Protocadherin

Overview
NameProtocadherin
Smed IDSMED30032484
Length (bp)3998
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Protocadherin (SMED30032484) t-SNE clustered cells

Violin plots show distribution of expression levels for Protocadherin (SMED30032484) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Protocadherin (SMED30032484) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Protocadherin (SMED30032484) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30032484

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30032484SMESG000072088.1 SmedASXL_014322SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
nervous systemSMED30032484SMESG000072088.1 dd_Smed_v4_13570_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
anterior sideSMED30032484SMESG000072088.1 dd_Smed_v4_13570_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30032484SMESG000072088.1 dd_Smed_v4_13570_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30032484SMESG000072099.1 dd_Smed_v4_7966_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30032484SMESG000072099.1 dd_Smed_v4_7966_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30032484SMESG000072099.1 dd_Smed_v4_7966_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30032484SMESG000072088.1 dd_Smed_v6_13570_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813])

HSP 1 Score: 218.394 bits (555), Expect = 3.020e-57
Identity = 233/814 (28.62%), Postives = 378/814 (46.44%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDGR--YNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPP---PQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPTPKSSAVSVQI 3296
            I  VL+V  +   G +  ++   EE+  N LIG+L   L+  ++    L+      + +KT D  L+               IDRE++C+   ++  C   + +     +    + +   + DINDN P F    I   + EN+ A  S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F++   E +I EN PV   V ++ ATDAD  EN K+++ F   SN    +A   F +   +  G I +K+ LD + TP       +V A D G  P  +R  V + + DVND  P I + YI N    +++  + EN  +N  IA ++V DKD+   G V C+             D E    +R+     +Q  ++++N    D E       K++  D        + P  L   A + + + DENDN P + +S   F +  + P N+   ++L  +  +D D G       ++ P    E +    +G L +V   DRE  +     I A   +G       V++ V I+D+ND +PVF+ + Y+F   EN      VG +  TD D      +   I   +  F+I+S++G+IR     DRE++E Y   + A D         R+ +  V++ V+D+NDN P    PP     +LV+  +N   G  VF + A D D   N  V Y I+  +  +LF+ID ++GN+ ++ K  +++  L   H VLV A+D G P    S V V +
Sbjct:   41 IFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS-AINSKYTLPAAVDPDVGINGVQNYELIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSF---SNLVSNIARRLFHL--NATTGLITIKEPLDREETP---NHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVN--PVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCF------------TDHEI--PFRLRPVFSNQ--FLLENAAYLDYESTKEYAIKLLAAD------AGKPP--LNQSAMLFIKVKDENDNAPVFTQS---FVTV-SIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK-DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKANDLGQPDSLFSVVIVNL 802
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813])

HSP 1 Score: 218.009 bits (554), Expect = 3.374e-57
Identity = 233/814 (28.62%), Postives = 377/814 (46.31%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDGR--YNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPP---PQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPTPKSSAVSVQI 3296
            I  VL+V  +   G +  ++   EE+  N LIG+L   L+  ++    L+      + +KT D  L+               IDRE++C+   ++  C   + +     +    + +   + DINDN P F    I   + EN+ A  S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F++   E +I EN PV   V ++ ATDAD  EN K+++ F   SN    +A   F +   +  G I +K+ LD + TP       +V A D G  P  +R  V + + DVND  P I + YI N    +++  + EN  +N  IA ++V DKD+   G V C+             D E    +R+     +Q  ++++N    D E       K++  D        + P  L   A + + + DENDN P + +S   F +  + P N+   ++L  +  +D D G       ++ P    E +    +G L +V   DRE  +     I A   +G       V++ V I+D+ND +PVF+ + Y+F   EN      VG +  TD D      +   I   +  F+I+S++G+IR     DRE++E Y   + A D         R+ +  V++ V+D+NDN P    PP     +LV+  +N   G  VF + A D D   N  V Y I+     +LF+ID ++GN+ ++ K  +++  L   H VLV A+D G P    S V V +
Sbjct:   30 IFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS-AINSKYTLPAAVDPDVGINGVQNYELIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSF---SNLVSNIARRLFHL--NATTGLITIKEPLDREETP---NHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVN--PVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCF------------TDHEI--PFRLRPVFSNQ--FLLENAAYLDYESTKEYAIKLLAAD------AGKPP--LNQSAMLFIKVKDENDNAPVFTQS---FVTV-SIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK-DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKANDLGQPDSLFSVVIVNL 791
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813])

HSP 1 Score: 218.009 bits (554), Expect = 3.374e-57
Identity = 233/814 (28.62%), Postives = 377/814 (46.31%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDGR--YNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPP---PQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPTPKSSAVSVQI 3296
            I  VL+V  +   G +  ++   EE+  N LIG+L   L+  ++    L+      + +KT D  L+               IDRE++C+   ++  C   + +     +    + +   + DINDN P F    I   + EN+ A  S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F++   E +I EN PV   V ++ ATDAD  EN K+++ F   SN    +A   F +   +  G I +K+ LD + TP       +V A D G  P  +R  V + + DVND  P I + YI N    +++  + EN  +N  IA ++V DKD+   G V C+             D E    +R+     +Q  ++++N    D E       K++  D        + P  L   A + + + DENDN P + +S   F +  + P N+   ++L  +  +D D G       ++ P    E +    +G L +V   DRE  +     I A   +G       V++ V I+D+ND +PVF+ + Y+F   EN      VG +  TD D      +   I   +  F+I+S++G+IR     DRE++E Y   + A D         R+ +  V++ V+D+NDN P    PP     +LV+  +N   G  VF + A D D   N  V Y I+     +LF+ID ++GN+ ++ K  +++  L   H VLV A+D G P    S V V +
Sbjct:   30 IFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS-AINSKYTLPAAVDPDVGINGVQNYELIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSF---SNLVSNIARRLFHL--NATTGLITIKEPLDREETP---NHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVN--PVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCF------------TDHEI--PFRLRPVFSNQ--FLLENAAYLDYESTKEYAIKLLAAD------AGKPP--LNQSAMLFIKVKDENDNAPVFTQS---FVTV-SIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK-DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKANDLGQPDSLFSVVIVNL 791
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813])

HSP 1 Score: 217.624 bits (553), Expect = 4.292e-57
Identity = 233/814 (28.62%), Postives = 378/814 (46.44%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPP---PQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPTPKSSAVSVQI 3296
            I  VL+V  +   G +  ++   EE+  N LIG+L   L+  ++    L+      + +KT D  L+               IDRE++C+   ++  C   + +     +    + +   + DINDN P F    I   + EN+ A  S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F++   E +I EN PV   V ++ ATDAD  EN K+++ F   SN    +A   F +   +  G I +K+ LD + TP       +V A D G  P  +R  V + + DVND  P I + YI N    +++  + EN  +N  IA ++V DKD+   G V C+             D E    +R+     +Q  ++++N    D E       K++  D        + P  L   A + + + DENDN P + +S   F +  + P N+   ++L  +  +D D G       ++ P    E +    +G L +V   DRE  +     I A   +G       V++ V I+D+ND +PVF+ + Y+F   EN      VG +  TD D      +   I   +  F+I+S++G+IR     DRE++E Y   + A D         R+ +  V++ V+D+NDN P    PP     +LV+  +N   G  VF + A D D   N  V Y I+  +  +LF+ID ++GN+ ++ K  +++  L   H VLV A+D G P    S V V +
Sbjct:   41 IFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS-AINSKYTLPAAVDPDVGINGVQNYELIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSF---SNLVSNIARRLFHL--NATTGLITIKEPLDREETP---NHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVN--PVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCF------------TDHEI--PFRLRPVFSNQ--FLLENAAYLDYESTKEYAIKLLAAD------AGKPP--LNQSAMLFIKVKDENDNAPVFTQS---FVTV-SIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK-DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKANDLGQPDSLFSVVIVNL 802
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813])

HSP 1 Score: 218.779 bits (556), Expect = 5.947e-57
Identity = 233/814 (28.62%), Postives = 377/814 (46.31%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPP---PQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPTPKSSAVSVQI 3296
            I  VL+V  +   G +  ++   EE+  N LIG+L   L+  ++    L+      + +KT D  L+               IDRE++C+   ++  C   + +     +    + +   + DINDN P F    I   + EN+ A  S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F++   E +I EN PV   V ++ ATDAD  EN K+++ F   SN    +A   F +   +  G I +K+ LD + TP       +V A D G  P  +R  V + + DVND  P I + YI N    +++  + EN  +N  IA ++V DKD+   G V C+             D E    +R+     +Q  ++++N    D E       K++  D        + P  L   A + + + DENDN P + +S   F +  + P N+   ++L  +  +D D G       ++ P    E +    +G L +V   DRE  +     I A   +G       V++ V I+D+ND +PVF+ + Y+F   EN      VG +  TD D      +   I   +  F+I+S++G+IR     DRE++E Y   + A D         R+ +  V++ V+D+NDN P    PP     +LV+  +N   G  VF + A D D   N  V Y I+     +LF+ID ++GN+ ++ K  +++  L   H VLV A+D G P    S V V +
Sbjct:   41 IFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS-AINSKYTLPAAVDPDVGINGVQNYELIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSF---SNLVSNIARRLFHL--NATTGLITIKEPLDREETP---NHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP--VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCF------------TDHEI--PFRLRPVFSNQ--FLLENAAYLDYESTKEYAIKLLAAD------AGKPP--LNQSAMLFIKVKDENDNAPVFTQS---FVTV-SIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK-DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKANDLGQPDSLFSVVIVNL 802
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4])

HSP 1 Score: 172.555 bits (436), Expect = 7.192e-43
Identity = 203/794 (25.57%), Postives = 336/794 (42.32%), Query Frame = 3 
Query: 1008 SLIGDLKP-YLSSEMLQTLRLSNMNFKTSDYFLL--HSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVN--DINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQE-NKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDRE-AMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTF-VGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKD----GFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDY 3347
            ++I  +K  + SS+ L    ++  + ++ + F L   S  +++ +S+DRE +       +  IL+ +  Y R       S ++ V+  D+ DN+P F +      + E+A    + L ++ A D D  ENG I Y L E N   + +   +  +     P       LD E      ++++A D G P++  T  ++I V D NDN P+F    Y  TI+ENI +   +  + ATD D   NGKV+Y  A  S           G+  +   G++ +++++D   +P       ++ A D       S   +TI +ID+ND  P +            +  T+ EN +I   +  V  +D+DSGP GI++  +      +I                   D+   +IK  K  DRE       K+  +D             L     I V++ D NDN P + K  Y     E  PR  +    +  L+  D D   +  +++     + F + + G+   +LS   E   + + VR+  S +D G       +NV I D N  AP F+   +     E+S   + V  ++A D D      I Y I   S  F I+  SG I V++ LDRE++  +++ + A D+A+            +     D+NDN P  +F        I  + P+G     + A D D+  NG V Y + +        LF +D  SG L +  K  L   Q     L + A D G  TP  SA S +I L     S+ ++N P +
Sbjct:  182 TIIASVKASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVL-------DKHILK-VTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVF-ARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAP-------LDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSS--------GIGGLTIDYSTGEVTLRERIDAKNSP----ITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIA--------AQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFII-------------------DEDSGLIKTTKLLDRETTARYSLKVTARD--------MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQ----IITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSID-SSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILD----DINDNSP--QFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSK--LDREQFAVIVLPIFARDRG--TPSLSAAS-EITLTL---SDVNDNAPTF 892

HSP 2 Score: 97.8265 bits (242), Expect = 5.194e-20
Identity = 138/541 (25.51%), Postives = 235/541 (43.44%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFS------QFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINR--FDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMI---NPSQAFELTESGE------LFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPV---FSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEY 2795
            ++++ + DINDN P F++ E  +V +     R S +   +A D D  E+  ITY+++E    +FS      Q   L +S        +L   D++VR    +E+ A D G  Q    + + I   D+ ++ P F    +   I E+ P+   VI + A D D  +N ++ Y     S +  Q    +F I  +   G I V   LD     R +R  F  +V+A D+ + P  + T + + + D+ND  P  T +          ++TI E+  +      VS +D D GP GIV+ Y  N++       +   S+ L+R++  S   ++       + DRE+     F +I    P   R+   P  L+  +EI + + D NDN P + +  Y+    EN P        +G +   D D G+       I     ++ F++ E  E      +     FD EA ++N        S G+ + TV + + + D ND  P    F +   RF+ V+   +  +G + A D D +    +EY
Sbjct:  566 TIAVVLKDINDNAPTFDKKEY-NVTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAILSVSG-------ELKRQDHKVR----VEISATDQGGLQGRCVVNVFI---DDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVY-----SIDSSQ----FFRI--DPSSGDISVSSDLD-----REDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSS--------SYAATISEDIPVGTSFLQVSAIDADIGPNGIVD-YFLNES-------SSSPSIQLFRLDRTSGTLRVS-----SKLDREQ-----FAVIVL--PIFARDRGTP-SLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGS----TVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEA-KANKFFFELQASSGQLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQ--MARQIGFIPAFDPDQN--ATLEY 1035
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4])

HSP 1 Score: 141.739 bits (356), Expect = 1.911e-33
Identity = 157/599 (26.21%), Postives = 249/599 (41.57%), Query Frame = 3 
Query: 1575 IKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDRE-AMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTF-VGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKD----GFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDY 3347
            ++I V D NDN P+F    Y  TI+ENI +   +  + ATD D   NGKV+Y  A  S           G+  +   G++ +++++D   +P       ++ A D       S   +TI +ID+ND  P +            +  T+ EN +I   +  V  +D+DSGP GI++  +      +I                   D+   +IK  K  DRE       K+  +D             L     I V++ D NDN P + K  Y     E  PR  +    +  L+  D D   +  +++     + F + + G+   +LS   E   + + VR+  S +D G       +NV I D N  AP F+   +     E+S   + V  ++A D D      I Y I   S  F I+  SG I V++ LDRE++  +++ + A D+A+            +     D+NDN P  +F        I  + P+G     + A D D+  NG V Y + +        LF +D  SG L +  K  L   Q     L + A D G  TP  SA S +I L     S+ ++N P +
Sbjct:    2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSS--------GIGGLTIDYSTGEVTLRERIDAKNSP----ITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIA--------AQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFII-------------------DEDSGLIKTTKLLDRETTARYSLKVTARD--------MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQ----IITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSID-SSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILD----DINDNSP--QFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSK--LDREQFAVIVLPIFARDRG--TPSLSAAS-EITLTL---SDVNDNAPTF 533

HSP 2 Score: 107.842 bits (268), Expect = 3.716e-23
Identity = 172/657 (26.18%), Postives = 276/657 (42.01%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLG-----NRFYHKLMINPS-QAFELTE-SGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSIN---SKSGMIRVTTK--LDREEKE---FYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDS---NWPIGHKVFTMEAFDPDLKENGSVSY 3122
            S + ++I V DIND+ P     + + + +E   A   ++    A D D   NG I Y ++ ++DFI  +   L         +    LLD E    Y +++ A D G P    +  I + ++D NDN P F+K  Y  TI E +P   ++I + A D D D+  K+ YR        ++     F I+    +G I     +  +L  + ++    +SA D G      R  V + I DVN      +  Y  ++     S  IPE+S   Y +  +   D D G            N  ++  I   +S   +R++  S D     I    + DRE  D   F +I      +  ++     L    +I V++DD NDN P++  S Y     E+ P      V    L+VS  D D+G     + F ++   +PS Q F L   SG L +    DRE      + IFA        +    I + + D ND AP F   +Y     ENS   + VG + A D D      I ++I     + LF I     ++G++R+ T+   D E K    F+ +Q            G+ + T  V + V D+NDN P +K       V++ +   N  +  ++  + AFDPD  +N ++ Y
Sbjct:  102 STVPLTINVIDINDHAPTLIAAQ-KMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGL---------IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQ--KITYRI-------EEADREVFSILDIGDQGAIL---SVSGELKRQDHKVRVEISATDQGGLQ--GRCVVNVFIDDVN------SAPYFNDHPF---SVKIPEHSPIGYPVITLKAEDHDRG-----------DNARIVYSI---DSSQFFRIDPSSGD-----ISVSSDLDRE--DRATFSVI------VTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIP------VGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQ---------ASSGQLSSTVPVRIHVSDVNDNKPALK-----DFVILMNRFDNVQMARQIGFIPAFDPD--QNATLEY 676

HSP 3 Score: 103.605 bits (257), Expect = 7.022e-22
Identity = 167/659 (25.34%), Postives = 258/659 (39.15%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENK-------DFIFSQF-FRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDH-IKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT-ESGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKI--SLPSP---LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSID 3161
            V ITV D+NDN P F        ++EN     + +   +A D D   NG + Y +  +        D+   +   R +I   N P                   + A D   P  + T+ + I V D ND+ P    A    T+ EN+ + E+V  + A D DS  NG + Y      +            + +   G I   + LD + T    R+   V+A D G     + TT+ + + D+ND  P     +     +   S  +P  S    I  +  VD D            +Q         D+E  ++  + D     Q  I+    E  R+  DH ++ +I   D   LQ              + V IDD N + P +   P+  K  E+ P        +  L+  D D G+       I+ SQ F +   SG++ +    DRE   +  V + AS  +    N +  I V + D ND +P F+  +Y     E+    T    V A D D    G ++Y +  S  SP   LF ++  SG +RV++KLDRE+     + I A D            T T+S    D+NDN P   F      + I  N P+G  V T+ A D D  +N  +S++I       LF I+
Sbjct:    2 VEITVVDVNDNAPVFASDSYNVTILENITIP-AVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSP---------------ITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED-----------FIIDEDSGLIKTTKLLDRETTA---RYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAP----TFDKKEYNVTISEEMPRGS---QIITLKAVDNDE-----------DQKITYRIEEADREVFSILDIGD-----QGAILSVSGELKRQ--DHKVRVEISATDQGGLQ----------GRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIG----YPVITLKAEDHDRGDNARIVYSIDSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLS----DVNDNAP--TFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIE 584
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0])

HSP 1 Score: 119.783 bits (299), Expect = 9.739e-27
Identity = 157/614 (25.57%), Postives = 273/614 (44.46%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGI--VTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECY--LTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL---GNRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
             D+E +K Y   ++A +  +  +T T  I IR++D NDN P+F    Y  T+ E    +E ++ + A+D DS   G+V+Y     S++        F I  VT    G+++ ++ L         RF  +VSA D G     +   + I +I                    D+ +  P+ S + Y    +   +D  PG  +     ++   + +  G  D      + +++ +   +IY+ + +   D + +D +   I       L     N  Q      +V+ I+D NDNPP++  S  E    E+   ++       +++ SDKD    G   Y  +  +P  + E+ + +G+L      D EA  +  +R+ A+ +     +  +++ + +LD ND AP F    Y    +ENS   T VG V A D+DS   G I Y+I+  S  F I+ K G +     +DRE      I I+A D         R+ T +  ++VLD+NDN P      P   +V+ +  P+   + T+ A DPD   NGSV Y+      +LF + S +G++++  +  L+ +      L ++ SD G+P  KS    V +R+
Sbjct:  601 FDFEKQKSYQTTVIATNANS--ETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSS--------FSINPVT----GEVFAQKPL------ARGRFHLVVSAKDGGGQSSENSANIHITVI--------------------DKDTKTPQFSRSKYEIRTT---EDILPGIAIGSVGAMSKVKYSIYSGDQDHN----FSIDEDT--GKIYVTRYL---DADVHDTVLLNI----QATLPSGESNQTQ------VVIFIEDHNDNPPQFSSSLVEISIREDLKLHE----PFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKG----VPPRSSTASARISVLDVNDNPPSCLSITP---IVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQS-SLFVVKS-NGDVYL--RRQLNASDERHQRLSVIVSDQGVPR-KSVVCHVPVRI 1136

HSP 2 Score: 111.694 bits (278), Expect = 2.809e-24
Identity = 90/288 (31.25%), Postives = 138/288 (47.92%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDN-VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRP-IITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIV 2093
            V I + D NDN P+F+   +E  + E+        Y+ +A D D+++NG + Y        I S      I  D    +L    LLDYE  + Y + + A D G P ++  + + I V D NDN P FEK+ Y   ++EN P K  V ++VA D DS ENG++ YR    +N  +     YFGI  +   G +Y K+ +D ++   I+  D  + A D G  PR S  +  I ++DVND  P  +++  I           +P  S ++  I  +  +D D G  G V
Sbjct:  823 VVIFIEDHNDNPPQFSSSLVEISIREDLKLH-EPFYVVQASDKDKKKNGEVRYS-------IISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRI---TNGSE-----YFGI--DEKLGNVYTKRSIDREV---ISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITPI----------VVPAGSPLSTAIGTIVAMDPDKGLNGSV 1079

HSP 3 Score: 110.923 bits (276), Expect = 5.519e-24
Identity = 170/711 (23.91%), Postives = 290/711 (40.79%), Query Frame = 3 
Query: 1233 ISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRL--------MQLFL-----LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNY---RFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYI--TNNGHGDESSTIPENSINNYIAAVSVVD--KDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDRE--ENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQI----LDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSA 3281
            I + + V+D NDN P F    ++  + E A    S   L    D D                F   +F  LQ + +NV +L        +Q  L     LD E R  Y + + A D G P K G L+  I + D NDN P+F ++ Y  ++  NI +   +I + ATDAD  EN +++Y   + + PSN+    A +  G++T +              L P  +  D +V A D+G+    S   VTI ++      P + + ++  +N+ H  E+ST     + + +A VS+    +D+    I    L  Q                     ++    +Y++      DRE     H+KF ++ KD            Q+  E   ++ I D NDN P++  S        NR +   +      L   D DLG   + +  +  ++   +  E+G +F+  + D         R+ A   DG  +  +S ++Q+    LD     P F    ++    E++   T +  V A +        I Y +       ++++ SG + +    D E+++ Y   ++A  NAN                  D+NDN+P I +P    L V +   P    +  + A D D    G VSY I+ +  + FSI+  +G +F   +  L+  +    HLV+ A D G  + ++SA
Sbjct:  106 IDILVEVDDENDNAPSFADQVVKLEISEFAQLGTS-FALPTVTDGD-------------GPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNS--NFAISQSGVITTTAS------------LLPA-STHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENST-----LGSIVARVSIAQQYRDTKLRLIGSSALCPQ---------------------QTDQAHVYLLLLCGILDRETASEHHLKF-LLEKDG-----------QIIIEHPQLLTIGDINDNAPQWHSSQIHISL--NRTQGGSR-----TLTAKDPDLGQNGWIRYSVLDTELVSIDKETGRIFVPNTIDCNIGSEIKFRVRA--EDGG-SPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIAT-NANSETSTSLISIRLK-----DVNDNWP-IFYPNEYHLTVREGPKP-EEPLLVVSASDMDSGTFGEVSYHILSESSS-FSINPVTGEVF--AQKPLARGRF---HLVVSAKDGGGQSSENSA 725

HSP 4 Score: 74.3294 bits (181), Expect = 6.656e-13
Identity = 169/736 (22.96%), Postives = 299/736 (40.62%), Query Frame = 3 
Query: 1185 ILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD-LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQ--KTGTLKIKIRVQDENDNLPL-FEKALYEETIMENIPVKEKVIEI---VATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDR--EENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT-ESGELFL-VLSFDREAMESNPVRIFASVSDGRYNQTVSINVQIL---DENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLP--SPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK-DGFNLFSIDSKSGNLFIVVKHSLSENQL-----TSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPS 3320
            +L +IL  G S+  S  +V +TV D NDN P+ +      + +  + +R+ D L+ + A D D  +NG  +++L E+             S D VP    L L      + + ++L  VD G P       L+I  R        PL F K  Y  TI E +P  + + ++   +A    S   G ++  F++ S                  +G I    +LD ++   + R+   V    +G       T V +R+ ++ND  P   ++         +   +PEN  + +Y+A V   D                       +++   L  + V+D S     +   NI +F         + F+++ +    ++  + +    TN   + + + D NDN P + K  Y+       P           +E  D D      + L    S  F +  ESG LF+ VL     A E   V + A+  +G  + + S+ V ++    E    P F    +RF  +ENS     +G++   +          Y+I  P  S +FSI+ K G + V   +DRE++  +  Q+  IDN        +       V VLD NDN P   F      + +  +   G K+  + A D D  ENG VSY+I+  +  N+ +++  +G++ +   +  ++ QL      +  +++ A D+G P  +++   VQ+ L   + S
Sbjct: 1696 LLIIILTDGGSRNDS-CTVRVTVADQNDNKPQLDASTPSELEIAES-SRVGDVLHRFRASDMDIGQNGKFSFELLEDSSG----------SLDLVPETGDLVLRRLSSLQSWKIKLRVVDHGVPGLYVEKNLEISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAKLQPELAGLTYSIVEGNIDSAFSVDS------------------EGVIRTNLELDREI---LERYSLKVIGTGSGQQ---IGTRVDVRVNNLNDNVPSFPMS---------KPRRVPENLRVGSYVATVGAKD-----------------------VDNLAPLRYFLVSDSSGQTPTHF--NIDQFTGTIHLTAPLDFEVLPEHTLTIKATDGSFDTFTN---LTIFVSDINDNAPTFSKPLYQTTV---SPATFSPGQPFAKIEAHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLP---PAGERYLVTVTAT-DNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSGEESRE-----FHYRIQDPEASKIFSID-KFGRLFVAGPIDREQRATHEFQV-EIDN---EMMTSQKVQCKCHVIVLDENDNLPV--FTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQL---NEWNDAQLDEFPNATWQILVEARDHGHPA-RAAVGKVQVSLKMSSWS 2335

HSP 5 Score: 64.6994 bits (156), Expect = 6.016e-10
Identity = 92/395 (23.29%), Postives = 156/395 (39.49%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIE---------HVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLA-VDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQ----DQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYL 2378
            + ITV D +  TP+F++ + E          + + +  A     Y   + D D        + + E+   I+   +                 LD +V    ++ + A +  G   +T   ++ I ++D NDN P F  +L E +I E++ + E    + A+D D  +NG+V Y   + S+    +  + F        G++     LD + T     +   V A D G  PR S  T+ I ++DVND  P    ++ T          + ENS     +  V   DKDS   G +                      +YR+ + S+    D+++  +   +  DRE   H+   I+ +D     R++      T  A I VL  D NDNPP  L
Sbjct:  727 IHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAMSKVKYSIYSGDQDHN------FSIDEDTGKIYVTRY-----------------LDADVHDTVLLNIQATLPSGESNQT---QVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSI-ISSHPGSSIEIDQF-------TGQLSTGSLLDYEAT---RNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTME--------VLENSPPKTIVGKVVARDKDSLENGQI----------------------VYRITNGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSS------TASARISVL--DVNDNPPSCL 1046

