SMED30032529
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppSub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30032529 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Alignments
SMED30032529 aligns in the following genomic locations:
Homology
BLAST of SMED30032529 vs. Ensembl Human
Match: ANKRD44 (ankyrin repeat domain 44 [Source:HGNC Symbol;Acc:HGNC:25259]) HSP 1 Score: 56.6102 bits (135), Expect = 6.545e-8 Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 225 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEID 333
BLAST of SMED30032529 vs. Ensembl Human
Match: ANKRD44 (ankyrin repeat domain 44 [Source:HGNC Symbol;Acc:HGNC:25259]) HSP 1 Score: 56.6102 bits (135), Expect = 6.851e-8 Identity = 40/115 (34.78%), Postives = 54/115 (46.96%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDF 661 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 225 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEIDC 334
BLAST of SMED30032529 vs. Ensembl Human
Match: ANKRD44 (ankyrin repeat domain 44 [Source:HGNC Symbol;Acc:HGNC:25259]) HSP 1 Score: 55.8398 bits (133), Expect = 6.933e-8 Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 225 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEID 333
BLAST of SMED30032529 vs. Ensembl Human
Match: ANKRD44 (ankyrin repeat domain 44 [Source:HGNC Symbol;Acc:HGNC:25259]) HSP 1 Score: 56.225 bits (134), Expect = 7.212e-8 Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 225 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEID 333
BLAST of SMED30032529 vs. Ensembl Human
Match: ANKRD44 (ankyrin repeat domain 44 [Source:HGNC Symbol;Acc:HGNC:25259]) HSP 1 Score: 56.225 bits (134), Expect = 7.623e-8 Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 22 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEID 130
BLAST of SMED30032529 vs. Ensembl Fly
Match: Kank (gene:FBgn0027596 transcript:FBtr0303758) HSP 1 Score: 51.9878 bits (123), Expect = 6.256e-7 Identity = 38/125 (30.40%), Postives = 65/125 (52.00%), Query Frame = 2 Query: 299 KSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNI-LNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFKYE 670 +SLS LLEY ++ D G A+H++V D+V I L+S D+N NN G+T++ ++ K +++ ++ K +NI K + LM ++ H N V +L+D GA + + E Sbjct: 236 ESLSIPLLEYC--VNLSDSNGNTAMHYAVSHGNFDVVSILLDSKVCDVNQMNNAGYTSVMLVSLAKLKQPAHRTVVERLFKMA-DVNIRAKKHCQTALMLAVSHGNGDMVNMLLDAGADINIQDE 357
BLAST of SMED30032529 vs. Ensembl Fly
Match: Kank (gene:FBgn0027596 transcript:FBtr0303756) HSP 1 Score: 52.373 bits (124), Expect = 6.763e-7 Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 302 SLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNI-LNKFNNSPLMESIRHLNFHAVEVLIDNGA 649 SLS LLEY ++ D G A+H++V D+V I L+S D+N NN G+T++ ++ K +++ ++ K +NI K + LM ++ H N V +L+D GA Sbjct: 854 SLSIPLLEYC--VNLSDSNGNTAMHYAVSHGNFDVVSILLDSKVCDVNQMNNAGYTSVMLVSLAKLKQPAHRTVVERLFKM-ADVNIRAKKHCQTALMLAVSHGNGDMVNMLLDAGA 967
BLAST of SMED30032529 vs. Ensembl Fly
Match: Kank (gene:FBgn0027596 transcript:FBtr0087431) HSP 1 Score: 51.9878 bits (123), Expect = 7.805e-7 Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 302 SLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNI-LNKFNNSPLMESIRHLNFHAVEVLIDNGA 649 SLS LLEY ++ D G A+H++V D+V I L+S D+N NN G+T++ ++ K +++ ++ K +NI K + LM ++ H N V +L+D GA Sbjct: 833 SLSIPLLEYC--VNLSDSNGNTAMHYAVSHGNFDVVSILLDSKVCDVNQMNNAGYTSVMLVSLAKLKQPAHRTVVERLFKM-ADVNIRAKKHCQTALMLAVSHGNGDMVNMLLDAGA 946
BLAST of SMED30032529 vs. Ensembl Fly
Match: Kank (gene:FBgn0027596 transcript:FBtr0332856) HSP 1 Score: 51.9878 bits (123), Expect = 8.146e-7 Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 302 SLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNI-LNKFNNSPLMESIRHLNFHAVEVLIDNGA 649 SLS LLEY ++ D G A+H++V D+V I L+S D+N NN G+T++ ++ K +++ ++ K +NI K + LM ++ H N V +L+D GA Sbjct: 830 SLSIPLLEYC--VNLSDSNGNTAMHYAVSHGNFDVVSILLDSKVCDVNQMNNAGYTSVMLVSLAKLKQPAHRTVVERLFKM-ADVNIRAKKHCQTALMLAVSHGNGDMVNMLLDAGA 943
BLAST of SMED30032529 vs. Ensembl Fly
Match: Kank (gene:FBgn0027596 transcript:FBtr0087430) HSP 1 Score: 51.9878 bits (123), Expect = 9.751e-7 Identity = 37/117 (31.62%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 302 SLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNI-LNKFNNSPLMESIRHLNFHAVEVLIDNGA 649 SLS LLEY ++ D G A+H++V D+V I L+S D+N NN G+T++ ++ K +++ ++ K +NI K + LM ++ H N V +L+D GA Sbjct: 1015 SLSIPLLEYC--VNLSDSNGNTAMHYAVSHGNFDVVSILLDSKVCDVNQMNNAGYTSVMLVSLAKLKQPAHRTVVERLFKM-ADVNIRAKKHCQTALMLAVSHGNGDMVNMLLDAGA 1128
