H+VVATPGRL D+L KK +L +CRYLVLDEADRM+DMGFE+EI+++F +F+ QRQTLLFSATMPRKIQ FAKSALVKP+VVNVGRAGAA+LN+ Q++E+V+ E KL R+L+CLQKT P V+IF E+K +VD I+EYLL+KGV+ ASIH G Q +R I+ F++ +KDVLVATDVA KGLDF I HVIN+DMP+DIE YVHRIGRTGR ++G+ATTFINK S+L DLK LL EA Q PEFL LA + +G + + GC+YC GLGHRI CPK + N+ + R Sbjct: 92 EARKTLLEK-HAEIMETQGVIDESERQLMEEEELLDKVTRGGGLLAVAELTKGEKYEEPIVTAWRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGK--AGLPEMRAGLCIGGVPIGEQAKDVRDG-IHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGAASLNVLQELEFVRSENKLVRVLECLQKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKMLAGDEEGTAPAGTNAEKGCAYCSGLGHRITDCPKLAGIGNKTTQALAR 622
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Celegans
Match: ddx-23 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q95QN2]) HSP 1 Score: 261.922 bits (668), Expect = 1.159e-77 Identity = 161/441 (36.51%), Postives = 240/441 (54.42%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNE-----GPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKL---TAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQ-KTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEA 1654 ++ +S+ + ++ R+ I +G +P L + + P +K G PT IQ Q +P+ L RD+IG+A TGSGKT F LPL+++ SLP ++ + GP+ +I+ P+RELA Q I +E F KL V IGG S ++Q + R G V VV+ATPGRL+D+LE + LN C Y++LDEADRM+DMGFE +++ V Y RQT++F+ATM I++ A+ L +P VV++G AG + Q V V + K ++L++ L+ + +PP+IIF QK D + + L G +H G Q++R ++ K+G D+LVATDVAG+G+D + V+NYDM IE Y HRIGRTGR K G A TF+ + ++ DLK +L E+ Sbjct: 272 LSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWI----TSLPKMERQEHRDLGPYAIIMAPTRELAQQ-----------IEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMG-VEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYMPDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPD-DTAVYFDLKQVLVES 695
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Celegans
Match: vbh-1 (Vasa-and Belle-like Helicase [Source:UniProtKB/TrEMBL;Acc:Q65XX1]) HSP 1 Score: 255.758 bits (652), Expect = 3.517e-76 Identity = 160/413 (38.74%), Postives = 231/413 (55.93%), Query Frame = 2 Query: 497 GENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLE--QEMSLPFVDNEG-----PFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF---RHQRQTLLFSATMPRKIQQFAKSALVKPX-XXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCL--QKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQ 1696 G+++P + F + + + G PT +Q +P L RD++ A TGSGKT F LP++ L +M P G P L++ P+RELA Q HK T S N + TA+L G + ++Q +R R G H+++ATPGRLID++E+ L CRYLVLDEADRM+DMGFE +IR + + R T +FSAT P++IQ AK L + VGR G+ + NI Q + +V K L++ L + ++ V++F E K + + +L + + + SIH + Q ER R+++ F+ GQ +LVAT VA +GLD P +RHVINYD+P D + YVHRIGRTGR G+AT+F N N I DLK L+ E+NQ PE+L + + Sbjct: 115 GDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQ-------TAILYGGRENYRDQVNRLR-AGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDK-NRGIGRDLKNLIVESNQEVPEWLHQVAAE 518
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Celegans
Match: vbh-1 (Vasa-and Belle-like Helicase [Source:UniProtKB/TrEMBL;Acc:Q65XX1]) HSP 1 Score: 255.758 bits (652), Expect = 3.517e-76 Identity = 160/413 (38.74%), Postives = 231/413 (55.93%), Query Frame = 2 Query: 497 GENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLE--QEMSLPFVDNEG-----PFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF---RHQRQTLLFSATMPRKIQQFAKSALVKPX-XXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCL--QKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQ 1696 G+++P + F + + + G PT +Q +P L RD++ A TGSGKT F LP++ L +M P G P L++ P+RELA Q HK T S N + TA+L G + ++Q +R R G H+++ATPGRLID++E+ L CRYLVLDEADRM+DMGFE +IR + + R T +FSAT P++IQ AK L + VGR G+ + NI Q + +V K L++ L + ++ V++F E K + + +L + + + SIH + Q ER R+++ F+ GQ +LVAT VA +GLD P +RHVINYD+P D + YVHRIGRTGR G+AT+F N N I DLK L+ E+NQ PE+L + + Sbjct: 115 GDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQ-------TAILYGGRENYRDQVNRLR-AGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDK-NRGIGRDLKNLIVESNQEVPEWLHQVAAE 518
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Celegans
Match: vbh-1 (Vasa-and Belle-like Helicase [Source:UniProtKB/TrEMBL;Acc:Q65XX1]) HSP 1 Score: 255.758 bits (652), Expect = 3.517e-76 Identity = 160/413 (38.74%), Postives = 231/413 (55.93%), Query Frame = 2 Query: 497 GENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLE--QEMSLPFVDNEG-----PFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF---RHQRQTLLFSATMPRKIQQFAKSALVKPX-XXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCL--QKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQ 1696 G+++P + F + + + G PT +Q +P L RD++ A TGSGKT F LP++ L +M P G P L++ P+RELA Q HK T S N + TA+L G + ++Q +R R G H+++ATPGRLID++E+ L CRYLVLDEADRM+DMGFE +IR + + R T +FSAT P++IQ AK L + VGR G+ + NI Q + +V K L++ L + ++ V++F E K + + +L + + + SIH + Q ER R+++ F+ GQ +LVAT VA +GLD P +RHVINYD+P D + YVHRIGRTGR G+AT+F N N I DLK L+ E+NQ PE+L + + Sbjct: 115 GDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQ-------TAILYGGRENYRDQVNRLR-AGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDK-NRGIGRDLKNLIVESNQEVPEWLHQVAAE 518
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Fly
Match: abs (gene:FBgn0015331 transcript:FBtr0078967) HSP 1 Score: 626.706 bits (1615), Expect = 0.000e+0 Identity = 322/539 (59.74%), Postives = 404/539 (74.95%), Query Frame = 2 Query: 242 LIEHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGLEDSQGDI-GCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKE--SHASADY 1843 L +H K +E KLS +EKQ E++I+ +IA++ AL GVAE+AK I Y + IKT+W PP +I +SEE + +R + RI+ EGE P + F +M+ PK LN L KGIKNPT IQ+QGLP L GRD+IGIA TGSGKTLVF LP+++F LEQE SLPF NEGP+GLII PSRELA QTH+II S + + P++ + L +GG E D G VH+VVATPGRL+D+L+KK +L+MCRYL +DEADRMIDMGFEE++RT+FS+F+ QRQTLLFSATMP+KIQ FA+SALVKPV +NVGRAGAA++N+ Q VEYVK E K+ LLDCLQKT PPV+IF E+K +VD IHEYLL+KGV+A +IH G QEER R++D ++ G+KDVLVATDVA KGLDFP ++HVINYDMPDDIE YVHRIGRTGR +G+ATT INK+ +S+LLDLK LL E Q P+FL LA ET+ GD GC+YCGGLGHRI CPK E++QN+QA +IGR++ S+ +ADY Sbjct: 84 LDQHTELKKIAEAKKLSAVEKQLREEEKIMESIAQQKALMGVAELAKGIQYEQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHL--QACGMPEIRSCLAMGGLPVSEALDVISRG-VHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDSHGCTYCGGLGHRITECPKLEAVQNKQASNIGRRDYLSNTAADY 619
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Fly
Match: mahe (gene:FBgn0029979 transcript:FBtr0071132) HSP 1 Score: 279.641 bits (714), Expect = 1.556e-82 Identity = 182/498 (36.55%), Postives = 263/498 (52.81%), Query Frame = 2 Query: 233 KGTLIEHIHQSKNSEEDKLSELEKQKN--IEDEILRNIAE---KTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKP-XXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKP---------PVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLL 1681 G + +QS N L L K++ I+ E +N K + + KD + I P+ + + SE+ + IR + I G +P ++ F + LP + +K +G PTAIQ QG P+AL+GRD++GIA TGSGKTL + LP ++ Q P + EGP L++ P+RELA Q ++ D E + CI G S+K R + GV V++ATPGRLID LE ++ +L C YLVLDEADRM+DMGFE +IR + R RQ +++SAT P+++Q A L + +AN NIRQ VE K QRL+ L + P +I+F E K +V+ I + + +G +A SIH Q ER + F+ G+ ++L+ATDVA +GLD +++VINYD P+ E YVHRIGRTGR ++ G A TF N +L +L+EA Q + LL Sbjct: 145 NGAGVAGGYQSNNYNAAALGMLSKEERAEIQREKAKNPGRNLVKPKWENLEPFLKDFYNIH--------PNTL-AKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRH-------TCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPD-NAKQARELISVLEEAGQTPSQALL 622
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Fly
Match: mahe (gene:FBgn0029979 transcript:FBtr0344137) HSP 1 Score: 279.641 bits (714), Expect = 1.556e-82 Identity = 182/498 (36.55%), Postives = 263/498 (52.81%), Query Frame = 2 Query: 233 KGTLIEHIHQSKNSEEDKLSELEKQKN--IEDEILRNIAE---KTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKP-XXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKP---------PVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLL 1681 G + +QS N L L K++ I+ E +N K + + KD + I P+ + + SE+ + IR + I G +P ++ F + LP + +K +G PTAIQ QG P+AL+GRD++GIA TGSGKTL + LP ++ Q P + EGP L++ P+RELA Q ++ D E + CI G S+K R + GV V++ATPGRLID LE ++ +L C YLVLDEADRM+DMGFE +IR + R RQ +++SAT P+++Q A L + +AN NIRQ VE K QRL+ L + P +I+F E K +V+ I + + +G +A SIH Q ER + F+ G+ ++L+ATDVA +GLD +++VINYD P+ E YVHRIGRTGR ++ G A TF N +L +L+EA Q + LL Sbjct: 145 NGAGVAGGYQSNNYNAAALGMLSKEERAEIQREKAKNPGRNLVKPKWENLEPFLKDFYNIH--------PNTL-AKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQP---PIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRH-------TCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPD-NAKQARELISVLEEAGQTPSQALL 622
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Fly
Match: CG10333 (gene:FBgn0032690 transcript:FBtr0081072) HSP 1 Score: 276.559 bits (706), Expect = 2.345e-82 Identity = 163/453 (35.98%), Postives = 248/453 (54.75%), Query Frame = 2 Query: 437 NSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCL-QKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQAT--PEFLLAIETQ 1696 + ++E + ++ R+ + +G IP + + + PK ++++ G K PT IQ Q +P+ L RD+IG+A TGSGKTL F +PL+ + SLP ++ ++GP+ +I+ P+RELA Q + T + + V+ +GG S +EQ R R G +V+ATPGRLID+LE + LN C Y+VLDEADRMIDMGFE +++ + Y + RQT++F+ATMP +++ A++ L +P V +G G Q V + K ++L++ L +K PPVIIF QK D + + L G ++ ++H G QE+R ++ K G KD+LVATDVAG+G+D + VINYDM IE Y HRIGRTGR K G A +F+ K + ++ DLK + + +T PE + E Q Sbjct: 366 DEMTERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWI----QSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLG--------IRTVVVVGGLSREEQGFRLRLG-CEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKD-DSALFYDLKQCVSASPVSTCPPELMNHPEAQ 804
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Fly
