Transformer-2 protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30032513 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Transformer-2 protein vs. Ensembl Human
Match: TRA2B (transformer 2 beta homolog [Source:HGNC Symbol;Acc:HGNC:10781]) HSP 1 Score: 107.457 bits (267), Expect = 1.869e-27 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G IA V ++ D+ + S G+ F+ +E++ A A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 14 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 110
BLAST of Transformer-2 protein vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645]) HSP 1 Score: 105.916 bits (263), Expect = 6.407e-27 Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F ++G ++ V ++ D+ S G+ F+ +E + + A++ A+GM LDG+ IRVDYSITK+AHTPTPG YMG+ Sbjct: 14 PDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 110
BLAST of Transformer-2 protein vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645]) HSP 1 Score: 105.916 bits (263), Expect = 6.576e-27 Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F ++G ++ V ++ D+ S G+ F+ +E + + A++ A+GM LDG+ IRVDYSITK+AHTPTPG YMG+ Sbjct: 14 PDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 110
BLAST of Transformer-2 protein vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645]) HSP 1 Score: 105.916 bits (263), Expect = 6.576e-27 Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F ++G ++ V ++ D+ S G+ F+ +E + + A++ A+GM LDG+ IRVDYSITK+AHTPTPG YMG+ Sbjct: 14 PDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 110
BLAST of Transformer-2 protein vs. Ensembl Human
Match: TRA2B (transformer 2 beta homolog [Source:HGNC Symbol;Acc:HGNC:10781]) HSP 1 Score: 107.842 bits (268), Expect = 1.425e-26 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G IA V ++ D+ + S G+ F+ +E++ A A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 114 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 protein vs. Ensembl Celegans
Match: rsp-8 (SR Protein (Splicing factor) [Source:UniProtKB/TrEMBL;Acc:G3MU77]) HSP 1 Score: 91.2781 bits (225), Expect = 8.072e-21 Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYM 575 P+P KC+GVF L+ T EK L + F +FG I L+ D+ S G+GFI + + AT A + +LDG IRVD+S+TK+ H+PTPG YM Sbjct: 72 PQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQYM 166
BLAST of Transformer-2 protein vs. Ensembl Celegans
Match: rsp-8 (SR Protein (Splicing factor) [Source:UniProtKB/TrEMBL;Acc:G3MU77]) HSP 1 Score: 91.2781 bits (225), Expect = 8.072e-21 Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYM 575 P+P KC+GVF L+ T EK L + F +FG I L+ D+ S G+GFI + + AT A + +LDG IRVD+S+TK+ H+PTPG YM Sbjct: 72 PQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQYM 166
BLAST of Transformer-2 protein vs. Ensembl Celegans
Match: exc-7 (pep chromosome:WBcel235:II:9575971:9581490:1 gene:WBGene00001368.1 transcript:F35H8.5.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:exc-7) HSP 1 Score: 57.7658 bits (138), Expect = 3.668e-9 Identity = 28/84 (33.33%), Postives = 49/84 (58.33%), Query Frame = 3 Query: 306 CIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTP 557 C+ V+ L+ T++ +LW+ F +FG I +VK++ D Q+ GY F++ + A A+ +G NL GK ++V + K+ TP Sbjct: 375 CLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVF----KSSTP 453 HSP 2 Score: 53.9138 bits (128), Expect = 7.955e-8 Identity = 28/66 (42.42%), Postives = 38/66 (57.58%), Query Frame = 3 Query: 336 TEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYS 533 T+E++ F G I S KL+ DK +SLGYGF+NY A RAV +G+ L K I+V Y+ Sbjct: 54 TQEEV-RSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYA 118
BLAST of Transformer-2 protein vs. Ensembl Celegans
Match: sup-12 (SUPpressor [Source:UniProtKB/TrEMBL;Acc:O45189]) HSP 1 Score: 52.7582 bits (125), Expect = 2.672e-8 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 3 Query: 309 IGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYS 533 I V GL T +K L E FE+FG I +I D+ Q+S GYGF+ +D SA RA K+ + + +DG+ V+ + Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPI-IDGRKANVNLA 110