BLAST of SMED30032529 vs. Ensembl Zebrafish
Match: CABZ01071939.1 (pep chromosome:GRCz11:19:2018796:2029777:-1 gene:ENSDARG00000086326.3 transcript:ENSDART00000128639.3 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CABZ01071939.1) HSP 1 Score: 51.9878 bits (123), Expect = 9.475e-7 Identity = 37/118 (31.36%), Postives = 57/118 (48.31%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFKYE 670 LL G I++ + YG ALH + N +D+V L + D+N N GF+ALH+ S LE LI + +LN +K +PL + H + + +I NGA + + E Sbjct: 71 LLSLGVDINEPNAYGNTALHLACF-NGQDVVVNELIAAGADVNQVNEKGFSALHFTAASRQGALCLELLIAN----RANLNCKSKDGKTPLHMAAIHGRYSRSQAIIQNGAEINCEDE 183
BLAST of SMED30032529 vs. Ensembl Zebrafish
Match: ankrd44 (ankyrin repeat domain 44 [Source:ZFIN;Acc:ZDB-GENE-070912-605]) HSP 1 Score: 51.9878 bits (123), Expect = 1.017e-6 Identity = 35/115 (30.43%), Postives = 53/115 (46.09%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDF 661 LL +ID+ + +G ALH + N +D V L + +++ NN GFT LH+A S LE L+ +N+ ++ SPL + H F + LI NG D Sbjct: 216 LLSLAVEIDEANAFGNTALHVACF-NGQDAVVSELIDYGANVSQPNNKGFTPLHFAAASTHGALCLEFLV----NSGADVNVQSRDGKSPLHLTAVHGRFTRSQTLIQNGGEIDC 325
BLAST of SMED30032529 vs. Ensembl Zebrafish
Match: ankrd44 (ankyrin repeat domain 44 [Source:ZFIN;Acc:ZDB-GENE-070912-605]) HSP 1 Score: 51.9878 bits (123), Expect = 1.060e-6 Identity = 35/115 (30.43%), Postives = 53/115 (46.09%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDF 661 LL +ID+ + +G ALH + N +D V L + +++ NN GFT LH+A S LE L+ +N+ ++ SPL + H F + LI NG D Sbjct: 225 LLSLAVEIDEANAFGNTALHVACF-NGQDAVVSELIDYGANVSQPNNKGFTPLHFAAASTHGALCLEFLV----NSGADVNVQSRDGKSPLHLTAVHGRFTRSQTLIQNGGEIDC 334
BLAST of SMED30032529 vs. Ensembl Zebrafish
Match: rai14 (retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]) HSP 1 Score: 51.6026 bits (122), Expect = 1.493e-6 Identity = 42/159 (26.42%), Postives = 73/159 (45.91%), Query Frame = 2 Query: 173 AIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGA 649 A+ G +V LL+K+ K+ S+ L T +L +GA + +D GF ALH + N + + L + ++ ++ G TALH+A + EI++ L + KY +N+ + +PL+ S RH + + L+D GA Sbjct: 26 AVEHGEADKVTSLLSKKGASPTKLDSEGKSAL--HAAATRGQTECLAVILAHGADVSLQDASGFTALHLAAKNNHPECAKKLLQNKCV-VDAPDSSGRTALHHAAACGNN-EIVQLLC----ENKYHVNLKDSDGFTPLLLSARHAHAEVCQSLLDWGA 176
BLAST of SMED30032529 vs. Ensembl Zebrafish
Match: rai14 (retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]) HSP 1 Score: 51.6026 bits (122), Expect = 1.527e-6 Identity = 42/159 (26.42%), Postives = 73/159 (45.91%), Query Frame = 2 Query: 173 AIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGA 649 A+ G +V LL+K+ K+ S+ L T +L +GA + +D GF ALH + N + + L + ++ ++ G TALH+A + EI++ L + KY +N+ + +PL+ S RH + + L+D GA Sbjct: 26 AVEHGEADKVTSLLSKKGASPTKLDSEGKSAL--HAAATRGQTECLAVILAHGADVSLQDASGFTALHLAAKNNHPECAKKLLQNKCV-VDAPDSSGRTALHHAAACGNN-EIVQLLC----ENKYHVNLKDSDGFTPLLLSARHAHAEVCQSLLDWGA 176
BLAST of SMED30032529 vs. Ensembl Xenopus
Match: psmd10 (proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:549110]) HSP 1 Score: 55.4546 bits (132), Expect = 3.345e-8 Identity = 36/133 (27.07%), Postives = 59/133 (44.36%), Query Frame = 2 Query: 281 TDTFWAKSLSFT-----LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFK 664 T WA S T LL G +D KD+ G+ LH + + D+V + +N N G T LHYA S++K EI + + S + + ++PL + N V++L+ + A T+ + Sbjct: 43 TALHWACSAGRTEVAEYLLRLGVPVDAKDDAGWTPLHIAASAGRDDIVRALIGKG-AQVNAANQIGCTPLHYAA-SKNKHEI----ALMLLENGASPDAKDNLESTPLHRAASKGNLRIVQILLKHQASTNIQ 169
BLAST of SMED30032529 vs. Ensembl Xenopus
Match: ankrd52 (ankyrin repeat domain 52 [Source:NCBI gene;Acc:100127696]) HSP 1 Score: 51.2174 bits (121), Expect = 2.629e-6 Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL+ G +ID+ + +G ALH + + D V L ++ ++N N GFT LH+A S + LE L+ +N +K SPL + H F ++LI NG D Sbjct: 229 LLKLGVEIDEPNAFGNTALHIACYMGQ-DAVANELVNYGSNVNQPNEKGFTPLHFAAVSTNGALCLELLV----NNGADVNFQSKEGKSPLHMAAIHGRFTRSQILIQNGGEID 337
BLAST of SMED30032529 vs. Ensembl Xenopus
Match: ankrd52 (ankyrin repeat domain 52 [Source:NCBI gene;Acc:100127696]) HSP 1 Score: 51.2174 bits (121), Expect = 2.647e-6 Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL+ G +ID+ + +G ALH + + D V L ++ ++N N GFT LH+A S + LE L+ +N +K SPL + H F ++LI NG D Sbjct: 225 LLKLGVEIDEPNAFGNTALHIACYMGQ-DAVANELVNYGSNVNQPNEKGFTPLHFAAVSTNGALCLELLV----NNGADVNFQSKEGKSPLHMAAIHGRFTRSQILIQNGGEID 333