Match: CG10077 (gene:FBgn0035720 transcript:FBtr0333083) HSP 1 Score: 270.781 bits (691), Expect = 3.506e-80 Identity = 161/410 (39.27%), Postives = 225/410 (54.88%), Query Frame = 2 Query: 485 IIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKP-XXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLL----DCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQG 1699 I +G+ +P + F + P +N ++ +G PTAIQ QG P+A++GRD++G+A TGSGKTL + LP V+ Q +GP L++ P+RELA Q ++ + + N CI G + K Q R GV +V+ATPGRLID LE+ + SL C YLVLDEADRM+DMGFE +IR + R RQ L++SAT P++++Q A+ L V + +AN NI Q V+ KL +L+ D + + IIF E K VD I + +G A +IH Q+ER + F+ G+ +LVATDVA +GLD ++ VINYD P + E YVHRIGRTGR G A T S N + DL +L+EANQ L+ + G Sbjct: 145 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPR---LERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNT---------CIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHS-NANKANDLIQVLREANQTINPKLMNMAMNG 541
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Zebrafish
Match: ddx23 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]) HSP 1 Score: 279.641 bits (714), Expect = 5.474e-84 Identity = 169/446 (37.89%), Postives = 255/446 (57.17%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQAT 1666 ++ +++ + ++ R+ I +G IP + + + LP L V++ G K+PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q R R G +V+ATPGRLID+LE + L+ C Y+VLDEADRMIDMGFE +++ + Y +H+ RQT++F+ATMP +++ A+S L +P VV +G AG + + Q V + K ++LL+ L +PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + V+NYDM +IE Y+HRIGRTGR K GVA TF+ K + S+ DLK + E+ +T Sbjct: 289 LDEMTDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDSDQGPYAIILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG-CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLEVLASGFEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKE-DSSVFYDLKQAILESPVST 717
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Zebrafish
Match: ddx23 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]) HSP 1 Score: 280.026 bits (715), Expect = 1.401e-83 Identity = 169/446 (37.89%), Postives = 255/446 (57.17%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQAT 1666 ++ +++ + ++ R+ I +G IP + + + LP L V++ G K+PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q R R G +V+ATPGRLID+LE + L+ C Y+VLDEADRMIDMGFE +++ + Y +H+ RQT++F+ATMP +++ A+S L +P VV +G AG + + Q V + K ++LL+ L +PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + V+NYDM +IE Y+HRIGRTGR K GVA TF+ K + S+ DLK + E+ +T Sbjct: 349 LDEMTDRDWRIFREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDSDQGPYAIILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG-CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLEVLASGFEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKE-DSSVFYDLKQAILESPVST 777
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Zebrafish
Match: ddx5 (DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]) HSP 1 Score: 264.233 bits (674), Expect = 1.251e-80 Identity = 170/444 (38.29%), Postives = 246/444 (55.41%), Query Frame = 2 Query: 446 SEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDN-EGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKP-XXXXXXXXXXXXLNIRQDVEYV---KHEGKLQRLL-DCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDIGCSYCGGLGHRI 1759 S + ++ R + I +G + P +++F + PK ++V+ + +PT IQ QG PVAL+G+DM+GIA TGSGKTL + LP ++ Q PF+++ +GP L++ P+RELA Q ++ + G KS CI G + K R GV + +ATPGRLID LE +L C YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L + + +AN NI Q V+ + E KL RLL + + + + IIF E K D + + G A IH Q+ER ++ FK G+ +L+ATDVA +GLD ++ VIN+D P++ E Y+HRIGRT R +K G A TF + N DL +L+EANQA L+ Q ED G S+ G R+ Sbjct: 71 SAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQ----PFLEHGDGPICLVLAPTRELAQQVQQVAAEY--GKASRIKS-------TCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPN-NMKQAHDLVSVLREANQAINPKLI----QMAEDRGGKSNWSFKGRTRWRV 496
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Zebrafish
Match: ddx5 (DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]) HSP 1 Score: 259.61 bits (662), Expect = 1.121e-77 Identity = 162/412 (39.32%), Postives = 235/412 (57.04%), Query Frame = 2 Query: 446 SEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDN-EGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKP-XXXXXXXXXXXXLNIRQDVEYV---KHEGKLQRLL-DCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA 1663 S + ++ R + I +G + P +++F + PK ++V+ + +PT IQ QG PVAL+G+DM+GIA TGSGKTL + LP ++ Q PF+++ +GP L++ P+RELA Q ++ + G KS CI G + K R GV + +ATPGRLID LE +L C YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L + + +AN NI Q V+ + E KL RLL + + + + IIF E K D + + G A IH Q+ER ++ FK G+ +L+ATDVA +GLD ++ VIN+D P++ E Y+HRIGRT R +K G A TF + N DL +L+EANQA Sbjct: 71 SAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQ----PFLEHGDGPICLVLAPTRELAQQVQQVAAEY--GKASRIKS-------TCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPN-NMKQAHDLVSVLREANQA 468
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Zebrafish
Match: DDX17 (si:dkey-156n14.5 [Source:ZFIN;Acc:ZDB-GENE-030131-18]) HSP 1 Score: 257.299 bits (656), Expect = 2.849e-76 Identity = 162/427 (37.94%), Postives = 233/427 (54.57%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXX-XXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQ----KTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA-TPEFLLAIET 1693 ++ +S+ +++ R ++ I G P + F + P+ ++VL + K PTAIQ QG P+AL+GRDM+GIA TGSGKTL + LP ++ Q P+++ +GP L++ P+RELA Q ++ D G + KS C+ G + K R GV + +ATPGRLID LE +L C YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L V +AN NI Q V+ K +L+ ++ + + IIF E K D + + G A IH Q ER + F+ G+ +L+ATDVA +GLD ++ VINYD P+ E YVHRIGRT R +G A TF N DL +L+EA QA P+ L ++T Sbjct: 66 VHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLERGDGPICLVLAPTRELAQQVQQVAFDY--GKSSRIKS-------TCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPG-NLRQARDLVRVLEEARQAINPKLLQLVDT 478
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Xenopus
Match: mep1a (meprin A subunit alpha [Source:Xenbase;Acc:XB-GENE-921661]) HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0 Identity = 318/554 (57.40%), Postives = 403/554 (72.74%), Query Frame = 2 Query: 203 NDSVVKGPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDI----GCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY*F 1849 D + GP+ +L+ +H H + +E K S EKQ E++IL ++ E AL V E+AK I Y + IKTSW PP I +SE +R + I+ EGE IP + F +M+ P L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++FCLEQE LPF EGP+GLII PSRELA QTH II + ++N FP L LCIGG S KEQ + + G VH++VATPGRL+DLL+KK SL++CRYL LDEADRMIDMGFEE+IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKP+ +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++I+ F++ +KDVLVATDVA KGLDFP I+HV+NYDMP++IE YVHRIGRTGR G+ATTFINKSC+ES+L+DLK LL EA Q P L + G +++ DI GC++CGGLGHRI CPK E++Q +Q +GRK+ A++ F Sbjct: 66 EDDIPLGPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVTEGRALMSVKEMAKGITYDDPIKTSWKPPRHILEMSEARHDRVRSKYHILVEGERIPQPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFAKREGPYGLIICPSRELARQTHSIIEYYCHLLQEDN--FPHLRTALCIGGMSVKEQMETIKQG-VHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREEKKDVLVATDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGNTGIATTFINKSCDESVLMDLKALLMEAKQRVPPVLQVL--NGSDETMLDIGDERGCAFCGGLGHRITDCPKLEAMQTKQVSTMGRKDYLATSSMDF 614
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Xenopus
Match: mep1a (meprin A subunit alpha [Source:Xenbase;Acc:XB-GENE-921661]) HSP 1 Score: 347.051 bits (889), Expect = 1.323e-113 Identity = 183/323 (56.66%), Postives = 226/323 (69.97%), Query Frame = 2 Query: 203 NDSVVKGPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKP 1168 D + GP+ +L+ +H H + +E K S EKQ E++IL ++ E AL V E+AK I Y + IKTSW PP I +SE +R + I+ EGE IP + F +M+ P L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++FCLEQE LPF EGP+GLII PSRELA QTH II + ++N FP L LCIGG S KEQ + + GVH++VATPGRL+DLL+KK SL++CRYL LDEADRMIDMGFEE+IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKP Sbjct: 62 EDDIPLGPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVTEGRALMSVKEMAKGITYDDPIKTSWKPPRHILEMSEARHDRVRSKYHILVEGERIPQPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFAKREGPYGLIICPSRELARQTHSIIEYYCHLLQEDN--FPHLRTALCIGGMSVKEQMETIKQ-GVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKP 381
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Xenopus
Match: ankrd9 (ankyrin repeat domain 9 [Source:Xenbase;Acc:XB-GENE-955835]) HSP 1 Score: 279.256 bits (713), Expect = 1.436e-84 Identity = 169/442 (38.24%), Postives = 251/442 (56.79%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEA 1654 ++ +++ + ++ R+ I +G IP + + D LP L V+ G K PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q R R G +V+ATPGRLID+LE + L+ C Y+VLDEADRMIDMGFE +++ + + +H+ RQT++F+ATMP +++ A+S L +P VV +G AG + + Q V + K ++LL L+K PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + V+NYDM +IE Y+HRIGRTGR K GVA TF+ K + S+ DLK + E+ Sbjct: 182 LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWVDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG-CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMTANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSEAEKRKKLLAILEKGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE-DSSVFYDLKQAILES 606
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Xenopus
Match: ankrd9 (ankyrin repeat domain 9 [Source:Xenbase;Acc:XB-GENE-955835]) HSP 1 Score: 278.87 bits (712), Expect = 2.799e-84 Identity = 169/442 (38.24%), Postives = 251/442 (56.79%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEA 1654 ++ +++ + ++ R+ I +G IP + + D LP L V+ G K PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q R R G +V+ATPGRLID+LE + L+ C Y+VLDEADRMIDMGFE +++ + + +H+ RQT++F+ATMP +++ A+S L +P VV +G AG + + Q V + K ++LL L+K PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + V+NYDM +IE Y+HRIGRTGR K GVA TF+ K + S+ DLK + E+ Sbjct: 210 LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWVDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG-CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMTANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSEAEKRKKLLAILEKGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE-DSSVFYDLKQAILES 634