BLAST of Transformer-2 protein vs. Ensembl Celegans
Match: sup-12 (SUPpressor [Source:UniProtKB/TrEMBL;Acc:O45189]) HSP 1 Score: 53.1434 bits (126), Expect = 6.180e-8 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 3 Query: 309 IGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYS 533 I V GL T +K L E FE+FG I +I D+ Q+S GYGF+ +D SA RA K+ + + +DG+ V+ + Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDPNPI-IDGRKANVNLA 110
BLAST of Transformer-2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089616) HSP 1 Score: 103.99 bits (258), Expect = 1.852e-26 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+ +CIGVFGLN T + + E F K+G I +++++D Q S G+ FI +E L A A SG+ +DG+ IRVD+SIT++AHTPTPG Y+G+ Sbjct: 8 PQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 104
BLAST of Transformer-2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089615) HSP 1 Score: 103.605 bits (257), Expect = 6.655e-26 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+ +CIGVFGLN T + + E F K+G I +++++D Q S G+ FI +E L A A SG+ +DG+ IRVD+SIT++AHTPTPG Y+G+ Sbjct: 55 PQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 151
BLAST of Transformer-2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089619) HSP 1 Score: 103.605 bits (257), Expect = 6.655e-26 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+ +CIGVFGLN T + + E F K+G I +++++D Q S G+ FI +E L A A SG+ +DG+ IRVD+SIT++AHTPTPG Y+G+ Sbjct: 55 PQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 151
BLAST of Transformer-2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089620) HSP 1 Score: 103.605 bits (257), Expect = 1.489e-25 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+ +CIGVFGLN T + + E F K+G I +++++D Q S G+ FI +E L A A SG+ +DG+ IRVD+SIT++AHTPTPG Y+G+ Sbjct: 93 PQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 189
BLAST of Transformer-2 protein vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089621) HSP 1 Score: 103.605 bits (257), Expect = 1.489e-25 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+ +CIGVFGLN T + + E F K+G I +++++D Q S G+ FI +E L A A SG+ +DG+ IRVD+SIT++AHTPTPG Y+G+ Sbjct: 93 PQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 189
BLAST of Transformer-2 protein vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 107.457 bits (267), Expect = 1.809e-27 Identity = 47/97 (48.45%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F ++G +A V ++ D+ S G+ F+ +E + A A++ A+GM LDG+ IRVDYSITK+ HTPTPG YMG+ Sbjct: 102 PDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 198
BLAST of Transformer-2 protein vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 107.457 bits (267), Expect = 1.809e-27 Identity = 47/97 (48.45%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F ++G +A V ++ D+ S G+ F+ +E + A A++ A+GM LDG+ IRVDYSITK+ HTPTPG YMG+ Sbjct: 102 PDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 198
BLAST of Transformer-2 protein vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 107.842 bits (268), Expect = 1.179e-26 Identity = 47/97 (48.45%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F ++G +A V ++ D+ S G+ F+ +E + A A++ A+GM LDG+ IRVDYSITK+ HTPTPG YMG+ Sbjct: 131 PDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 227
BLAST of Transformer-2 protein vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 107.071 bits (266), Expect = 1.844e-26 Identity = 47/97 (48.45%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F ++G +A V ++ D+ S G+ F+ +E + A A++ A+GM LDG+ IRVDYSITK+ HTPTPG YMG+ Sbjct: 131 PDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 227
BLAST of Transformer-2 protein vs. Ensembl Zebrafish
Match: tra2b (transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]) HSP 1 Score: 102.834 bits (255), Expect = 5.705e-25 Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G ++ V ++ D+ + S G+ F+ +E+ + A + A+GM LDG+ IRVDYSITK+ HTPTPG YMG+ Sbjct: 119 PDPNCCLGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFAFVYFENREDSKEAKERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 215