BLAST of SMED30032529 vs. Ensembl Xenopus
Match: ankrd52 (ankyrin repeat domain 52 [Source:NCBI gene;Acc:100127696]) HSP 1 Score: 51.2174 bits (121), Expect = 3.017e-6 Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL+ G +ID+ + +G ALH + + D V L ++ ++N N GFT LH+A S + LE L+ +N +K SPL + H F ++LI NG D Sbjct: 225 LLKLGVEIDEPNAFGNTALHIACYMGQ-DAVANELVNYGSNVNQPNEKGFTPLHFAAVSTNGALCLELLV----NNGADVNFQSKEGKSPLHMAAIHGRFTRSQILIQNGGEID 333
BLAST of SMED30032529 vs. Ensembl Xenopus
Match: ankrd52 (ankyrin repeat domain 52 [Source:NCBI gene;Acc:100127696]) HSP 1 Score: 51.2174 bits (121), Expect = 3.078e-6 Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL+ G +ID+ + +G ALH + + D V L ++ ++N N GFT LH+A S + LE L+ +N +K SPL + H F ++LI NG D Sbjct: 225 LLKLGVEIDEPNAFGNTALHIACYMGQ-DAVANELVNYGSNVNQPNEKGFTPLHFAAVSTNGALCLELLV----NNGADVNFQSKEGKSPLHMAAIHGRFTRSQILIQNGGEID 333
BLAST of SMED30032529 vs. Ensembl Mouse
Match: Ankrd44 (ankyrin repeat domain 44 [Source:MGI Symbol;Acc:MGI:3045243]) HSP 1 Score: 56.9954 bits (136), Expect = 3.178e-8 Identity = 40/115 (34.78%), Postives = 54/115 (46.96%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDF 661 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 225 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEIDC 334
BLAST of SMED30032529 vs. Ensembl Mouse
Match: Ankrd44 (ankyrin repeat domain 44 [Source:MGI Symbol;Acc:MGI:3045243]) HSP 1 Score: 56.9954 bits (136), Expect = 3.364e-8 Identity = 40/115 (34.78%), Postives = 54/115 (46.96%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDF 661 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 225 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEIDC 334
BLAST of SMED30032529 vs. Ensembl Mouse
Match: Ankrd44 (ankyrin repeat domain 44 [Source:MGI Symbol;Acc:MGI:3045243]) HSP 1 Score: 56.6102 bits (135), Expect = 4.315e-8 Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 22 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEID 130
BLAST of SMED30032529 vs. Ensembl Mouse
Match: Ankrd52 (ankyrin repeat domain 52 [Source:MGI Symbol;Acc:MGI:2444029]) HSP 1 Score: 54.6842 bits (130), Expect = 1.636e-7 Identity = 38/114 (33.33%), Postives = 55/114 (48.25%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL GA+ID+ + +G ALH + + D V I L + ++N N+ GFT LH A S + LE L+ Y +K SPL + H F ++LI NG+ D Sbjct: 225 LLRMGAEIDEPNAFGNTALHIACYLGQ-DAVAIELVNAGANVNQPNDKGFTPLHVAAVSTNGALCLELLVNNGADVNYQ----SKEGKSPLHMAAIHGRFTRSQILIQNGSEID 333
BLAST of SMED30032529 vs. Ensembl Mouse
Match: A26c3 (ANKRD26-like family C, member 3 [Source:MGI Symbol;Acc:MGI:1914825]) HSP 1 Score: 50.0618 bits (118), Expect = 3.385e-6 Identity = 46/165 (27.88%), Postives = 82/165 (49.70%), Query Frame = 2 Query: 293 WAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNG---------ARTDFKY--EGLS------FLDYFNNLKRKLKET-PEY 733 W LL++GA ++KD+ G +LH++V ++ + L + L + ++ KN GFT L A+ E+KIE+ + L+ K ++++ + + L+ +IR + V +L+D G T +Y EG S ++Y L+RK K+ PEY Sbjct: 123 WTYECVCILLKHGADPNRKDKNGNTSLHYAVSEDNQTLAKCLL-KYSANMEQKNKDGFTPLLLAL-KENKIEMAKFLV----KMGANIHVFDDMRRNTLLYAIRWDSKDMVNLLLDEGIDFFFRDVFGWTALRYAIEGTSKGSREILMNYDEMLRRKNKDGIPEY 281
BLAST of SMED30032529 vs. UniProt/SwissProt
Match: sp|B2RXR6|ANR44_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus OX=10090 GN=Ankrd44 PE=1 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.223e-7 Identity = 40/115 (34.78%), Postives = 54/115 (46.96%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDF 661 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 225 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEIDC 334
BLAST of SMED30032529 vs. UniProt/SwissProt
Match: sp|Q8N8A2|ANR44_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Homo sapiens OX=9606 GN=ANKRD44 PE=1 SV=3) HSP 1 Score: 56.6102 bits (135), Expect = 3.290e-7 Identity = 40/115 (34.78%), Postives = 54/115 (46.96%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDF 661 LL G +ID+ + YG ALH + N +D V L + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 225 LLNLGVEIDEINVYGNTALHIACY-NGQDAVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEIDC 334
BLAST of SMED30032529 vs. UniProt/SwissProt