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Xenopus
Match: ankrd9 (ankyrin repeat domain 9 [Source:Xenbase;Acc:XB-GENE-955835]) HSP 1 Score: 279.256 bits (713), Expect = 8.211e-84 Identity = 169/442 (38.24%), Postives = 251/442 (56.79%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEA 1654 ++ +++ + ++ R+ I +G IP + + D LP L V+ G K PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q R R G +V+ATPGRLID+LE + L+ C Y+VLDEADRMIDMGFE +++ + + +H+ RQT++F+ATMP +++ A+S L +P VV +G AG + + Q V + K ++LL L+K PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + V+NYDM +IE Y+HRIGRTGR K GVA TF+ K + S+ DLK + E+ Sbjct: 270 LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWVDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG-CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMTANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSEAEKRKKLLAILEKGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE-DSSVFYDLKQAILES 694
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Mouse
Match: Ddx41 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Source:MGI Symbol;Acc:MGI:1920185]) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 322/552 (58.33%), Postives = 412/552 (74.64%), Query Frame = 2 Query: 203 NDSVVKGPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIET--QGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKE--SHASADY 1843 D + GP+ +L+ +H H + +E K S EKQ E++IL ++AE AL V E+AK I Y + IKTSWTPP ++ S+SEE + +R + I+ EG+ IPP + F +M+ P L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++FCLEQE LPF EGP+GLII PSRELA QTH I+ + ++ S P L LCIGG S KEQ + R+G VH++VATPGRL+DLL+KK SL++CRYL LDEADRMIDMGFE +IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++I+ F++G+KDVLVATDVA KGLDFP I+HVINYDMP++IE YVHRIGRTGR G+ATTFINK+C+ES+L+DLK LL EA Q P L + + + D G+ GC++CGGLGHRI CPK E++Q +Q +IGRK+ +H+S D+ Sbjct: 74 EDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQED--SSPLLRCALCIGGMSVKEQMETIRHG-VHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF 622
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Mouse
Match: Ddx41 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Source:MGI Symbol;Acc:MGI:1920185]) HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0 Identity = 322/552 (58.33%), Postives = 412/552 (74.64%), Query Frame = 2 Query: 203 NDSVVKGPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIET--QGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKE--SHASADY 1843 D + GP+ +L+ +H H + +E K S EKQ E++IL ++AE AL V E+AK I Y + IKTSWTPP ++ S+SEE + +R + I+ EG+ IPP + F +M+ P L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++FCLEQE LPF EGP+GLII PSRELA QTH I+ + ++ S P L LCIGG S KEQ + R+G VH++VATPGRL+DLL+KK SL++CRYL LDEADRMIDMGFE +IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++I+ F++G+KDVLVATDVA KGLDFP I+HVINYDMP++IE YVHRIGRTGR G+ATTFINK+C+ES+L+DLK LL EA Q P L + + + D G+ GC++CGGLGHRI CPK E++Q +Q +IGRK+ +H+S D+ Sbjct: 85 EDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQED--SSPLLRCALCIGGMSVKEQMETIRHG-VHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF 633
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Mouse
Match: Ddx23 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:MGI Symbol;Acc:MGI:1921601]) HSP 1 Score: 274.633 bits (701), Expect = 1.741e-81 Identity = 167/442 (37.78%), Postives = 250/442 (56.56%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCL-QKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEA 1654 ++ +++ + ++ R+ I +G IP + + D LP L V+ G K PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q R R G +V+ATPGRLID+LE + L+ C Y+VLDEADRMIDMGFE +++ + + +H+ RQT++F+ATMP +++ A+S L +P VV +G AG + + Q V + K ++LL L Q PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + V+NYDM +IE Y+HRIGRTGR K GVA TF+ K + ++ +LK + E+ Sbjct: 361 LDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEESDQGPYAIILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG-CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE-DSAVFYELKQAILES 785
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Mouse
Match: Ddx5 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]) HSP 1 Score: 256.529 bits (654), Expect = 2.069e-76 Identity = 157/425 (36.94%), Postives = 231/425 (54.35%), Query Frame = 2 Query: 446 SEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSAL-------VKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLD-CLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA-TPEFLLAIE 1690 + + + R + I G N P +L F + P ++V+ + PTAIQ QG PVAL+G DM+G+A TGSGKTL + LP ++ Q PF++ +GP L++ P+RELA Q ++ + +L + CI G + K R GV + +ATPGRLID LE +L YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L + + ++ +++ DVE + KL RL++ + + + I+F E K D + + G A IH Q+ER ++ FK G+ +L+ATDVA +GLD ++ VINYD P+ E Y+HRIGRT R K G A TF + N + DL +L+EANQA P+ L +E Sbjct: 69 TAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRAC--------RLKST-CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVE---KDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPN-NIKQVSDLISVLREANQAINPKLLQLVE 476
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Mouse
Match: D1Pas1 (DNA segment, Chr 1, Pasteur Institute 1 [Source:MGI Symbol;Acc:MGI:91842]) HSP 1 Score: 250.366 bits (638), Expect = 1.098e-73 Identity = 162/445 (36.40%), Postives = 241/445 (54.16%), Query Frame = 2 Query: 485 IIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLV--LFCLEQEMSLPFVDNEGPFG--------LIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAV---LCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF----RHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPP--VIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGLEDSQGDIGCSYCGGLGHR 1756 + A G N PP + F D+ + + + +++ PT +Q +P+ RD++ A TGSGKT F LP++ ++ +L + G +G L++ P+RELA Q I +E + F + V + GG +Q R G H++VATPGRL+D++E+ L+ C+YLVLDEADRM+DMGFE +IR + + R T++FSAT P++IQ A+ L + + + VGR G+ + NI Q V +V+ K LLD L T +++F E K D + ++L +G SIH Q +R ++ F+ G+ +LVAT VA +GLD ++HVIN+D+P DIE YVHRIGRTGR G+AT+F N+ N +I DL LL EA Q P +L +A E S+G + GG G R Sbjct: 167 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQ-----------IYEEARKFSYRSRVRPCVVYGGADIGQQI-RDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER-NINITKDLLDLLVEAKQEVPSWLENMAFEHHYKGGSRGRSKSRFSGGFGAR 598
BLAST of ATP-dependent RNA helicase abstrakt vs. UniProt/SwissProt
Match: sp|Q9V3C0|DDX41_DROME (ATP-dependent RNA helicase abstrakt OS=Drosophila melanogaster OX=7227 GN=abs PE=1 SV=1) HSP 1 Score: 626.706 bits (1615), Expect = 0.000e+0 Identity = 322/539 (59.74%), Postives = 404/539 (74.95%), Query Frame = 2 Query: 242 LIEHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGLEDSQGDI-GCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKE--SHASADY 1843 L +H K +E KLS +EKQ E++I+ +IA++ AL GVAE+AK I Y + IKT+W PP +I +SEE + +R + RI+ EGE P + F +M+ PK LN L KGIKNPT IQ+QGLP L GRD+IGIA TGSGKTLVF LP+++F LEQE SLPF NEGP+GLII PSRELA QTH+II S + + P++ + L +GG E D G VH+VVATPGRL+D+L+KK +L+MCRYL +DEADRMIDMGFEE++RT+FS+F+ QRQTLLFSATMP+KIQ FA+SALVKPV +NVGRAGAA++N+ Q VEYVK E K+ LLDCLQKT PPV+IF E+K +VD IHEYLL+KGV+A +IH G QEER R++D ++ G+KDVLVATDVA KGLDFP ++HVINYDMPDDIE YVHRIGRTGR +G+ATT INK+ +S+LLDLK LL E Q P+FL LA ET+ GD GC+YCGGLGHRI CPK E++QN+QA +IGR++ S+ +ADY Sbjct: 84 LDQHTELKKIAEAKKLSAVEKQLREEEKIMESIAQQKALMGVAELAKGIQYEQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHL--QACGMPEIRSCLAMGGLPVSEALDVISRG-VHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQHLDLGDSHGCTYCGGLGHRITECPKLEAVQNKQASNIGRRDYLSNTAADY 619
BLAST of ATP-dependent RNA helicase abstrakt vs. UniProt/SwissProt
Match: sp|Q91VN6|DDX41_MOUSE (Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus OX=10090 GN=Ddx41 PE=1 SV=2) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 322/552 (58.33%), Postives = 412/552 (74.64%), Query Frame = 2 Query: 203 NDSVVKGPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIET--QGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKE--SHASADY 1843 D + GP+ +L+ +H H + +E K S EKQ E++IL ++AE AL V E+AK I Y + IKTSWTPP ++ S+SEE + +R + I+ EG+ IPP + F +M+ P L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++FCLEQE LPF EGP+GLII PSRELA QTH I+ + ++ S P L LCIGG S KEQ + R+G VH++VATPGRL+DLL+KK SL++CRYL LDEADRMIDMGFE +IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++I+ F++G+KDVLVATDVA KGLDFP I+HVINYDMP++IE YVHRIGRTGR G+ATTFINK+C+ES+L+DLK LL EA Q P L + + + D G+ GC++CGGLGHRI CPK E++Q +Q +IGRK+ +H+S D+ Sbjct: 74 EDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQED--SSPLLRCALCIGGMSVKEQMETIRHG-VHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF 622
BLAST of ATP-dependent RNA helicase abstrakt vs. UniProt/SwissProt
Match: sp|Q9UJV9|DDX41_HUMAN (Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens OX=9606 GN=DDX41 PE=1 SV=2) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 322/552 (58.33%), Postives = 412/552 (74.64%), Query Frame = 2 Query: 203 NDSVVKGPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIET--QGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKE--SHASADY 1843 D + GP+ +L+ +H H + +E K S EKQ E++IL ++AE AL V E+AK I Y + IKTSWTPP ++ S+SEE + +R + I+ EG+ IPP + F +M+ P L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++FCLEQE LPF EGP+GLII PSRELA QTH I+ + ++ S P L LCIGG S KEQ + R+G VH++VATPGRL+DLL+KK SL++CRYL LDEADRMIDMGFE +IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++I+ F++G+KDVLVATDVA KGLDFP I+HVINYDMP++IE YVHRIGRTGR G+ATTFINK+C+ES+L+DLK LL EA Q P L + + + D G+ GC++CGGLGHRI CPK E++Q +Q +IGRK+ +H+S D+ Sbjct: 74 EDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQED--SSPLLRCALCIGGMSVKEQMETIRHG-VHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF 622