BLAST of Transformer-2 protein vs. Ensembl Xenopus
Match: rit1 (Ras-like without CAAX 1 [Source:Xenbase;Acc:XB-GENE-5777077]) HSP 1 Score: 107.071 bits (266), Expect = 5.176e-26 Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G I+ V ++ D+ + S G+ F+ +E++ A A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 149 PDPNCCLGVFGLSLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 245
BLAST of Transformer-2 protein vs. Ensembl Xenopus
Match: plekhg5 (pleckstrin homology and RhoGEF domain containing G5 [Source:Xenbase;Acc:XB-GENE-6039487]) HSP 1 Score: 105.916 bits (263), Expect = 6.055e-26 Identity = 47/100 (47.00%), Postives = 70/100 (70.00%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSN 590 P+P CIGVFGL+ T E+ L E F ++G ++ V ++ D+ S G+ F+ +E + + A++ A+GM LDG+ IRVDYSITK+AHTPTPG YMG+ ++ Sbjct: 110 PDPNICIGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 209
BLAST of Transformer-2 protein vs. Ensembl Xenopus
Match: ENSXETT00000018356.1 (RNA binding motif protein X-linked [Source:NCBI gene;Acc:100135403]) HSP 1 Score: 57.3806 bits (137), Expect = 1.241e-8 Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 3 Query: 315 VFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVD 527 + GLN T EK L F K+GR+ V L+ D+ +S G+ F+ +E A A +E +G LDGK I+V+ Sbjct: 12 IGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARELNGKALDGKPIKVE 82
BLAST of Transformer-2 protein vs. Ensembl Xenopus
Match: cirbp (cold inducible RNA binding protein [Source:NCBI gene;Acc:549982]) HSP 1 Score: 55.4546 bits (132), Expect = 1.292e-8 Identity = 27/71 (38.03%), Postives = 45/71 (63.38%), Query Frame = 3 Query: 315 VFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVD 527 V GLN T E+ L + F K+G++A V ++ D+ + S G+GF+ +E+ A A+ +G ++DG+ IRVD Sbjct: 10 VGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVD 80
BLAST of Transformer-2 protein vs. Ensembl Xenopus
Match: cirbp (cold inducible RNA binding protein [Source:NCBI gene;Acc:549982]) HSP 1 Score: 55.0694 bits (131), Expect = 1.344e-8 Identity = 27/71 (38.03%), Postives = 45/71 (63.38%), Query Frame = 3 Query: 315 VFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVD 527 V GLN T E+ L + F K+G++A V ++ D+ + S G+GF+ +E+ A A+ +G ++DG+ IRVD Sbjct: 22 VGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVD 92
BLAST of Transformer-2 protein vs. Ensembl Mouse
Match: Tra2b (transformer 2 beta [Source:MGI Symbol;Acc:MGI:106016]) HSP 1 Score: 107.457 bits (267), Expect = 1.283e-27 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G IA V ++ D+ + S G+ F+ +E++ A A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 14 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 110
BLAST of Transformer-2 protein vs. Ensembl Mouse
Match: Tra2b (transformer 2 beta [Source:MGI Symbol;Acc:MGI:106016]) HSP 1 Score: 107.842 bits (268), Expect = 9.786e-27 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G IA V ++ D+ + S G+ F+ +E++ A A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 114 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 protein vs. Ensembl Mouse
Match: Tra2a (transformer 2 alpha [Source:MGI Symbol;Acc:MGI:1933972]) HSP 1 Score: 106.301 bits (264), Expect = 2.924e-26 Identity = 46/100 (46.00%), Postives = 70/100 (70.00%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSN 590 P+P C+GVFGL+ T E+ L E F ++G ++ V ++ D+ S G+ F+ +E + + A++ A+GM LDG+ IRVDYSITK+AHTPTPG YMG+ ++ Sbjct: 113 PDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 212
BLAST of Transformer-2 protein vs. Ensembl Mouse
Match: Tra2a (transformer 2 alpha [Source:MGI Symbol;Acc:MGI:1933972]) HSP 1 Score: 106.301 bits (264), Expect = 3.039e-26 Identity = 46/100 (46.00%), Postives = 70/100 (70.00%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSN 590 P+P C+GVFGL+ T E+ L E F ++G ++ V ++ D+ S G+ F+ +E + + A++ A+GM LDG+ IRVDYSITK+AHTPTPG YMG+ ++ Sbjct: 113 PDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTH 212
BLAST of Transformer-2 protein vs. Ensembl Mouse