Match: sp|Q5F478|ANR44_CHICK (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus OX=9031 GN=ANKRD44 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 4.499e-7 Identity = 37/114 (32.46%), Postives = 54/114 (47.37%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL G +ID+ + YG ALH + + +V ++ + ++N NN GFT LH+A S LE L+ +NI +K SPL + H F + LI NG D Sbjct: 225 LLNLGVEIDEMNIYGNTALHIACYNGQDSVVNELID-YGANVNQPNNNGFTPLHFAAASTHGALCLELLV----NNGADVNIQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEID 333
BLAST of SMED30032529 vs. UniProt/SwissProt
Match: sp|Q4UMH6|Y381_RICFE (Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=RF_0381 PE=4 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 6.080e-7 Identity = 43/162 (26.54%), Postives = 73/162 (45.06%), Query Frame = 2 Query: 173 AIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 A+ G V+ L+ +A+ K + ++ +F L + L+ YGA ++ K + G ALH++V DLV + + S D+N K N G T L+ AV+ S L++ + Y +N + L ++ N V +LI NGA + Sbjct: 678 AVKSGNLHLVKWLIENQANIHAKTDNGETVL---HYAVSFNNSDLVYLLIAYGADVNAKTDNGLTALHYAVYDGNLDLVSLLI-SHGADVNAKTNSGETILYSAVDYGS-----PDLVYLLIAYGADVNAKTDNGETVLHYAVESGNLDLVSLLIHNGANVN 830
BLAST of SMED30032529 vs. UniProt/SwissProt
Match: sp|Q8BTI7|ANR52_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Mus musculus OX=10090 GN=Ankrd52 PE=1 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 1.145e-6 Identity = 38/114 (33.33%), Postives = 55/114 (48.25%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL GA+ID+ + +G ALH + + D V I L + ++N N+ GFT LH A S + LE L+ Y +K SPL + H F ++LI NG+ D Sbjct: 225 LLRMGAEIDEPNAFGNTALHIACYLGQ-DAVAIELVNAGANVNQPNDKGFTPLHVAAVSTNGALCLELLVNNGADVNYQ----SKEGKSPLHMAAIHGRFTRSQILIQNGSEID 333
BLAST of SMED30032529 vs. TrEMBL
Match: A0A267DSQ1 (ANK_REP_REGION domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig020439g2 PE=4 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 4.750e-22 Identity = 53/151 (35.10%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 155 ASSPAEAIYRGLFKQVRELLN----KEADPDEKIKS-KTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLM 592 ++SPAEAI G F QVR LL AD E + +T ++LC+ + D W+ SL+ LLE GAK+ KD G NALH++ +++L E+FL + D+ ++ + + +A+HYAV ++ I+E+L +++ + ++ N+ +PLM Sbjct: 56 SASPAEAILAGYFAQVRYLLQTGGRGAADTREPLAGGRTPLILCSLVRDRCWSVSLARLLLEKGAKVGLKDRRGMNALHYACAHGREELAELFLQAIDYRVDAADGYRNSAMHYAVRG-GRLRIVEALAKVLQRLQLPVSPPNREGVTPLM 205
BLAST of SMED30032529 vs. TrEMBL
Match: A0A267E3L7 (ANK_REP_REGION domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig020439g1 PE=4 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 5.222e-22 Identity = 53/151 (35.10%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 155 ASSPAEAIYRGLFKQVRELLN----KEADPDEKIKS-KTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLM 592 ++SPAEAI G F QVR LL AD E + +T ++LC+ + D W+ SL+ LLE GAK+ KD G NALH++ +++L E+FL + D+ ++ + + +A+HYAV ++ I+E+L +++ + ++ N+ +PLM Sbjct: 63 SASPAEAILAGYFAQVRYLLQTGGRGAADTREPLAGGRTPLILCSLVRDRCWSVSLARLLLEKGAKVGLKDRRGMNALHYACAHGREELAELFLQAIDYRVDAADGYRNSAMHYAVRG-GRLRIVEALAKVLQRLQLPVSPPNREGVTPLM 212
BLAST of SMED30032529 vs. TrEMBL
Match: A0A1I8H035 (ANK_REP_REGION domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 5.726e-22 Identity = 53/151 (35.10%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 155 ASSPAEAIYRGLFKQVRELLN----KEADPDEKIKS-KTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLM 592 ++SPAEAI G F QVR LL AD E + +T ++LC+ + D W+ SL+ LLE GAK+ KD G NALH++ +++L E+FL + D+ ++ + + +A+HYAV ++ I+E+L +++ + ++ N+ +PLM Sbjct: 33 SASPAEAILAGYFAQVRYLLQTGGRGAADTREPLAGGRTPLILCSLVRDRCWSVSLARLLLEKGAKVGLKDRRGMNALHYACAHGREELAELFLQAIDYRVDAADGYRNSAMHYAVRG-GRLRIVEALAKVLQRLQLPVSPPNREGVTPLM 182
BLAST of SMED30032529 vs. TrEMBL
Match: A0A267GAP7 (ANK_REP_REGION domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig013982g1 PE=4 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 8.183e-22 Identity = 52/151 (34.44%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 155 ASSPAEAIYRGLFKQVRELLN----KEADPDEKIKS-KTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLM 592 ++SPAEAI G F QVR LL AD E + +T ++LC+ + D W+ SL+ LLE GAK+ KD G NALH++ +++L E+FL + D+ ++ + + +A+HYAV ++ ++E+L +++ + ++ N+ +PLM Sbjct: 14 SASPAEAILAGYFAQVRYLLQTGGRGAADTREPLAGGRTPLILCSLVRDRCWSVSLARLLLEKGAKVGLKDRRGMNALHYACAHGREELAELFLQAIDYRVDAADGYRNSAMHYAVRG-GRLRVVEALAKVLQRLQLPVSPPNREGVTPLM 163
BLAST of SMED30032529 vs. TrEMBL