HSP 6 Score: 52.373 bits (124), Expect = 3.607e-6
Identity = 65/232 (28.02%), Postives = 108/232 (46.55%), Query Frame = 3 
Query: 2628 NQTVSINVQILDENDLAPVFSLDTYRFNCVE-NSFSTFVGHVEATDQDS---DIY------GPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF---NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
             +T+ I V++ DEND AP F+    +    E     T       TD D    D++      G +     L S   +   ++ ++ V  +LDRE ++ Y + I A D     + G+   +  +    +D NDN P   F   +    + +N  IG  + T++A D D+ EN  +SY I K      + F+I S+SG    V+  + S    ++  +++VASD+G P+  SSAV
Sbjct:  103 GETIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLV-VNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEI----IDANDNAPV--FSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAI-SQSG----VITTTASLLPASTHDVIVVASDHGSPSLSSSAV 322
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4])

HSP 1 Score: 110.153 bits (274), Expect = 9.648e-24
Identity = 146/591 (24.70%), Postives = 245/591 (41.46%), Query Frame = 3 
Query: 1233 ISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQEN----------GTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIME-NIPVKEKVIEIVATDADSDE-NGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPII---TVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLN---LYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKL-------MINPSQAFELTESGELFLVLSFDRE-AMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEY-KISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNAN 2924
            + V I +ND+NDN P F + +    V E +     D+   +A D D+  N          G I + ++ +   IF +       P           LD+E    Y + L+A D    +   T  + I ++D NDN P FE+  Y  T++E ++ + + +  + ATDAD DE + ++ YR       + Q A   F I   SG   I + + LD D    +  ++F+V A D+  +       V + + D+ND  PI       YI  N         P +S   Y   V   D D           T +N  +  GI   + +N   ++R+     DQ    I  ++  DRE +   +F I       ++ N++        A + + + D NDN P + K+ YE    E  P      +     +  ++   N F ++L        +   +  + +  G L +    D E   + +   +   VSDGR++   +++V ++D ND AP     T      +    T +G   ATD+D+         + S P   F+I+ + G +RV   LDRE+   Y + I A DN+N
Sbjct: 1319 VKVQIVINDVNDNAPSFEEQKYIGRVKE-SEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVK------EP-----------LDFEASDQYHLVLIASDG---RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRL------EGQGADEVFRIGKYSGT--IELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENRE-------PIHSDGVYFMDVQARDFDD---------PTTENANIEYGIVRNKLINGESVFRI-----DQNTGKIFAMRSLDREISSEREFII------EVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIG-AAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTID-QDGTLRVAHTLDREDIAVYNLIIEAYDNSN 1851

HSP 2 Score: 98.5969 bits (244), Expect = 2.915e-20
Identity = 181/746 (24.26%), Postives = 320/746 (42.90%), Query Frame = 3 
Query: 1212 RSKKP--SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQ-------ENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLFEKALYEE---TIMENIPVKEKVIEIVATDADSDENGKVNYRFAL---PSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN---SINNYIAAVSVVDKDS-GPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDN-----PNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL---GNRFYHKLMINPSQ-AFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFST--FVGHVEATDQDSDIYGP-IEYKISLPSP--LFSINSKSGMIRVTTKLDREEKEF---YAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPI-GHKVFTMEA----FDPDLKENGSVSYKIIK----DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV---ASDNGIPTPKSSA-VSVQI 3296
            R  +P   F   S+ V DINDN+P+F +P  E  V        S + ++ A D D   N  ITY L+       E+++ +   FF L         L++   +  + +KF +  ++A D+G P+    + ++ + V D+    P ++ +   +   T+ EN+ + + ++   A  +    N  V Y+      P N  +     +      +   ++ + + LD +   ++N +   ++A D   S   S  T  + + DVND  P  TV+  T  G  DE  T  E+   +    I  V  +D DS GP         N+    I G  + E    +R+++ + +    I  N K FDRE+ D     +   D      P     N++ ++      + ++I+D NDN P + +  Y  +  E+     +      ++ +   DL    N  YH +     +  F + T+SG +F+    D EA +   + + AS  DGR+N T ++ + I D ND AP F    Y    +E        + +V ATD D D     I Y++       +F I   SG I +   LDR+       +   + AID+      G       V     D+NDN P   FP      + ++  PI    V+ M+     FD    EN ++ Y I++    +G ++F ID  +G +F +   SL + +++S    ++   A+D G+P+ +  A V++++
Sbjct:  954 RGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVF-AFDNDAAHNAEITYSLEIDTTAGEEHQNDL--DFFELVNRRSGEITLIKPIPM--KTQKF-IFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYE---QVNNYTLTLTATDM-TSRVASTKTFVVEVRDVNDVVPQFTVDLFT--GTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGP--------QNEVHYRIVGEANGEETKHFRIDELTGE----IFPNEK-FDREKIDMYILTVEASDRSVSALPGANGPNKDNVK------VQIVINDVNDNAPSFEEQKYIGRVKESEGEGHD------VITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIAS--DGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVR----DINDNSP--IFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAM--RSL-DREISSEREFIIEVRANDRGVPSREGFANVTIKV 1651

HSP 3 Score: 86.2705 bits (212), Expect = 1.811e-16
Identity = 128/526 (24.33%), Postives = 206/526 (39.16%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKFNQPEIEHVV-----VENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEV--RKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKV-NYRFALPSNNQQQLACNYFGIVT-----ESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-----SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYII------KNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEV--SDKDLGNRFYHKLMINPSQAFELTE-----------SGELFLVLS----FDREA-MESNPVRIFASVSD--GRYNQTVSINVQILDEND 2672
             +  V + V DINDN+P F +    ++      + +      D+   + +DP   EN  I Y +  NK       FR+     N  ++  +  LD E+   + +++E+ A D G P + G   + I+V D NDN P FEK  YE ++ E  P+   V+   A DAD +    V  Y+ +  S        +YF + T     +S  G + VKQ LD +   + + F   +   D  +    +   V + ++D ND  P I         HG     + E+     SI  Y A     D+D+G                            +R+N +S  ++ + I      +     DRE+       I   DN N                + V + D NDN PE    P      EN P N     +LG  E+  +D+D    F     +  S +F+ ++            G   + ++    FDREA +    + I   ++D  GR N+  S++V I D ND
Sbjct: 1528 GYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDP-TTENANIEYGIVRNKLINGESVFRID---QNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEES--------DYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHD---AEAAVHVALVDRNDHAPHI---------HGATEHRVREDVPRGTSIGRYTA----TDRDAG------------------------DTARFRINRQSDPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYDNSN----------NIGRQMVAVYLQDVNDNGPEPYTVPRPCIFRENTPVN-----QLGTCEIRATDRDTA-EFGPPFTMEVSPSFKYSQYLNVIFNANGDGGNGSMTITPLQEFDREAPVPGKILEIPLILADRAGRRNE-ASVHVIIGDLND 1984

HSP 4 Score: 70.8626 bits (172), Expect = 7.641e-12
Identity = 156/705 (22.13%), Postives = 279/705 (39.57%), Query Frame = 3 
Query: 1368 DRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYR-----FALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDID-LTPRINRFDFMVSACDNGNSPRCSRTT-VTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIK---NIKEFDREENDH-IKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEY---LKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL---GNRFYHKLMINPSQAFELTESGELFLV------------LSFDREAMESNPVRIFASVSDGR-YNQTVSINVQILDENDLAPVFSLDTY-----RFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFS-----------INSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQK-LVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG------------FNLFSIDSKSGNLF--IVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIR 3299
            D +  G ITY L+ +     +++FR+  S   +     L   D  + K + +++ A +D    +   + + IR+ D NDN+P F + LY   + E+IP+ + ++++ A D D+ +N ++ Y      F++ SN                  G+I  K +LD D L  R   + F V+A D+G     S +  + IR  + N                 DES+     S   Y A V+   +   P   ++    +++ E+     DK   +  ++N  S D+   ++K    +   D  E ++ I   +I +D+ +           T+ A +++ I+D N+N PE+    K     K  E   + D   +    +E +D D    G+  Y       S  +  +ES + F++            + FDRE      V + A+    R        +V+++D ND +P F   +Y     RF  V  S  T    V A D D+     I Y + + +               +N +SG I +   +  + ++F    ++A DN           +  V++ VLD     PK +  P  K  + +D N  +   +    A       N  V YK+   G            FN F    ++GN +  +V+   L   Q+ +  L L A+D       +    V++R
Sbjct:  562 DGRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTARED---NRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHNFSINSN------------------GEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTN-----------------DESAVFLPTS--QYTAFVAEDAQGGTPVIQIQARDADRD-EVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSK--THTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVK--VEATDDDSSANGDIVY-------SLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVIT----VFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFI-FNVIADDNG---IPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKF----ENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVASTKTFVVEVR 1202

HSP 5 Score: 61.2326 bits (147), Expect = 7.190e-9
Identity = 76/318 (23.90%), Postives = 129/318 (40.57%), Query Frame = 3 
Query: 1107 HSSYLKVKRSIDREEVCSKSSKNNDCIL----RLILVYGRSKKPSFISVSITVNDINDNTPKF----NQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL-----QENKDFIFS-QFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFAL--PSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRC--SRTTVTIRIIDVN----------DFRPIITVN 1976
            H+  +K++  +   ++    +  N  ++        VY      S+ ++ I + D+N+N P+F       +I  ++          +   EA D D   NG I Y L     +  K F+   Q   L  SP  V         D E R    + + A D G+    G  +  + V D NDN P FE+  YE ++     V   VI + A D D+  N ++ Y   +   +  + Q   ++F +V     G+I + + + +    +  +F F V A DNG  P    S   VT+ ++D            D +P ITV+
Sbjct:  803 HTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVV--------FDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRR-SGEITLIKPIPM----KTQKFIFNVIADDNG-IPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVD 1106

HSP 6 Score: 59.3066 bits (142), Expect = 2.337e-8
Identity = 97/418 (23.21%), Postives = 168/418 (40.19%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFR-LQISPDNVPRLMQLFLLDYE--VRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIP------ENSINNYIAAVSV--VDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREE---NDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENR 2414
            G   +  F +V+I V D+NDN P F +   E  V E A   A +     ++A+  +  ++   TY+L E  D+ +    +  + S   V R+ Q   LDYE   ++      + V DG  +      + + + D ND+ P    A  E  + E++P    +    ATD D+ +  +  +R    S+ ++Q   +          G + V   LD +    I  ++ ++ A DN N+    R  V + + DVND              +G E  T+P      EN+  N +    +   D+D+   G       + +F+  Q +N      ++  N    +  + I   ++EFDRE       ++  +I  D    +          NEA + V+I D NDN     +      SY  R
Sbjct: 1637 GVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDAD--EEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQ--PLDYEDVTQRDGFHLGIRVSDG--RHDAEAAVHVALVDRNDHAPHIHGAT-EHRVREDVPRGTSIGRYTATDRDAGDTAR--FRINRQSDPKRQFTIDQ--------DGTLRVAHTLDRE---DIAVYNLIIEAYDNSNN--IGRQMVAVYLQDVND--------------NGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRDTAEFGPPFTMEVSPSFKYSQYLN-----VIFNANGDGGNGSMTITP-LQEFDREAPVPGKILEIPLILADRAGRR----------NEASVHVIIGDLNDNTMHDGRMTIHVNSYLGR 2002

HSP 7 Score: 55.4546 bits (132), Expect = 3.343e-7
Identity = 133/607 (21.91%), Postives = 241/607 (39.70%), Query Frame = 3 
Query: 1611 PLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVN--YRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDID--LTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQG--INDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHK--LMINPSQAFELTESGELFLV---LSFDREAMESNPVRIFASVSDG---------RYNQTVSINVQILDENDLAPVFSLDTYRFN----CVENSFST---FVGHVEATDQDSDIYGPIEYKI----SLPSPLFSINSKSGMIRVTTKL--DREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG---------FNLFS-IDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            P F K  YE T+ E+  V   V+++ A    S E+G+      ++L  +  +     +F I  +   G I++ + LD D    P++++   + +  DN    R S   +TIRI DVND  P  T    T     D    IP   +N  I  V+ VDKD+G    +   + N NF +     I+ K  L+  ++N++     +Y                +F +  +D+         P+ L++ A I +  ++ ND    +L +           +     +++   +    ++   F  K          F + E   L  +   +S    A   NP+ +   V D           +    ++ + I D N+  P F  D  +++     +E ++ T    +  VEATD DS   G I Y +    S     F I+ ++G++  +  +  DRE +    + + A D  +    G    +  V    +D+NDN P+  F  P     +     +G  V T+ AFD D   N  ++Y +  D           + F  ++ +SG + ++    +   +       ++A DNGIP    S+  V + +
Sbjct:  528 PQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRSFEDGRSKGPITYSLEGDTPED-ETKWFRI--DPSTGIIHLTRLLDFDDPALPKLHKLK-VTAREDN----RESHVDLTIRIDDVNDNVPTFTRPLYTAQVRED----IP---LNQTILKVTAVDKDTGDNSRITYSVDNHNFSINSNGEISAKVRLDADQLNER---HFVY----------------RFNVTARDH-------GEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFP-DCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEV----VDINDNSPQ--FERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFI---FNVIADDNGIPEALQSSAQVTLNV 1083

HSP 8 Score: 52.373 bits (124), Expect = 2.933e-6
Identity = 70/256 (27.34%), Postives = 109/256 (42.58%), Query Frame = 3 
Query: 1221 KPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKF-YMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLF-EKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNS------PRCSRTTVTIRIIDVNDFRP 1961
            + S + ++I ++D+NDN P F +P     V E+     + L +  A D D  +N  ITY + +N +F  +       S   +   ++L       R F Y   + A D G P   + +  I IR ++ ND   +F   + Y   + E+      VI+I A DAD DE   V Y F +  N +     N F I   +G  K+        DL    N  +  V   D+G+          S  T+ I I DVN+ +P
Sbjct:  622 RESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKV-TAVDKDTGDNSRITYSV-DNHNFSIN-------SNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDE---VTYSF-MDKNGRSTQKMNLFSIDEHTGLVKLRHGVSA-ADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKP 863
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4])

HSP 1 Score: 110.153 bits (274), Expect = 9.648e-24
Identity = 146/591 (24.70%), Postives = 245/591 (41.46%), Query Frame = 3 
Query: 1233 ISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQEN----------GTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIME-NIPVKEKVIEIVATDADSDE-NGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPII---TVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLN---LYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKL-------MINPSQAFELTESGELFLVLSFDRE-AMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEY-KISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNAN 2924
            + V I +ND+NDN P F + +    V E +     D+   +A D D+  N          G I + ++ +   IF +       P           LD+E    Y + L+A D    +   T  + I ++D NDN P FE+  Y  T++E ++ + + +  + ATDAD DE + ++ YR       + Q A   F I   SG   I + + LD D    +  ++F+V A D+  +       V + + D+ND  PI       YI  N         P +S   Y   V   D D           T +N  +  GI   + +N   ++R+     DQ    I  ++  DRE +   +F I       ++ N++        A + + + D NDN P + K+ YE    E  P      +     +  ++   N F ++L        +   +  + +  G L +    D E   + +   +   VSDGR++   +++V ++D ND AP     T      +    T +G   ATD+D+         + S P   F+I+ + G +RV   LDRE+   Y + I A DN+N
Sbjct: 1319 VKVQIVINDVNDNAPSFEEQKYIGRVKE-SEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVK------EP-----------LDFEASDQYHLVLIASDG---RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRL------EGQGADEVFRIGKYSGT--IELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENRE-------PIHSDGVYFMDVQARDFDD---------PTTENANIEYGIVRNKLINGESVFRI-----DQNTGKIFAMRSLDREISSEREFII------EVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIG-AAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTID-QDGTLRVAHTLDREDIAVYNLIIEAYDNSN 1851

HSP 2 Score: 98.5969 bits (244), Expect = 2.915e-20
Identity = 181/746 (24.26%), Postives = 320/746 (42.90%), Query Frame = 3 
Query: 1212 RSKKP--SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQ-------ENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLFEKALYEE---TIMENIPVKEKVIEIVATDADSDENGKVNYRFAL---PSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN---SINNYIAAVSVVDKDS-GPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDN-----PNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL---GNRFYHKLMINPSQ-AFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFST--FVGHVEATDQDSDIYGP-IEYKISLPSP--LFSINSKSGMIRVTTKLDREEKEF---YAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPI-GHKVFTMEA----FDPDLKENGSVSYKIIK----DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV---ASDNGIPTPKSSA-VSVQI 3296
            R  +P   F   S+ V DINDN+P+F +P  E  V        S + ++ A D D   N  ITY L+       E+++ +   FF L         L++   +  + +KF +  ++A D+G P+    + ++ + V D+    P ++ +   +   T+ EN+ + + ++   A  +    N  V Y+      P N  +     +      +   ++ + + LD +   ++N +   ++A D   S   S  T  + + DVND  P  TV+  T  G  DE  T  E+   +    I  V  +D DS GP         N+    I G  + E    +R+++ + +    I  N K FDRE+ D     +   D      P     N++ ++      + ++I+D NDN P + +  Y  +  E+     +      ++ +   DL    N  YH +     +  F + T+SG +F+    D EA +   + + AS  DGR+N T ++ + I D ND AP F    Y    +E        + +V ATD D D     I Y++       +F I   SG I +   LDR+       +   + AID+      G       V     D+NDN P   FP      + ++  PI    V+ M+     FD    EN ++ Y I++    +G ++F ID  +G +F +   SL + +++S    ++   A+D G+P+ +  A V++++
Sbjct:  954 RGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVF-AFDNDAAHNAEITYSLEIDTTAGEEHQNDL--DFFELVNRRSGEITLIKPIPM--KTQKF-IFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYE---QVNNYTLTLTATDM-TSRVASTKTFVVEVRDVNDVVPQFTVDLFT--GTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGP--------QNEVHYRIVGEANGEETKHFRIDELTGE----IFPNEK-FDREKIDMYILTVEASDRSVSALPGANGPNKDNVK------VQIVINDVNDNAPSFEEQKYIGRVKESEGEGHD------VITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIAS--DGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVR----DINDNSP--IFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAM--RSL-DREISSEREFIIEVRANDRGVPSREGFANVTIKV 1651

HSP 3 Score: 86.2705 bits (212), Expect = 1.811e-16
Identity = 128/526 (24.33%), Postives = 206/526 (39.16%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKFNQPEIEHVV-----VENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEV--RKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKV-NYRFALPSNNQQQLACNYFGIVT-----ESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-----SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYII------KNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEV--SDKDLGNRFYHKLMINPSQAFELTE-----------SGELFLVLS----FDREA-MESNPVRIFASVSD--GRYNQTVSINVQILDEND 2672
             +  V + V DINDN+P F +    ++      + +      D+   + +DP   EN  I Y +  NK       FR+     N  ++  +  LD E+   + +++E+ A D G P + G   + I+V D NDN P FEK  YE ++ E  P+   V+   A DAD +    V  Y+ +  S        +YF + T     +S  G + VKQ LD +   + + F   +   D  +    +   V + ++D ND  P I         HG     + E+     SI  Y A     D+D+G                            +R+N +S  ++ + I      +     DRE+       I   DN N                + V + D NDN PE    P      EN P N     +LG  E+  +D+D    F     +  S +F+ ++            G   + ++    FDREA +    + I   ++D  GR N+  S++V I D ND
Sbjct: 1528 GYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDP-TTENANIEYGIVRNKLINGESVFRID---QNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEES--------DYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHD---AEAAVHVALVDRNDHAPHI---------HGATEHRVREDVPRGTSIGRYTA----TDRDAG------------------------DTARFRINRQSDPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYDNSN----------NIGRQMVAVYLQDVNDNGPEPYTVPRPCIFRENTPVN-----QLGTCEIRATDRDTA-EFGPPFTMEVSPSFKYSQYLNVIFNANGDGGNGSMTITPLQEFDREAPVPGKILEIPLILADRAGRRNE-ASVHVIIGDLND 1984

HSP 4 Score: 70.8626 bits (172), Expect = 7.641e-12
Identity = 156/705 (22.13%), Postives = 279/705 (39.57%), Query Frame = 3 
Query: 1368 DRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYR-----FALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDID-LTPRINRFDFMVSACDNGNSPRCSRTT-VTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIK---NIKEFDREENDH-IKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEY---LKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL---GNRFYHKLMINPSQAFELTESGELFLV------------LSFDREAMESNPVRIFASVSDGR-YNQTVSINVQILDENDLAPVFSLDTY-----RFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFS-----------INSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQK-LVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG------------FNLFSIDSKSGNLF--IVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIR 3299
            D +  G ITY L+ +     +++FR+  S   +     L   D  + K + +++ A +D    +   + + IR+ D NDN+P F + LY   + E+IP+ + ++++ A D D+ +N ++ Y      F++ SN                  G+I  K +LD D L  R   + F V+A D+G     S +  + IR  + N                 DES+     S   Y A V+   +   P   ++    +++ E+     DK   +  ++N  S D+   ++K    +   D  E ++ I   +I +D+ +           T+ A +++ I+D N+N PE+    K     K  E   + D   +    +E +D D    G+  Y       S  +  +ES + F++            + FDRE      V + A+    R        +V+++D ND +P F   +Y     RF  V  S  T    V A D D+     I Y + + +               +N +SG I +   +  + ++F    ++A DN           +  V++ VLD     PK +  P  K  + +D N  +   +    A       N  V YK+   G            FN F    ++GN +  +V+   L   Q+ +  L L A+D       +    V++R
Sbjct:  562 DGRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTARED---NRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHNFSINSN------------------GEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTN-----------------DESAVFLPTS--QYTAFVAEDAQGGTPVIQIQARDADRD-EVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSK--THTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVK--VEATDDDSSANGDIVY-------SLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVIT----VFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFI-FNVIADDNG---IPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKF----ENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVASTKTFVVEVR 1202

HSP 5 Score: 61.2326 bits (147), Expect = 7.190e-9
Identity = 76/318 (23.90%), Postives = 129/318 (40.57%), Query Frame = 3 
Query: 1107 HSSYLKVKRSIDREEVCSKSSKNNDCIL----RLILVYGRSKKPSFISVSITVNDINDNTPKF----NQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL-----QENKDFIFS-QFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFAL--PSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRC--SRTTVTIRIIDVN----------DFRPIITVN 1976
            H+  +K++  +   ++    +  N  ++        VY      S+ ++ I + D+N+N P+F       +I  ++          +   EA D D   NG I Y L     +  K F+   Q   L  SP  V         D E R    + + A D G+    G  +  + V D NDN P FE+  YE ++     V   VI + A D D+  N ++ Y   +   +  + Q   ++F +V     G+I + + + +    +  +F F V A DNG  P    S   VT+ ++D            D +P ITV+
Sbjct:  803 HTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVV--------FDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRR-SGEITLIKPIPM----KTQKFIFNVIADDNG-IPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGITVD 1106

HSP 6 Score: 59.3066 bits (142), Expect = 2.337e-8
Identity = 97/418 (23.21%), Postives = 168/418 (40.19%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFR-LQISPDNVPRLMQLFLLDYE--VRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIP------ENSINNYIAAVSV--VDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREE---NDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENR 2414
            G   +  F +V+I V D+NDN P F +   E  V E A   A +     ++A+  +  ++   TY+L E  D+ +    +  + S   V R+ Q   LDYE   ++      + V DG  +      + + + D ND+ P    A  E  + E++P    +    ATD D+ +  +  +R    S+ ++Q   +          G + V   LD +    I  ++ ++ A DN N+    R  V + + DVND              +G E  T+P      EN+  N +    +   D+D+   G       + +F+  Q +N      ++  N    +  + I   ++EFDRE       ++  +I  D    +          NEA + V+I D NDN     +      SY  R
Sbjct: 1637 GVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDAD--EEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQ--PLDYEDVTQRDGFHLGIRVSDG--RHDAEAAVHVALVDRNDHAPHIHGAT-EHRVREDVPRGTSIGRYTATDRDAGDTAR--FRINRQSDPKRQFTIDQ--------DGTLRVAHTLDRE---DIAVYNLIIEAYDNSNN--IGRQMVAVYLQDVND--------------NGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRDTAEFGPPFTMEVSPSFKYSQYLN-----VIFNANGDGGNGSMTITP-LQEFDREAPVPGKILEIPLILADRAGRR----------NEASVHVIIGDLNDNTMHDGRMTIHVNSYLGR 2002

HSP 7 Score: 55.4546 bits (132), Expect = 3.343e-7
Identity = 133/607 (21.91%), Postives = 241/607 (39.70%), Query Frame = 3 
Query: 1611 PLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVN--YRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDID--LTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQG--INDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHK--LMINPSQAFELTESGELFLV---LSFDREAMESNPVRIFASVSDG---------RYNQTVSINVQILDENDLAPVFSLDTYRFN----CVENSFST---FVGHVEATDQDSDIYGPIEYKI----SLPSPLFSINSKSGMIRVTTKL--DREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG---------FNLFS-IDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            P F K  YE T+ E+  V   V+++ A    S E+G+      ++L  +  +     +F I  +   G I++ + LD D    P++++   + +  DN    R S   +TIRI DVND  P  T    T     D    IP   +N  I  V+ VDKD+G    +   + N NF +     I+ K  L+  ++N++     +Y                +F +  +D+         P+ L++ A I +  ++ ND    +L +           +     +++   +    ++   F  K          F + E   L  +   +S    A   NP+ +   V D           +    ++ + I D N+  P F  D  +++     +E ++ T    +  VEATD DS   G I Y +    S     F I+ ++G++  +  +  DRE +    + + A D  +    G    +  V    +D+NDN P+  F  P     +     +G  V T+ AFD D   N  ++Y +  D           + F  ++ +SG + ++    +   +       ++A DNGIP    S+  V + +
Sbjct:  528 PQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRSFEDGRSKGPITYSLEGDTPED-ETKWFRI--DPSTGIIHLTRLLDFDDPALPKLHKLK-VTAREDN----RESHVDLTIRIDDVNDNVPTFTRPLYTAQVRED----IP---LNQTILKVTAVDKDTGDNSRITYSVDNHNFSINSNGEISAKVRLDADQLNER---HFVY----------------RFNVTARDH-------GEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFP-DCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEV----VDINDNSPQ--FERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFI---FNVIADDNGIPEALQSSAQVTLNV 1083

HSP 8 Score: 52.373 bits (124), Expect = 2.933e-6
Identity = 70/256 (27.34%), Postives = 109/256 (42.58%), Query Frame = 3 
Query: 1221 KPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKF-YMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLF-EKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNS------PRCSRTTVTIRIIDVNDFRP 1961
            + S + ++I ++D+NDN P F +P     V E+     + L +  A D D  +N  ITY + +N +F  +       S   +   ++L       R F Y   + A D G P   + +  I IR ++ ND   +F   + Y   + E+      VI+I A DAD DE   V Y F +  N +     N F I   +G  K+        DL    N  +  V   D+G+          S  T+ I I DVN+ +P
Sbjct:  622 RESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKV-TAVDKDTGDNSRITYSV-DNHNFSIN-------SNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDE---VTYSF-MDKNGRSTQKMNLFSIDEHTGLVKLRHGVSA-ADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKP 863
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0339463)