Match: Gm29289 (predicted gene 29289 [Source:MGI Symbol;Acc:MGI:5579995]) HSP 1 Score: 63.5438 bits (153), Expect = 1.051e-11 Identity = 34/84 (40.48%), Postives = 51/84 (60.71%), Query Frame = 3 Query: 309 IGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPT 560 I + GLN +T +K L E F +FG +A V L+ D+ ++S G+ F+ + L A AVKE +G+ LDGK I+V K+A P+ Sbjct: 10 IFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKV-----KQARRPS 88
BLAST of Transformer-2 protein vs. UniProt/SwissProt
Match: sp|O02008|TRA2_DROVI (Transformer-2 sex-determining protein OS=Drosophila virilis OX=7244 GN=tra2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.866e-27 Identity = 49/99 (49.49%), Postives = 69/99 (69.70%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVS 587 P+ +CIGVFGLN T ++ + E F KFG I +++++D + S G+ FI +E+LG A A +GM +DG+ IRVDYSIT++AHTPTPG YMG+ S Sbjct: 101 PQASRCIGVFGLNTNTTQQKVRELFNKFGPIERIQMVIDAHTHRSRGFCFIYFENLGDARVAKDACTGMEVDGRRIRVDYSITQRAHTPTPGVYMGRPS 199
BLAST of Transformer-2 protein vs. UniProt/SwissProt
Match: sp|P62997|TRA2B_RAT (Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.845e-26 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G IA V ++ D+ + S G+ F+ +E++ A A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 114 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 protein vs. UniProt/SwissProt
Match: sp|P62996|TRA2B_MOUSE (Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.845e-26 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G IA V ++ D+ + S G+ F+ +E++ A A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 114 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 protein vs. UniProt/SwissProt
Match: sp|P62995|TRA2B_HUMAN (Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.845e-26 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G IA V ++ D+ + S G+ F+ +E++ A A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 114 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 protein vs. UniProt/SwissProt
Match: sp|Q3ZBT6|TRA2B_BOVIN (Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.845e-26 Identity = 48/97 (49.48%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G IA V ++ D+ + S G+ F+ +E++ A A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 114 PDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 protein vs. TrEMBL
Match: A0A1Y1XIL0 (RNA-binding domain-containing protein OS=Anaeromyces robustus OX=1754192 GN=BCR32DRAFT_216915 PE=4 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 8.053e-28 Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKV 584 PEPCK +GVFGL+ RT E L E F K+G+ V +I ++ ES GYGF+ +E+L AT A +E +G+NLDG+ IRVDYSITK+AH PTPG YMG + Sbjct: 149 PEPCKVLGVFGLSSRTREDDLEEKFGKYGKTEKVIIIYNQKSNESRGYGFVYFENLDDATNARRELNGINLDGRKIRVDYSITKRAHNPTPGMYMGNI 246
BLAST of Transformer-2 protein vs. TrEMBL
Match: A0A4P9YGI2 (RNA-binding domain-containing protein OS=Rozella allomycis (strain CSF55) OX=988480 GN=ROZALSC1DRAFT_15966 PE=4 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 9.967e-27 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 297 PCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVS 587 PCK IGVFGL+ RT E+ L E F +FG+I + L+ DK + S G+GFINY + A AVK+ASG +DG+ IRVD+S TKK HTPTPG Y G+VS Sbjct: 74 PCKVIGVFGLSLRTTERDLEEVFNQFGKIEQITLVHDK-DRRSRGFGFINYSTISEAEEAVKKASGTLMDGREIRVDFSATKKPHTPTPGEYRGRVS 169
BLAST of Transformer-2 protein vs. TrEMBL
Match: A0A075API6 (RNA recognition motif domain-containing protein OS=Rozella allomycis (strain CSF55) OX=988480 GN=O9G_004281 PE=4 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.601e-26 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 297 PCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVS 587 PCK IGVFGL+ RT E+ L E F +FG+I + L+ DK + S G+GFINY + A AVK+ASG +DG+ IRVD+S TKK HTPTPG Y G+VS Sbjct: 56 PCKVIGVFGLSLRTTERDLEEVFNQFGKIEQITLVHDK-DRRSRGFGFINYSTISEAEEAVKKASGTLMDGREIRVDFSATKKPHTPTPGEYRGRVS 151
BLAST of Transformer-2 protein vs. TrEMBL