Match: A0A1S3KG74 (uncharacterized protein LOC106181577 OS=Lingula unguis OX=7574 GN=LOC106181577 PE=4 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.434e-21 Identity = 55/159 (34.59%), Postives = 93/159 (58.49%), Query Frame = 2 Query: 173 AIYRGLFKQVRELLNKEADPDEKIKSK-TAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNG 646 AI RG F+QVR L+ +D + K + T ++LC + + W LS LLE GA + +D+ G NALH++ + + +LV +FL + D+D+N + FG TALHYAV S ++I L+ ++KY +++ N+ +PL+++ ++L+D G Sbjct: 15 AIKRGFFQQVRFLIELGSDVNGKDEDGLTPLILCAMIEEEEWGVGLSRLLLEKGASVGFRDKRGLNALHYACLYQRLELVRVFLCAIDYDLNQGDKFGNTALHYAV-SVGNVDITRLLLRTLQKYGMTVDKPNRRGFTPLIQAWSTGRVTCAQILVDEG 172
BLAST of SMED30032529 vs. Ensembl Cavefish
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:103034310]) HSP 1 Score: 53.5286 bits (127), Expect = 3.534e-7 Identity = 40/140 (28.57%), Postives = 69/140 (49.29%), Query Frame = 2 Query: 185 GLFKQVRELLNKEADP-DEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESI 601 G +VREL+ K D D K + KTA+ + K LL+ + I+ KDE G ALH++ N+ ++ + L S ++N NN TALH AVN ++ + ++ +N+ + + ++PL ++I Sbjct: 499 GSATKVRELVQKHPDKVDIKNQGKTALQVAAHQGHMEVVK----VLLQANSSIEAKDEDGDAALHYTAFGNQAEIARLLL-SKGANVNLLNNSMCTALHIAVNKG-----FTDVVRVLTEHSADVNLQDSYGDTPLHDAI 628
BLAST of SMED30032529 vs. Ensembl Cavefish
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:103034310]) HSP 1 Score: 53.1434 bits (126), Expect = 3.729e-7 Identity = 40/140 (28.57%), Postives = 69/140 (49.29%), Query Frame = 2 Query: 185 GLFKQVRELLNKEADP-DEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESI 601 G +VREL+ K D D K + KTA+ + K LL+ + I+ KDE G ALH++ N+ ++ + L S ++N NN TALH AVN ++ + ++ +N+ + + ++PL ++I Sbjct: 505 GSATKVRELVQKHPDKVDIKNQGKTALQVAAHQGHMEVVK----VLLQANSSIEAKDEDGDAALHYTAFGNQAEIARLLL-SKGANVNLLNNSMCTALHIAVNKG-----FTDVVRVLTEHSADVNLQDSYGDTPLHDAI 634
BLAST of SMED30032529 vs. Ensembl Cavefish
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:103034310]) HSP 1 Score: 53.1434 bits (126), Expect = 3.963e-7 Identity = 44/160 (27.50%), Postives = 77/160 (48.12%), Query Frame = 2 Query: 125 FKRSIFRNNQASSPAEAIYRGLFKQVRELLNKEADP-DEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESI 601 +S ++N EA + G +VREL+ K D D K + KTA+ + K LL+ + I+ KDE G ALH++ N+ ++ + L S ++N NN TALH AVN ++ + ++ +N+ + + ++PL ++I Sbjct: 425 LSQSTEQDNPGRLVIEAAH-GSATKVRELVQKHPDKVDIKNQGKTALQVAAHQGHMEVVK----VLLQANSSIEAKDEDGDAALHYTAFGNQAEIARLLL-SKGANVNLLNNSMCTALHIAVNKG-----FTDVVRVLTEHSADVNLQDSYGDTPLHDAI 573
BLAST of SMED30032529 vs. Ensembl Cavefish
Match: ankrd52a (ankyrin repeat domain 52a [Source:NCBI gene;Acc:553206]) HSP 1 Score: 52.7582 bits (125), Expect = 4.950e-7 Identity = 35/115 (30.43%), Postives = 55/115 (47.83%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDF 661 LL GA+ID+ + +G ALH + ++ + +N ++N NN G+T LH A S + LE L+ +N+ +K SPL + H F ++LI NG D Sbjct: 216 LLRNGAEIDEPNAFGNTALHVACYMGQEAVANELVNR-GANVNQPNNRGYTPLHLAAVSTNGALCLELLV----NNGADVNMQSKEGKSPLHMAAIHGRFTRSQILIQNGGEIDC 325
BLAST of SMED30032529 vs. Ensembl Cavefish
Match: ENSAMXT00000031513.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02002164.1:626:64909:-1 gene:ENSAMXG00000032083.1 transcript:ENSAMXT00000031513.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 52.373 bits (124), Expect = 5.313e-7 Identity = 35/114 (30.70%), Postives = 55/114 (48.25%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTD 658 LL GA+ID+ + +G ALH + ++ + +N ++N NN G+T LH A S + LE L+ +N+ +K SPL + H F ++LI NG D Sbjct: 219 LLRNGAEIDEPNAFGNTALHVACYTGQEAVANELVNR-GANVNQPNNRGYTPLHLAAVSTNGALCLELLV----NNGADVNMQSKEGKSPLHMAAIHGRFTRSQILIQNGGEID 327
BLAST of SMED30032529 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007449.1 (pep scaffold:Pmarinus_7.0:GL478728:201453:233342:1 gene:ENSPMAG00000006704.1 transcript:ENSPMAT00000007449.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 53.9138 bits (128), Expect = 4.705e-8 Identity = 33/120 (27.50%), Postives = 55/120 (45.83%), Query Frame = 2 Query: 305 LSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFK 664 ++ TLLEYGA+ + G LH + D+ + L + D+N G + LH A E K+ + E L+ K+ +N K +PL+ + + N V L+ +GA + K Sbjct: 261 IATTLLEYGAETNAITRQGVAPLHLGAQEGHADVASLLLARYA-DVNHATKSGLSPLHLAAQ-EDKVNVAEILV----KHGAHVNATTKLGYTPLIVACHYGNIKMVNFLLQHGADVNSK 374
BLAST of SMED30032529 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003991.1 (pep scaffold:Pmarinus_7.0:GL484476:255315:281660:1 gene:ENSPMAG00000003623.1 transcript:ENSPMAT00000003991.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 53.5286 bits (127), Expect = 6.001e-8 Identity = 37/116 (31.90%), Postives = 53/116 (45.69%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFK 664 LL+ G ID + +G ALH + N +D+V L ++N N GFT LH+A S LE L+ +N+ +K SPL + H F + LI NG D + Sbjct: 223 LLDLGVDIDDPNSFGNTALHVACY-NGQDVVVNELIDCGANVNQANERGFTPLHFAAASTHGALCLELLV----NNGADVNVQSKDGKSPLHMTAVHGRFTRSQTLIQNGGEIDCE 333