BLAST of ATP-dependent RNA helicase abstrakt vs. UniProt/SwissProt
Match: sp|Q9LU46|RH35_ARATH (DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana OX=3702 GN=RH35 PE=2 SV=1) HSP 1 Score: 555.058 bits (1429), Expect = 0.000e+0 Identity = 291/514 (56.61%), Postives = 365/514 (71.01%), Query Frame = 2 Query: 317 EDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAI-----ETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 1843 E E++ ++++K L V E+AK I Y E + T W PP I +S + LIR Q II G++IPP + F DM+ P+P L+ LK KGI PT IQ+QGLPV L GRDMIGIA TGSGKTLVF LP+++ L++EM +P EGP GLI+ PSRELA QT++++ + + +P L ++LCIGG + Q + + G VH+VVATPGRL D+L KK SL+ CRYL LDEADR++D+GFE++IR VF +F+ QRQTLLFSATMP KIQ FA+SALVKPV VNVGRAGAANL++ Q+VEYVK E K+ LL+CLQKT PPV+IF E K++VD IHEYLL+KGV+A +IH G QE+R +I FK G+KDVLVATDVA KGLDFP I+HVINYDMP +IE YVHRIGRTGR K G+ATTFINK+ +E+ LLDLK LLQEA Q P L + E + + ++ G GC+YCGGLGHRI CPK E Q A RK+ S Y Sbjct: 78 EKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAG--YPPLRSLLCIGGIDMRSQLEVVKRG-VHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETIANASGVKGCAYCGGLGHRIRDCPKLEH-QKSVAISNSRKDYFGSGGY 587
BLAST of ATP-dependent RNA helicase abstrakt vs. UniProt/SwissProt
Match: sp|Q9SZB4|RH43_ARATH (Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana OX=3702 GN=RH43 PE=3 SV=1) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 292/530 (55.09%), Postives = 376/530 (70.94%), Query Frame = 2 Query: 278 EDKLSELEKQKNIEDE---ILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAI-----ETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 1843 E++L+++ K+K +E+ ++ ++++K L V E+A+ I Y E + T W PP + +S + M LIR Q I GE+IPP + F DM+ P P L +LK KGI +PT IQ+QGLPV L+GRDMIGIA TGSGKTLVF LP+++ L++E+ +P EGP L+I PSRELA QT+ ++ + ++ +P+L ++LCIGG + Q D + G VH+VVATPGRL D+L KK SL+ CR L LDEADR++D+GFE++IR VF +F+ QRQTLLFSATMP KIQ FA SALVKPV VNVGRAGAANL++ Q+VEYVK E K+ LL+CLQKT PPV+IF E K++VD IHEYLL+KGV+A +IH G QE+R +I FK G+KDVLVATDVA KGLDFP I+HVINYDMP +IE YVHRIGRTGR K G+ATTFINK+ +E LLDLK LLQEA Q P L + ET+ + ++ G GC+YCGGLGHRI+ CPK E Q A RK+ S Y Sbjct: 14 EERLAQM-KRKVVEEPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQMDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDG--YPRLRSLLCIGGVDMRSQLDVVKKG-VHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRILQCPKFEH-QKSVAISSSRKDHFGSDGY 538
BLAST of ATP-dependent RNA helicase abstrakt vs. TrEMBL
Match: A0A1S8WJW0 (DEAD/DEAH box helicase OS=Opisthorchis viverrini OX=6198 GN=X801_09489 PE=3 SV=1) HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0 Identity = 333/544 (61.21%), Postives = 423/544 (77.76%), Query Frame = 2 Query: 221 GPKGKGTLIEHIHQ-SKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 1843 GP +G+L + + + K +EE K +E +K+ +E +IL ++AEKTAL GVAE+AK I Y + I+T WTPPS+I ++E IR + RI+ +GE++PP + F +MR P +N+LK +GI +PT IQMQGLP L+GRDMIGIA TGSGKT+VFA+P+VLFC++QE+ +PF+ EGP+GLI+GPSRELA QTH++++ L DG+ FP++ LCIGGT+ K+Q + FR GVH++VATPGRLIDLL++K F+L +CRYLVLDEADRMIDMGFEEE+RT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV VNVGRAGAA++N+ Q+VEYVKHE K+ LL LQKT PPVIIF E+K +VD IHEYLL+KGV+A SIH G QE+R+ ++ F+ +DVLVATDVA KGLDFP I HVINYDMP+DIE YVHRIGRTGR KRG+ATTFINKS +ES LLDLK LL EANQ P+FL L T+ + G++GC+YCGGLGHRI CPK E++QN+ A +GRK+ SADY Sbjct: 104 GPHAQGSLFDRMWELKKKAEERKETERDKKLKVEAKILESVAEKTALMGVAELAKGIQYDKPIQTGWTPPSYIREQTQEKSDEIRKKHRILIDGEDVPPPIRNFIEMRFPAALVNILKARGISSPTPIQMQGLPAVLSGRDMIGIAFTGSGKTMVFAIPIVLFCMDQELKIPFIPGEGPYGLILGPSRELARQTHEVLSSLVDGLVA--AGFPEIRCNLCIGGTAVKDQAETFRRSGVHILVATPGRLIDLLQRKIFNLEVCRYLVLDEADRMIDMGFEEEVRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASMNVSQEVEYVKHEAKIPHLLQALQKTPPPVIIFAERKQDVDAIHEYLLLKGVEAVSIHGGKDQEDRVAAVTEFRAKHRDVLVATDVASKGLDFPYINHVINYDMPEDIENYVHRIGRTGRGHKRGLATTFINKSVDESTLLDLKHLLIEANQRVPDFLVELVSATEHELEMGGEVGCAYCGGLGHRITHCPKLEAMQNKAARSLGRKDFLPSADY 645
BLAST of ATP-dependent RNA helicase abstrakt vs. TrEMBL
Match: G7Y9F3 (ATP-dependent RNA helicase DDX41 OS=Clonorchis sinensis OX=79923 GN=CLF_103261 PE=4 SV=1) HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0 Identity = 333/544 (61.21%), Postives = 423/544 (77.76%), Query Frame = 2 Query: 221 GPKGKGTLIEHIHQ-SKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 1843 GP +G+L + + + K +EE K +E +K+ +E +IL ++AEKTAL GVAE+AK I Y + I+T WTPPS+I ++E IR + RI+ +GE++PP + F +MR P +++LK +GI NPT IQMQGLP L+GRDMIGIA TGSGKT+VFA+P+VLFC++QE+ +PF+ EGP+GLI+GPSRELA QTH++++ L DG+ FP++ LCIGGT+ K+Q + FR GVH++VATPGRLIDLL++K F+L +CRYLVLDEADRMIDMGFEEE+RT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV VNVGRAGAA++N+ Q+VEYVKHE K+ LL LQKT PPVIIF E+K +VD IHEYLL+KGV+A SIH G QE+R+ ++ F+ +DVLVATDVA KGLDFP I HVINYDMP+DIE YVHRIGRTGR KRG+ATTFINKS +ES LLDLK LL EANQ P+FL L T+ + G++GC+YCGGLGHRI CPK E++QN+ A +GRK+ SADY Sbjct: 802 GPHAQGSLFDRMWELKKKAEERKETERDKKLKVEAKILESVAEKTALMGVAELAKGIQYDKPIQTGWTPPSYIREQTQEKSDEIRKKHRILIDGEDVPPPIRNFIEMRFPVALVDILKARGISNPTPIQMQGLPAVLSGRDMIGIAFTGSGKTMVFAIPIVLFCMDQELKIPFIPGEGPYGLILGPSRELARQTHEVLSSLVDGLVA--AGFPEIRCNLCIGGTAVKDQAETFRRSGVHILVATPGRLIDLLQRKIFNLEVCRYLVLDEADRMIDMGFEEEVRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASMNVSQEVEYVKHEAKIPHLLQALQKTPPPVIIFAERKQDVDAIHEYLLLKGVEAVSIHGGKDQEDRVAAVTEFRAKHRDVLVATDVASKGLDFPYINHVINYDMPEDIENYVHRIGRTGRGHKRGLATTFINKSVDESTLLDLKHLLIEANQRVPDFLVELVSATEHELEMGGEVGCAYCGGLGHRITHCPKLEAMQNKAARSLGRKDFLPSADY 1343
BLAST of ATP-dependent RNA helicase abstrakt vs. TrEMBL
Match: A0A5J4NUJ0 (ATP-dependent RNA helicase DDX41 (Fragment) OS=Paragonimus westermani OX=34504 GN=DEA37_0000101 PE=3 SV=1) HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0 Identity = 334/544 (61.40%), Postives = 426/544 (78.31%), Query Frame = 2 Query: 221 GPKGKGTLIEHIHQ-SKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 1843 GP +G+L + + + K +EE K +E +K+ +E +IL ++AEKTAL GVAE+AK I Y + I+TSWTPPS+I SEE + IR + RI+ +G+++P + F +MRLP +++LK +GI NPT IQMQGLP L+GRDMIGIA TGSGKT+VF++P+VLF ++QE +PF+ +EGP+GLI+GPSRELA QTH+++ L DG+ K +P + LCIGGT+ K+Q D FR GVH++VATPGRLIDLL++K F+L +CRYLVLDEADRMIDMGFEEE+RT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV VNVGRAGAA++N+ Q+VEYVKHE K+ LL+ LQKT PPVIIF E+K +VD IHEYLL+KGV+A SIH G QEER+ ++ F+ +DVLVATDVA KGLDFP I HVINYDMP+DIE YVHRIGRTGR +RG+ATTFINKS +ES LLDLK LL EANQ P+FL L T+ + G++GC+YCGGLGHRI CPK E++QN+ A ++GRK+ +SADY Sbjct: 84 GPNAQGSLFDRMWELKKKAEERKETERDKKLKVEAKILESVAEKTALMGVAELAKGIQYDKPIQTSWTPPSYIREQSEEKSEEIRRKYRILIDGDDVPAPIRHFIEMRLPSALVDILKTRGISNPTPIQMQGLPAVLSGRDMIGIAFTGSGKTMVFSIPVVLFSMDQEQKIPFIPSEGPYGLILGPSRELARQTHEVLCSLVDGLVK--AGYPPIRCSLCIGGTAVKDQADAFRRSGVHILVATPGRLIDLLQRKIFNLEVCRYLVLDEADRMIDMGFEEEVRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASMNVSQEVEYVKHEAKIPHLLNALQKTSPPVIIFAERKQDVDAIHEYLLLKGVEAVSIHGGKDQEERVAAVSEFRAKHRDVLVATDVASKGLDFPDINHVINYDMPEDIENYVHRIGRTGRGHQRGLATTFINKSVDESTLLDLKHLLIEANQRVPDFLVELVSATEHELEMGGEVGCAYCGGLGHRITHCPKLEAMQNKAAGNLGRKDFLSSADY 625
BLAST of ATP-dependent RNA helicase abstrakt vs. TrEMBL
Match: A0A4S2LX91 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_004240 PE=3 SV=1) HSP 1 Score: 672.159 bits (1733), Expect = 0.000e+0 Identity = 334/544 (61.40%), Postives = 423/544 (77.76%), Query Frame = 2 Query: 221 GPKGKGTLIEHIHQ-SKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 1843 GP +G+L + + + K +EE K +E +K+ +E +IL ++AEKTAL GVAE+AK I Y + I+T WTPPS+I ++E IR + RI+ +GE++PP + F +MR P +++LK +GI NPT IQMQGLP L+GRDMIGIA TGSGKT+VFA+P+VLFC++QE+ +PF+ EGP+GLI+GPSRELA QTH+++T L DG+ FP++ LCIGGT+ K+Q + FR GVH++VATPGRLIDLL++K F+L +CRYLVLDEADRMIDMGFEEE+RT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV VNVGRAGAA++N+ Q+VEYVKHE K+ LL LQKT PPVIIF E+K +VD IHEYLL+KGV+A SIH G QE+R+ ++ F+ +DVLVATDVA KGLDFP I HVINYDMP+DIE YVHRIGRTGR KRG+ATTFINKS +ES LLDLK LL EANQ P+FL L T+ + G++GC+YCGGLGHRI CPK E++QN+ A +GRK+ SADY Sbjct: 143 GPHAQGSLFDRMWELKKKAEERKETERDKKLKVEAKILESVAEKTALMGVAELAKGIQYDKPIQTGWTPPSYIREQTQEKSDEIRRKHRILIDGEDVPPPIRNFIEMRFPVALVDILKARGISNPTPIQMQGLPAVLSGRDMIGIAFTGSGKTMVFAIPIVLFCMDQELKIPFIPGEGPYGLILGPSRELARQTHEVLTSLVDGLVA--AGFPEIRCNLCIGGTAVKDQAETFRRSGVHILVATPGRLIDLLQRKIFNLEVCRYLVLDEADRMIDMGFEEEVRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASMNVSQEVEYVKHEAKIPHLLQALQKTPPPVIIFAERKQDVDAIHEYLLLKGVEAVSIHGGKDQEDRVAAVTEFRAKHRDVLVATDVASKGLDFPYINHVINYDMPEDIENYVHRIGRTGRGHKRGLATTFINKSVDESTLLDLKHLLIEANQRVPDFLVELVSATEHELEMGGEVGCAYCGGLGHRITHCPKLEAMQNKAARSLGRKDFLPSADY 684
BLAST of ATP-dependent RNA helicase abstrakt vs. TrEMBL
Match: A0A419PL23 (ATP-dependent RNA helicase abstrakt OS=Clonorchis sinensis OX=79923 GN=abs PE=3 SV=1) HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0 Identity = 333/544 (61.21%), Postives = 423/544 (77.76%), Query Frame = 2 Query: 221 GPKGKGTLIEHIHQ-SKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFL--LAIETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 1843 GP +G+L + + + K +EE K +E +K+ +E +IL ++AEKTAL GVAE+AK I Y + I+T WTPPS+I ++E IR + RI+ +GE++PP + F +MR P +++LK +GI NPT IQMQGLP L+GRDMIGIA TGSGKT+VFA+P+VLFC++QE+ +PF+ EGP+GLI+GPSRELA QTH++++ L DG+ FP++ LCIGGT+ K+Q + FR GVH++VATPGRLIDLL++K F+L +CRYLVLDEADRMIDMGFEEE+RT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV VNVGRAGAA++N+ Q+VEYVKHE K+ LL LQKT PPVIIF E+K +VD IHEYLL+KGV+A SIH G QE+R+ ++ F+ +DVLVATDVA KGLDFP I HVINYDMP+DIE YVHRIGRTGR KRG+ATTFINKS +ES LLDLK LL EANQ P+FL L T+ + G++GC+YCGGLGHRI CPK E++QN+ A +GRK+ SADY Sbjct: 148 GPHAQGSLFDRMWELKKKAEERKETERDKKLKVEAKILESVAEKTALMGVAELAKGIQYDKPIQTGWTPPSYIREQTQEKSDEIRKKHRILIDGEDVPPPIRNFIEMRFPVALVDILKARGISNPTPIQMQGLPAVLSGRDMIGIAFTGSGKTMVFAIPIVLFCMDQELKIPFIPGEGPYGLILGPSRELARQTHEVLSSLVDGLVA--AGFPEIRCNLCIGGTAVKDQAETFRRSGVHILVATPGRLIDLLQRKIFNLEVCRYLVLDEADRMIDMGFEEEVRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASMNVSQEVEYVKHEAKIPHLLQALQKTPPPVIIFAERKQDVDAIHEYLLLKGVEAVSIHGGKDQEDRVAAVTEFRAKHRDVLVATDVASKGLDFPYINHVINYDMPEDIENYVHRIGRTGRGHKRGLATTFINKSVDESTLLDLKHLLIEANQRVPDFLVELVSATEHELEMGGEVGCAYCGGLGHRITHCPKLEAMQNKAARSLGRKDFLPSADY 689