HSP 1 Score: 168.703 bits (426), Expect = 1.833e-41
Identity = 185/717 (25.80%), Postives = 300/717 (41.84%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFI-FSQ-----FFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQ---KTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEK---VIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FELTES---GELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI------SLPSP-LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKI----IKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            ++ + V D ND++P F   + E  + E A    S +    A D D  +N  I Y ++   D    +Q      FR+      +        LD E    Y + + A D  + Q   +T T  ++++V D+NDN P F +  Y   + E+     +   V  I ATDAD   N  + Y   +  N Q Q +        +S  G + + + LD +    +  +  ++ A D G+  R + T + + +ID ND  P    +         + S +    +   I  V   D D G            N E+   I++++      V     D +   ++ IK  DREE     F+++ KD     +        +  + +V+ + D NDN P +    YE    E++P        +  +  +D D  +R ++++    ++  F +T     G + +  S D +  +   + + A+ S GR + T ++++ I D N+ AP+F    Y  +  E++   T V  V ATD D  +   I Y +       L SP  FSIN ++G I     LDRE    Y + + A D  N            V+    D+NDN P  K P  Q  ++ D+   +G  V  + A DPD+  NG + Y +    I+DG   F ID  SG   I     L    +   HL  +A D G P P SS V VQIRL
Sbjct:  449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVG-STVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSS---LDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI-IGGNTQSQFS-------IDSMSGDVSLVKPLDYE---SVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQF-------QESVLENVPVGYNIIRVQAYDSDEG-----------ANAEITYSISERDDNFPLAV-----DPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPK--------SASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPG----TPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGR-SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVT----DVNDNAPAFKSPLYQASILEDA--LVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS--FVIDPTSGT--IRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRL 1103

HSP 2 Score: 148.673 bits (374), Expect = 2.310e-35
Identity = 168/710 (23.66%), Postives = 289/710 (40.70%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRS-KKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD--LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---------ESGELFLVLSFDREAMESNPVRIFASVSDG---RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKIS---LPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGN 3176
            S  +  + S+DRE     S   +  +    L   +S ++ +  SV + V D NDN P+F++      V E+      D  +    A D D+  N  I Y        I     + Q S D++   + L   LDYE  + Y + + A D G+P ++ T ++ + V D NDN P F  + ++E+++EN+PV   +I + A D+D   N ++ Y  +   +N        F +  +   G +   + LD +      RF F V A D G  P+ + ++V I + DVND  P     Y   N   D+    P       +  V+  D D           +  ++E+  G N +    +   N +       +I   +  D ++       +   D+             ++ A + + I D N+  P +  +PY    +E+ P        + ++  +D D+G        +N      L          ++G +      DRE      + + A   DG     + T  + + + D ND AP F    Y+ + +E++   T V  V A+D D  + G I+Y +S   +    F I+  SG IR    LDRE    + +  +A+D  +            +     D+ND+ P   F   +  + +  N P+G  V  + A DPD   N  V Y II  D  N FS+ ++ G+
Sbjct:  527 SGVISTRSSLDRE----TSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA-------IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN--------FPLAVDPRTGWVQTIKPLDRE---EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTP-------VTTVTATDPDED---------SRLHYEITTG-NTRGRFAITSQNGRG------LITIAQSLDYKQEKRFLLTVAATDSGG----------RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVG----TTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTA--KDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLE----DVNDSPP--TFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169

HSP 3 Score: 107.071 bits (266), Expect = 9.528e-23
Identity = 144/617 (23.34%), Postives = 257/617 (41.65%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNN---QQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSP---RCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA---FELT---ESGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKS--GMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL------FSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPT 3266
            LD E+   +   ++A DD  P ++GT  +++ V D ND+ P FE   +E +I E   V   VI + ATD D  +N ++ Y     ++     Q      F I  +S  G I  +  LD + +   + +  +V+A D  ++    R +  +V ++++D ND  P  +    T     D+     +N+    +A +   D D G    +        + +I G    +    + ++  S D     +  +K  D E     +  I  +D  +  R        +N  +++V + D NDN P +  S ++    EN P      V   I+ V   D       ++  + S+    F L     +G +  +   DRE       ++ A    V     + +V I VQ +++ND  P F+   Y  N  E+    T V  V ATD D D     E         F+I S++  G+I +   LD ++++ + + + A D+    +        T      D N+  P  +  P    V  D+  P+G  V  + A D D+  N  ++Y + ++  N       FSI+ ++G    +V ++  + + TS +L+ V A D G P+
Sbjct:  422 LDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRI--DSRSGVISTRSSLDRETS---DSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNT----VAHIRATDADQGNNAAIR-------YAIIGGNTQSQ----FSIDSMSGD-----VSLVKPLDYESVRSYRLVIRAQDGGSPSR--------SNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP------VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND--PAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINIT------DANNFAPIFENAPYSASVFEDA--PVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTG---AIVTNAPLDRETTSGYLLTVTAKDGGNPS 986

HSP 4 Score: 106.686 bits (265), Expect = 1.269e-22
Identity = 130/504 (25.79%), Postives = 212/504 (42.06%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFN 2711
            GRS      +V I + D N+  P F        V E+A    + L +  A D D   N  ITY L E             I+P     ++    LD E    Y++ + A D GNP  + T  ++I V D NDN P F+  LY+ +I+E+  V   VI++ A+D D   NG++ Y  +      + +    F  V +   G I   + LD +    +  F     A D G+ P  S   V IR+ DVND  P    + IT          +PENS + + +  +   D D G   +V       ++ +I G +D  + +L       + Q    +  + E D E     +F+++        R    P  L N+A I +L+ D NDN P  L+   +F+   N  R+     ++G +   D D+ ++ +++++   +       S    LVLS            +  SVSDG       + ++V+++ E+ L   F+  T R N
Sbjct:  876 GRSDT---ATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVV-SATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLS-----DRDIEDGSF--VIDPTSGTIRTNKGLDRE---SVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKIT--------LYVPENSPVGSVVGEIHAHDPDEGVNAVV-------HYSIIGG-DDSNAFSLVTRPGSERAQ----LLTMTELDYESTRK-RFELVV-------RAASPP--LRNDAHIEILVTDVNDNAP-VLR---DFQVIFNNFRDHFPSGEIGRIPAFDADVSDKLHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVSVSDGINEAKAIMQLSVRLITEDML---FNSVTVRLN 1327
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0303223)

HSP 1 Score: 168.318 bits (425), Expect = 1.846e-41
Identity = 185/717 (25.80%), Postives = 300/717 (41.84%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFI-FSQ-----FFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQ---KTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEK---VIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FELTES---GELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI------SLPSP-LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKI----IKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            ++ + V D ND++P F   + E  + E A    S +    A D D  +N  I Y ++   D    +Q      FR+      +        LD E    Y + + A D  + Q   +T T  ++++V D+NDN P F +  Y   + E+     +   V  I ATDAD   N  + Y   +  N Q Q +        +S  G + + + LD +    +  +  ++ A D G+  R + T + + +ID ND  P    +         + S +    +   I  V   D D G            N E+   I++++      V     D +   ++ IK  DREE     F+++ KD     +        +  + +V+ + D NDN P +    YE    E++P        +  +  +D D  +R ++++    ++  F +T     G + +  S D +  +   + + A+ S GR + T ++++ I D N+ AP+F    Y  +  E++   T V  V ATD D  +   I Y +       L SP  FSIN ++G I     LDRE    Y + + A D  N            V+    D+NDN P  K P  Q  ++ D+   +G  V  + A DPD+  NG + Y +    I+DG   F ID  SG   I     L    +   HL  +A D G P P SS V VQIRL
Sbjct:  449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVG-STVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSS---LDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI-IGGNTQSQFS-------IDSMSGDVSLVKPLDYE---SVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQF-------QESVLENVPVGYNIIRVQAYDSDEG-----------ANAEITYSISERDDNFPLAV-----DPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPK--------SASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPG----TPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGR-SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVT----DVNDNAPAFKSPLYQASILEDA--LVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS--FVIDPTSGT--IRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRL 1103

HSP 2 Score: 148.673 bits (374), Expect = 2.174e-35
Identity = 168/710 (23.66%), Postives = 289/710 (40.70%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRS-KKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD--LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---------ESGELFLVLSFDREAMESNPVRIFASVSDG---RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKIS---LPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGN 3176
            S  +  + S+DRE     S   +  +    L   +S ++ +  SV + V D NDN P+F++      V E+      D  +    A D D+  N  I Y        I     + Q S D++   + L   LDYE  + Y + + A D G+P ++ T ++ + V D NDN P F  + ++E+++EN+PV   +I + A D+D   N ++ Y  +   +N        F +  +   G +   + LD +      RF F V A D G  P+ + ++V I + DVND  P     Y   N   D+    P       +  V+  D D           +  ++E+  G N +    +   N +       +I   +  D ++       +   D+             ++ A + + I D N+  P +  +PY    +E+ P        + ++  +D D+G        +N      L          ++G +      DRE      + + A   DG     + T  + + + D ND AP F    Y+ + +E++   T V  V A+D D  + G I+Y +S   +    F I+  SG IR    LDRE    + +  +A+D  +            +     D+ND+ P   F   +  + +  N P+G  V  + A DPD   N  V Y II  D  N FS+ ++ G+
Sbjct:  527 SGVISTRSSLDRE----TSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA-------IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN--------FPLAVDPRTGWVQTIKPLDRE---EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTP-------VTTVTATDPDED---------SRLHYEITTG-NTRGRFAITSQNGRG------LITIAQSLDYKQEKRFLLTVAATDSGG----------RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVG----TTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTA--KDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLE----DVNDSPP--TFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169

HSP 3 Score: 107.071 bits (266), Expect = 1.053e-22
Identity = 144/617 (23.34%), Postives = 257/617 (41.65%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNN---QQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSP---RCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA---FELT---ESGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKS--GMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL------FSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPT 3266
            LD E+   +   ++A DD  P ++GT  +++ V D ND+ P FE   +E +I E   V   VI + ATD D  +N ++ Y     ++     Q      F I  +S  G I  +  LD + +   + +  +V+A D  ++    R +  +V ++++D ND  P  +    T     D+     +N+    +A +   D D G    +        + +I G    +    + ++  S D     +  +K  D E     +  I  +D  +  R        +N  +++V + D NDN P +  S ++    EN P      V   I+ V   D       ++  + S+    F L     +G +  +   DRE       ++ A    V     + +V I VQ +++ND  P F+   Y  N  E+    T V  V ATD D D     E         F+I S++  G+I +   LD ++++ + + + A D+    +        T      D N+  P  +  P    V  D+  P+G  V  + A D D+  N  ++Y + ++  N       FSI+ ++G    +V ++  + + TS +L+ V A D G P+
Sbjct:  422 LDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRI--DSRSGVISTRSSLDRETS---DSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNT----VAHIRATDADQGNNAAIR-------YAIIGGNTQSQ----FSIDSMSGD-----VSLVKPLDYESVRSYRLVIRAQDGGSPSR--------SNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP------VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND--PAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINIT------DANNFAPIFENAPYSASVFEDA--PVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTG---AIVTNAPLDRETTSGYLLTVTAKDGGNPS 986

HSP 4 Score: 106.686 bits (265), Expect = 1.226e-22
Identity = 130/504 (25.79%), Postives = 212/504 (42.06%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFN 2711
            GRS      +V I + D N+  P F        V E+A    + L +  A D D   N  ITY L E             I+P     ++    LD E    Y++ + A D GNP  + T  ++I V D NDN P F+  LY+ +I+E+  V   VI++ A+D D   NG++ Y  +      + +    F  V +   G I   + LD +    +  F     A D G+ P  S   V IR+ DVND  P    + IT          +PENS + + +  +   D D G   +V       ++ +I G +D  + +L       + Q    +  + E D E     +F+++        R    P  L N+A I +L+ D NDN P  L+   +F+   N  R+     ++G +   D D+ ++ +++++   +       S    LVLS            +  SVSDG       + ++V+++ E+ L   F+  T R N
Sbjct:  876 GRSDT---ATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVV-SATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLS-----DRDIEDGSF--VIDPTSGTIRTNKGLDRE---SVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKIT--------LYVPENSPVGSVVGEIHAHDPDEGVNAVV-------HYSIIGG-DDSNAFSLVTRPGSERAQ----LLTMTELDYESTRK-RFELVV-------RAASPP--LRNDAHIEILVTDVNDNAP-VLR---DFQVIFNNFRDHFPSGEIGRIPAFDADVSDKLHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVSVSDGINEAKAIMQLSVRLITEDML---FNSVTVRLN 1327
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0088214)

HSP 1 Score: 168.318 bits (425), Expect = 1.846e-41
Identity = 185/717 (25.80%), Postives = 300/717 (41.84%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFI-FSQ-----FFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQ---KTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEK---VIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FELTES---GELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI------SLPSP-LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKI----IKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            ++ + V D ND++P F   + E  + E A    S +    A D D  +N  I Y ++   D    +Q      FR+      +        LD E    Y + + A D  + Q   +T T  ++++V D+NDN P F +  Y   + E+     +   V  I ATDAD   N  + Y   +  N Q Q +        +S  G + + + LD +    +  +  ++ A D G+  R + T + + +ID ND  P    +         + S +    +   I  V   D D G            N E+   I++++      V     D +   ++ IK  DREE     F+++ KD     +        +  + +V+ + D NDN P +    YE    E++P        +  +  +D D  +R ++++    ++  F +T     G + +  S D +  +   + + A+ S GR + T ++++ I D N+ AP+F    Y  +  E++   T V  V ATD D  +   I Y +       L SP  FSIN ++G I     LDRE    Y + + A D  N            V+    D+NDN P  K P  Q  ++ D+   +G  V  + A DPD+  NG + Y +    I+DG   F ID  SG   I     L    +   HL  +A D G P P SS V VQIRL
Sbjct:  449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVG-STVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSS---LDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI-IGGNTQSQFS-------IDSMSGDVSLVKPLDYE---SVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQF-------QESVLENVPVGYNIIRVQAYDSDEG-----------ANAEITYSISERDDNFPLAV-----DPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPK--------SASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPG----TPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGR-SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVT----DVNDNAPAFKSPLYQASILEDA--LVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS--FVIDPTSGT--IRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRL 1103

HSP 2 Score: 148.673 bits (374), Expect = 2.174e-35
Identity = 168/710 (23.66%), Postives = 289/710 (40.70%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRS-KKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD--LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---------ESGELFLVLSFDREAMESNPVRIFASVSDG---RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKIS---LPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGN 3176
            S  +  + S+DRE     S   +  +    L   +S ++ +  SV + V D NDN P+F++      V E+      D  +    A D D+  N  I Y        I     + Q S D++   + L   LDYE  + Y + + A D G+P ++ T ++ + V D NDN P F  + ++E+++EN+PV   +I + A D+D   N ++ Y  +   +N        F +  +   G +   + LD +      RF F V A D G  P+ + ++V I + DVND  P     Y   N   D+    P       +  V+  D D           +  ++E+  G N +    +   N +       +I   +  D ++       +   D+             ++ A + + I D N+  P +  +PY    +E+ P        + ++  +D D+G        +N      L          ++G +      DRE      + + A   DG     + T  + + + D ND AP F    Y+ + +E++   T V  V A+D D  + G I+Y +S   +    F I+  SG IR    LDRE    + +  +A+D  +            +     D+ND+ P   F   +  + +  N P+G  V  + A DPD   N  V Y II  D  N FS+ ++ G+
Sbjct:  527 SGVISTRSSLDRE----TSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA-------IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN--------FPLAVDPRTGWVQTIKPLDRE---EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTP-------VTTVTATDPDED---------SRLHYEITTG-NTRGRFAITSQNGRG------LITIAQSLDYKQEKRFLLTVAATDSGG----------RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVG----TTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTA--KDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLE----DVNDSPP--TFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169

HSP 3 Score: 107.071 bits (266), Expect = 1.053e-22
Identity = 144/617 (23.34%), Postives = 257/617 (41.65%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNN---QQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSP---RCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA---FELT---ESGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKS--GMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL------FSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPT 3266
            LD E+   +   ++A DD  P ++GT  +++ V D ND+ P FE   +E +I E   V   VI + ATD D  +N ++ Y     ++     Q      F I  +S  G I  +  LD + +   + +  +V+A D  ++    R +  +V ++++D ND  P  +    T     D+     +N+    +A +   D D G    +        + +I G    +    + ++  S D     +  +K  D E     +  I  +D  +  R        +N  +++V + D NDN P +  S ++    EN P      V   I+ V   D       ++  + S+    F L     +G +  +   DRE       ++ A    V     + +V I VQ +++ND  P F+   Y  N  E+    T V  V ATD D D     E         F+I S++  G+I +   LD ++++ + + + A D+    +        T      D N+  P  +  P    V  D+  P+G  V  + A D D+  N  ++Y + ++  N       FSI+ ++G    +V ++  + + TS +L+ V A D G P+
Sbjct:  422 LDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRI--DSRSGVISTRSSLDRETS---DSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNT----VAHIRATDADQGNNAAIR-------YAIIGGNTQSQ----FSIDSMSGD-----VSLVKPLDYESVRSYRLVIRAQDGGSPSR--------SNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP------VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND--PAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINIT------DANNFAPIFENAPYSASVFEDA--PVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTG---AIVTNAPLDRETTSGYLLTVTAKDGGNPS 986

HSP 4 Score: 106.686 bits (265), Expect = 1.226e-22
Identity = 130/504 (25.79%), Postives = 212/504 (42.06%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFN 2711
            GRS      +V I + D N+  P F        V E+A    + L +  A D D   N  ITY L E             I+P     ++    LD E    Y++ + A D GNP  + T  ++I V D NDN P F+  LY+ +I+E+  V   VI++ A+D D   NG++ Y  +      + +    F  V +   G I   + LD +    +  F     A D G+ P  S   V IR+ DVND  P    + IT          +PENS + + +  +   D D G   +V       ++ +I G +D  + +L       + Q    +  + E D E     +F+++        R    P  L N+A I +L+ D NDN P  L+   +F+   N  R+     ++G +   D D+ ++ +++++   +       S    LVLS            +  SVSDG       + ++V+++ E+ L   F+  T R N
Sbjct:  876 GRSDT---ATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVV-SATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLS-----DRDIEDGSF--VIDPTSGTIRTNKGLDRE---SVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKIT--------LYVPENSPVGSVVGEIHAHDPDEGVNAVV-------HYSIIGG-DDSNAFSLVTRPGSERAQ----LLTMTELDYESTRK-RFELVV-------RAASPP--LRNDAHIEILVTDVNDNAP-VLR---DFQVIFNNFRDHFPSGEIGRIPAFDADVSDKLHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVSVSDGINEAKAIMQLSVRLITEDML---FNSVTVRLN 1327
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0330601)

HSP 1 Score: 168.318 bits (425), Expect = 1.871e-41
Identity = 185/717 (25.80%), Postives = 300/717 (41.84%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFI-FSQ-----FFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQ---KTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEK---VIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FELTES---GELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI------SLPSP-LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKI----IKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            ++ + V D ND++P F   + E  + E A    S +    A D D  +N  I Y ++   D    +Q      FR+      +        LD E    Y + + A D  + Q   +T T  ++++V D+NDN P F +  Y   + E+     +   V  I ATDAD   N  + Y   +  N Q Q +        +S  G + + + LD +    +  +  ++ A D G+  R + T + + +ID ND  P    +         + S +    +   I  V   D D G            N E+   I++++      V     D +   ++ IK  DREE     F+++ KD     +        +  + +V+ + D NDN P +    YE    E++P        +  +  +D D  +R ++++    ++  F +T     G + +  S D +  +   + + A+ S GR + T ++++ I D N+ AP+F    Y  +  E++   T V  V ATD D  +   I Y +       L SP  FSIN ++G I     LDRE    Y + + A D  N            V+    D+NDN P  K P  Q  ++ D+   +G  V  + A DPD+  NG + Y +    I+DG   F ID  SG   I     L    +   HL  +A D G P P SS V VQIRL
Sbjct:  449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVG-STVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSS---LDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI-IGGNTQSQFS-------IDSMSGDVSLVKPLDYE---SVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQF-------QESVLENVPVGYNIIRVQAYDSDEG-----------ANAEITYSISERDDNFPLAV-----DPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPK--------SASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPG----TPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGR-SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVT----DVNDNAPAFKSPLYQASILEDAL--VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS--FVIDPTSGT--IRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRL 1103

HSP 2 Score: 148.288 bits (373), Expect = 2.457e-35
Identity = 168/710 (23.66%), Postives = 289/710 (40.70%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRS-KKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD--LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---------ESGELFLVLSFDREAMESNPVRIFASVSDG---RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKIS---LPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGN 3176
            S  +  + S+DRE     S   +  +    L   +S ++ +  SV + V D NDN P+F++      V E+      D  +    A D D+  N  I Y        I     + Q S D++   + L   LDYE  + Y + + A D G+P ++ T ++ + V D NDN P F  + ++E+++EN+PV   +I + A D+D   N ++ Y  +   +N        F +  +   G +   + LD +      RF F V A D G  P+ + ++V I + DVND  P     Y   N   D+    P       +  V+  D D           +  ++E+  G N +    +   N +       +I   +  D ++       +   D+             ++ A + + I D N+  P +  +PY    +E+ P        + ++  +D D+G        +N      L          ++G +      DRE      + + A   DG     + T  + + + D ND AP F    Y+ + +E++   T V  V A+D D  + G I+Y +S   +    F I+  SG IR    LDRE    + +  +A+D  +            +     D+ND+ P   F   +  + +  N P+G  V  + A DPD   N  V Y II  D  N FS+ ++ G+
Sbjct:  527 SGVISTRSSLDRE----TSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA-------IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN--------FPLAVDPRTGWVQTIKPLDRE---EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTP-------VTTVTATDPDED---------SRLHYEITTG-NTRGRFAITSQNGRG------LITIAQSLDYKQEKRFLLTVAATDSGG----------RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVG----TTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTA--KDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLE----DVNDSPP--TFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169

HSP 3 Score: 107.071 bits (266), Expect = 9.873e-23
Identity = 144/617 (23.34%), Postives = 257/617 (41.65%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNN---QQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSP---RCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA---FELT---ESGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKS--GMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL------FSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPT 3266
            LD E+   +   ++A DD  P ++GT  +++ V D ND+ P FE   +E +I E   V   VI + ATD D  +N ++ Y     ++     Q      F I  +S  G I  +  LD + +   + +  +V+A D  ++    R +  +V ++++D ND  P  +    T     D+     +N+    +A +   D D G    +        + +I G    +    + ++  S D     +  +K  D E     +  I  +D  +  R        +N  +++V + D NDN P +  S ++    EN P      V   I+ V   D       ++  + S+    F L     +G +  +   DRE       ++ A    V     + +V I VQ +++ND  P F+   Y  N  E+    T V  V ATD D D     E         F+I S++  G+I +   LD ++++ + + + A D+    +        T      D N+  P  +  P    V  D+  P+G  V  + A D D+  N  ++Y + ++  N       FSI+ ++G    +V ++  + + TS +L+ V A D G P+
Sbjct:  422 LDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRI--DSRSGVISTRSSLDRETS---DSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNT----VAHIRATDADQGNNAAIR-------YAIIGGNTQSQ----FSIDSMSGD-----VSLVKPLDYESVRSYRLVIRAQDGGSPSR--------SNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP------VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND--PAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINIT------DANNFAPIFENAPYSASVFEDA--PVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTG---AIVTNAPLDRETTSGYLLTVTAKDGGNPS 986

HSP 4 Score: 106.686 bits (265), Expect = 1.360e-22
Identity = 130/504 (25.79%), Postives = 212/504 (42.06%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFN 2711
            GRS      +V I + D N+  P F        V E+A    + L +  A D D   N  ITY L E             I+P     ++    LD E    Y++ + A D GNP  + T  ++I V D NDN P F+  LY+ +I+E+  V   VI++ A+D D   NG++ Y  +      + +    F  V +   G I   + LD +    +  F     A D G+ P  S   V IR+ DVND  P    + IT          +PENS + + +  +   D D G   +V       ++ +I G +D  + +L       + Q    +  + E D E     +F+++        R    P  L N+A I +L+ D NDN P  L+   +F+   N  R+     ++G +   D D+ ++ +++++   +       S    LVLS            +  SVSDG       + ++V+++ E+ L   F+  T R N
Sbjct:  876 GRSDT---ATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVV-SATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLS-----DRDIEDGSF--VIDPTSGTIRTNKGLDRE---SVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKIT--------LYVPENSPVGSVVGEIHAHDPDEGVNAVV-------HYSIIGG-DDSNAFSLVTRPGSERAQ----LLTMTELDYESTRK-RFELVV-------RAASPP--LRNDAHIEILVTDVNDNAP-VLR---DFQVIFNNFRDHFPSGEIGRIPAFDADVSDKLHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVSVSDGINEAKAIMQLSVRLITEDML---FNSVTVRLN 1327
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304900)

HSP 1 Score: 168.318 bits (425), Expect = 1.942e-41
Identity = 185/717 (25.80%), Postives = 300/717 (41.84%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFI-FSQ-----FFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQ---KTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEK---VIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FELTES---GELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI------SLPSP-LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKI----IKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            ++ + V D ND++P F   + E  + E A    S +    A D D  +N  I Y ++   D    +Q      FR+      +        LD E    Y + + A D  + Q   +T T  ++++V D+NDN P F +  Y   + E+     +   V  I ATDAD   N  + Y   +  N Q Q +        +S  G + + + LD +    +  +  ++ A D G+  R + T + + +ID ND  P    +         + S +    +   I  V   D D G            N E+   I++++      V     D +   ++ IK  DREE     F+++ KD     +        +  + +V+ + D NDN P +    YE    E++P        +  +  +D D  +R ++++    ++  F +T     G + +  S D +  +   + + A+ S GR + T ++++ I D N+ AP+F    Y  +  E++   T V  V ATD D  +   I Y +       L SP  FSIN ++G I     LDRE    Y + + A D  N            V+    D+NDN P  K P  Q  ++ D+   +G  V  + A DPD+  NG + Y +    I+DG   F ID  SG   I     L    +   HL  +A D G P P SS V VQIRL
Sbjct:  449 TLQVNVLDCNDHSPTFEAEQFEASIREGATVG-STVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSS---LDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAI-IGGNTQSQFS-------IDSMSGDVSLVKPLDYE---SVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQF-------QESVLENVPVGYNIIRVQAYDSDEG-----------ANAEITYSISERDDNFPLAV-----DPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPK--------SASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPG----TPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGR-SDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVT----DVNDNAPAFKSPLYQASILEDAL--VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS--FVIDPTSGT--IRTNKGLDRESVAVFHLTAIAVDKGSP-PLSSTVEVQIRL 1103