Match: A0A3R7LVI2 (Transformer-2 protein OS=Penaeus vannamei OX=6689 GN=C7M84_017849 PE=4 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.877e-26 Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSN 590 PEP KC+GVFGL+ T E+ L+ F+KFG + V++++D +S G+ F+ +E L A+ A E SGM +DG+ IRVDYSITK+ HTPTPG YMG+ ++ Sbjct: 78 PEPSKCLGVFGLSVHTTERQLYTIFDKFGPLEKVQVVLDSKTGKSRGFAFVYFESLKDASEAKNECSGMEIDGRRIRVDYSITKRPHTPTPGIYMGRPTS 177
BLAST of Transformer-2 protein vs. TrEMBL
Match: A0A3Q2YA89 (RRM domain-containing protein OS=Hippocampus comes OX=109280 PE=4 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.949e-26 Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVS 587 P+P KC+GVFGL+ T + L F ++GR+ V ++ + S GY F+ +E L + A++ A+GM +DG+VIRVDYSITK+AHTPTPG YMGK S Sbjct: 14 PDPSKCLGVFGLSLETTARDLRHVFSQYGRLTGVNVVFHQRSGRSRGYAFVYFERLEDSKEAMERANGMEIDGRVIRVDYSITKRAHTPTPGIYMGKQS 112
BLAST of Transformer-2 protein vs. Ensembl Cavefish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 106.301 bits (264), Expect = 7.233e-27 Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F ++G +A V ++ D+ S G+ F+ +E + + A++ A+GM LDG+ IRVDYSITK+ HTPTPG YMG+ Sbjct: 131 PDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 227
BLAST of Transformer-2 protein vs. Ensembl Cavefish
Match: ENSAMXT00000034164.1 (pep primary_assembly:Astyanax_mexicanus-2.0:12:6544829:6548035:1 gene:ENSAMXG00000039469.1 transcript:ENSAMXT00000034164.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 104.375 bits (259), Expect = 1.346e-26 Identity = 46/97 (47.42%), Postives = 68/97 (70.10%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G ++SV ++ D+ + S G+ F+ +E+ + A + A+GM LDG+ IRVDYSIT++ HTPTPG YMG+ Sbjct: 14 PDPNCCLGVFGLSLYTTERDLREVFSKYGPLSSVSIVYDQQSRRSRGFAFVYFENREDSREAKERANGMELDGRRIRVDYSITQRPHTPTPGIYMGR 110
BLAST of Transformer-2 protein vs. Ensembl Cavefish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 105.531 bits (262), Expect = 2.158e-26 Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F ++G +A V ++ D+ S G+ F+ +E + + A++ A+GM LDG+ IRVDYSITK+ HTPTPG YMG+ Sbjct: 103 PDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 199
BLAST of Transformer-2 protein vs. Ensembl Cavefish
Match: tra2b (transformer-2 protein homolog alpha-like [Source:NCBI gene;Acc:103029311]) HSP 1 Score: 103.605 bits (257), Expect = 3.019e-25 Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G +A V ++ D+ + S G+ F+ +E+ + A + A+GM LDG+ IRVD+SITK+ HTPTPG YMG+ Sbjct: 114 PDPTCCLGVFGLSLYTTERDLREVFSKYGPLADVCIVYDQQSRRSRGFAFVYFENREDSQEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 protein vs. Ensembl Cavefish
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:103022315]) HSP 1 Score: 67.0106 bits (162), Expect = 5.283e-12 Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 315 VFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVD 527 + GLN T EK L F KFGRI+ V L+ D+ +S G+ F+ YE+ G A A +E +G LDGK I+V+ Sbjct: 12 IGGLNTETTEKALESYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAARELNGKALDGKPIKVE 82
BLAST of Transformer-2 protein vs. Ensembl Sea Lamprey
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 105.145 bits (261), Expect = 1.013e-26 Identity = 47/97 (48.45%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T EK L E F ++G + SV ++ D+ S G+ F+ +++ A A + A+GM LDG+ IRVD+SITK+AHTPTPG YMG+ Sbjct: 108 PDPSCCLGVFGLSLHTGEKDLKEVFSRYGPVQSVNVVYDQQSGRSRGFAFVYFDNSEDAKEAKERANGMELDGRYIRVDFSITKRAHTPTPGIYMGR 204
BLAST of Transformer-2 protein vs. Ensembl Sea Lamprey
Match: tra2b (transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]) HSP 1 Score: 98.9821 bits (245), Expect = 2.676e-24 Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVS 587 PEP C+GVFGL+ T E L E F ++G +A V ++ D+ G+ F+ +++ + A + +GM LDG+ IRVD+SITK+AHTPTPG YMG+ S Sbjct: 102 PEPNTCLGVFGLSLYTTEHDLREVFGRYGPVADVNVVYDQQSGRPRGFAFVYMQNMEDSKEAKERVNGMELDGRNIRVDFSITKRAHTPTPGIYMGRPS 200
BLAST of Transformer-2 protein vs. Ensembl Sea Lamprey