BLAST of SMED30032529 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007446.1 (pep scaffold:Pmarinus_7.0:GL478728:200023:240674:1 gene:ENSPMAG00000006704.1 transcript:ENSPMAT00000007446.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 48.9062 bits (115), Expect = 2.160e-6 Identity = 33/120 (27.50%), Postives = 55/120 (45.83%), Query Frame = 2 Query: 305 LSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFK 664 ++ TLLEYGA+ + G LH + D+ + L + D+N G + LH A E K+ + E L+ K+ +N K +PL+ + + N V L+ +GA + K Sbjct: 351 IATTLLEYGAETNAITRQGVAPLHLGAQEGHADVASLLLARYA-DVNHATKSGLSPLHLAAQ-EDKVNVAEILV----KHGAHVNATTKLGYTPLIVACHYGNIKMVNFLLQHGADVNSK 464
BLAST of SMED30032529 vs. Ensembl Yeast
Match: HOS4 (Subunit of the Set3 complex; complex is a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; potential Cdc28p substrate [Source:SGD;Acc:S000001374]) HSP 1 Score: 48.521 bits (114), Expect = 1.698e-6 Identity = 33/103 (32.04%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 347 KDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNI--LNKFNNSPLMESIRHLNFHAVEVLIDNGA 649 +D G L + K K D+V+ + +DIN ++N G TALH A + IEI+E LI + +NI + F ++PL+++ + + V+ L+ NGA Sbjct: 326 RDSGGRTRLQIACDKGKYDVVKKMIEEGGYDINDQDNAGNTALHEAA-LQGHIEIVELLI----ENGADVNIKSIEMFGDTPLIDASANGHLDVVKYLLKNGA 423
BLAST of SMED30032529 vs. Ensembl Nematostella
Match: EDO38263 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDI0]) HSP 1 Score: 66.2402 bits (160), Expect = 9.164e-12 Identity = 45/162 (27.78%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 173 AIYRGLFKQVR---ELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSF-DFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNG 646 A+ F+Q + E+ N + + ++ K +TA+M FL + A L+ LL +GA++ +D G AL ++ ++ LV + FD N + G TALHYA S + + +L ++ +K++K S + N +PL+ + + NF +L+ G Sbjct: 50 AVKSKRFRQAKILIEMGNIDVNARDETK-RTALMELCFLEEENKAAKLARMLLSHGARVGIRDTDGMTALSYAAKLGREQLVSAMMEEVHSFDPNAADKHGNTALHYASMSGNFV-VLNLILKTLKRFKLSADKPNNAGETPLICASKTGNFLCARILVSEG 209
BLAST of SMED30032529 vs. Ensembl Nematostella
Match: EDO41179 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S546]) HSP 1 Score: 62.3882 bits (150), Expect = 1.076e-10 Identity = 43/159 (27.04%), Postives = 88/159 (55.35%), Query Frame = 2 Query: 173 AIYRGLFKQVRELLNKEADPDEKI-KSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNG 646 AI + ++Q R L+ AD + + + +T +M F+ + A S++ LLE G + KD+ G AL ++ I KK L++ D+D+N + G TAL+YA+ + + ++E L+ ++K Y +++ +N+ +PL+ +++ ++L++ G Sbjct: 7 AIIQRRWRQARLLVEVGADVNRQGDEGRTPLMELCFVDNEDKACSMAKLLLENGGNVGIKDKQGKTALSYACILKKKKLLKWLTRFVDYDLNSTDLDGNTALNYAILAGDETVVME-LVRKLKAYGLTVDTINRKGETPLINALKSERTDIADILLEIG 164
BLAST of SMED30032529 vs. Ensembl Nematostella
Match: EDO42585 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S176]) HSP 1 Score: 54.299 bits (129), Expect = 1.513e-9 Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSF-DFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMES 598 L++ GAKI KD++G NA+ +V+ K+ L+ +FL F+IN ++ G TAL YA S IL L+ +K++ S+++ NK +PL+++ Sbjct: 8 LVDNGAKIALKDKHGRNAVMKAVLSEKEKLLTLFLTRVSSFNINDRDKKGNTALFYAA-SIGNFHILRKLVVVYRKFRLSVDVTNKDGMTPLIQA 101
BLAST of SMED30032529 vs. Ensembl Nematostella
Match: EDO33642 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRL7]) HSP 1 Score: 56.6102 bits (135), Expect = 1.047e-8 Identity = 40/166 (24.10%), Postives = 85/166 (51.20%), Query Frame = 2 Query: 158 SSPAEAIYRGLFKQVRELLNKEADPDEKIK--SKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYK-YSLNILNKFNNSPLMESIRHLNFHAVEVLIDNG 646 SS A+A+ F+Q + L+ D + + K ++ ++ + + D + + LL+ GA I +D++G NA + + + +FL DFD+N ++ G TAL YAV + I +++ +++K + + NK +PL+ + + + ++L+++G Sbjct: 2 SSLAKALEERRFRQAKLLVQLGDDLNSRSKETGRSPLVQASLIEDEDLSYKVCHWLLQEGADIAVRDDHGMNAFMHVCRQGRTRIAALFLKHRDFDLNTQDFEGNTALSYAVIA-GDISTTSAIVAELRKRRIRGADKQNKNGETPLIIAAKLGHKGCADILLNDG 166
BLAST of SMED30032529 vs. Ensembl Nematostella