HSP 2 Score: 148.673 bits (374), Expect = 2.267e-35
Identity = 168/710 (23.66%), Postives = 289/710 (40.70%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRS-KKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD--LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---------ESGELFLVLSFDREAMESNPVRIFASVSDG---RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKIS---LPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGN 3176
            S  +  + S+DRE     S   +  +    L   +S ++ +  SV + V D NDN P+F++      V E+      D  +    A D D+  N  I Y        I     + Q S D++   + L   LDYE  + Y + + A D G+P ++ T ++ + V D NDN P F  + ++E+++EN+PV   +I + A D+D   N ++ Y  +   +N        F +  +   G +   + LD +      RF F V A D G  P+ + ++V I + DVND  P     Y   N   D+    P       +  V+  D D           +  ++E+  G N +    +   N +       +I   +  D ++       +   D+             ++ A + + I D N+  P +  +PY    +E+ P        + ++  +D D+G        +N      L          ++G +      DRE      + + A   DG     + T  + + + D ND AP F    Y+ + +E++   T V  V A+D D  + G I+Y +S   +    F I+  SG IR    LDRE    + +  +A+D  +            +     D+ND+ P   F   +  + +  N P+G  V  + A DPD   N  V Y II  D  N FS+ ++ G+
Sbjct:  527 SGVISTRSSLDRE----TSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA-------IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN--------FPLAVDPRTGWVQTIKPLDRE---EQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTP-------VTTVTATDPDED---------SRLHYEITTG-NTRGRFAITSQNGRG------LITIAQSLDYKQEKRFLLTVAATDSGG----------RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVG----TTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTA--KDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLE----DVNDSPP--TFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGS 1169

HSP 3 Score: 107.071 bits (266), Expect = 1.089e-22
Identity = 144/617 (23.34%), Postives = 257/617 (41.65%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNN---QQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSP---RCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA---FELT---ESGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKS--GMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL------FSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPT 3266
            LD E+   +   ++A DD  P ++GT  +++ V D ND+ P FE   +E +I E   V   VI + ATD D  +N ++ Y     ++     Q      F I  +S  G I  +  LD + +   + +  +V+A D  ++    R +  +V ++++D ND  P  +    T     D+     +N+    +A +   D D G    +        + +I G    +    + ++  S D     +  +K  D E     +  I  +D  +  R        +N  +++V + D NDN P +  S ++    EN P      V   I+ V   D       ++  + S+    F L     +G +  +   DRE       ++ A    V     + +V I VQ +++ND  P F+   Y  N  E+    T V  V ATD D D     E         F+I S++  G+I +   LD ++++ + + + A D+    +        T      D N+  P  +  P    V  D+  P+G  V  + A D D+  N  ++Y + ++  N       FSI+ ++G    +V ++  + + TS +L+ V A D G P+
Sbjct:  422 LDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRI--DSRSGVISTRSSLDRETS---DSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNT----VAHIRATDADQGNNAAIR-------YAIIGGNTQSQ----FSIDSMSGD-----VSLVKPLDYESVRSYRLVIRAQDGGSPSR--------SNTTQLLVNVIDANDNAPRFYTSQFQESVLENVP------VGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDND--PAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINIT------DANNFAPIFENAPYSASVFEDA--PVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTG---AIVTNAPLDRETTSGYLLTVTAKDGGNPS 986

HSP 4 Score: 106.686 bits (265), Expect = 1.311e-22
Identity = 130/504 (25.79%), Postives = 212/504 (42.06%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFN 2711
            GRS      +V I + D N+  P F        V E+A    + L +  A D D   N  ITY L E             I+P     ++    LD E    Y++ + A D GNP  + T  ++I V D NDN P F+  LY+ +I+E+  V   VI++ A+D D   NG++ Y  +      + +    F  V +   G I   + LD +    +  F     A D G+ P  S   V IR+ DVND  P    + IT          +PENS + + +  +   D D G   +V       ++ +I G +D  + +L       + Q    +  + E D E     +F+++        R    P  L N+A I +L+ D NDN P  L+   +F+   N  R+     ++G +   D D+ ++ +++++   +       S    LVLS            +  SVSDG       + ++V+++ E+ L   F+  T R N
Sbjct:  876 GRSDT---ATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVV-SATDSDVGVNAQITYSLNEESINGLGSPDPFSINP-QTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLS-----DRDIEDGSF--VIDPTSGTIRTNKGLDRE---SVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKIT--------LYVPENSPVGSVVGEIHAHDPDEGVNAVV-------HYSIIGG-DDSNAFSLVTRPGSERAQ----LLTMTELDYESTRK-RFELVV-------RAASPP--LRNDAHIEILVTDVNDNAP-VLR---DFQVIFNNFRDHFPSGEIGRIPAFDADVSDKLHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVSVSDGINEAKAIMQLSVRLITEDML---FNSVTVRLN 1327
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 211.46 bits (537), Expect = 2.683e-55
Identity = 228/787 (28.97%), Postives = 366/787 (46.51%), Query Frame = 3 
Query:  990 EELHPNSLIGDLKPYLSSEMLQTLRLSNMNF------KTSDYFLLH-----SSYLKVKRSIDREEVCSKSS-KNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQI--SPDN--VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDN--PNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT-VSINVQILDENDLAPVFSLDTYRFNCVEN--SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ---KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIP 3263
            EEL  N LIG++   L+   + +   +  N       K  D  LL               IDRE++C   S ++++C   + +V   +     I + I V D NDN P F  P I   + EN   N+R +   +  A DPD   N    Y+L   +       F L I  +P+    P+L+    LD E +  Y+M++   D GNPQK+ T  +++ V D NDN P+F+++  E  I EN PV   V+++ ATDAD   N ++ Y F    +   +     F + T +  G I V++ LD + T  I++    V A D  +SP  +R T+TI + DVND  P I + YI +  +G    +  ++ IN  IA ++V DKD+   G V C++       ++ + D +                Y+++     D E      FKI+  D+  P+L +           A + V ++DENDNPP + +   E    EN  R+    + L  +  +D+D G        + P+ + F+L  ++G L     FDRE  E     + A  +  R  Q+  ++ V ILDEND +P F+ + ++F   EN   +ST VG +  TD D+     +   I   +  F ++  SG+I+     DRE++  Y   + A+DN +       +    V++ V+D+NDN P + +PP     KLV + S  P G  V  + A D D   N  + Y I+     +LF ID  +GN+ +  K ++++  L    LV+  SD G P
Sbjct:   32 EELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFA---IPSATDPDTGPNSVHKYELLNGQ-----SAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATR---RLFALNTTT--GLITVQRPLDREET-AIHK--LTVLASDGSSSP--ARATITINVTDVNDNAPNIDLRYIISPTNGTVMLS-EKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQ----------------YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQT----------ALVRVRLEDENDNPPIFTQPVIELAVMENNLRD----MFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYST-VGVITVTDADAGENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGS----PPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPL-SAIP-GSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGL--HRLVVNISDLGYP 760
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 211.46 bits (537), Expect = 2.683e-55
Identity = 228/787 (28.97%), Postives = 366/787 (46.51%), Query Frame = 3 
Query:  990 EELHPNSLIGDLKPYLSSEMLQTLRLSNMNF------KTSDYFLLH-----SSYLKVKRSIDREEVCSKSS-KNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQI--SPDN--VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDN--PNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT-VSINVQILDENDLAPVFSLDTYRFNCVEN--SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ---KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIP 3263
            EEL  N LIG++   L+   + +   +  N       K  D  LL               IDRE++C   S ++++C   + +V   +     I + I V D NDN P F  P I   + EN   N+R +   +  A DPD   N    Y+L   +       F L I  +P+    P+L+    LD E +  Y+M++   D GNPQK+ T  +++ V D NDN P+F+++  E  I EN PV   V+++ ATDAD   N ++ Y F    +   +     F + T +  G I V++ LD + T  I++    V A D  +SP  +R T+TI + DVND  P I + YI +  +G    +  ++ IN  IA ++V DKD+   G V C++       ++ + D +                Y+++     D E      FKI+  D+  P+L +           A + V ++DENDNPP + +   E    EN  R+    + L  +  +D+D G        + P+ + F+L  ++G L     FDRE  E     + A  +  R  Q+  ++ V ILDEND +P F+ + ++F   EN   +ST VG +  TD D+     +   I   +  F ++  SG+I+     DRE++  Y   + A+DN +       +    V++ V+D+NDN P + +PP     KLV + S  P G  V  + A D D   N  + Y I+     +LF ID  +GN+ +  K ++++  L    LV+  SD G P
Sbjct:   32 EELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFA---IPSATDPDTGPNSVHKYELLNGQ-----SAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATR---RLFALNTTT--GLITVQRPLDREET-AIHK--LTVLASDGSSSP--ARATITINVTDVNDNAPNIDLRYIISPTNGTVMLS-EKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQ----------------YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQT----------ALVRVRLEDENDNPPIFTQPVIELAVMENNLRD----MFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYST-VGVITVTDADAGENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGS----PPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPL-SAIP-GSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGL--HRLVVNISDLGYP 760
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016])

HSP 1 Score: 211.46 bits (537), Expect = 2.911e-55
Identity = 215/820 (26.22%), Postives = 360/820 (43.90%), Query Frame = 3 
Query:  897 FFA*LKMIIVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDL---KPYLSSEMLQTLRLS----NMNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILRL---ILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDN---VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQ-NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT-ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
             ++    ++V++L++L         + +  TEE  PN+LIG L   +    +  L  L +      ++ KT D +         + SIDRE +  C    + + C L     I    +   P  I   I + D NDNTP+F+ P +   + EN +   +   +  A D D   NG   Y L    +   +  F LQ++ D+   +P+L+ L  LD E+R  Y + +  VD G+P +  +  ++I + D NDN+P FE++ YE  + EN PV   V+++ A D+D   NG+V Y    PS+   +L      +  +   G I+VK  +D +    I+   F V A DNG   + S+  VTI + D ND  P I +  I    H D  + I E+  +   +A V V D+D G   +V C +     F+L               ND+   ++ Y ++     D E     + +I+  D  NP L   N   +Q+T          D NDN P +  + YE + +E     D+      +L+V   D  +    +L   P   FE+   +GE+ ++   DRE ++     + A+   G      T ++ V++LD ND  P F L+ Y F+  EN    + VG V   D D      ++  +   +  F I + +  I  T   DRE++  Y+ ++ A+D  +      R+    +++ VLD NDN P +  P       +D        V ++EA D D+  N  + + I+      LF I S+     I +    +   +    LV+   D G P  +++A+
Sbjct:    1 MWSRWSAMLVWILLLLCCSANVVNTILYQVTEEQPPNTLIGSLASDQGLPDTGHLYKLEVGAPYLRVDGKTGDIY-------TTENSIDRESLKDCRNLFEGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVG-ALFAIPVATDRDSGSNGIADYALTTGPEA--TNLFSLQVAQDSDEKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRL------LSIDRNTGIIFVKGSVDRE---EISILKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETG--------NDR---KRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVT----------DMNDNAPVFSPTLYEVEFFEENQPGDK------VLDVVATDADSGTNAELTYIPEGLFEINPNTGEVRVMSQLDREQLDHYQF-LVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKFMIQNGTYTILSTISFDREKESTYSFRLKAVDGGD----PPRSSYVGITINVLDENDNAPYVTKPANSSYKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEG---EITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTAL 766

HSP 2 Score: 69.3218 bits (168), Expect = 3.351e-11
Identity = 84/289 (29.07%), Postives = 130/289 (44.98%), Query Frame = 3 
Query: 2559 SFDREAM-------ESNP--VRIFASVSD---GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHV----EATDQDSDIYGPIEYKISL---PSPLFSI------NSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG---FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNP 3341
            S DRE++       E +P  +    S++D   G   + +   ++ILDEND  P FS      +  EN   T VG +     ATD+DS   G  +Y ++     + LFS+      + K   + V   LDRE ++ Y + I  +D  +           T++    D NDN PK  F        +  N P+GH V  ++A D D+  NG V+Y + +       L SID  +G +F  VK S+   +++     + A DNG P  KSS   V I +      +Q++N P
Sbjct:   80 SIDRESLKDCRNLFEGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPEN---THVGALFAIPVATDRDSGSNGIADYALTTGPEATNLFSLQVAQDSDEKLPQLIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITIT----DANDNVPK--FERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMRLLSIDRNTGIIF--VKGSVDREEISILKFYVQAKDNG-PQSKSSKALVTITV-----KDQNDNAP 351
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 211.075 bits (536), Expect = 2.956e-55
Identity = 228/789 (28.90%), Postives = 366/789 (46.39%), Query Frame = 3 
Query:  990 EELHPNSLIGDLKPYLSSEMLQTLRLSNMNF------KTSDYFLLH-----SSYLKVKRSIDREEVCSKSS-KNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQI--SPDN--VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFA--LPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDN--PNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT-VSINVQILDENDLAPVFSLDTYRFNCVEN--SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ---KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIP 3263
            EEL  N LIG++   L+   + +   +  N       K  D  LL               IDRE++C   S ++++C   + +V   +     I + I V D NDN P F  P I   + EN   N+R +   +  A DPD   N    Y+L   +       F L I  +P+    P+L+    LD E +  Y+M++   D GNPQK+ T  +++ V D NDN P+F+++  E  I EN PV   V+++ ATDAD   N ++ Y F   +    ++  A N       +  G I V++ LD + T  I++    V A D  +SP  +R T+TI + DVND  P I + YI +  +G    +  ++ IN  IA ++V DKD+   G V C++       ++ + D +                Y+++     D E      FKI+  D+  P+L +           A + V ++DENDNPP + +   E    EN  R+    + L  +  +D+D G        + P+ + F+L  ++G L     FDRE  E     + A  +  R  Q+  ++ V ILDEND +P F+ + ++F   EN   +ST VG +  TD D+     +   I   +  F ++  SG+I+     DRE++  Y   + A+DN +       +    V++ V+D+NDN P + +PP     KLV + S  P G  V  + A D D   N  + Y I+     +LF ID  +GN+ +  K ++++  L    LV+  SD G P
Sbjct:   32 EELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFA---IPSATDPDTGPNSVHKYELLNGQ-----SAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALN-------TTTGLITVQRPLDREET-AIHK--LTVLASDGSSSP--ARATITINVTDVNDNAPNIDLRYIISPTNGTVMLS-EKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQ----------------YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQT----------ALVRVRLEDENDNPPIFTQPVIELAVMENNLRD----MFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYST-VGVITVTDADAGENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGS----PPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPL-SAIP-GSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGL--HRLVVNISDLGYP 760
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 211.46 bits (537), Expect = 5.645e-55
Identity = 219/786 (27.86%), Postives = 346/786 (44.02%), Query Frame = 3 
Query:  990 EELHPNSLIGDL---KPYLSSEMLQTLRLS----NMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYG---RSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLY-LYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPD---NVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQD-QQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFK-SYENRPRNDEKRVKLGILEVSDKDLGN--RFYHKLMINPSQA--FEL-TESGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPT 3266
            EE  P++LIG L   +    +  L  L +      ++ KT D F         +  IDRE +    +K   C L   +      +++ P  I   I V DINDNTP+F  P +   V EN +  +  L+ +  A D D + NG   Y L    + +    F LQ++ D    +P+L+ L  LD E++  Y + + AVD GNP +  +  +++ + D NDN P FEK+ YE  + EN P+   V+++ A D+D   NG++ Y      +   +L      +  +   G IYVK  LD +    IN   F V A D G SP+ S+T V+I + D ND  P + +  I    H D  + I E+  +   +A V V DKD G   +V C +                  L   +D S D ++ Y ++     D E     + +I+  D  NP L   N   +Q+T          D NDN P +  + +E + + EN+P   EK V+   +  SD D G      + ++ + S    FE+   SGE+      DRE  +    R+ A+      +  T ++ +++LD ND  P F L  Y F+ +EN    + VG V   D D      ++  +      F I + +G I  +   DRE++  Y  ++ A+D  +      R+    V++ VLD NDN P +  P     + +         V  +EA D D   N  + Y I   +  +LF I   +G   I +   L+        LV+  SD G P+
Sbjct:   31 EEQPPSTLIGSLAADQGLPDTGHLYKLEVGAPYLRVDGKTGDIF-------TTEIPIDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVPENTH--MGALFSIPLATDKDTERNGVADYTLTAGPEAV--ALFGLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNAPKFEKSSYEAEVAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKL------LRIDRSSGIIYVKGPLDRE---EINNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGD-----------VPFQLRPASDSSVDNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVT----------DTNDNSPIFSPTLFEVEFAEENQP--GEKVVE---VVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGD----PPRSSYVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHDLFYISPSNGE--ITLTKELTRKHSGLHRLVIKVSDRGKPS 764
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 210.305 bits (534), Expect = 1.915e-54
Identity = 242/873 (27.72%), Postives = 371/873 (42.50%), Query Frame = 3 
Query:  777 KWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPEFFA*LKMIIVFVLMV---LNIRGFGCKNVHFVTTEELHPNSLIGDLKP---YLSSEMLQTLRLSN----MNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILR--LILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLY-LYEAEDPDRQENGTITYKL---QENKDFIFSQFFRLQISPDN---VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQ-NFELIQGINDKESLNLYRVNDKSQD-QQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLG--NRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            KW    G   V+ P G+ H      L+ +  +L  + N    A  +      L +   L I G   K V +   EE  PN LIG L     Y  S+ L  L L +    ++ KT D +         + SIDRE +  C        C L   + +    S  P  +   I + DINDNTP FN P I   + EN N  +  L+ +  A D D   NG  +Y+L    E +D      F LQ++ D     P+L+ + +LD E R  Y + +   D G P +  +  ++I + D NDN P FEK  YE  + EN P+   V+++ A D+D   N +++Y F   S+  ++L      +  +   G I V+  +D +    +    F V A D G +P+ +RT VTI I D ND +P+I +       H    + I E+  +   +A V V D D G    V C +     F+L Q            V+D   D ++ Y ++     D E       +I+  D  NP L   N   +Q+T          D NDN P + +S  E    EN   ND       ++EVS  D D G  ++ ++ ++ +PS     +   +SG++ +    DRE  E     + A V  G      T S+ + +LD ND  P F L+ Y F+ +EN    + VG V   D D      I   +   S  F I + +G I  +   DRE +  Y  ++ A+D  +      R+    V++ VLD NDN P I  P       +      G  V  + A D D   N  + Y I     F LF I   +G   + ++ ++         LV+  +D G P+   +A+
Sbjct:    2 KW----GLCLVSKPSGRSH----ERLEHRMSILKDRPNSLKLAMKRTATACFLWLFFQLPILGSSTK-VAYRVPEEQPPNILIGSLASDYGYPDSKHLYKLELGHPYLRVDGKTGDIY-------TTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGM--LFPIPAATDRDSGVNGVSSYELIVGPEAQDL-----FGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRL------LHLDRSTGLITVQGPIDRE---DVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ------------VSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVT----------DVNDNAPVFSQSLMEVVFPENNDINDL------VMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVA-VDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGD----PPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGE--VTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTAL 807

HSP 2 Score: 105.145 bits (261), Expect = 4.733e-22
Identity = 148/590 (25.08%), Postives = 243/590 (41.19%), Query Frame = 3 
Query: 1101 LLH----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVY---GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD-------LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKS---PYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRF---YHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKIS 2804
            LLH    +  + V+  IDRE+V +         L+  +V    G + K +   V+IT+ D NDN P         V  +   A +S+       + L +  D D   N  +T  +  +  F   Q             L     LDYE  K Y +E++AVD GNP  + T  +K++V D NDN P+F ++L E    EN  + + V+E+ ATDADS  N +++Y   LP  +    A   F I  +S  G+I V   LD +   +   +DF V A D G        +V I ++D ND  P   +N       G   S +      + +  V+V+D D G    +   +  ++ E +                  Q+    I+ +I  FDRE      F++   D  +  R        ++   + + + DENDN P  +      Y++ + +  P      V+       D D G      Y     NP + F+++  +GE+ L  +  R+    +  R+   V+D G+ ++  +  V           F ++    N  +    T +GH + T  D DI G  EY++S
Sbjct:  329 LLHLDRSTGLITVQGPIDREDVGT---------LKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSI-LPDPS----ARGIFSINPDS--GQIRVNTVLDRE---QREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLN-------GYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFV-----------------IQNGTGTILSSIS-FDREHQSTYTFRLKAVDGGDPPR--------SSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVR-----AEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLH--RLVVKVTDKGKPSRHGTALVH----------FYINETLTN--QTLVETLLGHSQFTPLDIDIAGDPEYELS 847
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 207.994 bits (528), Expect = 4.640e-54
Identity = 231/821 (28.14%), Postives = 355/821 (43.24%), Query Frame = 3 
Query:  924 VFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKP---YLSSEMLQTLRLSN----MNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILR--LILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLY-LYEAEDPDRQENGTITYKL---QENKDFIFSQFFRLQISPDN---VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQ-NFELIQGINDKESLNLYRVNDKSQD-QQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLG--NRFYHKLMINPSQA--FELT-ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            +++   L I G   K V +   EE  PN LIG L     Y  S+ L  L L +    ++ KT D +   +S       IDRE +  C        C L   + +    S  P  +   I + DINDNTP FN P I   + EN N  +  L+ +  A D D   NG  +Y+L    E +D      F LQ++ D     P+L+ + +LD E R  Y + +   D G P +  +  ++I + D NDN P FEK  YE  + EN P+   V+++ A D+D   N +++Y F   S+  ++L      +  +   G I V+  +D +    +    F V A D G +P+ +RT VTI I D ND +P+I +       H    + I E+  +   +A V V D D G    V C +     F+L Q            V+D   D ++ Y ++     D E       +I+  D  NP L   N   +Q+T          D NDN P + +S  E    EN   ND       ++EVS  D D G  ++ ++ ++ +PS    F +  +SG++ +    DRE  E     + A V  G      T S+ + +LD ND  P F L+ Y F+ +EN    + VG V   D D      I   +   S  F I + +G I  +   DRE +  Y  ++ A+D  +      R+    V++ VLD NDN P I  P       +      G  V  + A D D   N  + Y I     F LF I   +G   + ++ ++         LV+  +D G P+   +A+
Sbjct:   54 LWLFFQLPILGSSTK-VAYRVPEEQPPNILIGSLASDYGYPDSKHLYKLELGHPYLRVDGKTGDIYTTETS-------IDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGM--LFPIPAATDRDSGVNGVSSYELIVGPEAQDL-----FGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRL------LHLDRSTGLITVQGPIDRE---DVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ------------VSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVT----------DVNDNAPVFSQSLMEVVFPENNDINDL------VMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVA-VDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGD----PPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGE--VTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTAL 815

HSP 2 Score: 104.375 bits (259), Expect = 6.976e-22
Identity = 148/590 (25.08%), Postives = 243/590 (41.19%), Query Frame = 3 
Query: 1101 LLH----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVY---GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD-------LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKS---PYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRF---YHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKIS 2804
            LLH    +  + V+  IDRE+V +         L+  +V    G + K +   V+IT+ D NDN P         V  +   A +S+       + L +  D D   N  +T  +  +  F   Q             L     LDYE  K Y +E++AVD GNP  + T  +K++V D NDN P+F ++L E    EN  + + V+E+ ATDADS  N +++Y   LP  +    A   F I  +S  G+I V   LD +   +   +DF V A D G        +V I ++D ND  P   +N       G   S +      + +  V+V+D D G    +   +  ++ E +                  Q+    I+ +I  FDRE      F++   D  +  R        ++   + + + DENDN P  +      Y++ + +  P      V+       D D G      Y     NP + F+++  +GE+ L  +  R+    +  R+   V+D G+ ++  +  V           F ++    N  +    T +GH + T  D DI G  EY++S
Sbjct:  337 LLHLDRSTGLITVQGPIDREDVGT---------LKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSI-LPDPS----ARGIFSINPDS--GQIRVNTVLDRE---QREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLN-------GYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFV-----------------IQNGTGTILSSIS-FDREHQSTYTFRLKAVDGGDPPR--------SSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVR-----AEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLH--RLVVKVTDKGKPSRHGTALVH----------FYINETLTN--QTLVETLLGHSQFTPLDIDIAGDPEYELS 855
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 207.608 bits (527), Expect = 7.395e-54
Identity = 231/821 (28.14%), Postives = 355/821 (43.24%), Query Frame = 3 
Query:  924 VFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKP---YLSSEMLQTLRLSN----MNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILR--LILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLY-LYEAEDPDRQENGTITYKL---QENKDFIFSQFFRLQISPDN---VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQ-NFELIQGINDKESLNLYRVNDKSQD-QQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLG--NRFYHKLMINPSQA--FELT-ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            +++   L I G   K V +   EE  PN LIG L     Y  S+ L  L L +    ++ KT D +   +S       IDRE +  C        C L   + +    S  P  +   I + DINDNTP FN P I   + EN N  +  L+ +  A D D   NG  +Y+L    E +D      F LQ++ D     P+L+ + +LD E R  Y + +   D G P +  +  ++I + D NDN P FEK  YE  + EN P+   V+++ A D+D   N +++Y F   S+  ++L      +  +   G I V+  +D +    +    F V A D G +P+ +RT VTI I D ND +P+I +       H    + I E+  +   +A V V D D G    V C +     F+L Q            V+D   D ++ Y ++     D E       +I+  D  NP L   N   +Q+T          D NDN P + +S  E    EN   ND       ++EVS  D D G  ++ ++ ++ +PS    F +  +SG++ +    DRE  E     + A V  G      T S+ + +LD ND  P F L+ Y F+ +EN    + VG V   D D      I   +   S  F I + +G I  +   DRE +  Y  ++ A+D  +      R+    V++ VLD NDN P I  P       +      G  V  + A D D   N  + Y I     F LF I   +G   + ++ ++         LV+  +D G P+   +A+
Sbjct:   54 LWLFFQLPILGSSTK-VAYRVPEEQPPNILIGSLASDYGYPDSKHLYKLELGHPYLRVDGKTGDIYTTETS-------IDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGM--LFPIPAATDRDSGVNGVSSYELIVGPEAQDL-----FGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRL------LHLDRSTGLITVQGPIDRE---DVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ------------VSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVT----------DVNDNAPVFSQSLMEVVFPENNDINDL------VMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVA-VDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGD----PPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGE--VTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTAL 815