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:321860]) HSP 1 Score: 58.9214 bits (141), Expect = 4.880e-10 Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 3 Query: 294 EPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPG 566 +P K V GLN T EK L TF K+GR+A V L+ D+ S G+ F+ + + A A ++A+G L+G+ +RVD TK + PG Sbjct: 5 DPGKLF-VGGLNIDTTEKALEATFSKYGRVADVLLMKDRETNLSRGFAFVTFANPEDAKEAERDANGKVLEGRAMRVD-QATKPSFESFPG 93
BLAST of Transformer-2 protein vs. Ensembl Sea Lamprey
Match: srsf2b (serine and arginine rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]) HSP 1 Score: 56.9954 bits (136), Expect = 6.773e-10 Identity = 29/100 (29.00%), Postives = 51/100 (51.00%), Query Frame = 3 Query: 297 PCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSNRR 596 P + + V L RT ++L +FEK+G + V + D++ +ES G+ F+ + D A A+ G LDG+ +RV + + P Y+ + + RR Sbjct: 6 PSRALQVDNLTYRTSPEMLRRSFEKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDAMDAMDGKMLDGRELRVQVARYSRPADP---YFQRRAAPRR 102
BLAST of Transformer-2 protein vs. Ensembl Sea Lamprey
Match: RBM39 (RNA binding motif protein 39 [Source:HGNC Symbol;Acc:HGNC:15923]) HSP 1 Score: 51.2174 bits (121), Expect = 1.929e-7 Identity = 24/72 (33.33%), Postives = 42/72 (58.33%), Query Frame = 3 Query: 315 VFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDY 530 V L+ E +L FE FG+I +++L+MD S G+GFI + A +A+++ +G L G+ ++V+Y Sbjct: 276 VGSLHFNITEAMLMGIFEPFGKIDNIQLMMDPETGRSKGFGFITFSSADCAKKALEQLNGFELAGRPMKVNY 347
BLAST of Transformer-2 protein vs. Ensembl Yeast
Match: PAB1 (Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967]) HSP 1 Score: 49.6766 bits (117), Expect = 3.244e-7 Identity = 27/79 (34.18%), Postives = 49/79 (62.03%), Query Frame = 3 Query: 309 IGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKK 545 I + L+ + K L++TF FG I S K+ D+ + +S G+GF+++E+ G+A A+ +GM L+G+ I V +++K Sbjct: 128 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRK 205
BLAST of Transformer-2 protein vs. Ensembl Yeast
Match: RIE1 (Putative RNA binding protein; localizes to stress granules induced by glucose deprivation; interacts with Rbg1p in a two-hybrid assay; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003482]) HSP 1 Score: 48.521 bits (114), Expect = 7.937e-7 Identity = 24/61 (39.34%), Postives = 37/61 (60.66%), Query Frame = 3 Query: 363 FEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKK 545 F K+G I S+KLI DK E GYGFI+Y A+ +KE +G ++G + ++Y + +K Sbjct: 215 FSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKELNGRTVNGSTLFINYHVERK 275
BLAST of Transformer-2 protein vs. Ensembl Yeast
Match: HRP1 (Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability [Source:SGD;Acc:S000005483]) HSP 1 Score: 47.7506 bits (112), Expect = 1.241e-6 Identity = 32/97 (32.99%), Postives = 48/97 (49.48%), Query Frame = 3 Query: 294 EPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKV 584 E CK + GLN T E L E F K+G + +K++ D S G+GF+++E S VK + LDGKVI +I + T ++G + Sbjct: 157 ESCKMF-IGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK--TQHILDGKVIDPKRAIPRDEQDKTGKIFVGGI 250
BLAST of Transformer-2 protein vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391]) HSP 1 Score: 46.9802 bits (110), Expect = 1.956e-6 Identity = 26/85 (30.59%), Postives = 47/85 (55.29%), Query Frame = 3 Query: 294 EPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKA 548 EP I V L+ +++ L + FE G + ++I ++ S GYG++++E+ A +A++E G +DG+ I D S +K A Sbjct: 166 EPA-TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPA 249
BLAST of Transformer-2 protein vs. Ensembl Nematostella
Match: EDO44802 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUS7]) HSP 1 Score: 110.153 bits (274), Expect = 3.505e-29 Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSN 590 P P +C+GVFGL+ T E+ L FEK+G + +++++ D S G+GF+ YED A A + +G+ LDG+ IRVDYS+TK+AHTPTPG YMGK S Sbjct: 91 PSPSRCLGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYDHQTGRSRGFGFVYYEDTKDAEVAKERTTGIELDGRRIRVDYSVTKRAHTPTPGVYMGKASQ 190
BLAST of Transformer-2 protein vs. Ensembl Nematostella