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Cavefish
Match: DDX41 (DEAD-box helicase 41 [Source:NCBI gene;Acc:103035623]) HSP 1 Score: 604.749 bits (1558), Expect = 0.000e+0 Identity = 317/546 (58.06%), Postives = 406/546 (74.36%), Query Frame = 2 Query: 221 GPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIET--QGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY*F 1849 GP+ +L+ +H H + +E K S EKQ E++IL ++AE AL V E+AK I Y + IKTSW P +I S+ + + +R + I+ EG+ IP + F +M+ P+ L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++FCLEQE LPF EGP+GLII PSRELA QTH II + E++ P++ + LCIGG S KEQ + ++G VH++VATPGRL+DLL KK SL++CRYL LDEADRMIDMGFEE+IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKP+ +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++I+ FK+G+KDVLVATDVA KGLDFP I+HVINYDMP++IE YVHRIGRTGR K GVATTFINK C ES+L+DLK LL EA Q P L ++T + + D G+ GC++CGGLGHRI CPK E++Q RQ +I R++ A++ F Sbjct: 72 GPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYEDPIKTSWKAPRYILSMPKARHERVRKKYHILVEGDGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSRELARQTHSIIEYYCKLL--EDEGAPQMRSALCIGGMSVKEQMEVVKHG-VHMMVATPGRLMDLLNKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGKTGVATTFINKGCEESVLMDLKALLVEAKQKVPLPLQVLQTGDEAMLDIGGERGCAFCGGLGHRITDCPKLETMQTRQVANISRRDCLANSSMDF 614
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Cavefish
Match: DDX41 (DEAD-box helicase 41 [Source:NCBI gene;Acc:103035623]) HSP 1 Score: 557.37 bits (1435), Expect = 0.000e+0 Identity = 297/503 (59.05%), Postives = 377/503 (74.95%), Query Frame = 2 Query: 221 GPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDIG 1726 GP+ +L+ +H H + +E K S EKQ E++IL ++AE AL V E+AK I Y + IKTSW P +I S+ + + +R + I+ EG+ IP + F +M+ P+ L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++FCLEQE LPF EGP+GLII PSRELA QTH II + E++ P++ + LCIGG S KEQ + ++G VH++VATPGRL+DLL KK SL++CRYL LDEADRMIDMGFEE+IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKP+ +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++I+ FK+G+KDVLVATDVA KGLDFP I+HVINYDMP++IE YVHRIGRTGR K GVATTFINK C ES+L+DLK LL EA Q P L ++T +++ DIG Sbjct: 72 GPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYEDPIKTSWKAPRYILSMPKARHERVRKKYHILVEGDGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSRELARQTHSIIEYYCKLL--EDEGAPQMRSALCIGGMSVKEQMEVVKHG-VHMMVATPGRLMDLLNKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGKTGVATTFINKGCEESVLMDLKALLVEAKQKVPLPLQVLQTG--DEAMLDIG 569
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Cavefish
Match: ddx23 (DEAD-box helicase 23 [Source:NCBI gene;Acc:103037499]) HSP 1 Score: 274.633 bits (701), Expect = 1.436e-81 Identity = 168/446 (37.67%), Postives = 252/446 (56.50%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQAT 1666 ++ +++ + ++ R+ I +G IP + + + LP L V+ G K PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q R R G +V+ATPGRLID+LE + L C Y+VLDEADRMIDMGFE +++ + Y +H+ RQT++F+ATMP +++ A+S L + VV +G AG + + Q V + K ++LL+ L + +PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + V+NYDM +IE Y+HRIGRTGR K GVA TF+ K + S+ DLK + E+ +T Sbjct: 355 LDEMTDRDWRIFREDYSITTKGGKIPNPIRNWKEFDLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDSDQGPYAVILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG-CEIVIATPGRLIDVLENRYLVLGRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDEAEDPEKMTQNFESGKHKYRQTVMFTATMPPAVERLARSYLRRAAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLEVLSRGFEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKE-DSSVFYDLKQAILESPVST 783
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Cavefish
Match: DDX5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:103046784]) HSP 1 Score: 257.684 bits (657), Expect = 6.625e-77 Identity = 164/426 (38.50%), Postives = 236/426 (55.40%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDN-EGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXX-XXXXXXXXXXLNIRQDVEYV---KHEGKLQRLL-DCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA-TPEFLLAIE 1690 I S + ++ R + + +G + P +++F + P + V+ + PT IQ QG P+AL+G+DM+GIA TGSGKTL + LP ++ Q PF+++ +GP L++ P+RELA Q ++ + G KS CI G + K R GV + +ATPGRLID LE +L C YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L + V +AN NI Q V+ + + KL RLL + + + + IIF E K D + + G A IH Q+ER ++ FK G+ +L+ATDVA +GLD ++ VINYD P+ E Y+HRIGRT R +K G A TF + N DL +L+EANQA P+ L E Sbjct: 65 ITRRSMQEVEQYRRAKEVTVKGRDCPKPVMKFNEATFPNYVMEVINKQAWSEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQ----PFLEHGDGPICLVLAPTRELAQQVQQVAAEY--GRASRLKS-------TCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINIGALQLSANHNILQIVDVCNDGEKDDKLIRLLEEIMSEKENKTIIFVETKRRCDELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKACILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPN-NMKQANDLISVLREANQAINPKLLQMAE 476
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Cavefish
Match: ddx5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:103024726]) HSP 1 Score: 255.373 bits (651), Expect = 4.302e-76 Identity = 161/416 (38.70%), Postives = 233/416 (56.01%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXX-XXXXXXXXXXLNIRQDVEYV---KHEGKLQRLL-DCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA 1663 + + + ++ R + I +G P ++RF + P ++V+ + +PT IQ QG P+AL+G+DM+GIA TGSGKTL + LP ++ Q PF++ +GP L++ P+RELA Q ++ + G KS CI G + K R GV + +ATPGRLID LE +L C YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L + V +AN NI Q V+ + E KL RLL + + + + IIF E K D + + G A IH Q+ER ++ FK G+ +L+ATDVA +GLD ++ VIN+D P++ E Y+HRIGRT R +K G A TF + N DL +L+EANQA Sbjct: 67 VGRRTPQEVEQYRRSKEITVKGRECPKPVMRFHESNFPSYVMDVISKQNWTDPTPIQAQGWPLALSGQDMVGIAQTGSGKTLSYLLPAIVHINHQ----PFLERGDGPICLVLAPTRELAQQVQQVAAEY--GRASRLKS-------TCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINVGALQLSANHNILQIVDVCNDGEKEDKLLRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPN-NMKQAHDLVSVLREANQA 468
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Sea Lamprey
Match: ddx23 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]) HSP 1 Score: 273.092 bits (697), Expect = 2.988e-82 Identity = 169/451 (37.47%), Postives = 251/451 (55.65%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLK--LLLQEANQATPEF 1675 + + E + ++ R+ I +G IP + + + LP V++ G K+PT IQ Q +P+ L RD+IGIA TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q R R G +V+ATPGRLID+LE + L+ C Y+VLDEADRMIDMGFE +++ + + RH+ RQT++F+ATMP +++ A+S L +P VV +G G + Q V + K ++LL+ L + +PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + V+NYDM +IE Y HRIGRTGR K GV+ TF+ K + ++ DLK +L +Q PE Sbjct: 291 LEEMCERDWRIFREDYNITTKGGKIPNPIRLWKESILPSHIREVIEKCGYKDPTPIQRQAIPIGLQNRDIIGIAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDTDQGPYAVILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMG-CKIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQRILEHMPVSNQKPDTDDAEDPDKMTANFESGRHKYRQTVMFTATMPAAVERLARSYLRRPAVVYIGSVGKPIERVEQRVFIMGESEKRKKLLELLSRGFEPPIIIFVNQKKGCDVLAKSLEKMGFNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVLNYDMAKNIEDYTHRIGRTGRAGKSGVSVTFLTKE-DAAVFYDLKQAMLGSPVSQCPPEL 724
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Sea Lamprey
Match: DDX41 (DEAD-box helicase 41 [Source:HGNC Symbol;Acc:HGNC:18674]) HSP 1 Score: 234.958 bits (598), Expect = 3.383e-74 Identity = 123/193 (63.73%), Postives = 157/193 (81.35%), Query Frame = 2 Query: 1148 KSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDIG 1726 +SALV PV +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQK+ PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++++ F++G+KDVLVATDVA KGLDFP I+HVINYDMP++IE YVHRIGRTGR K G+ATTFINKSC+ES+L+DLK LL EA Q P L ++T ++S DIG Sbjct: 1 RSALVLPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKSSPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAMESFREGKKDVLVATDVASKGLDFPNIQHVINYDMPEEIENYVHRIGRTGRSGKTGIATTFINKSCDESVLMDLKALLMEAKQKVPPVLQLLQTG--DESMLDIG 191
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003898.1 (pep scaffold:Pmarinus_7.0:GL481305:13824:21767:-1 gene:ENSPMAG00000003524.1 transcript:ENSPMAT00000003898.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 243.047 bits (619), Expect = 5.683e-73 Identity = 160/444 (36.04%), Postives = 234/444 (52.70%), Query Frame = 2 Query: 491 AEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCL-------------EQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAV---LCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSY----FRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT--KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDIGCSYCGGLGHR 1756 A G + PP + F ++ L + ++ + + + PT +Q +P+ RD++ A TGSGKT F LP++ +QE + P L++ P+RELA Q I E + F + V + GG Q + G H++VATPGRL+D++E+ L+ CRYLVLDEADRM+DMGFE +IR + + RQTL+FSAT P++IQ A+ L + + VGR G+A+ NI Q V +V+ K LLD L T ++F E K D + +L +G SIH Q +R ++ F+ G++ +LVAT VA +GLD P ++HVIN+D+P DIE YVHRIGRTGR G AT+F N+ NE++ +L LL EA+Q P +L + + + GG G R Sbjct: 49 ATGNDCPPHIESFHELELGEIIMSSVTLCRYERPTPVQKYAIPIIKAKRDLMACAQTGSGKTAAFLLPILSQIYSGGPGKVVEDTKNQQETVKYGQRKQYPMSLVLAPTRELALQ-----------IYDEARKFAYRSCVRPCVVYGGADIGNQVRELQKG-CHLLVATPGRLVDMMERGKVGLDHCRYLVLDEADRMLDMGFEPQIRRIVEQDVMPTKGDRQTLMFSATFPKEIQILARDFLEDYIFLAVGRVGSASENITQKVVWVEEMDKRSFLLDLLNATGRDSLTLVFVETKKGADALQGFLCSEGYSCTSIHGDRSQRDREEALSLFRTGRRPILVATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGQATSFYNEK-NENMTRELLHLLVEAHQEVPSWLETMAQEHRSKPARGRPKRFAGGFGGR 479