HSP 2 Score: 103.99 bits (258), Expect = 1.099e-21
Identity = 148/590 (25.08%), Postives = 243/590 (41.19%), Query Frame = 3 
Query: 1101 LLH----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVY---GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD-------LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKS---PYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRF---YHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKIS 2804
            LLH    +  + V+  IDRE+V +         L+  +V    G + K +   V+IT+ D NDN P         V  +   A +S+       + L +  D D   N  +T  +  +  F   Q             L     LDYE  K Y +E++AVD GNP  + T  +K++V D NDN P+F ++L E    EN  + + V+E+ ATDADS  N +++Y   LP  +    A   F I  +S  G+I V   LD +   +   +DF V A D G        +V I ++D ND  P   +N       G   S +      + +  V+V+D D G    +   +  ++ E +                  Q+    I+ +I  FDRE      F++   D  +  R        ++   + + + DENDN P  +      Y++ + +  P      V+       D D G      Y     NP + F+++  +GE+ L  +  R+    +  R+   V+D G+ ++  +  V           F ++    N  +    T +GH + T  D DI G  EY++S
Sbjct:  337 LLHLDRSTGLITVQGPIDREDVGT---------LKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSI-LPDPS----ARGIFSINPDS--GQIRVNTVLDRE---QREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLN-------GYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFV-----------------IQNGTGTILSSIS-FDREHQSTYTFRLKAVDGGDPPR--------SSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVR-----AEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLH--RLVVKVTDKGKPSRHGTALVH----------FYINETLTN--QTLVETLLGHSQFTPLDIDIAGDPEYELS 855
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 207.994 bits (528), Expect = 8.129e-54
Identity = 230/821 (28.01%), Postives = 354/821 (43.12%), Query Frame = 3 
Query:  924 VFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKP---YLSSEMLQTLRLSN----MNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILR--LILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLY-LYEAEDPDRQENGTITYKL---QENKDFIFSQFFRLQISPDN---VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQ-NFELIQGINDKESLNLYRVNDKSQD-QQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLG--NRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            +++   L I G   K V +   EE  PN LIG L     Y  S+ L  L L +    ++ KT D +         + SIDRE +  C        C L   + +    S  P  +   I + DINDNTP FN P I   + EN N  +  L+ +  A D D   NG  +Y+L    E +D      F LQ++ D     P+L+ + +LD E R  Y + +   D G P +  +  ++I + D NDN P FEK  YE  + EN P+   V+++ A D+D   N +++Y F   S+  ++L      +  +   G I V+  +D +    +    F V A D G +P+ +RT VTI I D ND +P+I +       H    + I E+  +   +A V V D D G    V C +     F+L Q            V+D   D ++ Y ++     D E       +I+  D  NP L   N   +Q+T          D NDN P + +S  E    EN   ND       ++EVS  D D G  ++ ++ ++ +PS     +   +SG++ +    DRE  E     + A V  G      T S+ + +LD ND  P F L+ Y F+ +EN    + VG V   D D      I   +   S  F I + +G I  +   DRE +  Y  ++ A+D  +      R+    V++ VLD NDN P I  P       +      G  V  + A D D   N  + Y I     F LF I   +G   + ++ ++         LV+  +D G P+   +A+
Sbjct:   54 LWLFFQLPILGSSTK-VAYRVPEEQPPNILIGSLASDYGYPDSKHLYKLELGHPYLRVDGKTGDIY-------TTETSIDRESLRECQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGM--LFPIPAATDRDSGVNGVSSYELIVGPEAQDL-----FGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRL------LHLDRSTGLITVQGPIDRE---DVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ------------VSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVT----------DVNDNAPVFSQSLMEVVFPENNDINDL------VMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVA-VDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGD----PPRSSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGE--VTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTAL 815

HSP 2 Score: 104.76 bits (260), Expect = 6.630e-22
Identity = 148/590 (25.08%), Postives = 243/590 (41.19%), Query Frame = 3 
Query: 1101 LLH----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVY---GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD-------LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKS---PYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRF---YHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKIS 2804
            LLH    +  + V+  IDRE+V +         L+  +V    G + K +   V+IT+ D NDN P         V  +   A +S+       + L +  D D   N  +T  +  +  F   Q             L     LDYE  K Y +E++AVD GNP  + T  +K++V D NDN P+F ++L E    EN  + + V+E+ ATDADS  N +++Y   LP  +    A   F I  +S  G+I V   LD +   +   +DF V A D G        +V I ++D ND  P   +N       G   S +      + +  V+V+D D G    +   +  ++ E +                  Q+    I+ +I  FDRE      F++   D  +  R        ++   + + + DENDN P  +      Y++ + +  P      V+       D D G      Y     NP + F+++  +GE+ L  +  R+    +  R+   V+D G+ ++  +  V           F ++    N  +    T +GH + T  D DI G  EY++S
Sbjct:  337 LLHLDRSTGLITVQGPIDREDVGT---------LKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSI-LPDPS----ARGIFSINPDS--GQIRVNTVLDRE---QREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLN-------GYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFV-----------------IQNGTGTILSSIS-FDREHQSTYTFRLKAVDGGDPPR--------SSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVR-----AEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLH--RLVVKVTDKGKPSRHGTALVH----------FYINETLTN--QTLVETLLGHSQFTPLDIDIAGDPEYELS 855
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: ENSXETT00000047804.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938])

HSP 1 Score: 206.838 bits (525), Expect = 1.105e-53
Identity = 226/807 (28.00%), Postives = 351/807 (43.49%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEM---LQTLRLSNMNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITN--NGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA--FEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT-VSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ-KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSH-----LVLVASDNGIPTP 3269
            ++ VL+   +   G +  +++  EEL  N LIG+L   L+  +   L T     + +KT D  L+               IDRE++CS     N C   + +     +    + +   + DINDN+P F    I   + EN   N+R S   +  A DPD   NG   Y+L + ++ +F          D  P+L+    LD E +  Y+M++   D GNP ++ T  +++ V D NDN P+F++   E  I E+  V   V ++ ATDAD   N K+++ F    N    LA  +F I  ++  G I VK+ LD + +P        V A D  ++P  SR TVTI I D+ND  P I   YI N  NG    S   P   +N  IA ++V DKD+   G V C+ T+ +               +R+     +Q  ++++     D E       KI+  D      + + P  L   A +++ I DENDN P +          EN P   E    L  +  +D D G       M+ P+    F L   +G L  V   DRE  +     + A  +     QT  ++ + +LD+ND +P F+ + Y F   EN      VG +  TD DS     +   +      F I+  +G+IR     DRE++  Y  Q+ A+D  + ++      T  V     D+NDN P    P       ++ ++   G  V  + A D D   N  + Y II  +   LF+I  +SGN+      +L E  L   H     LV+  +D+G P P
Sbjct:   29 LLAVLIACIVFESGAQEKNYIVREELPENVLIGNLLKDLNLTLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYS---VPSAIDPDVGVNGIQHYELLKGQN-VFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFG---NQITNLAKRHFAI--DNNTGLITVKEPLDREESP---YHKLTVLASDGSSTP--SRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAP---LNTKIALITVTDKDADLNGKVTCF-TDHDVP-------------FRLKPVFDNQ--FLLETAAPLDYESTREYAIKIVASD------SGKPP--LNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTE----LTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVE----DVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNI------TLKEKLLAGDHGVLYKLVIKVNDSGKPEP 780
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692])

HSP 1 Score: 211.075 bits (536), Expect = 4.249e-55
Identity = 219/797 (27.48%), Postives = 347/797 (43.54%), Query Frame = 3 
Query:  972 VHFVTTEELHPNSLIGDLKP-YLSSEMLQTLRLS------NMNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILRL---ILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLY-LYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDN---VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQ-NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGN--RFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDGRYNQ-TVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            V +   EE  PN+LIG L   Y   ++    +L        ++ KT D F   +S       IDRE +  C      N CIL     I    ++  P  +   I V DINDNTP F  P I   + EN N  +  L+ +  A D D   NG  +Y+LQ   +    + F LQ++ D     P+L+ +  LD E    Y + +   D GNP +  +  +++ V D NDN P FE+  YE  + EN P+   VI++ A D+D   N +++Y F       ++L      +  +   G I V+  +D +    ++   F V A D G +P+ +R  V + + D+ND  P I +  I    H D  + I E+ +    +A V V D+D G    V C +     F+L Q                S  ++ Y ++     D E+      +I+  D+ N       P+  TN  ++ V+  D NDN P + +S  E       P N++    +  +  SD D G+     + L   P+     T   E+GE+ +  S DRE  +S  +++ A+       Q T ++ V +LD ND  P F L  Y F+ +EN  + + VG V   D D      ++  +   +  F I + +G I  +   DRE++  Y  Q+ A+D         R+    V++ VLD NDN P I  P      ++     +G  V  + A D D   N  ++Y I   + + LF I S SG   I ++  +         LV+  SD G P    +A+
Sbjct:   38 VVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETS-------IDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTN--IGSLFPIPLATDRDAGPNGVASYELQAGPEA--QELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRL------LRLDRNTGLITVQGPVDRE---DLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQA-----------SETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGN------PPLSSTNSLKVQVV--DVNDNAPVFTQSITEVAF----PENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGG----VPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSG--AITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTAL 785
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692])

HSP 1 Score: 211.075 bits (536), Expect = 4.249e-55
Identity = 219/797 (27.48%), Postives = 347/797 (43.54%), Query Frame = 3 
Query:  972 VHFVTTEELHPNSLIGDLKP-YLSSEMLQTLRLS------NMNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILRL---ILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLY-LYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDN---VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQ-NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGN--RFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDGRYNQ-TVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            V +   EE  PN+LIG L   Y   ++    +L        ++ KT D F   +S       IDRE +  C      N CIL     I    ++  P  +   I V DINDNTP F  P I   + EN N  +  L+ +  A D D   NG  +Y+LQ   +    + F LQ++ D     P+L+ +  LD E    Y + +   D GNP +  +  +++ V D NDN P FE+  YE  + EN P+   VI++ A D+D   N +++Y F       ++L      +  +   G I V+  +D +    ++   F V A D G +P+ +R  V + + D+ND  P I +  I    H D  + I E+ +    +A V V D+D G    V C +     F+L Q                S  ++ Y ++     D E+      +I+  D+ N       P+  TN  ++ V+  D NDN P + +S  E       P N++    +  +  SD D G+     + L   P+     T   E+GE+ +  S DRE  +S  +++ A+       Q T ++ V +LD ND  P F L  Y F+ +EN  + + VG V   D D      ++  +   +  F I + +G I  +   DRE++  Y  Q+ A+D         R+    V++ VLD NDN P I  P      ++     +G  V  + A D D   N  ++Y I   + + LF I S SG   I ++  +         LV+  SD G P    +A+
Sbjct:   38 VVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETS-------IDREGLRECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTN--IGSLFPIPLATDRDAGPNGVASYELQAGPEA--QELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRL------LRLDRNTGLITVQGPVDRE---DLSTLRFSVLAKDRGATPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQA-----------SETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGN------PPLSSTNSLKVQVV--DVNDNAPVFTQSITEVAF----PENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGG----VPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSG--AITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTAL 785
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849])

HSP 1 Score: 207.994 bits (528), Expect = 5.423e-54
Identity = 232/805 (28.82%), Postives = 368/805 (45.71%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGN--RFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLV--VIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIP 3263
            I  VL+   +   G +  ++   EE+  N LIGDL   L+  ++    L+      + +KT D  L+               IDRE++C+    +  C   + +     +    + +   + DINDN P F    I   + EN+  N+R S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F +   E +I EN P+   V ++ ATDAD  EN ++++ F   SN    +A   F + T +  G I VK+ LD + +P       +V A D G++P  +R TV + + D+ND  P I + YI N  +G  +  + EN+ +N  IA ++V+DKDS   G V C+             D E    +R+     +Q  ++++     D E       K++  D        + P  L   + +++ + DENDN P + +S   F S  + P N+    +L  +  +D D G      + L  +    F L + +G L  V   DRE  E     + A    +     N TV + V  LD+ND +P+F+ + Y F   E+      VG +  TD D      +   I   +  F+I+ +SG+IR     DRE +E Y   + A D         R+ T  V++ V+D+NDN P    PP       V+ S  P G  VF + A D D+  N  V Y I+      LF I+  SGN+ +  K  +S+  L   H V+V A+D G P
Sbjct:    9 IFAVLLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPDKSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYS---LPAAIDPDIGINGVQNYQLIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYF---SNLVSNIAKRLFHLNTTT--GLITVKEPLDREESP---SHKLLVLATDGGSTP--ARATVLVNVTDINDNVPSIDIRYIVNPTNG--TVLLSENAPLNTKIALITVMDKDSEHNGRVTCF------------TDHEV--PFRLRPVFSNQ--FLLETAAFLDFESTREYAIKLLAAD------AGKPP--LNQSSMLLIKVKDENDNAPVFTQS---FISL-SVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTV--LDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGR----VSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNP-GTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGL---HRVIVKANDLGQP 759
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849])

HSP 1 Score: 206.838 bits (525), Expect = 7.544e-54
Identity = 232/805 (28.82%), Postives = 368/805 (45.71%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGN--RFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLV--VIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIP 3263
            I  VL+   +   G +  ++   EE+  N LIGDL   L+  ++    L+      + +KT D  L+               IDRE++C+    +  C   + +     +    + +   + DINDN P F    I   + EN+  N+R S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F +   E +I EN P+   V ++ ATDAD  EN ++++ F   SN    +A   F + T +  G I VK+ LD + +P       +V A D G++P  +R TV + + D+ND  P I + YI N  +G  +  + EN+ +N  IA ++V+DKDS   G V C+             D E    +R+     +Q  ++++     D E       K++  D        + P  L   + +++ + DENDN P + +S   F S  + P N+    +L  +  +D D G      + L  +    F L + +G L  V   DRE  E     + A    +     N TV + V  LD+ND +P+F+ + Y F   E+      VG +  TD D      +   I   +  F+I+ +SG+IR     DRE +E Y   + A D         R+ T  V++ V+D+NDN P    PP       V+ S  P G  VF + A D D+  N  V Y I+      LF I+  SGN+ +  K  +S+  L   H V+V A+D G P
Sbjct:    9 IFAVLLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPDKSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYS---LPAAIDPDIGINGVQNYQLIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYF---SNLVSNIAKRLFHLNTTT--GLITVKEPLDREESP---SHKLLVLATDGGSTP--ARATVLVNVTDINDNVPSIDIRYIVNPTNG--TVLLSENAPLNTKIALITVMDKDSEHNGRVTCF------------TDHEV--PFRLRPVFSNQ--FLLETAAFLDFESTREYAIKLLAAD------AGKPP--LNQSSMLLIKVKDENDNAPVFTQS---FISL-SVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTV--LDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGR----VSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNP-GTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGL---HRVIVKANDLGQP 759
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849])

HSP 1 Score: 207.994 bits (528), Expect = 8.845e-54
Identity = 232/805 (28.82%), Postives = 368/805 (45.71%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGN--RFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLV--VIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIP 3263
            I  VL+   +   G +  ++   EE+  N LIGDL   L+  ++    L+      + +KT D  L+               IDRE++C+    +  C   + +     +    + +   + DINDN P F    I   + EN+  N+R S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F +   E +I EN P+   V ++ ATDAD  EN ++++ F   SN    +A   F + T +  G I VK+ LD + +P       +V A D G++P  +R TV + + D+ND  P I + YI N  +G  +  + EN+ +N  IA ++V+DKDS   G V C+             D E    +R+     +Q  ++++     D E       K++  D        + P  L   + +++ + DENDN P + +S   F S  + P N+    +L  +  +D D G      + L  +    F L + +G L  V   DRE  E     + A    +     N TV + V  LD+ND +P+F+ + Y F   E+      VG +  TD D      +   I   +  F+I+ +SG+IR     DRE +E Y   + A D         R+ T  V++ V+D+NDN P    PP       V+ S  P G  VF + A D D+  N  V Y I+      LF I+  SGN+ +  K  +S+  L   H V+V A+D G P
Sbjct:    9 IFAVLLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPDKSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYS---LPAAIDPDIGINGVQNYQLIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYF---SNLVSNIAKRLFHLNTTT--GLITVKEPLDREESP---SHKLLVLATDGGSTP--ARATVLVNVTDINDNVPSIDIRYIVNPTNG--TVLLSENAPLNTKIALITVMDKDSEHNGRVTCF------------TDHEV--PFRLRPVFSNQ--FLLETAAFLDFESTREYAIKLLAAD------AGKPP--LNQSSMLLIKVKDENDNAPVFTQS---FISL-SVPENNSPGAQLTKISATDADSGQNAEISYMLGFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTV--LDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGR----VSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNP-GTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLKEKCMVSDLGL---HRVIVKANDLGQP 759
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q9BZA8|PC11Y_HUMAN (Protocadherin-11 Y-linked OS=Homo sapiens OX=9606 GN=PCDH11Y PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.856e-56
Identity = 233/814 (28.62%), Postives = 377/814 (46.31%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPP---PQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPTPKSSAVSVQI 3296
            I  VL+V  +   G +  ++   EE+  N LIG+L   L+  ++    L+      + +KT D  L+               IDRE++C+   ++  C   + +     +    + +   + DINDN P F    I   + EN+ A  S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F++   E +I EN PV   V ++ ATDAD  EN K+++ F   SN    +A   F +   +  G I +K+ LD + TP       +V A D G  P  +R  V + + DVND  P I + YI N    +++  + EN  +N  IA ++V DKD+   G V C+             D E    +R+     +Q  ++++N    D E       K++  D        + P  L   A + + + DENDN P + +S   F +  + P N+   ++L  +  +D D G       ++ P    E +    +G L +V   DRE  +     I A   +G       V++ V I+D+ND +PVF+ + Y+F   EN      VG +  TD D      +   I   +  F+I+S++G+IR     DRE++E Y   + A D         R+ +  V++ V+D+NDN P    PP     +LV+  +N   G  VF + A D D   N  V Y I+     +LF+ID ++GN+ ++ K  +++  L   H VLV A+D G P    S V V +
Sbjct:   41 IFAVLLVCVVFHSGAQEKNYTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS-AINSKYTLPAAVDPDVGINGVQNYELIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSF---SNLVSNIARRLFHL--NATTGLITIKEPLDREETP---NHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP--VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCF------------TDHEI--PFRLRPVFSNQ--FLLENAAYLDYESTKEYAIKLLAAD------AGKPP--LNQSAMLFIKVKDENDNAPVFTQS---FVTV-SIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK-DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKANDLGQPDSLFSVVIVNL 802
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.590e-56
Identity = 231/814 (28.38%), Postives = 374/814 (45.95%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ---KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPTPKSSAVSVQI 3296
            I  VL+   +   G +  ++   EE+  N LIGDL   L+  ++    L+      + +KT D  L+               IDRE++C+   ++  C   + +     +    + +   + DINDN P F    I   + EN+ A  S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F++   E +I EN PV   V ++ ATDAD  EN K+++ F   SN    +A   F +   +  G I +K+ LD + TP       +V A D G  P  +R  V + + DVND  P I + YI N    +++  + EN  +N  IA ++V DKD+   G V C+ T+                 +R+     +Q  ++++     D E       K++  D        + P  L   A + + + DENDN P + +S   F +  + P N+   ++L  +  +D D G       ++ P    E +    +G L +V   DRE  +     I A   +G       V++ V I+D+ND +PVF+ + Y F   EN      VG +  TD D      +   I   +  F+I+S++G+IR     DRE++E Y   + A D         R+ +  V++ V+D+NDN P    PP     +LV+  +N   G  VF + A D D   N  V Y I+     +LF+ID ++GN+ ++ K  +++  L   H VLV A+D G P    S V V +
Sbjct:    9 IFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS-AINSKYTLPAAVDPDVGTNGVQNYELIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSF---SNLVSNIARRLFHL--NATTGLITIKEPLDREETP---NHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP--VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCF-TDHEIP-------------FRLRPVFSNQ--FLLETAAYLDYESTKEYAIKLLAAD------AGKPP--LNQSAMLFIKVKDENDNAPVFTQS---FVTV-SIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK-DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNP--GTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKANDLGQPDSLFSVVIVNL 770
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.268e-56
Identity = 231/814 (28.38%), Postives = 374/814 (45.95%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ---KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPTPKSSAVSVQI 3296
            I  VL+   +   G +  ++   EE+  N LIGDL   L+  ++    L+      + +KT D  L+               IDRE++C+   ++  C   + +     +    + +   + DINDN P F    I   + EN+ A  S   L  A DPD   NG   Y+L ++++ IF          D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F++   E +I EN PV   V ++ ATDAD  EN K+++ F   SN    +A   F +   +  G I +K+ LD + TP       +V A D G  P  +R  V + + DVND  P I + YI N    +++  + EN  +N  IA ++V DKD+   G V C+ T+                 +R+     +Q  ++++     D E       K++  D        + P  L   A + + + DENDN P + +S   F +  + P N+   ++L  +  +D D G       ++ P    E +    +G L +V   DRE  +     I A   +G       V++ V I+D+ND +PVF+ + Y F   EN      VG +  TD D      +   I   +  F+I+S++G+IR     DRE++E Y   + A D         R+ +  V++ V+D+NDN P    PP     +LV+  +N   G  VF + A D D   N  V Y I+     +LF+ID ++GN+ ++ K  +++  L   H VLV A+D G P    S V V +
Sbjct:    9 IFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS-AINSKYTLPAAVDPDVGTNGVQNYELIKSQN-IFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSF---SNLVSNIARRLFHL--NATTGLITIKEPLDREETP---NHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP--VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCF-TDHEIP-------------FRLRPVFSNQ--FLLETAAYLDYESTKEYAIKLLAAD------AGKPP--LNQSAMLFIKVKDENDNAPVFTQS---FVTV-SIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK-DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNP--GTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKANDLGQPDSLFSVVIVNL 770
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6V0I7|FAT4_HUMAN (Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 1.074e-55
Identity = 209/664 (31.48%), Postives = 314/664 (47.29%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHV-VVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPII-TVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREE------NDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGR--YNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPS--PLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKD--GFNLFSIDSKSGNLF 3182
            V+ITV D+NDN+P F Q  IE V VVEN  A  S ++  +A DPD   NG + Y L++N   +F+      I+  N   +  L  LD      Y +E+LA D G PQ + ++ + + V D NDN P+F++  YE T+ E+ PV  +  ++ A+D DS  NG++ Y  A      +    + FGI  +   G++Y+K +LD +L    +R+  MV A D    P  +   VT+ + DVND RP+  + NY     + +E     E    +++  VS VDKD GP G V       +FE++Q         L+ ++ +        I N  +FDRE            F +I  D          P  L ++A + V + D NDN P++LK  Y+    E+   N  + +++   +V + + G   Y  +  N  + F + + SG++ L+   D EA  +  + I A V  G    N T ++N+ ILDEND  P F   T   + +EN      V  V ATD DS     + Y I+  +    FSI+  +G I +  KLD E +  Y + I A D          +    V     D NDN P   FPP      I  N PIG  V ++ A DPD   NG +SY II+     N F+ID   G ++
Sbjct:  879 VNITVKDLNDNSPHFLQ-AIESVNVVENWQAGHS-IFQAKAVDPDEGVNGMVLYSLKQNPKNLFA------INEKN-GTISLLGPLDVHAGS-YQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIA------EGNTGDAFGIFPD---GQLYIKSELDRELQ---DRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTF---YFEE-----EQRAGSFVGKVSAVDKDFGPNGEVR-----YSFEMVQ-----PDFELHAISGE--------ITNTHQFDRESLMRRRGTAVFSFTVIATD-------QGIPQPLKDQATVHVYMKDINDNAPKFLKDFYQATISESA-ANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQA-VDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVR----DFNDNPP--SFPPGDIFKSIVENIPIGTSVISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIY 1479

HSP 2 Score: 186.808 bits (473), Expect = 5.512e-46
Identity = 215/813 (26.45%), Postives = 356/813 (43.79%), Query Frame = 3 
Query:  978 FVTTEELHPNSLIGDL--KPYLSSEMLQTLRLSNMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSF-ISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGT--ITYKLQENKDFIFSQFFRLQIS--PDNVPRLMQLFL---LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFEL-IQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDN----PNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG---NRFYHKLMINPSQAFELTESGELFLVLS---FDREAMESNPVRIFASVSDG-----RYNQTVSINVQILDENDLAPVFSL-DTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSP---LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNG-IPTPKSSAVSVQIRLPFENP 3317
            F   EE  P +L+G +  +P  +  + ++  L  +N  T          L    +IDRE + S        ++ L+++   S  P++   V + V D+NDN P F  P I     E++++    + L  A D D   NG    +Y++    +   +  FRL I+  P      + L     LD EV   Y + +   D G P++ G L++ + VQD NDN P+F  + Y+  + E+  V   V+++ A DAD   N  + YR         Q     F +  E+  G I V++ LD +      ++   V A D G      R    I+++DVND  P++   Y          +++ EN+ +   +A ++V D DS P         N N  + I G N++    +      S+   + +IK     DRE        +   DN    P      ++ +     A +V+ ++D ND+PP + +  Y     E  P        +  +  +D D G   N  Y  +  N    F ++E   L    S    DRE + S  V   ++   G      Y Q V   V +LD ND  PVFS  + Y  + VEN+   T +  + ATD D    G + + +         F ++  SG +   + LDREE+ FY++ +LA D  +      ++    ++V++LD+NDN P   F P Q    I  N P G  + T+ A DPDL  NG+V Y I     + F ++++SG   I  + +L   + T+  L +VA+D G + +P  + V++ +    +NP
Sbjct:   49 FQVLEEQPPGTLVGTIQTRPGFTYRLSESHALFAINSSTG--------ALYTTSTIDRESLPSD-------VINLVVL---SSAPTYPTEVRVLVRDLNDNAPVFPDPSIVVTFKEDSSSG-RQVILDTATDSDIGSNGVDHRSYRIIRGNE---AGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRYRL--------QDEGTPFQMDPET--GLITVREPLDFEAR---RQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPAT---SRYASVDENAQVGTVVALLTVTDADS-PAA-------NGNISVQILGGNEQRHFEV----QSSKVPNLSLIKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSV-----ASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGS----YVSGISATDGDSGLNANLRYSIVSGNGLGWFHISEHSGLVTTGSSGGLDRE-LASQIVLNISARDQGVHPKVSYAQLV---VTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS----PPQSSMARINVSLLDINDNSP--VFYPVQYFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSG--VISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNP 790