Match: EDO29519 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T3E7]) HSP 1 Score: 50.447 bits (119), Expect = 1.041e-7 Identity = 23/81 (28.40%), Postives = 45/81 (55.56%), Query Frame = 3 Query: 315 VFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTP 557 ++ L + + L +TF+ FG + S K+ +DK S +GF++Y+++ SA A++ +G + K ++V K A+ P Sbjct: 78 IYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPKDANRP 158
BLAST of Transformer-2 protein vs. Ensembl Nematostella
Match: EDO34879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN30]) HSP 1 Score: 51.6026 bits (122), Expect = 1.452e-7 Identity = 22/57 (38.60%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 363 FEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYS 533 F G + S KLI D+ +SLGY F+NY++ A +AV+E +G L K ++V ++ Sbjct: 30 FGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFA 86 HSP 2 Score: 47.3654 bits (111), Expect = 3.481e-6 Identity = 24/79 (30.38%), Postives = 41/79 (51.90%), Query Frame = 3 Query: 306 CIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITK 542 CI V+GL + L++ F +G I +++L +DK GYGF+N + A A+ +G GK+++V + K Sbjct: 256 CIFVYGLPQEATPLFLYKLFSPYGAITNIELKLDK------GYGFVNMSNYEEACHAICCLNGTPQHGKILQVSFKTPK 328
BLAST of Transformer-2 protein vs. Ensembl Nematostella
Match: EDO29715 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T2V2]) HSP 1 Score: 46.2098 bits (108), Expect = 5.535e-7 Identity = 24/65 (36.92%), Postives = 39/65 (60.00%), Query Frame = 3 Query: 339 EEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYS 533 EE L FE++G + SVK+I DK+ S G+GF+ + A +A+ E +G ++G+ I V+ S Sbjct: 13 EEADLRGFFEEYGAVDSVKIISDKFTGRSKGFGFVEMPNDAEAQKAIDELNGGTVEGRTIVVNKS 77
BLAST of Transformer-2 protein vs. Ensembl Nematostella
Match: EDO30576 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T0E1]) HSP 1 Score: 50.0618 bits (118), Expect = 6.593e-7 Identity = 23/81 (28.40%), Postives = 45/81 (55.56%), Query Frame = 3 Query: 315 VFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTP 557 ++ L + + L +TF+ FG + S K+ +DK S +GF++Y+++ SA A++ +G + K ++V K A+ P Sbjct: 374 IYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPKDANRP 454
BLAST of Transformer-2 protein vs. Ensembl Medaka
Match: tra2a (transformer-2 protein homolog alpha [Source:NCBI gene;Acc:101157868]) HSP 1 Score: 114.39 bits (285), Expect = 2.005e-29 Identity = 48/97 (49.48%), Postives = 67/97 (69.07%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGLN T E+ L E F ++GR+ + ++ D+ S G+ FI +E L A A++ +GMN+DG+ IRVDYSITK+ HTPTPG YMG+ Sbjct: 105 PDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201
BLAST of Transformer-2 protein vs. Ensembl Medaka
Match: tra2a (transformer 2a [Source:NCBI gene;Acc:100049284]) HSP 1 Score: 106.301 bits (264), Expect = 2.625e-26 Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGK 581 P+P C+GVFGL+ T E+ L E F K+G ++ V ++ D+ + S G+ F+ +E+ + A ++A+GM LDG+ IRVD+SITK+AHTPTPG YMG+ Sbjct: 111 PDPSCCLGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGMELDGRRIRVDFSITKRAHTPTPGIYMGR 207
BLAST of Transformer-2 protein vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285]) HSP 1 Score: 103.219 bits (256), Expect = 4.237e-25 Identity = 45/95 (47.37%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYM 575 P+P C+GVFGL+ T E+ L + F K+G +A V ++ D+ + S G+ F+ +E+ A A ++A+GM LDG+ IRVD+SITK+ HTPTPG YM Sbjct: 118 PDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIYM 212
BLAST of Transformer-2 protein vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285]) HSP 1 Score: 102.449 bits (254), Expect = 9.076e-25 Identity = 45/95 (47.37%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYM 575 P+P C+GVFGL+ T E+ L + F K+G +A V ++ D+ + S G+ F+ +E+ A A ++A+GM LDG+ IRVD+SITK+ HTPTPG YM Sbjct: 127 PDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIYM 221
BLAST of Transformer-2 protein vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285]) HSP 1 Score: 102.064 bits (253), Expect = 1.015e-24 Identity = 45/95 (47.37%), Postives = 66/95 (69.47%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYM 575 P+P C+GVFGL+ T E+ L + F K+G +A V ++ D+ + S G+ F+ +E+ A A ++A+GM LDG+ IRVD+SITK+ HTPTPG YM Sbjct: 113 PDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIYM 207