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Sea Lamprey
Match: ddx42 (DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]) HSP 1 Score: 238.039 bits (606), Expect = 2.804e-69 Identity = 160/428 (37.38%), Postives = 231/428 (53.97%), Query Frame = 2 Query: 512 PCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVE-YVKHEGKLQRLLDCLQK--TKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQG-------LEDSQGDIGCSYCGGLGHR 1756 PC FG + LN+++ PT IQ QG+P+AL+GRD+IGIA TGSGKT F P+++ + Q+ P +GP GLI P+REL Q IN E K F K L +V GG S EQ + G +VV TPGRLID ++KK+ +L YLV DEADRM DMGFE ++R++ ++ R RQT+L+SAT ++++ A+ L+ P+ V G G AN ++ Q VE + K L L + + V+IF +K + + L +G +H M Q ER + I FK+ ++VATDVA +GLD P I+ V+NYD+ DI+ + HR+GRTGR ++G A T + + + DL L+ ANQ + L+ + Q + +G GGLG+R Sbjct: 247 PCS-SFGHFGFDEQLLNLIRKSEFTQPTPIQCQGIPIALSGRDIIGIAKTGSGKTASFIWPMLVHIMAQKELKP---GDGPIGLICVPTRELCQQ-----------INVECKRFGKAYNLHSVAVYGGGSMWEQAKALQEG-AEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTMLYSATFRMRVEKLARDILIDPIRVVQGDIGEANEDVTQRVEIFSNGAAKWNWLCSHLVEFTSSGSVLIFVTRKDNSEELSNDLEQEGFQVGLLHGDMDQSERNKVISDFKKKVIPIMVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRVGRTGRAGEKGTAFTLMTHK-DMNFAGDLVRNLEGANQHVHKELMDLAMQNPWFRKTRFKGGRGRKLNVGGGGLGYR 657
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Sea Lamprey
Match: ddx46 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:NCBI gene;Acc:321948]) HSP 1 Score: 240.35 bits (612), Expect = 1.220e-68 Identity = 148/399 (37.09%), Postives = 218/399 (54.64%), Query Frame = 2 Query: 425 PSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTA--VLCI-GGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCR---YLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCL--QKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFI 1597 P +EE + + ++ +G+ P + + + LN LK + + PT IQ Q +P ++GRD+IGIA TGSGKT+ F LP+ ++Q P + EGP G+I+ P+RELA Q I KE + F K A V+C+ GGT EQ + G ++V TPGR+ID+L S + R Y+VLDEADRM DMGFE ++ + R RQT++FSAT PR ++ A+ L KPV V VG ++ Q V ++ + K +LL+ L + K VI+F +++ D + + L+ S+H G+ Q +R I+ FK G ++VAT VA +GLD + V+NYD P+ E YVHR+GRTGR +G + TFI Sbjct: 337 PELAKMTAEEVSAYRLEMEGVMVKGKGCPKPIKTWVQCGISMKILNTLKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIGFLLPMFRHVMDQR---PLEEGEGPIGVIMTPTRELALQ-----------IAKECRKFTKQLALRVVCVYGGTGISEQIAELKRGA-EIIVCTPGRMIDMLAANSGRVTNFRRATYMVLDEADRMFDMGFEPQVMRIIETSRPDRQTVMFSATFPRAMEALARRILNKPVEVQVGGRSVVCSDVEQHVIVIEEDTKFYKLLELLGLYQEKGAVIVFVDKQEHADTLLKDLMKASYPCLSLHGGIDQYDRDSIINDFKSGVCRLMVATSVAARGLDVKHLIMVVNYDCPNHYEDYVHRVGRTGRAGNKGYSYTFI 720
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Yeast
Match: DBP2 (ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; interacts with YRA1; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites [Source:SGD;Acc:S000005056]) HSP 1 Score: 268.47 bits (685), Expect = 1.109e-82 Identity = 167/426 (39.20%), Postives = 229/426 (53.76%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAV--LCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKP-XXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCL----QKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIE 1690 + S+ + R + + G +IP + F + P LN +K +G PT IQ QG P+AL+GRDM+GIA+TGSGKTL + LP ++ Q + P +GP L++ P+RELA Q I E F + + C+ G K Q R + G +V+ATPGRLID+LE +L YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A L P V +A+ NI Q VE V K RL L Q + +IF K D I +YL G A +IH Q ER + F+ G+ ++VATDVA +G+D I +VINYDMP +IE YVHRIGRTGR G A +F + N+ + L +++EANQ P LL + Sbjct: 84 VRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAP---GDGPIVLVLAPTRELAVQ-----------IQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQ-NKGLGAKLISIMREANQNIPPELLKYD 494
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Yeast
Match: DBP1 (Putative ATP-dependent RNA helicase of the DEAD-box protein family; mutants show reduced stability of the 40S ribosomal subunit scanning through 5' untranslated regions of mRNAs; protein abundance increases in response to DNA replication stress; DBP1 has a paralog, DED1, that arose from the whole genome duplication [Source:SGD;Acc:S000006040]) HSP 1 Score: 252.292 bits (643), Expect = 8.546e-76 Identity = 167/423 (39.48%), Postives = 229/423 (54.14%), Query Frame = 2 Query: 473 DQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQ------EMSLPFVDNEG-PFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAV---LCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFR----HQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQ-KTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQ 1696 D + A G+++P +L F L + + +K+ PT +Q +P+ GRD++ A TGSGKT F PL E + F +G P L++ P+RELA+Q I +E + F + V + GG Q R + G ++VATPGRL DLLE+ SL +YLVLDEADRM+DMGFE +IR + RQTL+FSAT P IQ A+ L + ++VGR G+ + NI Q + YV K LLD L + K +IF E K D + ++L+++ A +IH Q ER R++ FK D+LVAT VA +GLD P + HVINYD+P DI+ YVHRIGRTGR GVAT+F N S N++I+ L +L EANQ P FL + Q Sbjct: 138 DNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQ-----------IFEEARKFTYRSWVRPCVVYGGAPIGNQM-REVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLLSAEHKGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFN-SNNQNIVKGLMEILNEANQEVPTFLSDLSRQ 547
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Yeast
Match: DED1 (ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase; required for translation initiation of all yeast mRNAs; binds to mRNA cap-associated factors, and binding stimulates Ded1p RNA-dependent ATPase activity; mutation in human homolog DBY is associated with male infertility; human homolog DDX3X complements ded1 null mutation; DED1 has a paralog, DBP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005730]) HSP 1 Score: 247.669 bits (631), Expect = 3.686e-74 Identity = 167/439 (38.04%), Postives = 233/439 (53.08%), Query Frame = 2 Query: 485 IIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPF--------GLIIGPSRELASQTHKIITDLSDGINKENKSF---PKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRH----QRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQ-KTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDIGCSYCGGLGH 1753 + A G+++P + F L L +K+ PT +Q +P+ GRD++ A TGSGKT F P++ + S P +++G F +I+ P+RELA+Q I E K F + A + GG+ Q G ++VATPGRL DLLE+ SL +YLVLDEADRM+DMGFE +IR + +RQTL+FSAT P IQ A+ L + ++VGR G+ + NI Q V YV+++ K LLD L T +IF E K D + ++L+++ A +IH Q ER R++ F+ G +LVAT VA +GLD P + HVINYD+P D++ YVHRIGRTGR G+AT F N S N +I+ L +L EANQ P FL + + G S GG G Sbjct: 130 VDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPS-PQPESQGSFYQRKAYPTAVIMAPTRELATQ-----------IFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERG-CDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFN-SENSNIVKGLHEILTEANQEVPSFL----KDAMMSAPGSRSNSRRGGFGR 550
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Yeast
Match: DBP3 (RNA-Dependent ATPase, member of DExD/H-box family; involved in cleavage of site A3 within the ITS1 spacer during rRNA processing; not essential for growth, but deletion causes severe slow-growth phenotype [Source:SGD;Acc:S000003046]) HSP 1 Score: 224.557 bits (571), Expect = 2.473e-66 Identity = 141/391 (36.06%), Postives = 211/391 (53.96%), Query Frame = 2 Query: 590 PTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-RHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLN--IRQDVEYVKHEGKLQRLLDCLQK------TKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDIGCSY 1735 PT IQ P L+G+D++G+A TGSGKT F +P + + + G L+I P+RELASQ + + L+D + + GG EQ R + VVVATPGRL+DLL++ S L+ YLVLDEADRM++ GFEE+I+ + +RQTL+F+AT P+++++ A + + P+ V++G N I Q VE V GK ++LL+ L+K V+IF K E + L G + A+IH + Q++R ++++ FK G+ ++L+ATDVA +GLD P ++ VIN P +E YVHRIGRTGR + G A T + + + L +L ANQ PE L+ T + G + Sbjct: 135 PTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQ------KKRGIQVLVISPTRELASQIYDNLIVLTDKVG--------MQCCCVYGGVPKDEQ--RIQLKKSQVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQ-EKHLAGGLVNVLNGANQPVPEDLIKFGTHTKKKEHSAYGSFF 508
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Yeast
Match: PRP28 (RNA binding protein; involved in RNA isomerization at the 5' splice site and for exchange of U6 for U1 snRNA at the 5' splice site; similar to the RNA helicases of the DEAD-box family [Source:SGD;Acc:S000002651]) HSP 1 Score: 207.608 bits (527), Expect = 1.623e-59 Identity = 136/423 (32.15%), Postives = 234/423 (55.32%), Query Frame = 2 Query: 416 WTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRL-PKPALNVLKVKGIK--NPTAIQMQGLPVALT---GRDMIGIASTGSGKTLVFALPLVLFCLE---QEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF------RHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKH-EGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHE-YLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDL 1633 WT S ++ ++E + +++++ I+ +G + L + ++ + P+ L V+ ++ ++ +PT IQ +P RD +G+ASTGSGKTL F +P+++ + SL +D GP LI+ P+REL Q K ++ +KE+ K+ ++ +GG S +E + + G ++VATPGRLID LE + LVLDEAD+MID+GFE+++ + + RQTL+F+ATM I++ A + KPV +G + I+Q VEY + E K ++L + K PP+IIF K D++ E + + +H QE+R S+ F+ + +++AT+VA +GLD P + V+N+ + ++ Y+HRIGRTGR G A +F++ + +ES++ +L Sbjct: 138 WTEKS-LHEMNERDWRILKEDYAIVTKGGTVENPLRNWEELNIIPRDLLRVI-IQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIID--GPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISI--VGGHSLEEISFSL-SEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIVAKYDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIREL 553
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Nematostella