Match: EDO32718 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SU82]) HSP 1 Score: 51.9878 bits (123), Expect = 4.536e-8 Identity = 45/169 (26.63%), Postives = 88/169 (52.07%), Query Frame = 2 Query: 170 EAIYRGLFKQVRELLNKEADPDEKI-KSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLN--SFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKY--SLNILNKFNN---SPLMESIRHLNFHAVEVLIDNGAR 652 A+ G QVR LL + + + + +TA++ C FL + +++ LL GAK++K+D G +AL ++ ++ D+V +N + D+N +N G T+L AV S +E++ L+ +++ + + +++ NN SPL+ + + VL+ GA+ Sbjct: 5 SAVRFGRTHQVRLLLKAGINTENRDDRGRTALVYCCFLKNPQTRQTILKLLLASGAKVNKRDHLGRSALLWACLQGLVDVVTSLVNDSQSEVDLNLTDNDGNTSLLLAVKS-GNLEMVRLLLSLLRRSLSNNTTSFIHRCNNRGISPLLAAFLRGDKDCARVLVQGGAQ 172
BLAST of SMED30032529 vs. Ensembl Medaka
Match: ENSORLT00000005069.2 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A [Source:NCBI gene;Acc:101168382]) HSP 1 Score: 53.5286 bits (127), Expect = 3.547e-7 Identity = 44/164 (26.83%), Postives = 71/164 (43.29%), Query Frame = 2 Query: 173 AIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFK 664 A Y G + V+ L+ A+ D K K + + + S LL G +++ + YG LH + N +D+V L ++N N GF+ALH+A +S E L+ + +N +K +PL + H F + LI NGA D + Sbjct: 223 AAYMGHLEVVKLLVESGAEVDCKDKKGYSPL---HAAASSGMSSTVHYLLGLGVHVNEANSYGNTPLHLACY-NGQDVVVGELIQAGANVNQVNERGFSALHFASSSRQGALCQELLL----AHGACINSRSKDGKTPLHMAATHGRFSCSQALIQNGAEVDCE 378
BLAST of SMED30032529 vs. Ensembl Medaka
Match: ENSORLT00000028696.1 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A [Source:NCBI gene;Acc:101168382]) HSP 1 Score: 53.1434 bits (126), Expect = 3.763e-7 Identity = 44/164 (26.83%), Postives = 71/164 (43.29%), Query Frame = 2 Query: 173 AIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFK 664 A Y G + V+ L+ A+ D K K + + + S LL G +++ + YG LH + N +D+V L ++N N GF+ALH+A +S E L+ + +N +K +PL + H F + LI NGA D + Sbjct: 180 AAYMGHLEVVKLLVESGAEVDCKDKKGYSPL---HAAASSGMSSTVHYLLGLGVHVNEANSYGNTPLHLACY-NGQDVVVGELIQAGANVNQVNERGFSALHFASSSRQGALCQELLL----AHGACINSRSKDGKTPLHMAATHGRFSCSQALIQNGAEVDCE 335
BLAST of SMED30032529 vs. Ensembl Medaka
Match: ENSORLT00000037670.1 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A [Source:NCBI gene;Acc:101168382]) HSP 1 Score: 53.1434 bits (126), Expect = 4.006e-7 Identity = 44/164 (26.83%), Postives = 71/164 (43.29%), Query Frame = 2 Query: 173 AIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFK 664 A Y G + V+ L+ A+ D K K + + + S LL G +++ + YG LH + N +D+V L ++N N GF+ALH+A +S E L+ + +N +K +PL + H F + LI NGA D + Sbjct: 180 AAYMGHLEVVKLLVESGAEVDCKDKKGYSPL---HAAASSGMSSTVHYLLGLGVHVNEANSYGNTPLHLACY-NGQDVVVGELIQAGANVNQVNERGFSALHFASSSRQGALCQELLL----AHGACINSRSKDGKTPLHMAATHGRFSCSQALIQNGAEVDCE 335
BLAST of SMED30032529 vs. Ensembl Medaka
Match: ENSORLT00000045754.1 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A [Source:NCBI gene;Acc:101168382]) HSP 1 Score: 53.1434 bits (126), Expect = 4.006e-7 Identity = 44/164 (26.83%), Postives = 71/164 (43.29%), Query Frame = 2 Query: 173 AIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFK 664 A Y G + V+ L+ A+ D K K + + + S LL G +++ + YG LH + N +D+V L ++N N GF+ALH+A +S E L+ + +N +K +PL + H F + LI NGA D + Sbjct: 180 AAYMGHLEVVKLLVESGAEVDCKDKKGYSPL---HAAASSGMSSTVHYLLGLGVHVNEANSYGNTPLHLACY-NGQDVVVGELIQAGANVNQVNERGFSALHFASSSRQGALCQELLL----AHGACINSRSKDGKTPLHMAATHGRFSCSQALIQNGAEVDCE 335
BLAST of SMED30032529 vs. Ensembl Medaka
Match: mib2 (mindbomb E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:101175479]) HSP 1 Score: 52.373 bits (124), Expect = 8.017e-7 Identity = 43/160 (26.88%), Postives = 76/160 (47.50%), Query Frame = 2 Query: 125 FKRSIFRNNQASSPAEAIYRGLFKQVRELLNKEADP-DEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESI 601 +S ++N EA + K VREL+ K D D K + KTA+ + K+L L+ ++ KDE G ALH++ N+ ++ + L S ++N NN TALH AVN ++ + ++ +N+ + + ++PL ++I Sbjct: 416 LSQSTEQDNPCRLVIEAAHGSAVK-VRELVQKHPDKVDIKNQGKTALQVAAHQGHMEVVKAL----LQANCSVEVKDEDGDTALHYAAFGNQAEIARLLL-SKGANVNLLNNSMCTALHIAVNKG-----FTDVVRVLTEHSADVNLQDSYGDTPLHDAI 564
BLAST of SMED30032529 vs. Planmine SMEST