HSP 3 Score: 164.851 bits (416), Expect = 2.810e-39
Identity = 208/752 (27.66%), Postives = 330/752 (43.88%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQEN-KDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPR---CSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEV--SDKDLGNRFYHKLMI---NPSQAFEL-TESGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN--SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSIN-------SKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            S  L   R +DRE    + SK       L++      + S + ++ITV+D+ND+TPKF++P     + E+     S +    A D D   NG ITY + E+ +D IF  F        N+ RL     LDYEV+++Y++ + A +DG  Q T T+++   + D NDN P+F    Y  ++MEN+PV   V+    TDAD   N ++ Y  A         + +  G  T    G + V + LD +     + ++ +V   D    P     S   V+I ++DVND  P      +T          IPEN+ I+  +      D DSGP   +E       + L+  + +K S+        + D ++ +     E DREE  +    ++  D        +    L++  E+VV++ D NDN P + ++ Y+ +  EN     +      I++V  +D D G     +  I   N +Q F + + +G + +    DRE   +  + + A+         T ++++ +LD ND  PVF L  Y  N  EN  +    +  V A D D      + Y       LF  N       S SG + VT  LDRE KE + + I A D+ +    G  T    V     D+NDN P   F        I  + P G  V  + A D D  +N  +  +II  G + F+I+  +G   I+    L      +  LV+V SD G P P SS+ SV + +
Sbjct: 1793 SGDLIATRRLDRE----RRSK-----YSLLVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPG-SLVAAILATDDDSGVNGEITYIVNEDDEDGIF--FLNPITGVFNLTRL-----LDYEVQQYYILTVRA-EDGGGQFT-TIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYSIA---------SGDSLGQFTVDKNGVLKVLKALDRE---SQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPKLT---------YIPENTPIDTVVFKAQATDPDSGPNSYIE-------YTLLNPLGNKFSIG-------TIDGEVRL---TGELDREEVSNYTLTVVATD--------KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTD------IIQVFAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPRTILQVVARDDDRGSNSKLSYV------LFGGNEDNAFTLSASGELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVD----DVNDNVP--TFASKAYFTTIPEDAPTGTDVLLVNASDADASKNAVI--RIIG-GNSQFTINPSTGQ--IITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTV 2456

HSP 4 Score: 152.14 bits (383), Expect = 2.051e-35
Identity = 195/707 (27.58%), Postives = 306/707 (43.28%), Query Frame = 3 
Query: 1245 ITVNDINDNTP--KFNQ-PEIEHVVVENANARLSD----LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL---LDYEVRKFYMMELLAVDD-GNP------QKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPS--QAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDG----RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLP--SPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            I + D+NDN P  KF   P        + NA++      L + +A+ P    NG I+ ++    +    + F +Q S   VP L  + +   LD E    Y + +   D+ G P       ++    + I V D ND+ P+F + +Y   + E  P    V  I ATD DS  N   N R+++ S N       +F I   SG         LD +L  +I      +SA D G  P+ S   + + ++DVND +P+ +         G + S +        +  +   D D G  G V        F L +   D+ S  L  V+ +        +  I   DREE       ++  D         +P Q ++ A I V + D NDN P +    Y     EN P        +  +  +D DLG     K  I+      F++  +SG +   ++ DRE   +  ++I A+  DG      NQ + + + +LD  D  PVFS   Y F   EN +    VG V A+  D  +   I Y I+      +F+IN  +G +     +DREE+ FY ++++A        GG  TG T V++TV DLNDN P   F    + V +  NW  GH +F  +A DPD   NG V Y + ++  NLF+I+ K+G + ++    +      S  + ++ASD G+P   SS +
Sbjct:  341 IQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLTVTDADSP--AANGNISVQILGGNE---QRHFEVQSS--KVPNLSLIKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLN--ANLRYSIVSGN----GLGWFHISEHSGLVTTGSSGGLDRELASQIV---LNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFS------QPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVR-------FSLQEAETDRRSFRLDPVSGR--------LSTISSLDREEQAFYSLLVLATDL-------GSPPQ-SSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGS----YITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVAT--DGGNLQSPNQAI-VTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMD--LNSNISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKVVA-------SGGTVTGDTMVNITVKDLNDNSP--HFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAG---SYQIEILASDMGVPQLSSSVI 981

HSP 5 Score: 150.214 bits (378), Expect = 7.993e-35
Identity = 183/714 (25.63%), Postives = 303/714 (42.44%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHV-VVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVP-RLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIIT-VNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS----DKDLGNRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISL--PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSV--SYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSS-HLVLVASDNGIPTPKSSAVSVQIRL 3302
            G   K S+  + +T+ D+ND  P F+QPE   V VVENA    ++L +  A D D  +NGT+ + LQE +     + FRL    D V  RL  +  LD E + FY + +LA D G+P ++   +I + + D NDN P+F    Y   I EN P    +  + ATD D   NG V Y  +    ++ Q+          +  G I  +  LD +       +   + A D GN    ++  VTI ++D  D  P+ + V Y         S  + EN ++  ++ +VS    D            N N   +    D++   ++ +N     Q    +      DREE    + K++                +T +  + + + D NDN P +L++       EN       +    I +      D+ +     + L  NP   F + E +G + L+   D  A  S  + I AS +   + + +V + V + D ND +PVF   +Y     E+   ++    V+A+D+DS   G I Y I+       F I    G + + ++LDRE ++ Y + ++A D A E        T  +     D+NDN P   F         +     G  V  + A D D   NG V  S+++++  F L +I  +  N     + SL   + T+     ++A+D GIP P     +V + +
Sbjct:  558 GVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTG-TELLMLRATDGDLGDNGTVRFSLQEAE--TDRRSFRL----DPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQV---------NAQSGVISTRMALDRE---EKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAY---------SFVVFENVALGYHVGSVSASTMD-----------LNSNISYLITTGDQK--GMFAIN-----QVTGQLTTANVIDREEQSFYQLKVVASGG-----------TVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENW------QAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHA-GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGI-FPDGQLYIKSELDRELQDRYVLMVVASDRAVEPLSATVNVTVILE----DVNDNRPL--FNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATDQGIPQPLKDQATVHVYM 1200

HSP 6 Score: 135.191 bits (339), Expect = 2.613e-30
Identity = 193/716 (26.96%), Postives = 302/716 (42.18%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVEN--ANARLSDLYLYEAEDPDRQENGTITYKLQE-NKDFIFSQFFRLQISPDNVPRLMQLFL---LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPR---INRFDFMVSACDNG-NSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSIN-NYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT-ESGELFLVLSFDREAMESNPVRIFASVSDGR--YNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPL---FSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            G  +  S + +++ V+D+NDN+P F+Q   E  + E+   N+R    +  +A D D   NG I Y + E N    F  F      PD      QL++   LD E++  Y++ ++A D      + T+ + + ++D NDN PLF    Y     E       V ++ A D D   NG+V Y F +   + +  A +          G+I    + D +   R      F F V A D G   P   + TV + + D+ND  P    ++          +TI E++ N   +  VS  D D G  G++       ++ +I+G N++    +    D +  Q    +  I + D E        I        Q  +   I L +   + + I DENDN P + KS       EN  R  E    +   +    D  + +Y     N    F ++  +G +FL    D E      + I A    GR   + T+S+ + + D ND  P F       + VEN    T V  V A D D+DI G + Y I    P    F+I+   G I    ++DRE    + + + A D A      RR     V++ V DLNDN P       Q  +  D +  IG  + T+ A DPD   NG + Y+II    + F +D  SG+L   V  +L  +QL   +L++ A+D G P  + S   + I L
Sbjct:  972 GVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRF---FKVQASDKDSGANGEIAYTIAEGNTGDAFGIF------PDG-----QLYIKSELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAIS----------GEITNTHQFDRESLMRRRGTAVFSFTVIATDQGIPQPLKDQATVHVYMKDINDNAPKFLKDFY--------QATISESAANLTQVLRVSASDVDEGNNGLI-------HYSIIKG-NEERQFAI----DSTSGQ----VTLIGKLDYEATPAYSLVI--------QAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENM-RIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLYKLNITAK-DQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKANDQA-VPIETRRYALKNVTILVTDLNDNVPMFI---SQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDTFIVDRYSGDLR--VASALVPSQLI-YNLIVSATDLG-PERRKSTTELTIIL 1621

HSP 7 Score: 134.035 bits (336), Expect = 6.781e-30
Identity = 194/764 (25.39%), Postives = 311/764 (40.71%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRP-----IITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNR---FYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREE------KEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL-FSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYP 3350
            S  L    S+DREE    S      +L L    G   + S   +++++ DINDN+P F   +    + EN     S +    A DPD   NGT+ Y +            R Q++  +   +     LD E +  Y ++++A D GN Q      + I V D  DN P+F +  Y   + EN+ +   V  + A+  D +     N  + + + +Q+ +    F I   +G       Q    ++  R  +  + +    +G +     T V I + D+ND  P     I +VN + N   G            + I     VD D G  G+V  Y   QN +           NL+ +N+K+       I  +   D     + + +I+  D            QL++   + V + D NDN P + +  YE    E+ P N     +   ++ SDKD G      Y     N   AF +   G+L++    DRE  +   + + AS  +    + TV++ V + D ND  P+F+   Y F   E     +FVG V A D+D    G + Y   +  P F +++ SG I  T + DRE          ++  ++A D              TV V + D+NDN P  KF        I  +     +V  + A D D   NG + Y IIK      F+IDS SG + ++ K  L      +  LV+ A D+G   P +S  ++ I +  EN     +N P +P
Sbjct:  638 SGRLSTISSLDREEQAFYS------LLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGG-SYITTVSATDPDLGTNGTVKYSISAGDRS------RFQVNAQS-GVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNS----NISYLITTGDQKGM----FAINQVTG-------QLTTANVIDREEQSFYQLKVVASGGT-VTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAG------------HSIFQAKAVDPDEGVNGMV-LYSLKQNPK-----------NLFAINEKNG-----TISLLGPLDVHAGSY-QIEILASD--------MGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNS----RFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKSELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRESLMRRRGTAVFSFTVIATDQG---IPQPLKDQATVHVYMKDINDNAP--KFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVTLIGK--LDYEATPAYSLVIQAVDSGT-IPLNSTCTLNIDILDEN-----DNTPSFP 1316

HSP 8 Score: 129.028 bits (323), Expect = 2.346e-28
Identity = 185/728 (25.41%), Postives = 302/728 (41.48%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEA--EIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILE---VSDKDLG--NRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSDGRYNQT--VSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI-------SLPSPLFSINSKSGMIRVTTKLDREEKE-FYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYPLD 3356
            +V + + DINDN PKF +   +  + E+A A L+ +    A D D   NG I Y + +  +         Q + D+    + L   LDYE    Y + + AVD G      T  + I + DENDN P F K+     ++EN+ + E V  + ATD+DS +N  + Y     +N+        F I   +G   I++ +KLD +     + +   ++A D G  PR S  +V I + D ND  P            GD   +I EN  I   + +V+  D D+   G +       ++ +IQ         + R N  + D+    I    E DRE  +   F++  K N     +   PI+    A   + +L+ D NDN P ++         +N    D   V   +L     +D D G      ++++   +  F +   SG+L +  +     +  N +     +   R   T  ++I +Q LD     PVF+   Y     E     T V  +EA         P+EY I            LF+I   +G+I+    LDRE+    Y + + AI+ +      +R           D+NDN P   FP     + ++ N   G K+  + A D D   N  V+Y II    + F ID +SG+L    +    + +  S + +LV +D+G+   +SS + + I +   N      + P Y  D
Sbjct: 1195 TVHVYMKDINDNAPKFLKDFYQATISESA-ANLTQVLRVSASDVDEGNNGLIHYSIIKGNE-------ERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNH------GTFSISPNTGS--IFLAKKLDFETQ---SLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFP--------PGDIFKSIVENIPIGTSVISVTAHDPDADINGQL-------SYTIIQ--------QMPRGNHFTIDEVKGTIYTNAEIDREFAN--LFELTVKAN-----DQAVPIETRRYALKNVTILVTDLNDNVPMFIS--------QNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDTFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTELTIILQGLD----GPVFTQPKYITILKEGEPIGTNVISIEAASPRGS-EAPVEYYIVSVRCEEKTVGRLFTIGRHTGIIQTAAILDREQGACLYLVDVYAIEKSTAFPRTQRAEVEITLQ---DINDNPPV--FPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGADDSFRIDPESGDLIATRRL---DRERRSKYSLLVRADDGL---QSSDMRINITVSDVNDHTPKFSRPVYSFD 1849

HSP 9 Score: 127.487 bits (319), Expect = 5.641e-28
Identity = 155/602 (25.75%), Postives = 250/602 (41.53%), Query Frame = 3 
Query: 1119 LKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN--SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQ-GINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFAS--VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKISLP-SPLFSINSKSGMIRVTTKLDREEKEFYAIQI 2903
            LKV +++DRE   S+S  N    +  +     S+  S   VSI + D+NDN P F  P++ ++  EN     + ++  +A DPD   N  I Y L       FS       + D   RL     LD E    Y + ++A D G P  + + ++ + V D NDN P+F +ALY+  I EN      +I++ A D D   NG+V Y     + NQ+      F I  +S  G I V + LD + TP    +   V A D G++PR   +TV+I ++D+NDF P+  ++  + N        +PEN  ++   I  V   D D G         +N     +  G N+  +  L    +    Q +         DRE  +     I   D+            LT    I V++DD NDN P +    Y    +   P +      + ++  SD D       +++   SQ      +G++      DRE  ++  + +  S   S    + + S+ V + D ND  P F    Y  +    +   +FV  V  TD D      + Y +S   S  F I+   G I     L+   +  +++ +
Sbjct: 2000 LKVLKALDRE---SQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPKLTYIP-ENTPID-TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIG-----TIDGEVRLTGE--LDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE------FRI--DSVTGAITVAKPLDREKTP---TYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVN--------VPENLGTLPRTILQVVARDDDRG---------SNSKLSYVLFGGNEDNAFTLSASGELGVTQSL---------DRETKERFVLMITATDS--------GSPALTGTGTINVIVDDVNDNVPTFASKAY----FTTIPEDAPTGTDVLLVNASDADASKNAVIRIIGGNSQFTINPSTGQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHIDPLRGAIMAAGPLNGASEVTFSVHV 2540

HSP 10 Score: 119.398 bits (298), Expect = 1.997e-25
Identity = 190/742 (25.61%), Postives = 310/742 (41.78%), Query Frame = 3 
Query: 1095 YFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFI---SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYEN-RPRNDEKRVKLGILEVSDKDLGNRF---YHKLMINPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQ--ILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLF--IVVKH----SLSENQLTSSHLVLVASDNGIPT 3266
            + L  S  L V +S+DRE      +K       L++    S  P+     ++++ V+D+NDN P F        + E+A    +D+ L  A D D  +N  I          I     +  I+P +  +++   LLD E +  Y + ++  D G+P+  + +  + + V D NDN P F+   Y   I         V  +  TDAD   N +++Y  +L   N ++   +         +G I     L+       +   F V   D G+ P+   TTVT+R ++  DF P +           +++   PEN   + +  V+ +   S  G  +  Y+ + N             N +++     DQ    +   +  D E+       I  +D          P     + +I VL  D NDN P + + P+  +  EN  PR      K+  +   DKD G      Y  +  N   +F +  + GE+  V   DRE + S+ V    S   G  +Q+ S+ V   ILDEND AP FS   +  +  ENS     V  V  +D+D  I     Y I   S  F+IN  +G I ++  L+RE+ + Y I++ A D+         T +T V++ V D+NDN P  +F      +       IG KV  + A DPD   NG V Y  IK     F I++ +G +F   ++K+      S   +     ++ +SD G P+
Sbjct: 2308 FTLSASGELGVTQSLDRE------TKER---FVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTG-TDVLLVNASDADASKNAVIR---------IIGGNSQFTINP-STGQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHY--SLSGRNSEKFHIDPL-------RGAIMAAGPLN-----GASEVTFSVHVKDGGSFPKTDSTTVTVRFVNKADF-PKVRAK--------EQTFMFPENQPVSSL--VTTITGSSLRGEPMSYYIASGNLG-----------NTFQI-----DQLTGQVSISQPLDFEKIQKYVVWIEARD------GGFPPFSSYEKLDITVL--DVNDNAPIFKEDPFISEILENLSPR------KILTVSAMDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKV-SHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFS-QIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHDSG-------WTVSTDVTIFVTDINDNAP--RFSRTSYYLDCPELTEIGSKVTQVFATDPDEGSNGQVFY-FIKSQSEYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSSDRGKPS 2962

HSP 11 Score: 117.472 bits (293), Expect = 6.448e-25
Identity = 169/689 (24.53%), Postives = 290/689 (42.09%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRF---ALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIIT-VNYITNNGHGDESSTIPE-NSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQD---QQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMI---NPSQAFEL-TESGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPS--PLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVA 3245
            S+  + ITV D+NDN P F +      ++EN + R   +    A D D   NG + Y++           F +  +   +  +     LD E    Y++ + + D G+P ++ ++K+ I + DENDN P F + ++   + EN P+   V  +  +D D   N    Y     +LP                    G I + + L+ + T   +R+   VSA D+G +     T VTI + D+ND  P  +  +Y  +          PE   I + +  V   D D G  G V  ++ +Q+               +R+N  + +   +QI   +N+  F     +   F +   D        +    L +E  + + I D NDN P++LKS Y F       +   K ++  +  + DKD G     +  I   N    F+L  ++G + +  S   +  ++  + + A    +   +   ++++ + +EN   P FS         E+ S  + V  V A D+D+ + G I+Y IS  +   +F+INS +G++ +   LD E  + + + I AID         RTG  +V+V V+D+NDN P   F        +  N P G  V  + A D D   N  ++Y +     +LF ID  +G   I  +  L      S HL + A
Sbjct: 2651 SYEKLDITVLDVNDNAPIFKEDPFISEILENLSPR--KILTVSAMDKDSGPNGQLDYEIVNGN---MENSFSINHATGEIRSVRP---LDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDASLP-------------FTINPSTGDIVISRPLNREDT---DRYRIRVSAHDSGWT---VSTDVTIFVTDINDNAPRFSRTSYYLD---------CPELTEIGSKVTQVFATDPDEGSNGQVFYFIKSQS-------------EYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSSD--------RGKPSLISETTVTINIVDSNDNAPQFLKSKY-FTPVTKNVKVGTKLIR--VTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFFITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQKHEMTISAIDGG----WVARTGYCSVTVNVIDVNDNSP--VFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTG--VITTQGFLDFETKQSYHLTVKA 3270

HSP 12 Score: 110.923 bits (276), Expect = 7.871e-23
Identity = 171/673 (25.41%), Postives = 279/673 (41.46%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRL-QISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIK---IRVQDENDNLPLF--EKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITV-NYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKISL--PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK-DGFNLFSIDSKSGNLFIV 3188
            GR  + S +SV I V D NDN P F   +I   +VEN     S + +  A DPD   NG ++Y        I  Q  R    + D V   +     +D E    + + + A D   P +T    +K   I V D NDN+P+F  + AL  +    +  +   +  I+A D D   NG++ Y       +           + +   G + V       L P    ++ +VSA D G   R S T +TI +  ++   P+ T   YIT    G+    I  N I+  I A S      G    VE Y+ +   E      +K    L+ +      +   II+     DRE+   +       D   ++++   P   T  AE+ + + D NDNPP +     +    EN   +  K ++L  ++ +D+       + ++     +F +  ESG+L      DRE    +   +     DG  +  + IN+ + D ND  P FS   Y F+  E++   + V  + ATD DS + G I Y ++      +F +N  +G+  +T  LD E +++Y + + A D         +  T  V   +LD+NDN P          ++   N P+G  V      D D   N  ++Y I   D    F++D K+G L ++
Sbjct: 1396 GRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISV-TAHDPDADINGQLSYT-------IIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFISQNALAAD---PSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDT---------FIVDRYSGDLRVASA----LVPSQLIYNLIVSATDLGPERRKSTTELTIILQGLDG--PVFTQPKYITILKEGEP---IGTNVIS--IEAAS----PRGSEAPVEYYIVSVRCE------EKTVGRLFTIG-----RHTGIIQTAAILDREQGACLYL----VDVYAIEKSTAFP--RTQRAEVEITLQDINDNPPVFPTDMLDLTVEENI-GDGSKIMQLTAMD-ADEGANALVTYTIISGADDSFRIDPESGDLIATRRLDRE--RRSKYSLLVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGVNGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTVRAEDGGG------QFTTIRVYFNILDVNDNPPIFSLNSYSTSLM--ENLPVGSTVLVFNVTDADDGINSQLTYSIASGDSLGQFTVD-KNGVLKVL 2003

HSP 13 Score: 109.383 bits (272), Expect = 2.295e-22
Identity = 147/575 (25.57%), Postives = 255/575 (44.35%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQE-NKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKD---LGNRF-YHKLMINPSQAFELT-ESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT--VSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQD-SDIYGPIEYKISLPSPL---FSINSKSGMIRVTTKLDREEKEFYAIQILAIDNA 2921
            +V ITV + N +TP+F+Q  +   + E +++  S +    A D D   NG I Y +   N++ IF+      I       L     LDYE+ + + M + A+D G   +TG   + + V D NDN P+F    Y  T++EN P    VI + ATDADS  N  + Y         Q    + F  V +   G I  +  LD +       +   V A +  +  RCS  TV I++   N++ P     +++   + + S   P+ +I   +  V   D+D G  G V          LI G + K+    +++N K+   QIY+   +   DRE+ + +  K++ K+  +++  +       +E  + V + D ND PP +  + Y  +  E  P        +  +   D D     +RF Y     N + AF +  ++G++ +    DRE +    + + A V  G  + T   S+ V + D ND  P+ ++       +EN    T V  +++TD D     GP  Y +    P    FS+ S +G++  T ++DRE+   + + ++  D+ 
Sbjct: 3074 TVHITVTEENYHTPEFSQSHMSATIPE-SHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGI-------LTLAKALDYELCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTV-------QSSDSDLF--VIDPNTGVITTQGFLDFETK---QSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVP----RFVSKLYYFEISEAAPKGTI---VGEVFASDRDLGTDGEVH--------YLIFGNSRKKG---FQINKKT--GQIYVSGIL---DREKEERVSLKVLAKNFGSIRGAD------IDEVTVNVTVLDAND-PPIFTLNIYSVQISEGVPIG----THVTFVSAFDSDSIPSWSRFSYFIGSGNENGAFSINPQTGQITVTAELDRETLPIYNLSVLA-VDSGTPSATGSASLLVTLEDINDNGPMLTVS--EGEVMENKRPGTLVMTLQSTDPDLPPNQGPFTYYLLSTGPATSYFSL-STAGVLSTTREIDREQIADFYLSVVTKDSG 3590

HSP 14 Score: 105.531 bits (262), Expect = 3.050e-21
Identity = 187/722 (25.90%), Postives = 290/722 (40.17%), Query Frame = 3 
Query: 1119 LKVKRSIDREEVCSK--SSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENG-TITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRK--------FYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDI-DLTP----RINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRP-IITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQN----FELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMI---NPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSDGRYNQT--VSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKI-SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII----KDGFNLFSIDSKSGNLFI 3185
            ++  R +DRE+V     + K++D         G   + + + V I + D NDN P+F+Q                   ++ A  P+    G T+T     ++D   +   R  I   ++P  +     D  + +         Y + + A D G    T +  + I V D NDN P F +  Y     E   +  KV ++ ATD D   NG+V Y     S         YF I   +  G+I+ KQ L   ++T      INR  F+V++ D G     S TTVTI I+D ND  P  +   Y T      +  T         I   ++ DKD G    VE +++N N    F+L    ND   +++        +Q  +I    K+               K NP           L+++A + + + +EN + PE+ +S       E+       R     +   D+D       K  I   N    F +  S G L L  + D E  + + + I A +  G   +T   S+ V ++D ND +PVF  D Y    +EN+ S T V H+ ATD DS     I Y + S  S LF I+  +G+I     LD E K+ Y + + A +  +E      T    +  T    N+  P  +F        I    P G  V  + A D DL  +G V Y I     K GF    I+ K+G +++
Sbjct: 2725 IRSVRPLDREKVSHYVLTIKSSD--------KGSPSQSTSVKVMINILDENDNAPRFSQ-------------------IFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHDSG---WTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGSKVTQVFATDPDEGSNGQVFYFIKSQS--------EYFRI--NATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGT-------KLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKL---DNDTGWISVASSLISDLNQNFFITVTAKD---------------KGNP----------PLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSIGSIVRT----VSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQKHEMTISA-IDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGT----NEYVP--RFVSKLYYFEISEAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQ---INKKTGQIYV 3357