Match: EDO49247 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGX3]) HSP 1 Score: 586.26 bits (1510), Expect = 0.000e+0 Identity = 302/481 (62.79%), Postives = 373/481 (77.55%), Query Frame = 2 Query: 410 TSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA-TPEFLLAIETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHA--SADY 1843 SWTPP +I + +E ++ IR + I+ EG++IPP + F +M+ P+P L LK KGI +PT IQ+QGLP LTGRDMIGIA TGSGKTLVF LP+++F LEQE ++PF NEGP+G+I+ PSRELA QT ++IT S + E FP L LCIGG+S KEQ+D + G VH+VVATPGRL+DLL+K+ +L++CRYLVLDEADRMIDMGFEE++RT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV VNVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+KS+VD IHEYLL+KGV+A +IH QEER+ +I F QG KDVLVATDVA KGLDFP I+HVIN+DMP+DIE YVHRIGRTGR K GVATTFINKSC ES+LLDLK LL EA Q T L ++ + + GC+YCGGLGHRI CPK E+LQ++QA +IGR++ A SAD+ Sbjct: 10 ASWTPPRYILHMPKEKIERIRKKWHILVEGDDIPPPVKTFKEMKFPRPILAALKKKGITHPTPIQVQGLPAVLTGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEKAMPFQRNEGPYGMIVVPSRELARQTFEVITHFSRAL--EAHGFPSLRTNLCIGGSSIKEQSDAMKRG-VHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASLDVIQEVEYVKQEAKVVYLLECLQKTPPPVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVHRIGRTGRCGKTGVATTFINKSCEESVLLDLKHLLMEAKQKITRARSLQVDNEEYLGIGDERGCAYCGGLGHRITECPKLEALQSKQAGNIGRRDYLAAGSADW 487
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Nematostella
Match: EDO37956 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SE71]) HSP 1 Score: 292.738 bits (748), Expect = 4.763e-93 Identity = 164/396 (41.41%), Postives = 236/396 (59.60%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF---RHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTK-PPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSC 1609 ++ LS+E + IR + I EGE+ P + F D+ LP L K + PT IQMQ L ++GRD+IG+A TGSGKTL ++LPL C+ P + P LI+ P+REL Q ++++ D I +C GG QT R G VVVATPGRL+DL ++ + L+ YLV+DEADRM+ MG EE++R + RQTLL+SAT+P +++ A+SA++ P+ + VG G +++Q+V ++ H K Q+LL+ L+ T PPVI+FT VDY+ E L + A+ +HS PQ+ R + + F+ G+ D+LVATDVA +GLDFP++ HVINYD+PD IE Y+HR GRTGR G+AT+F+ C Sbjct: 11 VSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPL---CMLLRTKAPSNPGDTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNP-------VC-GGVPVSTQTIALREGA-DVVVATPGRLLDLCKRGALCLDKITYLVMDEADRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAVLNPITIQVGPGGLIAPSVQQNVVFLYHYQKPQKLLETLRTTPYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECYIHRCGRTGRIGHHGIATSFLTLDC 394
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Nematostella
Match: EDO43602 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RYA5]) HSP 1 Score: 290.426 bits (742), Expect = 3.553e-88 Identity = 168/440 (38.18%), Postives = 251/440 (57.05%), Query Frame = 2 Query: 416 WTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF------------------------RHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLL 1645 WT + + ++E + ++ R+ I +G IP + ++ + ++P L ++ G K+PT IQ Q +P+ L RD+IG+A TGSGKT FA+PL+++ M LP ++ ++GP+ LI+ P+RELA Q + I + + V IGG S ++Q + R G V +V+ATPGRLID+LE + LN C Y+V+DEADRMIDMGFE E++ + + RQT++F+ATMP ++++ AK+ L +P VV +G G + Q V V + K ++LL+ L K +PP+IIF QK D + + L G A ++H G QE+R ++ K G KD+LVATDVAG+G+D + HVINYDM IE Y HRIGRTGR K G+A +F+ +S + + DLK LL Sbjct: 316 WTKKN-LEEMTERDWRIFREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLLVWI----MGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLG--------IRTVSVIGGLSREDQGFQLRLG-VEIVIATPGRLIDVLENRYLVLNRCSYIVMDEADRMIDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATMPPQVERLAKNYLRRPAVVYIGSVGKPVERVEQRVYLVNEQQKRKKLLELLNKDLEPPIIIFVNQKKGADVLAKSLEKMGFRATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDYTHRIGRTGRAGKTGIAVSFLTQS-DSGVFYDLKQLL 740
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Nematostella
Match: EDO38061 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDX5]) HSP 1 Score: 250.366 bits (638), Expect = 1.840e-76 Identity = 161/424 (37.97%), Postives = 221/424 (52.12%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVK----PXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKP-PVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIE 1690 + + + + R + + G N+P + F + P + K +G PT IQ QG PVALTGR+++GIA TGSGKTL F LP ++ Q + P +GP L++ P+RELA Q ++ + KL + CI G + K R GV + +ATPGRLID+LE + +L C YLVLDEADRM+DMGFE +IRT+ R RQTL++SAT P+++Q A L V A L I E + E KL +LL+ + K +IFTE K D + L G A IH Q ER + F++G +LVATDVA +GLD I+ VIN+D P+ E YVHRIGRT R + G + TF + N +L +LQEA Q LL ++ Sbjct: 29 VQARGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQGWPVALTGRNLVGIAQTGSGKTLSFILPGIVHINHQPLLQP---GDGPIVLVLCPTRELAQQVQEVAYSVGKHC--------KLRST-CIYGGAPKGPQIRELERGVEICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLTANHKILQIVDVCEDHEKEHKLLKLLEEIMGEKENKTLIFTETKRRADELTRKLRSDGWPAMCIHGDKAQPERDWVLSEFRKGHAPILVATDVASRGLDISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVN-NAKQAKELVSVLQEAKQHVNPKLLNLQ 439
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Nematostella
Match: EDO42894 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S034]) HSP 1 Score: 241.891 bits (616), Expect = 3.979e-70 Identity = 151/424 (35.61%), Postives = 224/424 (52.83%), Query Frame = 2 Query: 425 PSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCI---GGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCR---YLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQ--KTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPE 1672 P EE + + I G+N P + + + L+VLK + PT IQ Q +PV ++GRDMIGIA TGSGKTL F +P+ +Q P EGP +++ P+RELA Q H+ E K F K + C+ GGT EQ + G ++V TPGR+ID+L + + C+ YLVLDEADRM DMGFE ++ + R RQT++FSAT PR+++ A+ L KP+ + VG ++ Q+V ++ + K +LL+ L + + V++F E++ D + + LL + S+H GM Q +R +I FK G +++AT VA +GLD + V+NYD P+ E YVHR+GRTGR +G A TF+ +D+ L+ A PE Sbjct: 105 PELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIGIAKTGSGKTLAFLIPMFRHIKDQP---PLEREEGPIAIVMTPTRELAIQIHR-----------ECKKFCKPNNLRCVCVYGGTGISEQIAELKRGA-EIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVGGRSVVCSDVEQNVVVIEEDDKFLKLLELLGLYQEQGSVLVFVEKQDSADSLFKDLLKRSYPCLSLHGGMDQFDRDSTIADFKNGVTKLMIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRVGRTGRAGNKGTAYTFLTPE-QGRFAIDVIKALEMAENPVPE 512
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Medaka
Match: DDX41 (DEAD-box helicase 41 [Source:NCBI gene;Acc:101175087]) HSP 1 Score: 603.208 bits (1554), Expect = 0.000e+0 Identity = 317/546 (58.06%), Postives = 408/546 (74.73%), Query Frame = 2 Query: 221 GPKGKGTLI-EHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIET--QGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKE--SHASADY 1843 GP+ +L+ +H H + +E K S EKQ E++IL ++AE AL V E+AK I Y + IKTSW P +I ++ E + +R + I+ +G+ IP + F +M+ P L LK KGI +PT IQ+QG+P L+GRDMIGIA TGSGKTLVF LP+++F LEQE LPF EGP+GLII PSRELA QTH II + +E P+L LCIGG S KEQ + ++G VH++VATPGRL+DLL+KK SL++CRYL LDEADRMIDMGFEE+IRT+FSYF+ QRQTLLFSATMP+KIQ FAKSALVKPV +NVGRAGAA+L++ Q+VEYVK E K+ LL+CLQKT PPV+IF E+K++VD IHEYLL+KGV+A +IH G QEER ++I+ FK+G+KDVLVATDVA KGLDFP I+HV+NYDMP++IE YVHRIGRTGR K G+ATTFINK+C+ES+L+DLK LL EA Q P L ++T + + D G+ GC++CGGLGHRI CPK E++Q +Q +IGRK+ +H+S D+ Sbjct: 72 GPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGIIYDDPIKTSWKAPRYILNMPETRHERVRKKFHILVDGDGIPAPIKSFREMKFPPAILKGLKKKGIVHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFALEQEKRLPFFKREGPYGLIICPSRELARQTHSIIEYYCKLLEEEGA--PQLRTALCIGGMSVKEQMEVVKHG-VHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKACDESVLMDLKALLIEAKQKVPPVLQVLQTGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVTNIGRKDYLAHSSMDF 614
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Medaka
Match: ddx23 (DEAD-box helicase 23 [Source:NCBI gene;Acc:101157453]) HSP 1 Score: 273.092 bits (697), Expect = 3.060e-81 Identity = 165/442 (37.33%), Postives = 249/442 (56.33%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEA 1654 ++ +++ + ++ R+ I +G IP + + + LP L V+ G K PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q + R G +V+ATPGRLID+LE + L C Y+VLDEADRMIDMGFE +++ + Y +H+ RQT++F+ATMP +++ A+S L + VV +G AG + + Q V + K +++L+ L +PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + VINYDM +IE Y+HRIGRTGR K GVA TF+ K + ++ DLK + E+ Sbjct: 319 LDEMTDRDWRIFREDYSITTKGGKIPNPIRNWKEYALPAHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDSDQGPYAVILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFKLRMG-CEIVIATPGRLIDVLENRYLVLGRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDEAEDPEKMTMNFESGKHKYRQTVMFTATMPPAVERLARSYLRRAAVVYIGSAGKPHERVEQKVMLMSEGEKRKKMLEVLASGFEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVINYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKE-DSAVFYDLKQAILES 743
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Medaka
Match: ddx23 (DEAD-box helicase 23 [Source:NCBI gene;Acc:101157453]) HSP 1 Score: 272.322 bits (695), Expect = 7.265e-81 Identity = 165/442 (37.33%), Postives = 249/442 (56.33%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-----NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPK---LTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYF-------------------------RHQ-RQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEA 1654 ++ +++ + ++ R+ I +G IP + + + LP L V+ G K PT IQ Q +P+ L RD+IG+A TGSGKT F +PL+++ +LP +D ++GP+ +I+ P+RELA Q I +E F K + V IGG S ++Q + R G +V+ATPGRLID+LE + L C Y+VLDEADRMIDMGFE +++ + Y +H+ RQT++F+ATMP +++ A+S L + VV +G AG + + Q V + K +++L+ L +PP+IIF QK D + + L G +A ++H G QE+R ++ K G KD+LVATDVAG+G+D + VINYDM +IE Y+HRIGRTGR K GVA TF+ K + ++ DLK + E+ Sbjct: 344 LDEMTDRDWRIFREDYSITTKGGKIPNPIRNWKEYALPAHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI----TTLPKIDRIEDSDQGPYAVILAPTRELAQQ-----------IEEETIKFGKPLGIRTVAVIGGISREDQGFKLRMG-CEIVIATPGRLIDVLENRYLVLGRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDEAEDPEKMTMNFESGKHKYRQTVMFTATMPPAVERLARSYLRRAAVVYIGSAGKPHERVEQKVMLMSEGEKRKKMLEVLASGFEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVINYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKE-DSAVFYDLKQAILES 768
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Medaka