Match: SMESG000077536.1 (SMESG000077536.1) HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0 Identity = 357/360 (99.17%), Postives = 358/360 (99.44%), Query Frame = 2 Query: 119 MNFKRSIFRNNQASSPAEAIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFKYEGLSFLDYFNNLKRKLKETPEYMXXXXXXXXXXXXXEELAMHDSIIRSVEQISIEEAPDFDIRNNSKWVVERPKSCITLHSFNENEESSWKTIMPIVLNQLEERISKSYRKNFSVEKIISNLKQFNHEAGDTTXXXXXXXXXXXXXXXXXXXXXXXXXXQDKLSKRSTNDGIKINKF 1198 MNFKRSIFRNNQASSPAEAIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDIN KNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKF+NSPLMESIRHLNFHA EVLIDNGARTDFKYEGLSFLDYFNNLKRKLKETPEYMINKIKKSIIINKNEELAMHDSIIRSVEQISIEEAPDFDIRNNSKWVVERPKSCITLHSFNENEESSWKTIMPIVLNQLEERISKSYRKNFSVEKIISNLKQFNHEAGDTTGKGRNGSSKKSNAKSKLNKKGSASSSQDKLSKRSTNDGIKINKF Sbjct: 1 MNFKRSIFRNNQASSPAEAIYRGLFKQVRELLNKEADPDEKIKSKTAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINSKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFSNSPLMESIRHLNFHAAEVLIDNGARTDFKYEGLSFLDYFNNLKRKLKETPEYMINKIKKSIIINKNEELAMHDSIIRSVEQISIEEAPDFDIRNNSKWVVERPKSCITLHSFNENEESSWKTIMPIVLNQLEERISKSYRKNFSVEKIISNLKQFNHEAGDTTGKGRNGSSKKSNAKSKLNKKGSASSSQDKLSKRSTNDGIKINKF 360
BLAST of SMED30032529 vs. Planmine SMEST
Match: SMESG000034080.1 (SMESG000034080.1) HSP 1 Score: 62.003 bits (149), Expect = 2.904e-10 Identity = 41/116 (35.34%), Postives = 68/116 (58.62%), Query Frame = 2 Query: 155 ASSPAEAIYRGLFKQVRELL-NKEADPDEKIKSK-TAIMLCTFLTDTFWAKSLSFTLLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSE 496 +S + I +G F Q ++ + N D +E ++K T ++LC+ + D W SL+ LLE GA I++ D+ N LH+ I +K+L+++ L S DF+IN + G + L YA+ SE Sbjct: 7 SSDICKLILKGYFAQAKDKIKNTNVDVNETNENKQTPLILCSLIEDPSWGISLAQLLLELGADIERADDNKMNVLHYCAIYQQKELLKLLLESVDFNINKGDILGNSPLIYAIVSE 122
BLAST of SMED30032529 vs. Planmine SMEST
Match: SMESG000058588.1 (SMESG000058588.1) HSP 1 Score: 56.225 bits (134), Expect = 3.834e-8 Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 2 Query: 317 LLEYGAKIDKK-DEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGAR-TDFKYEGLSFLDYFNNLK 706 L YGA + K ++ LH + I ++ +FL++ + +IN + T L YA +S I+ +ESLI + +N N N+PL E++RH N +E+LI +GA T GLS LD +LK Sbjct: 882 LFHYGADPNTKTNKLQLTPLHLAAIYGSIKVLNLFLHNANVNINAADKKLNTPLAYACAKDS-IDTVESLI----QAGALINTNNYKGNTPLHEAVRHNNASIIELLIKHGANITTLNANGLSPLDLSKDLK 1008
BLAST of SMED30032529 vs. Planmine SMEST
Match: SMESG000058588.1 (SMESG000058588.1) HSP 1 Score: 56.225 bits (134), Expect = 3.848e-8 Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 2 Query: 317 LLEYGAKIDKK-DEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGAR-TDFKYEGLSFLDYFNNLK 706 L YGA + K ++ LH + I ++ +FL++ + +IN + T L YA +S I+ +ESLI + +N N N+PL E++RH N +E+LI +GA T GLS LD +LK Sbjct: 902 LFHYGADPNTKTNKLQLTPLHLAAIYGSIKVLNLFLHNANVNINAADKKLNTPLAYACAKDS-IDTVESLI----QAGALINTNNYKGNTPLHEAVRHNNASIIELLIKHGANITTLNANGLSPLDLSKDLK 1028
BLAST of SMED30032529 vs. Planmine SMEST
Match: SMESG000026655.1 (SMESG000026655.1) HSP 1 Score: 49.6766 bits (117), Expect = 3.592e-6 Identity = 41/149 (27.52%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 317 LLEYGAKIDKKDEYGFNALHFSVIKNKKDLVEIFLNSFDFDINGKNNFGFTALHYAVNSESKIEILESLIFQMKKYKYSLNILNKFNNSPLMESIRHLNFHAVEVLIDNGARTDFK-YEGLSFLD------YFNNLK--RKLKETPEYM 736 LL+ A ++ + E G ALH + KN+ D+VE L + + DI+ K G+TALH AV+ +I+ ++ L+ + + +N + L + + + V +L+DN + + +GL+ L+ Y N + K+ PE M Sbjct: 717 LLDANADVNHQAENGLTALHLAAEKNRTDIVEQLLKT-EADISTKTQMGYTALHTAVHF-GQIQTVKMLL----EKNFDVNAQTNLGCTSLHLAAQQGHIAIVRLLLDNEIDVNHQNKQGLTALEVAQKQHYLNIAETLSKVTTVPEMM 859 The following BLAST results are available for this feature:
BLAST of SMED30032529 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SMED30032529 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30032529 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of SMED30032529 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SMED30032529 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SMED30032529 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SMED30032529 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30032529 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30032529 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SMED30032529 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of SMED30032529 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of SMED30032529 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of SMED30032529 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30032529 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30032529 ID=SMED30032529|Name=SMED30032529|organism=Schmidtea mediterranea sexual|type=transcript|length=1253bpback to top protein sequence of SMED30032529-orf-1 >SMED30032529-orf-1 ID=SMED30032529-orf-1|Name=SMED30032529-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=361bp MNFKRSIFRNNQASSPAEAIYRGLFKQVRELLNKEADPDEKIKSKTAIMLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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