HSP 15 Score: 97.8265 bits (242), Expect = 5.800e-19
Identity = 142/629 (22.58%), Postives = 270/629 (42.93%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNR---FYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTV--------------SINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEAT---DQDSDIYGPIEYKISLPSPL--FSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            LD+E  + Y++ + A D G P  +   K+ I V D NDN P+F++  +   I+EN+  + K++ + A D DS  NG+++Y   +  N +   + N+         G+I   + LD +   +++ +   + + D G+  + +   V I I+D ND  P  +  +         S+ +PENS   Y +  V+  D+D G   I    + + +               + +N  + D  I      +  +RE+ D  + ++   D+             T   ++ + + D NDN P + ++ Y    Y + P   E   K+  +  +D D G+    FY   + + S+ F +   +GE+     F+++ ++   V  F++V+  R++  V              ++ + I+D ND AP F L +  F  V  +       +  T   D+D  +   +EY IS  + L  F +++ +G I V + L  +  + + I + A D  N     + T   TV+       +NY   +F        I  +  IG  V T+ A D D   NG + Y I       +F+I+S +G   I+      + +L   H + +++ +G    ++   SV + +
Sbjct: 2627 LDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPR-KILTVSAMDKDSGPNGQLDYEI-VNGNMENSFSINH-------ATGEIRSVRPLDRE---KVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIF---------SAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDASLP-------------FTINPSTGDIVIS-----RPLNREDTDRYRIRVSAHDS-----------GWTVSTDVTIFVTDINDNAPRFSRTSY----YLDCPELTEIGSKVTQVFATDPDEGSNGQVFY--FIKSQSEYFRINATTGEI-----FNKQILKYQNVTGFSNVNINRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQF-LKSKYFTPVTKNVKVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFFITVTAKDKGNPPLSSQATVHITVT------EENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTG---ILTLAKALDYELCQKHEMTISAIDGGWVARTGYCSVTVNV 3184
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6X862|PC11X_GORGO (Protocadherin-11 X-linked OS=Gorilla gorilla gorilla OX=9595 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.903e-55
Identity = 232/818 (28.36%), Postives = 377/818 (46.09%), Query Frame = 3 
Query:  921 IVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSN-----MNFKTSDYFLLH-----SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQI--SP--DNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT---ESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ---KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV-ASDNGIPTPKSSAVSVQI 3296
            I  VL+   +   G +  ++   EE+  N LIGDL   L+  ++    L+      + +KT D  L+               IDRE++C+   ++  C   + +     +    + +   + DINDN P F    I   + EN+ A  S   L  A DPD   NG   Y+L ++++      F L +  +P  D +P+L+    LD E +  Y+M++   D G PQ++ T  +++ V D NDN P+F++   E +I EN PV   V ++ ATDAD  EN K+++ F   SN    +A   F +   +  G I +K+ LD + TP       +V A D G  P  +R  V + + DVND  P I + YI N    +++  + EN  +N  IA ++V DKD+   G V C+ T+                 +R+     +Q  ++++     D E       K++  D        + P  L   A + + + DENDN P + +S   F +  + P N+   ++L  +  +D D G       ++ P    E +    +G L +V   DRE  +     I A   +G       V++ V I+D+ND +PVF+ + Y F   EN      VG +  TD D      +   I   +  F+I+S++G+IR     DRE++E Y   + A D         R+ +  V++ V+D+NDN P    PP     +LV+  +N   G  VF + A D D   N  V Y I+     +LF+ID ++GN+ ++ K  +++  L   H VLV A+D G P    S V V +
Sbjct:    9 IFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENS-AINSKYTLPAAVDPDVGINGVQNYELIKSQNM-----FGLDVIETPEGDKMPQLIVQKELDREKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSF---SNLVSNIARRLFHL--NATTGLITIKEPLDREETP---NHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPSIDIRYIVNP--VNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCF-TDHEIP-------------FRLRPVFSNQ--FLLETAAYLDYESTKEYAIKLLAAD------AGKPP--LNQSAMLFIKVKDENDNAPVFTQS---FVTV-SIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAK-DNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGR----VSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNP--GTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGL---HRVLVKANDLGQPDSLFSVVIVNL 770
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: A0A158QGR4 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS601 PE=4 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.280e-75
Identity = 259/874 (29.63%), Postives = 392/874 (44.85%), Query Frame = 3 
Query: 1146 EEVCSKSSKNNDCILRLILVYGR------SKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENAN-ARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQF-------FRLQISPDNVP-RLMQLFLLDYEVRKFYMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVT-ESGKGKIYVKQKLDID-------------LTPRINR-FDFMVSACDNGNSPR-CSRTTVTIRIIDVNDFRPIITVNYITNNGHGDES-------------STIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQ-GINDKESLNLYRVND---KSQDQQIYI-IKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPI---------------------------------QLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYEN------RPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAM--------------ESNPVRIFAS----VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF---STFVGHVEATDQDSDIYGPIEYKI--------------SL---PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXL--------DLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSY------KIIKDGFN---------LFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFEN 3314
            E++ +  + +N C L L +VY        +K P  ++V++ + DIND+ P F Q  I   + E  +    + + L  A DPD   NGT++Y ++       SQ        FRL+   D  P RL  +  LDYE  K Y   L   D G P   +  L+I I V DENDN+P+F ++ Y   I E++P    ++++ A D DS +NG+V + F+ P   + +L   YFG+ T   G  K++++Q  D+D             ++ R +R F   V A D+G+  R  S  TV +R++DVND  P I V ++T+ G   +               T+ EN   + IA V+V D DSGP G V C   N  F +I    N  ES +    N+   +S +++IY  +   K FDRE    + F+IIC D  N+ +N Q                                    QLT  + + V I DEND  PE+ ++ Y F   EN      +P +  +   +G ++  DKDL     + L+ NP  AF + +++G LF++  FDREA                +N   + AS    VSDG++     I V I D ND  P+F    Y F   EN        +G V+A D D  + G I Y I              SL   P+  F I+  +G+I     LDRE+   +   +LAID ++     +  G   +  T          D NDN P I FP     + ++   P GH++FT+ A DPD  ENG+V Y       +I D  N         +FSID ++G + +  K     N  T   L + A D G    K+++++  I +  +N
Sbjct:  120 EKIHAPEAADNPCTLTLRVVYTPEPSGEITKDPILLTVNVIITDINDHIPMFPQSRINLELGEILSIPGETTITLPTASDPDAGSNGTLSYWIEHGLLSHGSQITNSSAFPFRLEGLADGNPLRLRLIQPLDYEKLKSYEFILCVEDRGTPNSLSSRLRIHIDVLDENDNIPIFSQSKYFIIINESLPRGSVLLDLRAQDHDSGQNGQVTFEFSPPMTEESKLVQQYFGVRTITPGFAKLFIRQSPDLDTGIENNPLGTSSEISVRRSRDFTLRVIATDSGSPKRHSSEATVVVRVLDVNDMTPKIAVTFLTSQGSQQQGNMYYRGPTPQRSHGTVMENVDRSLIAFVTVRDLDSGPWGQVTCRTDNDAFRMIPISGNAPESDSFEGQNEVEPRSANEEIYFKLMTQKPFDRETVQQVTFRIICVD--NVYKNGQTQTFVQDLSPSNFGALPSSQTPGSGKQFTIVTERAEQLTGVSLVSVRILDENDCAPEFTQALYTFSEEENIPDYTKQPSSKMEGKAIGKIQAKDKDLDPVLTYSLLSNPQDAFSIDSKTGTLFIIRPFDREAFLTSTYEGIEVKRSQATNESVVMASFRAQVSDGKHTAETKIQVTITDVNDCPPIFEKTNYEFFVEENRRPQNGNPIGVVKAHDSDVGLNGKIVYSIQPLTDNDFNESVSYSLDYNPNRHFKIDPNTGVIHTLRPLDREQYIHHVFHVLAIDTSDSSAYQQSQGGKKIQFTATATVTVIVNDENDNSPIITFPASHTTLRVEVGAPAGHQIFTVTATDPDAAENGTVRYFLRQSTPLISDTRNTEEGNAKGAIFSIDEQTGIVLLTEKLL---NAQTKYLLTIGAHDLGSVVQKNTSIAAIIHVVGKN 988
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: A0A158R6F0 (Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS115 PE=4 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 4.904e-75
Identity = 280/999 (28.03%), Postives = 441/999 (44.14%), Query Frame = 3 
Query:  909 LKMIIVFV----LMVLNIRGFGCKNVHFVTTEELHPNSLIGDLK----------PYLSSEMLQTLRLSNMNFKTSDYFLLHSS--YLKVKRSIDREEVCSKSSK----------------------------NNDCILRLILVY------GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVE-NANARLSDLYLYEAEDPDRQENGTITYKL-----QENKDFIFSQFF--RLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVT-ESGKGKIYVKQKLDID----------LTPRINR---FDFMVSACDNGNSPR--CSRTTVTIRIIDVNDFRPIITVNYITNNGHGDES-----STIP--------ENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQ-GINDKESLNL---YRVNDKSQDQQI-YIIKNIKEFDREENDHIKFKIICKDN----------------PNLQRNNQNPI--------------QLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYEN------RPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNP------------------VRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGH----VEATDQDSDIYGPIEYKISL-----------------PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXL--------DLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK----------DGFN----LFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQS 3329
            LK++I F     L++++ +  G +++ +V  EE+   + +G+L           P    +    L ++N        F + +S  YL V   +DRE +C  +S                             +N CIL L +VY      G  K P  ++V++ V D+ND+ P F Q  I   + E +A    + + L  A DPD   NGT++Y L     Q  +  + S  F  RL+   D  P  ++L   LDYE  K Y + L   D G P   +  L+I I V DENDN+P F +  Y   I E++P    ++++ A D DS +NG+V++    P   + ++   YF + T   G  K++++Q  D+D          L   I R   F   V A DNG SPR   S  TVT+R++DVND  P I+VN++ + G   +       T+P        EN   + IA VSV D DSGP G V C   N+ F+LI  G N  E  +      +  +S ++++ + +   K FDREE   + F+I+C D+                P+L   + N +              QLT  A + + I DEND  PE+ ++ Y F   EN      +P    +   +G+++  D+DL     + L+ NP  AF + ++SG L++V  FDREA  ++                   + + A VSDG++     I V I D ND  P+F   TY F  VE ++    GH    V+A D D  + G I Y++                   P   F I+  +G I     LDRE+   +   ++AID ++ +   +         T          D NDN P I FP     + ++   P G ++FT+ + DPD  ENG+V Y + +          D  N    +FSID ++G   +++   L  N  T   L + A D G    ++++++  I +  +N  E S
Sbjct:   21 LKLVIPFFTLAPLLIVSTKTNGLQHLTYVIQEEVPRGTKVGNLAEDVRQIFGTYPTHGEKSAVNLMITNWQDIGPQNFAIDTSNGYLIVTSKLDREGLCPDNSGPGLARFPYPVENGRDHPMPEKIHTPEAPDNPCILTLRVVYTPEQNEGGLKDPILLTVNVIVADVNDHVPAFPQTRINLELGEISAVPGETTINLPTASDPDAGSNGTLSYWLEPVLPQHRRQHLNSTTFPFRLEGLVDGNPLRLRLNQPLDYERLKSYEVLLCVEDHGTPNPLSSRLRIHIEVLDENDNIPTFTRPNYFIIINESLPRGSVLLDLHAHDQDSGQNGQVSFELPTPMTEESKIVQQYFDVRTITPGYAKLFIRQSPDLDTGIEAQSSATLGTCIRRSRDFILRVIATDNG-SPRRHTSEATVTVRVLDVNDITPKISVNFLASRGSHYQGNLLFRGTLPQKAHGVLMENVERSVIAFVSVRDLDSGPWGQVTCRTDNEAFKLIPIGENSPEVDSFEEHSEMEPRSANKELSFKLMTQKPFDREEIQQVPFRIVCIDSVYKTGQTQTFFQDLSPPSLAAPSSNDVNGGRQLTIVTDRARQLTAVALVSIRILDENDCAPEFSQTIYTFSEEENVPDLTSQPSTKVEGKPVGVIQARDRDLDPVLTYTLLSNPQDAFRIDSKSGTLYIVRPFDREAFLTSTYEGIEVKQNLATNESIVVIHLSAQVSDGKHTAEAEIQVTITDVNDCPPIFEKTTYEF-FVEENYRPLNGHPIGTVKAHDSDVGLNGKIIYRLQPITDHGLANITTYPRDYNPVRHFKIDPNTGSIHALRPLDREQYIHHIFHVVAIDTSDGQLYHQTINGKKTQFTATTTVTVIVNDENDNAPTITFPASHTTLRVEVGAPAGQQIFTVTSIDPDAGENGTVRYSLRQSTPLVAEPRVDEANAKGAVFSIDEQTG--IVLLTEKLPSNP-TKYLLTIEAHDLGSVVQRNTSIAAIIHVVAKNQLEAS 1014
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: A0A4E0S127 (Protocadherin-11 Y-linked OS=Fasciola hepatica OX=6192 GN=D915_005120 PE=4 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 4.599e-74
Identity = 243/813 (29.89%), Postives = 374/813 (46.00%), Query Frame = 3 
Query: 1224 PSFISVSITVNDINDNTPKFNQPEIEHVVVE-NANARLSDLYLYEAEDPDRQENGTITY----------KLQENKDFIFSQFFRLQISPDNVP--------RLMQLFLLDYEVRKFYMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTES-GKGKIYVKQKLDIDLTPRIN---------------------RFDFMVSACDNGNSPR--CSRTTVTIRIIDVNDFRPIITVNYITNNGHGDES-----------------STIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFEL--IQGINDKESLNLYR----------VNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNP---------------------NLQRNNQNPI----QLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYE--------NRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAM----------ESNPVR----------IFASV--SDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS---FSTFVGHVEATDQDSDIYGPIEYKI-----SLP------------------SPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDN------------------ANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF 3143
            P  I+V I + DIND+ P F Q  +   + E +A    + + L  A DPD  ENGTI Y           L+ + D + S+    +++  N+P        RL+    LD+E ++ Y + + A D G PQ  TG L + + V+DEND++P F ++ Y   I E++     ++E+ A+DADS  NG++ +  A P+N+Q++LA  +FGI T S  +  IYV Q  D+D TP+                       +F F V   DNG  PR   SRT VTI ++DVND  P I V+Y+  +  GD                     + ENS   +IA V+V D DSG  G V CY  N  FEL  +  +    S+++ +          + D++  +  + +  +K FDRE+ + I F I+C DNP                      +   + NPI    QLT  A + +L+ DENDN P +  + Y F   E        N     + ++ +G +  SD D  +   + L  +    F + +E+G+++ +  FDRE +          +S  +R          +  SV  +DG +N T  + + I D ND  PVF+   Y F   EN     S  +G VEA D D+D+   I Y+I      +P                  + LF+I++ SG + +  KLDRE++  +   +LAIDN                  +  +     T T TV+V V D+NDN P I +PPP  ++ +DS  P GH +FT+ A DPD  +NG+V + +    F
Sbjct:  212 PDLITVRIRILDINDHKPVFQQSRVSSELGELSAIPEKTTIDLPTAFDPDAGENGTIGYWVVDRTAGSTSLERSFDSVSSKASESELAQTNIPFRLVGDPLRLVLTRNLDWESKREYDLLVYAKDYGRPQSLTGQLSVHVTVRDENDHVPQFGQSSYTAVINESVLRGTIILELTASDADSTTNGQLTFGLAPPTNSQERLAVQHFGIRTISPTQAAIYVIQTPDVDSTPKTTFSDRNLATSSGLTRVSEKLGKQFTFHVIVRDNGY-PRQLSSRTEVTILVLDVNDMAPNIFVSYLNPSQSGDRQLSRLDFGRSPTPGERSYGQVKENSDRAFIAFVTVQDFDSGVWGQVRCYTNNDAFELMPVNEVTPGASISVGQFVGSPHQSTEITDRATGEIGFKLLAVKPFDREKTEQISFHIVCVDNPQHTGSSLVNFANAVSSYYTSSQVGYASNNPIAGTVQLTGTALVRILVTDENDNEPVFSHAQYTFSIDEADGSVGRGNVLLATDSQLFVGRVSASDHDSTSHVVYSLPEDLLTLFRIESETGKIYTLHQFDREEIWRKVKQGEYPQSESLRAEVEHDKLVYLHFSVLCTDGLHNSTTKVRLLIRDVNDNPPVFTKSQYEFVVAENEQPIQSGSIGTVEAQDADADVNAQIVYQIYDATDQIPFTGKSAANQSTRTMRLSTNNLFTISAISGQLHLIRKLDREKQSHHIFYVLAIDNPGDGHVDRTWPTGNSPMDSKTQYRKSHTSTATVTVIVADVNDNAPTITYPPPHGVINVDSGAPAGHNLFTVVAHDPDAGDNGTVRFTLSTANF 1023

HSP 2 Score: 63.5438 bits (153), Expect = 5.117e-6
Identity = 94/358 (26.26%), Postives = 143/358 (39.94%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVV------VENANARL---SDLYLYEAEDPDRQENGTITYKLQEN------------KDFIFSQFFRLQI----SPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMEN-IPVKEKVIEIV-ATDADSDENGKVNYRF--------------ALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDN------------GNSPRCSRT----------TVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFE 2123
            V I V D NDN P F+  +    +      V   N  L   S L++      D      + Y L E+            K +   QF R +I         P+   L       +  Y+   +   DG      T K+++ ++D NDN P+F K+ YE  + EN  P++   I  V A DAD+D N ++ Y+               A  S    +L+ N    ++ +  G++++ +KLD +   + +   F V A DN            GNSP  S+T          TVT+ + DVND  P IT  Y   +G  +  S  P     + +  V   D D+G  G V   L+  NFE
Sbjct:  678 VRILVTDENDNEPVFSHAQYTFSIDEADGSVGRGNVLLATDSQLFVGRVSASDHDSTSHVVYSLPEDLLTLFRIESETGKIYTLHQFDREEIWRKVKQGEYPQSESLRAEVEHDKLVYLHFSVLCTDG--LHNSTTKVRLLIRDVNDNPPVFTKSQYEFVVAENEQPIQSGSIGTVEAQDADADVNAQIVYQIYDATDQIPFTGKSAANQSTRTMRLSTNNLFTIS-AISGQLHLIRKLDRE---KQSHHIFYVLAIDNPGDGHVDRTWPTGNSPMDSKTQYRKSHTSTATVTVIVADVNDNAPTIT--YPPPHGVINVDSGAPA---GHNLFTVVAHDPDAGDNGTVRFTLSTANFE 1024
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: A0A158REL5 (Uncharacterized protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS7532 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.378e-72
Identity = 248/829 (29.92%), Postives = 371/829 (44.75%), Query Frame = 3 
Query: 1146 EEVCSKSSKNNDCILRLILVYGRS------KKPSFISVSITVNDINDNTPKFNQPEIEHVVVE-NANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRL-----MQLFL---LDYEVRKFYMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTES-GKGKIYVKQKLDID--LTP-----------RINRFDFMVSACDNGNSPR-CSRTTVTIRIIDVNDFRPIITVNYITNNGHGDES-----STIP--------ENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQ-GINDKESLNLYRVND---KSQDQQI-YIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPI------------------------------QLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPR-NDEKRVKLGILEVS-----DKDLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNP------------------VRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFST---FVGHVEATDQDSDIYGPIEYKISL-----------------PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXL--------DLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYK------IIKDGF--------NLFSIDSKSGNLFIVVK 3194
            E++ S  + +N C L L +VY         K P  ++VS+ V DIND+ P F Q  +   + E +A    + + L  A DPD   NGT++Y L+  +     Q     I P N+  L     ++L L   LDYE  +FY + L   D G P   +  L++ I V DENDN+P F K  Y   I E++P    ++++ A D DS +NG+V++    P   + ++   YF + T + G  K++++Q  D+D  + P           R   F F V A DNG+S R  S  TVT+R++DVND  P I++N++TN G   +       T+P        EN   + IA VSV D DSGP G V C   N+ F+LI  G N+ E  +    N+   +S ++++ + +   K FDREE   + F+IIC D        Q  +                              QLT  + + V I D ND  PE+ +S Y F   EN P   ++   KLG   +      D+DL     + L+ NP  AF + + SG L++V  FDREA  ++                   V + A VSDG++     + V I D ND  P+F   TY F   EN        +G V A D D  + G I Y++                   P+  F I+  +G I     LDRE+   +   ++AID ++ +   +         T          D NDN P I FP     + ++   P G ++FT+ A DPD  ENG+V Y       I+ D           +FSID ++G + +  K
Sbjct:  128 EKIHSPEASDNPCTLTLRVVYTPEQNKDDLKDPVLLTVSVIVADINDHVPIFPQTRVNVELGELSAVPGETTINLPTASDPDAGPNGTLSYWLEPVRPQHGRQNLNSTIFPFNLEGLVDGNPLRLRLNQPLDYENLRFYEVMLCVEDHGTPNPLSSRLRVHIDVIDENDNIPTFTKQNYFRIINESLPPGSVLLDLYAQDLDSGQNGQVSFELPAPMTEESKMVQQYFDVRTVTPGYAKLFIRQSPDLDTQIEPQSSAALDVCIRRSRDFTFRVIATDNGSSRRHTSEATVTVRVLDVNDMTPKISINFLTNQGPQYQGNVLFRGTLPQKTHGVVMENVERSVIAFVSVRDLDSGPWGQVSCRTDNEAFKLILIGENNVEMNSFEEHNEDEPRSANKELSFKLMTQKPFDREEIQQVPFRIICIDGVYKTGQTQTFVQDLSPPSFVVPHSGIANEGKELTIVTERARQLTAVSLVSVRILDANDCAPEFSQSIYTFSEEENVPDFTNQPSTKLGGKPIGSIVARDRDLDPVLTYALLSNPQDAFRIDSNSGTLYIVRPFDREAFLTSTYEGIEVKRSKSTNESTVVVHLQAQVSDGKHTAHTEVQVTIADVNDCPPIFEKTTYEFFVEENRRPLNIHPIGTVRAHDSDLGLNGKIIYRLQPINDHGFPNASTYLRDYNPARHFKIDPNTGSIHALRPLDREQHIQHIFHVVAIDTSDGQLYQQTINGKKTQFTATTTVTIIVNDENDNAPTITFPASHTTLRVEVGAPAGQQIFTVTATDPDAGENGTVRYSLRQSTPIVMDARVDEASADDAIFSIDEQAGIVLLAEK 956
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: A0A267FFK4 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig004164g1 PE=4 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 3.449e-71
Identity = 244/839 (29.08%), Postives = 387/839 (46.13%), Query Frame = 3 
Query: 1005 NSLIGDLKPYLSSEMLQTLRLSNMNFK----TSDYFLLHSSYLKVKRSIDREEVCSKSSK-----------NNDCILRLILVY----GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD-------LYLYEAEDPDRQENGTITYKL------QENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESST--IPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQ-GINDKESLNLYRVND---KSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEY-LKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGN--RFYHKLMINPSQAFEL-TESGELFLVLSFDRE--AMESNPVRIFASVSDGRYNQT-----VSINVQILDENDLAPVFSLDT--------------YRFNCVENSF--------STFVGHVEATDQDSDIYGPIEYKISL------PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNAN-XXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ-KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKD------GFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPT 3266
             + + DL+  L  +      LS +N K    +S      + YL  +R+IDR+++C   S            +  C ++L L Y    G S++ S + + +T  D NDN P F Q      V E     +           +++A DPD+  NG+I Y+L          D      FRL  S  N   L+    LD E +  Y M LLA+D G P  TGTL+I + +QD ND  P+F +  Y   + E+  +  +V  + ATD D+  NG V+Y     S+   Q     F I +  G+G + ++ KLD +    I  +   + A D G  P+ S   +T+ + DVND +P I + Y+  +      S   + EN+ +  +A   V D+DSG GG V C   N++F L+   ++D               + +++ ++I++    DRE +D ++F I+C D       +  P++LT  A + + + D NDNPP +  +S Y+F+  EN P     R  +GI+  SDKD G   R  + +  +PS AF++   +G+LF V   DRE  A E  P ++   VS    N +       + V +LD ND  P F  +               Y F+  E +         ST VG V A  +D D  G IEY +         +  F ++  +G +R   +LDRE +  Y   + A D+        + TG+ TV+V VLD+ND  P+   P    + V +  N   G+ V T++A D DL +NG V+Y I+ D      G  LF +D ++G LF+    +  + +     L++ A+D G P+
Sbjct:   44 GAWLADLRRVLRLDAASAATLSILNPKHDVVSSLAINATAGYLFAQRAIDRDDLCRGDSSAGRACCQPDATDAPCEVQLQLSYSSGNGGSRQLSALRLRLT--DANDNAPTFKQKSTTLRVAEGPLPSVGQPTSISGAGGVFQASDPDQGANGSIVYRLVPVDPATGEVDETTLMPFRLDQSDRNRLTLLVTSELDREKQPAYKMRLLAIDGGRPALTGTLRITVEIQDINDESPVFNQIEYSARLSEDAAIGTEVARVRATDNDAGPNGDVHYSL---SHGSAQ-----FIIRSHDGEGIVTLRSKLDAETLTHIVVY---IVAKDRGYPPKTSEAKLTVTVDDVNDEKPQIEIFYLNPDSTAPRGSRGLLNENANSENVAKAEVTDRDSGSGGRVSCDADNESFTLVPLHLSDAAGSASTSSRATSVGAVNRREFLIRSRDPLDREASDSLQFNIVCSD-------DGRPVRLTGSAAVRLRLLDVNDNPPVFDRRSGYDFQLLENEPSRRGGRQLVGIVTASDKDEGENARLVYSIEQDPSGAFQIDNATGQLFAVHPLDREKLAAERQPAQVLLRVSAADSNPSHPRAVTDVRVIVLDRNDCPPRFVTNNRRPEGVVGISGGADYEFSVEETAGSGANGGPSSTVVGAVRA--EDDDEPGRIEYAMETTGLDPDTANSFRVDPNTGQVRAIRQLDREARAIYVFTVTARDSPRPNSGDPQLTGSATVTVHVLDVNDCSPEFIVPKTSGESVSVADNAKAGYTVTTVKARDADLNKNGEVTYTILPDSSGSDAGRGLFKMD-RTGVLFMDRSLTPRDARPEPYELIVEAADQGKPS 859

HSP 2 Score: 65.4698 bits (158), Expect = 1.046e-6
Identity = 74/303 (24.42%), Postives = 127/303 (41.91%), Query Frame = 3 
Query: 1137 IDREEVCSKSSKNNDCILRLILVYGRSKKPSFIS-VSITVNDINDNTPKF----NQPE--------------IEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENK-DFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDD-----GNPQKTGTLKIKIRVQDENDNLPLF---EKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQK----LDIDLTPRINR---FDFMVSACDNGNSPRCSRTTVTIRII 1940
            +DRE++ ++  +    +LR+         P  ++ V + V D ND  P+F     +PE              +E      AN   S   +      D  E G I Y ++    D   +  FR+  +   V  + QL   D E R  Y+  + A D      G+PQ TG+  + + V D ND  P F   + +    ++ +N      V  + A DAD ++NG+V Y   LP ++            +++G+G   + +     +D  LTPR  R   ++ +V A D G     +RTT+ + ++
Sbjct:  585 LDREKLAAER-QPAQVLLRVSAADSNPSHPRAVTDVRVIVLDRNDCPPRFVTNNRRPEGVVGISGGADYEFSVEETAGSGANGGPSSTVVGAVRAEDDDEPGRIEYAMETTGLDPDTANSFRVDPNTGQVRAIRQL---DREARAIYVFTVTARDSPRPNSGDPQLTGSATVTVHVLDVNDCSPEFIVPKTSGESVSVADNAKAGYTVTTVKARDADLNKNGEVTYTI-LPDSSG-----------SDAGRGLFKMDRTGVLFMDRSLTPRDARPEPYELIVEAADQGKPSLRTRTTLRVFVV 871
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 208.379 bits (529), Expect = 2.049e-54
Identity = 223/816 (27.33%), Postives = 351/816 (43.01%), Query Frame = 3 
Query:  909 LKMIIVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDL---KPYLSSEMLQTLRLS----NMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRL---ILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLL---DYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQD-QQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFK-SYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA--FEL-TESGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            +   ++F L+V +I       + +   EE  PN+LIG L   +    S  L  L +      ++ KT + F         +  IDRE +     K   C L     +    +++ P  I   I V DINDNTP+F  P +   V ENA+   +   + +A D D + NG + Y L    +   S  F LQ++ D   +L QL +L   D E++  Y + + AVD G P +  +  +++ + D NDN P FEK+ YE  + EN PV   V+++ A D+D   NG++ Y     S+   ++      +  E   G I VK  LD +    I+ F F V A D G SP+ S T V+I + D ND  P + +  I    H D  + I E+  +   +A V V DKD G   +V C +                  L    D S D ++ Y ++     D E     + +I+  D  NP L   N   +Q+T          D NDN P +    +E + + EN+P   EK + +  L+ +D        + ++ + S    FE+   SGE+      DRE  E    R+ A+      +  T ++ +++LD ND  P F L +Y F+ +EN    + VG V   D D      ++  +      F + + +G I  +   DRE++  Y  ++ A+D         R+    V++ VLD NDN P +  P       +         V  +EA D D   N  + Y I       LF I    G   I +   L+        LV+  SD G P+  + A+
Sbjct:    5 VGWFLLFALLVDSINS-ALGGILYHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLRVDGKTGEIF-------TTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGAT-FAIPQATDRDTERNGVLKYDLSAGPEA--SALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKM------LQIERSTGIISVKGPLDRE---EISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGD-----------VPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVT----------DTNDNSPIFSPPLFEVEFAEENQP--GEKVLDVIALD-ADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGE----PPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGE--IKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIAL 770