Match: ENSORLT00000031911.1 (probable ATP-dependent RNA helicase DDX17 [Source:NCBI gene;Acc:101171584]) HSP 1 Score: 264.618 bits (675), Expect = 1.705e-79 Identity = 165/427 (38.64%), Postives = 234/427 (54.80%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVD-NEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXX-XXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQ----KTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA-TPEFLLAIET 1693 + +S+ +++ R ++ I G P L F + P+ ++VL + K PTAIQ QG P+AL+GRDM+GIA TGSGKTL + LP ++ Q P++D +GP L++ P+RELA Q ++ D G + KS C+ G + K R GV + +ATPGRLID LE +L C YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L + V +AN NI Q V+ K Q+L+ ++ + + IIF E K D + + G A IH Q ER + F+ G+ VL+ATDVA +GLD ++ VINYD P+ E Y+HRIGRT R +G A TF N +L +L+EA QA P+ L +ET Sbjct: 64 VERMSQFDVEEFRRKKEITVRGSGCPKPLTSFHQAQFPQYVIDVLMQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ----PYLDRGDGPICLVLAPTRELAQQVQQVACDY--GKSSRIKS-------TCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINIGALELSANHNILQIVDVCTESEKDQKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPVLIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTNKGTAYTFFTPG-NVRQARELVRVLEEARQAINPKLLQLVET 476
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Medaka
Match: DDX5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:101167926]) HSP 1 Score: 258.84 bits (660), Expect = 2.960e-77 Identity = 155/419 (36.99%), Postives = 233/419 (55.61%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDN-EGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSAL-------VKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLL-DCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQA 1663 + S + ++ R + + +G + P +++F + P ++++ + +PT IQ QG PVAL+G+DM+GIA TGSGKTL + LP ++ Q PF+++ +GP L++ P+RELA Q ++ + G KS CI G + K R GV + +ATPGRLID LE +L C YLVLDEADRM+DMGFE +IR + R RQTL++SAT P++++Q A+ L + + ++ +++ D+E E KL RLL + + + + IIF E K D + + G A IH Q+ER ++ F+ G+ +L+ATDVA +GLD ++ VINYD P+ E Y+HRIGRT R +K G A TF + N DL +L+EANQA Sbjct: 71 VTHRSPQEIEQYRRSKEVTVKGRDCPKPMIKFNEASFPSYVMDMIVKQNFTDPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQ----PFLEHGDGPICLVLAPTRELAQQVQQVAAEY--GRASRLKS-------TCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECNKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQINIGALQLSANHNILQIVDVCNDME---KEDKLIRLLEEIMSEKENKTIIFVETKRRCDELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPN-NMKQAGDLISVLREANQA 472
BLAST of ATP-dependent RNA helicase abstrakt vs. Planmine SMEST
Match: SMESG000012362.1 (SMESG000012362.1) HSP 1 Score: 1106.66 bits (2861), Expect = 0.000e+0 Identity = 549/551 (99.64%), Postives = 550/551 (99.82%), Query Frame = 2 Query: 191 NQLINDSVVKGPKGKGTLIEHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 1843 NQLINDSVVKGPKGKGTLIEHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFIN+LSEENMKLIRDQQRIIAEGENIPPCLL FGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPVVVNVGRAGAANLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY Sbjct: 147 NQLINDSVVKGPKGKGTLIEHIHQSKNSEEDKLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINNLSEENMKLIRDQQRIIAEGENIPPCLLGFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPVVVNVGRAGAANLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGLEDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 697 HSP 2 Score: 105.145 bits (261), Expect = 2.566e-23 Identity = 60/69 (86.96%), Postives = 63/69 (91.30%), Query Frame = 3 Query: 18 KRXXXXXXPSDDEDFAPYIPVKERKLIKLKEINQKVLKIYGESLGSQNESRAKTVQSSIN*LMTVLLKG 224 KRSNSNSNPSDDEDFAPYIPVKERKLIKLKEINQKVLKIYGESLGSQNESRAKTVQSS + ++KG Sbjct: 89 KRSNSNSNPSDDEDFAPYIPVKERKLIKLKEINQKVLKIYGESLGSQNESRAKTVQSSNQLINDSVVKG 157
BLAST of ATP-dependent RNA helicase abstrakt vs. Planmine SMEST
Match: SMESG000078563.1 (SMESG000078563.1) HSP 1 Score: 850.121 bits (2195), Expect = 0.000e+0 Identity = 416/549 (75.77%), Postives = 486/549 (88.52%), Query Frame = 2 Query: 203 NDSVVKGPKGKGTLIEHIHQSKNSEED-KLSELEKQKNIEDEILRNIAEKTALKGVAEIAKDIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAIETQGL-EDSQGDIGCSYCGGLGHRIIVCPKRESLQNRQAHDIGRKESHASADY 1843 + ++++GPK KGTLI+HI+ SKN E+ +L E E Q IE+EILRNIAEKTALKGVAEIA DI Y++SIKTSW+PPSF+ +S ENM +R + II +GENIPPCL+RF +MRLPKP L +LK K I PT+IQMQGLPV L+GRDMIGIASTGSGKTLVF+LPL+LF +EQEM+LPF+DNEGPFGLIIGPSRELASQTHKIIT+LS+ I+KE KSFPK+ +VLCIGGTS K+Q ++ + G+HVVVATPGRLIDLL+KK+F+LN+CRYLVLDEADRMIDMGFEEEIR VFSYF+HQ+QTLLFSATMP+KIQ+FAKSALVKPV+VNVGRAGAA++NIRQDVEYVKHE +LQRLL CLQKTKPPVIIFTEQKSEVD+IHEYLLIKGV SIHSGM QEERLRS++ FK G+KDVLVATDVAGKGLDFPKIR VINYDMP+DIEIYVHRIGRTGRHKK GVATTFINK+C+ESILLDLK+LL+EANQ PEFLLAIE+ + E + D+GCSYCGGLGHRI++CPKRE+LQN+QAH+I R S+ + DY Sbjct: 63 SSNIIRGPKAKGTLIDHINFSKNQEDTIQLEESELQNKIEEEILRNIAEKTALKGVAEIANDISYVDSIKTSWSPPSFVKKISSENMNNLRVKYNIIVDGENIPPCLIRFEEMRLPKPVLRILKDKEIITPTSIQMQGLPVVLSGRDMIGIASTGSGKTLVFSLPLILFNVEQEMNLPFMDNEGPFGLIIGPSRELASQTHKIITELSNEIHKEKKSFPKINSVLCIGGTSIKDQIEKCKRNGIHVVVATPGRLIDLLDKKAFNLNICRYLVLDEADRMIDMGFEEEIRKVFSYFKHQKQTLLFSATMPKKIQEFAKSALVKPVIVNVGRAGAASMNIRQDVEYVKHEDRLQRLLWCLQKTKPPVIIFTEQKSEVDFIHEYLLIKGVSTTSIHSGMVQEERLRSVESFKTGEKDVLVATDVAGKGLDFPKIRQVINYDMPEDIEIYVHRIGRTGRHKKTGVATTFINKNCSESILLDLKMLLKEANQIIPEFLLAIESLAVSEGNPSDVGCSYCGGLGHRILMCPKRENLQNKQAHEICRPTSNVAGDY 611
BLAST of ATP-dependent RNA helicase abstrakt vs. Planmine SMEST
Match: SMESG000033916.1 (SMESG000033916.1) HSP 1 Score: 273.478 bits (698), Expect = 1.154e-83 Identity = 160/420 (38.10%), Postives = 248/420 (59.05%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXX-XXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAI 1687 +++ S ++ R + + +G+NI + F ++ L + ++V++ PT IQ QGLP+AL+GR+++G+A TGSGKT + +P ++ Q P +GP LI+ P+RELA Q + D + + + +V GG + +Q + RNG ++VATPGRLIDLL+ +L+ Y+VLDEADRM+DMGFE +IR +FS R RQTL++SAT P+++Q+ A+ L K + VN+ + AN NI Q VE + K +RLL+ + KT + +I+F E K + D I +L K ++H Q +R ++GF+ ++LVATDVA +GLD I+ VINYD P E Y+HRIGRTGR K GV+ TF N+ ++S +K +++EANQ+ + L + Sbjct: 104 VSNRSSSEIENYRRLKEMTVKGDNINKPIFSFNEIDLSREIMSVIRNNKWNEPTPIQAQGLPMALSGRNLVGVARTGSGKTASYLIPAIVHLKAQP---PLRRGDGPICLIVVPTRELAQQVQTVANDFCESVG--------IRSVCVYGGANKGDQIRQLRNGA-EIIVATPGRLIDLLKSSITNLHRTTYVVLDEADRMLDMGFEPQIRKIFSQVRQDRQTLMWSATWPKEVQRLAQDFLGKYIQVNIGSQELHANPNIEQIVEILDEYSKDKRLLEVVSKTPRDKMIVFAETKKKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVK-VMEEANQSVSDSLYDL 510
BLAST of ATP-dependent RNA helicase abstrakt vs. Planmine SMEST
Match: SMESG000033908.1 (SMESG000033908.1) HSP 1 Score: 271.937 bits (694), Expect = 5.472e-83 Identity = 159/420 (37.86%), Postives = 247/420 (58.81%), Query Frame = 2 Query: 434 INSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXX-XXXXXXXLNIRQDVEYVKHEGKLQRLLDCLQKT-KPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNESILLDLKLLLQEANQATPEFLLAI 1687 +++ S ++ R + + +G+NI + F ++ L + ++V++ PT IQ QGLP+AL+GR+++G+A TGSGKT + +P ++ Q P +GP LI+ P+RELA Q + D + + + +V GG + +Q + R G ++VATPGRLIDLL+ +L+ Y+VLDEADRM+DMGFE +IR +FS R RQTL++SAT P+++Q+ A+ L K + VN+ + AN NI Q VE + K +RLL+ + KT + +I+F E K + D I +L K ++H Q +R ++GF+ ++LVATDVA +GLD I+ VINYD P E Y+HRIGRTGR K GV+ TF N+ ++S +K +++EANQ+ + L + Sbjct: 110 VSNRSSSEIENYRRLKEMTVKGDNINKPIFSFNEIDLSREIMSVIRNNKWNEPTPIQAQGLPMALSGRNLVGVARTGSGKTASYLIPAIVHLKAQP---PLRRGDGPICLIVVPTRELAQQVQTVANDFCESVG--------IRSVCVYGGANKGDQIRQLR-SGAEIIVATPGRLIDLLKSSITNLHRTTYVVLDEADRMLDMGFEPQIRKIFSQVRQDRQTLMWSATWPKEVQRLAQDFLGKYIQVNIGSQELHANPNIEQIVEILDEYSKDKRLLEVVSKTPRDKMIVFAETKKKADMICSFLRSKQFRVGAMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVK-VMEEANQSVSDSLYDL 516
BLAST of ATP-dependent RNA helicase abstrakt vs. Planmine SMEST
Match: SMESG000012031.1 (SMESG000012031.1) HSP 1 Score: 283.878 bits (725), Expect = 1.097e-82 Identity = 171/440 (38.86%), Postives = 247/440 (56.14%), Query Frame = 2 Query: 383 DIHYIESIKTSWTPPSFINSLSEENMKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMQGLPVALTGRDMIGIASTGSGKTLVFALPLVLFCLEQEMSLPFVDNEGPFGLIIGPSRELASQTHKIITDLSDGINKENKSFPKLTAVLCIGGTSAKEQTDRFRNGGVHVVVATPGRLIDLLEKKSFSLNMCRYLVLDEADRMIDMGFEEEIRTVFSYFRHQRQTLLFSATMPRKIQQFAKSALVKPXXXXXXXXXXXXLN--IRQDVEYVKHEGKLQRLLD--CLQKTKPPVIIFTEQKSEVDYIHEYLLIKGVDAASIHSGMPQEERLRSIDGFKQGQKDVLVATDVAGKGLDFPKIRHVINYDMPDDIEIYVHRIGRTGRHKKRGVATTFINKSCNE-SILLDLKLLLQEANQATPEFLLAI 1687 DI ++ K + S + + + ++ R + I GEN+P +L F +++ P +N +K PTAIQ QG P+AL+G D++GIA TGSGKT F LP ++ E P +GP LI+ P+RELA Q K+ + S+ + K+ C GG S Q + N VV+ATPGRLID L K +L C YLVLDEADRM+DMGFE +IR + S R RQTL++SAT P ++Q A S +K V + + N I+Q VE + + K +RL++ C K K ++F+E K +VD + ++ KG+D ++H Q ER + + F+ G+ VL+ATDVA +GLD I +VINYD P +E Y+HRIGRT R K+G+A TF N ++ DL ++L+EA Q P L + Sbjct: 31 DIQLMKFEKNFYKEISVVRNRNVSEVEKFRKENNITIIGENVPNPVLCFEEVQFPNFIMNAIKDNRWIKPTAIQSQGWPMALSGSDVVGIAQTGSGKTASFLLPAIVHI---EAQPPVQSGDGPICLILVPTRELAQQVEKVAIEFSE--------YAKIKIACCYGGASRNSQIHQL-NKNPEVVIATPGRLIDFLNDKITNLRRCTYLVLDEADRMLDMGFEPDIRKIVSQVRPDRQTLMWSATWPNEVQNLA-SDFLKNYVQINVGSLYLHANPDIKQKVEILDEKEKEERLIEILCDNKRKRS-LVFSETKRKVDDLCRIIVRKGIDCMAMHGDKVQREREKVLQDFRDGRCYVLIATDVASRGLDIDDIEYVINYDYPSKLEDYIHRIGRTARSGKKGIAYTFFNPMKDKPRQAQDLIMILEEAKQEVPTELRDV 456 The following BLAST results are available for this feature:
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase abstrakt vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30032549 ID=SMED30032549|Name=ATP-dependent RNA helicase abstrakt|organism=Schmidtea mediterranea sexual|type=transcript|length=1882bpback to top protein sequence of SMED30032549-orf-1 >SMED30032549-orf-1 ID=SMED30032549-orf-1|Name=SMED30032549-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=463bp MKLIRDQQRIIAEGENIPPCLLRFGDMRLPKPALNVLKVKGIKNPTAIQMback to top Annotated Terms
The following terms have been associated with this transcript:
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