BLAST of Transformer-2 protein vs. Planmine SMEST
Match: SMESG000052829.1 (SMESG000052829.1) HSP 1 Score: 229.18 bits (583), Expect = 6.380e-74 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 3 Query: 207 TTSNDXXXXXXXXXXXXXXXXXXXXXXXPEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSNRRNXXXXXXXXXXXXXXXSPYKSQ 662 TTSNDRNYSRSFSRSPSRNNRRNRMNERPEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSNRRNGRDYHRRSRSHDGRRSPYKSQ Sbjct: 45 TTSNDRNYSRSFSRSPSRNNRRNRMNERPEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSNRRNGRDYHRRSRSHDGRRSPYKSQ 196
BLAST of Transformer-2 protein vs. Planmine SMEST
Match: SMESG000052833.1 (SMESG000052833.1) HSP 1 Score: 178.333 bits (451), Expect = 3.388e-54 Identity = 83/103 (80.58%), Postives = 90/103 (87.38%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSNRRN 599 PEPC CIGVFGL+KRT+E+ L ETFEKFGRI +V LIMDKY ESLGYGFINYEDL SATRA+KE +GMN+DGK IRVDYSITKKAHTPTPG Y GK SNRRN Sbjct: 70 PEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTSNRRN 172
BLAST of Transformer-2 protein vs. Planmine SMEST
Match: SMESG000052838.1 (SMESG000052838.1) HSP 1 Score: 146.747 bits (369), Expect = 1.531e-40 Identity = 66/102 (64.71%), Postives = 84/102 (82.35%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGY-YMGKVSNR 593 P+P CIG+FGL+K+T E+ LW+TF FG+I SV LI+DK+ +ESLG+ FINYE+L SAT A+KE +GM LD KV+RVDYSITKKA+TPTPG Y GK++NR Sbjct: 56 PDPSTCIGIFGLSKKTSERTLWKTFGNFGKIKSVSLIVDKFTKESLGFAFINYEELDSATNAIKETNGMTLDSKVVRVDYSITKKAYTPTPGSGYKGKITNR 157
BLAST of Transformer-2 protein vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1) HSP 1 Score: 126.331 bits (316), Expect = 1.669e-34 Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSNRR 596 P+P CIGVFGL+ +T+EK L+ F+K+G I V+L++D Y S G+GFI YE++ SA A A G+ +DG+V+R+DYSIT+KAHTPTPG Y+GK S RR Sbjct: 83 PKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKSTRR 184
BLAST of Transformer-2 protein vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1) HSP 1 Score: 126.331 bits (316), Expect = 1.805e-34 Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 3 Query: 291 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVSNRR 596 P+P CIGVFGL+ +T+EK L+ F+K+G I V+L++D Y S G+GFI YE++ SA A A G+ +DG+V+R+DYSIT+KAHTPTPG Y+GK S RR Sbjct: 84 PKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKSTRR 185 The following BLAST results are available for this feature:
BLAST of Transformer-2 protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Transformer-2 protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Transformer-2 protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Transformer-2 protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Transformer-2 protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Transformer-2 protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Transformer-2 protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Transformer-2 protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Transformer-2 protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Transformer-2 protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Transformer-2 protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 4
BLAST of Transformer-2 protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Transformer-2 protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Transformer-2 protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30032513 ID=SMED30032513|Name=Transformer-2 protein|organism=Schmidtea mediterranea sexual|type=transcript|length=995bpback to top protein sequence of SMED30032513-orf-1 >SMED30032513-orf-1 ID=SMED30032513-orf-1|Name=SMED30032513-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=262bp MTKSGKYSSDYSGGDSRSSERSYRTKSSKSRSRSNSNERIARRRTTSNDRback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
|