HSP 2 Score: 102.064 bits (253), Expect = 2.683e-21
Identity = 153/583 (26.24%), Postives = 237/583 (40.65%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD-------LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPR--LMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSIN-NYIAAVSVVDKDSGPGGIVECYLTNQ--NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLK-SPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNR---FYHKLMINPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKIS 2804
            +  + VK  +DREE+   SS     I R     G S K S   VSI V D NDN P      I      +  A +S+       + L +  D D  EN  +T  +    D  F        S DN  +  L     LDYE  + Y +E++AVD GNP  + T  ++++V D NDN P+F   L+E    E     EKV++++A DADS  N ++ Y     S+ +       F I  +   G++  +  LD +      R++F V+A D G        TV I+++D ND  P   ++          S ++ EN    + +  V+V+D D G    V+  +     NF +  G                      I+ +I  FDRE+     F++   D     R++           + + + DENDN P   K S   F+        D     + ++E  D D G+     Y     NP + F ++ S GE+ L     R+       R+   VSD G+ ++     V I     ++ V        + VE      VGH   T  D+DI G  +Y ++
Sbjct:  299 TGIISVKGPLDREEI---SSFKFHVIAR---DKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVA--GDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTR-----GLFEI--DPSSGEVRARSPLDRE---HKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSY--------SFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGT-------------------ILSSIS-FDREKESSYTFRLKAVDGGEPPRSSY--------VGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSV---VEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRK--HGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISNV--------SLVEG----LVGHSLYTPLDTDIAGDPDYGLA 810
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 208.764 bits (530), Expect = 3.648e-54
Identity = 222/810 (27.41%), Postives = 348/810 (42.96%), Query Frame = 3 
Query:  909 LKMIIVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDL---KPYLSSEMLQTLRLS----NMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYG---RSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLL---DYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQD-QQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFK-SYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA--FEL-TESGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPT 3266
            +   ++F L+V +I       + +   EE  PN+LIG L   +    S  L  L +      ++ KT + F         +  IDRE +     K   C L   +      +++ P  I   I V DINDNTP+F  P +   V ENA+   +   + +A D D + NG + Y L    +   S  F LQ++ D   +L QL +L   D E++  Y + + AVD G P +  +  +++ + D NDN P FEK+ YE  + EN PV   V+++ A D+D   NG++ Y     S+   ++      +  E   G I VK  LD +    I+ F F V A D G SP+ S T V+I + D ND  P + +  I    H D  + I E+  +   +A V V DKD G   +V C +                  L    D S D ++ Y ++     D E     + +I+  D  NP L   N   +Q+T          D NDN P +    +E + + EN+P   EK + +  L+ +D        + ++ + S    FE+   SGE+      DRE  E    R+ A+      +  T ++ +++LD ND  P F L +Y F+ +EN    + VG V   D D      ++  +      F + + +G I  +   DRE++  Y  ++ A+D         R+    V++ VLD NDN P +  P       +         V  +EA D D   N  + Y I       LF I    G   I +   L+        LV+  SD G P+
Sbjct:   41 VGWFLLFALLVDSINS-ALGGILYHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLRVDGKTGEIF-------TTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGAT-FAIPQATDRDTERNGVLKYDLSAGPEA--SALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKM------LQIERSTGIISVKGPLDRE---EISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGD-----------VPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVT----------DTNDNSPIFSPPLFEVEFAEENQP--GEKVLDVIALD-ADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGE----PPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGE--IKLTKELTRKHGGLHRLVVKVSDRGKPS 800

HSP 2 Score: 102.449 bits (254), Expect = 1.888e-21
Identity = 153/580 (26.38%), Postives = 236/580 (40.69%), Query Frame = 3 
Query: 1119 LKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSD-------LYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPR--LMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSIN-NYIAAVSVVDKDSGPGGIVECYLTNQ--NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLK-SPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNR---FYHKLMINPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKIS 2804
            + VK  +DREE+   SS     I R     G S K S   VSI V D NDN P      I      +  A +S+       + L +  D D  EN  +T  +    D  F        S DN  +  L     LDYE  + Y +E++AVD GNP  + T  ++++V D NDN P+F   L+E    E     EKV++++A DADS  N ++ Y     S+ +       F I  +   G++  +  LD +      R++F V+A D G        TV I+++D ND  P   ++          S ++ EN    + +  V+V+D D G    V+  +     NF +  G                      I+ +I  FDRE+     F++   D     R++           + + + DENDN P   K S   F+        D     + ++E  D D G+     Y     NP + F ++ S GE+ L     R+       R+   VSD G+ ++     V I     ++ V        + VE      VGH   T  D+DI G  +Y ++
Sbjct:  338 ISVKGPLDREEI---SSFKFHVIAR---DKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVA--GDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTR-----GLFEI--DPSSGEVRARSPLDRE---HKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSY--------SFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTG-------------------TILSSIS-FDREKESSYTFRLKAVDGGEPPRSSY--------VGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSV---VEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRK--HGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISNV--------SLVEG----LVGHSLYTPLDTDIAGDPDYGLA 846
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh1b (protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2])

HSP 1 Score: 205.682 bits (522), Expect = 1.448e-53
Identity = 219/816 (26.84%), Postives = 352/816 (43.14%), Query Frame = 3 
Query:  927 FVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDL---KPYLSSEMLQTLRLSN----MNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILRL---ILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISP---DNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQ-NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFK-SYENRPRNDEKRVKLGILEVSDKDLGNR---FYHKLMINPSQA-FELT-ESGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            + +++L   G    ++ +   EE  PN+L+G L   +    +  L  L +      ++ KT D +            IDRE +  C    + + C L     I    +   P  I   I + D NDNTP+F  P +E  + EN    A  S   +  A D D   NG   YKL    D +    F LQ++    + VP+L+ L  LD E R  Y + +  +D G P +  +  ++I + D NDN+P FE++ YE  + EN PV + V+++ A D D   NG+V Y F  PS N Q+L      +  +   G I VK  +D +  P +    F V A DNG   + S+  VTI + D ND  P I +       H D  + + E+  +   +A V V DKD G   +V C +     F+L                  S  ++ Y ++     D E     + +I+  D  NP L   N   +Q+T          D NDN P +  S YE   + EN+P +     K+  +  +D D G      Y  +  + ++  F++   +GE+ ++   DRE  E     + A+         T ++ V++LD ND  P F L+ Y F+ +EN    + VG V   D D      ++  +   +  F I + +G I  +   DRE++  Y  ++ A+D  +      R+    +++ VLD NDN P +  P       +        +V  ++A D D   N  + Y I       LF I S  G + +  + +   N L    LV+  SD G P+  ++A+
Sbjct:   20 WTVLLLYSCGSSLASITYQLREEQPPNTLVGSLAADQGLPDTGHLYKLEVGGPYLRVDGKTGDIY-------TTDVPIDRETLKDCRNLFEGDPCFLEFEVSITDLMKGSGPRLIEGRIEIQDENDNTPQFPSPILELAIPENTYVGAHYS---IPVAMDKDAGSNGIADYKLNSGSDAM--NLFSLQVADNTDEKVPQLIVLGNLDREQRDTYDLSIKVIDGGTPPRYSSALLRITITDTNDNVPKFERSHYEGEMAENTPVGQSVLQVKANDDDLGANGQVTYSFHQPSPNVQRL------LHIDHNTGIIQVKGSVDREEVPLLK---FSVQARDNGPQAKSSKAMVTITVKDRNDNAPSIRIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVPFQLRSA-----------SASDSTSKRKYFLQTTTPLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVT----------DMNDNAPVFSPSLYEVDFAEENQPGD-----KVLDVVATDADSGTNAELLYSIITDSATKGLFDINPNTGEVRVMNQLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMPPLSPVGMVTVIDADKGENAHVQLSVEPENGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDGGD----PPRSSYVGITINVLDENDNAPYVTKPSNSSYKFLQPLTSPDTRVEKVDAEDIDTGLNAELVYSITGGNPHGLFRISSTDGEITLAKEFTRKHNGL--HRLVVKVSDKGKPSRHTTAL 782
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: ENSAMXT00000050733.1 (pep primary_assembly:Astyanax_mexicanus-2.0:20:10707461:10713100:1 gene:ENSAMXG00000042154.1 transcript:ENSAMXT00000050733.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 201.83 bits (512), Expect = 8.546e-53
Identity = 189/702 (26.92%), Postives = 321/702 (45.73%), Query Frame = 3 
Query:  900 FA*LKMIIVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEM----LQTLRLSNMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDN----VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNN-GHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG--NRFYHKLMINP--SQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDG-RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFST-----------FVGHVEATDQDSDIYGPIEYKISLPSP--LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNA 2921
            FA L +I ++VL    +R    + + +  +EE+ P + +G L   L+ ++     + LR+ + + K      + +  L V+++IDREEVC  S+   + +  ++     +   +  S+ + + D+NDNTP F + + +H+ +       +   L  AEDPD   N   +YKL  N      QFF L+++ +      P L+    LD E +    + L AVD G P ++GT  I + V D NDN P F K +Y+  + EN  V   ++++ ATD D   NG++ Y F       Q+   + F  +  S  G+I +   LD +    ++ ++  V A D G+SP  S   V + ++DVND  P I +  + +N   G +  ++        IA ++V DKD G  GIV C ++N +  +++    K                 Y +   +E DRE+N+     I   D        +    L++   + V + D NDNPP +L+        EN P        + ++   D D+G  ++  + L      S A  + + +GE++ + SF+ E ++    ++ A+ S     +  V++NV ILDEND  PV +L  Y       S ST           FVG + A D DS     + Y I+ P    LF + S SG IR   +L   + + + + I   D+ 
Sbjct:    4 FADLWIIYLYVLFYC-LRHVVSRQIVYSVSEEVSPGTFVGPLAKDLNLKLDELESRALRIVSTSSKKHFDVNMKTGALFVQKAIDREEVCPNSNVCTESLEAIV-----NNPLNVYSIDVKILDVNDNTPTF-RGKYQHIKISEQTMPGAKFPLLSAEDPDVGSNSVASYKLSNN------QFFSLEVNTEAESGPSPELVLQKALDREKQAEIQLILTAVDGGRPARSGTASIVVSVLDANDNAPTFAKQVYKARVPENAAVGMVILKLNATDPDEGVNGEIIYTF----KEGQKGVSDRF--IINSSSGEIAIAGPLDYE---DVSAYELRVEARDKGHSPLASHCKVLVEVLDVNDNAPDIKLTSLLDNVSEGAKKGSV--------IAFITVQDKDEGKNGIVHCSISNNSPFILESTQGK----------------YYSLVLGQELDREQNELYNVSITATD--------EGIPPLSSTTVVTVRVYDVNDNPPRFLEQFVNVYVKENSPAGG----LIALVSAQDIDIGENSQVTYSLFAKSYLSSAVSINSMTGEIYSMQSFNYEEIKHFQFQVQATDSGTPPLSSNVTVNVFILDENDNRPV-TLPPYS---EAGSVSTENIPYSAEAGYFVGKIRAVDADSGYNALLSYHITEPKGNNLFRVGSSSGEIRTKRRLSDNDLKTHPLVITVCDHG 643

HSP 2 Score: 91.2781 bits (225), Expect = 4.166e-18
Identity = 153/586 (26.11%), Postives = 231/586 (39.42%), Query Frame = 3 
Query: 1575 IKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIV----TESGKGKIYVKQK-LDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGG-IVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG-NRFYHKLMINPSQ-AFELTESGELFLVLS--FDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI---SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWP----IGHKVFTMEAFDPDLKENGSVSYKIIK-DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPT 3266
            I +++ D NDN P F        I E      K   + A D D   N   +Y+    SNNQ      +F +      ESG     V QK LD +    I     +++A D G   R    ++ + ++D ND  P                + +PEN+ +   I  ++  D D G  G I+  +   Q     +G++D+     + +N  S +  I         D E+    + ++  +D         +P  L +  +++V + D NDN P+   +       +N     +K   +  + V DKD G N   H  + N S    E T+     LVL    DRE  E   V I A+  +G    + T  + V++ D ND  P F          ENS     +  V A D D      + Y +   S  S   SINS +G I      + EE + +  Q+ A D+         T    +    LD NDN P    P  +   V   N P     G+ V  + A D D   N  +SY I +  G NLF + S SG   I  K  LS+N L +  LV+   D+G P+
Sbjct:  115 IDVKILDVNDNTPTFRGKYQHIKISEQTMPGAKFPLLSAEDPDVGSNSVASYKL---SNNQ------FFSLEVNTEAESGPSPELVLQKALDREKQAEIQ---LILTAVDGGRPARSGTASIVVSVLDANDNAPTFAKQVY--------KARVPENAAVGMVILKLNATDPDEGVNGEIIYTFKEGQ-----KGVSDR-----FIINSSSGEIAI-----AGPLDYEDVSAYELRVEARDK------GHSP--LASHCKVLVEVLDVNDNAPDIKLTSL----LDNVSEGAKKGSVIAFITVQDKDEGKNGIVHCSISNNSPFILESTQGKYYSLVLGQELDREQNELYNVSITAT-DEGIPPLSSTTVVTVRVYDVNDNPPRFLEQFVNVYVKENSPAGGLIALVSAQDIDIGENSQVTYSLFAKSYLSSAVSINSMTGEIYSMQSFNYEEIKHFQFQVQATDSGTPPLSSNVTVNVFI----LDENDNRPVTLPPYSEAGSVSTENIPYSAEAGYFVGKIRAVDADSGYNALLSYHITEPKGNNLFRVGSSSGE--IRTKRRLSDNDLKTHPLVITVCDHGEPS 646

HSP 3 Score: 73.1738 bits (178), Expect = 1.423e-12
Identity = 122/492 (24.80%), Postives = 201/492 (40.85%), Query Frame = 3 
Query: 1920 TVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSI-NNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG-------------NRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVS---INVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKISLPSP--LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKL-----VVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF--NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFEN 3314
            ++ ++I+DVND  P     Y        +   I E ++       +S  D D G   +    L+N  F  ++            VN +++      +   K  DRE+   I+  +   D     R        +  A IVV + D NDN P + K  Y+ +     P N    + +  L  +D D G                  + +IN S       SGE+ +    D E + +  +R+ A   D  ++   S   + V++LD ND AP   L +   N  E +   + +  +   D+D    G +   IS  SP  L S   K   + +  +LDRE+ E Y + I A D          + TT V+V V D+NDN       PP+ L     V +  N P G  +  + A D D+ EN  V+Y +    +  +  SI+S +G ++ +   S +  ++      + A+D+G P P SS V+V + +  EN
Sbjct:  114 SIDVKILDVNDNTPTFRGKY--------QHIKISEQTMPGAKFPLLSAEDPDVGSNSVASYKLSNNQFFSLE------------VNTEAESGPSPELVLQKALDREKQAEIQLILTAVDGGRPAR--------SGTASIVVSVLDANDNAPTFAKQVYKAR----VPENAAVGMVILKLNATDPDEGVNGEIIYTFKEGQKGVSDRFIINSS-------SGEIAIAGPLDYEDVSAYELRVEAR--DKGHSPLASHCKVLVEVLDVNDNAPDIKLTSLLDNVSEGAKKGSVIAFITVQDKDEGKNGIVHCSISNNSPFILESTQGKYYSLVLGQELDREQNELYNVSITATDEG----IPPLSSTTVVTVRVYDVNDN-------PPRFLEQFVNVYVKENSPAGGLIALVSAQDIDIGENSQVTYSLFAKSYLSSAVSINSMTGEIYSM--QSFNYEEIKHFQFQVQATDSGTP-PLSSNVTVNVFILDEN 550
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 201.445 bits (511), Expect = 3.622e-52
Identity = 223/790 (28.23%), Postives = 364/790 (46.08%), Query Frame = 3 
Query:  990 EELHPNSLIGDLKPYLSSEMLQTLRLSNMNF------KTSDYFLLH-----SSYLKVKRSIDREEVC-SKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQI--SPDN--VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFA--LPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDN--PNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT-VSINVQILDENDLAPVFSLDTYRFNCVEN--SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ---KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFN--LFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIP 3263
            EEL  N LIG++   L+   + T   ++ N       K  D  LL               IDRE++C   S ++++C   + +V   +     I + I V D NDN P F  P I   + EN   N+R +   +  A DPD   N    Y+L   +       F L I  +P+    P+L+    LD E +  Y+M++   D G+PQK+ T  +++ V D NDN P+F+++  E  I E+ PV   V+++ ATDAD   N ++ Y F   +    ++  A N       S  G I V++ LD     R    +  +S   +  S   +R TVTI + DVND  P I + YI +  +G    +  ++ +N  IA ++V DKD+   G V C++       ++ + D +                Y+++     D E      FKI+  D+  P+L +           A + V ++DENDNPP + +   E    EN  R+    + L  +  +D+D G        + P+ + F+L  ++G L     FDRE  E     + A  +  R  Q+  ++ V ILD+ND +P F+ + ++F   EN   +ST VG +  TD D+     +   I   +  F ++  +G+I+     DRE++  Y   + A+D+ +       +    V++ V+D+NDN P + +PP     KLV + S  P G  V  + A D D   N  + Y I+ +G N  LF ID  +GN+ +  K + +++ L    LV+  SD G P
Sbjct:   32 EELQENVLIGNIPKDLNISHMNTATGASNNLVYRLVSKAGDNPLLRVMSNTGEIFTTSNRIDREKLCPGPSYEDSECSFEIEVVILPNDYFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFA---IPSATDPDMGPNSVYKYELVNGQ-----SAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALN-------STTGLITVQRPLD-----REETANHKLSVLASDGSSSSARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLS-EKDPVNTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQ----------------YLLETSALLDYEGTKEYIFKIVASDSGKPSLNQT----------ALVRVRLEDENDNPPIFTQPVIELTVSENNKRD----LYLTTITATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYST-VGVITVTDADAGENAVVSLSILNDNENFILDPYTGVIKSNVSFDREQQSSYTFDVRAVDSGH----PPCSSAAKVTINVIDVNDNPPIVIYPPSNTSFKLVPL-SAIP-GSVVAEVFAVDGDTGMNAELKYTIV-NGNNKGLFRIDPVTGNITLEEKPTEADSGL--HRLVVNISDLGYP 760
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BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21])

HSP 1 Score: 185.652 bits (470), Expect = 4.550e-48
Identity = 215/778 (27.63%), Postives = 322/778 (41.39%), Query Frame = 3 
Query: 1065 LSNMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRL-ILVYGRSKKPSF--ISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQIS----PDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNG------------NSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQ--AFEL-TESGELFLVLSFDREAMESNPVRIFAS-----VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN--SFSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKL--VVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQI 3296
            L  +N +T + F          R +DRE +C      ++C + + + V      P F  I V I V DINDN P F  P +   V ENA A      +  A DPD + NG   Y+L  +     S F  L ++     + VP L+    LD E R+ Y M L AVD G+P  +G+  ++I V D NDN P+F++A     I EN PV   V+++ A+D D+  N +V YR    +               +   G + V   L+ + +P    +  ++ A D G                 +  + TI I D+    P+  V YI+   H           +N  +A ++V D D G  G V CY+ N                L ++   +Q    Y+++  +  D E  +    +I   D             L+    + + + D NDN P + +  Y+       P N+     L  +  +D+D+         + P     F +  E+G + L    DRE   +    I A      V +G  N TV +NV  LD ND  P FSL  + F   EN    ST VG V   D D    G +   I  +    LFSI+ +SGMIR     DRE++ +Y +++ A D         R+ T  V + V+D+NDN P +  PP       V+    P G  V  + A D D + N  + Y I+     NLF ID   GN  I +   L+E       LV+  SD GI     +   V +
Sbjct:   85 LVRVNPRTGELF-------AAGRKMDREALCGGQDPGDECHVDVQVGVLPVQPGPFFKLIEVRINVEDINDNAPAFAAPVLTVSVPENAPAG-KRFPIQPANDPDSEANGVRRYELLPSDPATVSAF-ELSVTETANGEKVPYLVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESP---VYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDI--VAPVNGVIYISEASH-----------VNLPVALITVSDPDIGANGAVTCYIYNPEV----------PFQLKKLTYPNQ----YLLETRETLDYETKNEYVVQIKAAD--------AGATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSV----PENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEG--NATVIVNV--LDVNDNRPRFSLAEFDFYVNENVPKHST-VGMVTVADSDEGENGRVRLSILGTDNRQLFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGE----PVRSSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTLP-GTIVTEVSAVDNDAEINAELRYHIVGGNPHNLFHIDPVIGN--ITLMEPLTETHHGLHRLVVRVSDIGIAVQHHAVALVHV 799
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BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 162.54 bits (410), Expect = 2.555e-40
Identity = 193/703 (27.45%), Postives = 287/703 (40.83%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGT--ITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-----LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAA-VSVVDKDSGPGGIVECYLTNQNFEL---IQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRF-YHKLMINPSQAFELTESGELFLV-LSFDREAMESNPVRIFASVSDGRYNQTV--SINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKISLPSP-----LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            V + V D+NDN P F +P +  V  +   A    + L  A D D   NG     YK+         +  RL + P  V +   L L     LD E    Y + + A D G+P++ G L++ + VQD NDN P FEK  Y  ++ E+ PV   + +++                      +  LA  +     +   G +  +Q LD +      ++   + A D GN P   R T  I+++DVND  P I   Y+        S+++ E++    +AA V+V D DS             N EL   I G N++    L+          + ++K   + DRE        I+  D       N  P+  +  A +VV ++D ND+ P +  S Y     E  P      VK      +D  L  +  Y  +  N    F + ES  L       DRE   S  + I A    G   +T   S+ V +LD ND  P+F+   Y    VENS    FV  V A D D    G + Y      P     +F ++S +G +     LDREE E Y + + A D  +   G     T  V     DLNDN+P   F P Q    I  N P G  V T+ A DPD   NG+V Y++       F +++ +G   +  + SL   +     L + A D G    +S A+
Sbjct:    9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGN-----EEGRL-VPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALRDLL-------------------HRGRGPLAVPF-----DPKTGMVSTRQPLDFEAR---RQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAAR---SASVDESAAPGTVAALVTVTDADS----------PTANGELSVSIVGGNERGHFVLHAPGVPG----LRVLKVASQLDRERIPMYNLTILASD-------NGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAG--SYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQ-DQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVG----DLNDNHP--VFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGA--VSTRVSLDREERAVYQLQVTALDGGHLRARSPAI 643

HSP 2 Score: 154.836 bits (390), Expect = 5.209e-38
Identity = 205/761 (26.94%), Postives = 314/761 (41.26%), Query Frame = 3 
Query:  957 FGCKNVHFVTTEELHPNSLIGDLKP-YLSSEMLQTLRLSNMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVEN--ANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGK-GKIYVKQKLDIDLTPRINRFDFMVSACDNGN-SPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSIN-NYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVK--LGILEVSDKDL---GNRFYHKLMINPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSDG----RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISL---PSPLFSINSKSGMIRVTTKLDRE-EKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSG 3173
            F   +  FV  E + P +L+G +    L      T  + + + + S         +    +IDREE             +L +V          SVS+ V+D+N++ P F++   E  + E+   N+R    +   A D D  +NG + Y++ E          +  I PD   +L   + LD E R+ Y + + A+D G    + ++ + + V D NDN PLF  + Y     E   V   V  + ATDAD+  NG V Y F  P  N        F + +E+G+   + V  +  +        F F V A D G   P   R TV + + DVND  P    +           +++ E++ N   +  V+  D D G            N  L   IN+      + V D S  Q    I  +   DREE       +   D      +  +P+  +    + VL  DENDNPP + +S     + E+       RV   L  L  SD+D    G+  Y  +  N    F +  S G +FL    D E       R+  S  DG    R + T+ + V + D ND  P F       + +EN    T V  V A D D+D+ G + Y I+    P   F+I+ +SG I    ++DRE     + + + A D A      RR+    V+V V D NDN P  +F  P  ++V       G  V T++A DPD  EN +V Y +   D   LF +D ++G
Sbjct:  658 FARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSGDQRGSFSIEWSGGRIFTANAIDREE---------QAFYQLRVVANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRF---FSVRATDKDSGKNGEVKYEIGEGNGG-----EKFGIFPDG--QLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVN--------FELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVY--------QASVSESASNLTQLLRVTASDVDEG-----------VNGALRYAINEGNEGGKFTV-DASTGQ----ITLLGSLDREETASYTLVVSATD------SGTSPLAASCTVAVQVL--DENDNPPRFTESLLSVDALES------TRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRL--YRLNVSAEDGGRPPRSSATILV-VHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKA-IPVHTRRSALKNVTVLVTDENDNAP--RFVTPTAILVDGLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTG 1347

HSP 3 Score: 146.747 bits (369), Expect = 1.686e-35
Identity = 195/768 (25.39%), Postives = 318/768 (41.41%), Query Frame = 3 
Query: 1059 LRLSNMNFKTSDYFLLHS------SYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKP----SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRF--ALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPII-TVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL-GNRFYHKLMINPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISL--PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSG---NLFIVVKHSL-SENQLTSSHLVLVASDNGIPTPKSSAVSVQI 3296
            L +S +      +F+LH+        LKV   +DRE +          +  L ++   + KP    +  S+ + VND+ND+ P+F        + E A A  S +    A D D   N  + Y +    D     +F +  S   V    ++   D EV    ++ + A D G   KT    + + + D ND  PLF +  Y  T +EN      V+ + A D+D  ENG V Y F   +P+  ++    +          GK+   + LD +    +  +  +V A D G+ P  S   VT+ + D+ND  P+   V Y         +S +        +  V+  D D G  G V   LT  +    Q +N        RV+                 DREE    + ++   D  +L+          + A + + + D  D PP + +  Y F  +EN          +G +  S  DL  N  Y  +  +   +F +  S G +F   + DRE      +R+ A  + G      S++V + D N+ APVF   +Y  +  E+   ++    V ATD+DS   G ++Y+I        F I    G + V  +LDRE +E Y++ + A+D          + + TV+VTVLD+NDN P   F     +        +G  V  ++A D D   NG V+Y   K   N F +DS++G   +L +  + +L  +    S    +VA+D G P P     +VQ+
Sbjct:  266 LSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIP---------MYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAG-SYVKDVTAMDADSGLNAKLRYSIVSGNDL---GWFSVDESTGLVTTDGKV---DREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSL-------TGKVTTLKSLDRE---ELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYF--------ASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQ-VNAVTGAVSTRVS----------------LDREERAVYQLQVTALDGGHLRAR--------SPAIVTITVADAQDTPPTFARDDYSFVVFENV----APGTLVGSVSASTLDLNANVTYLIVSGDQRGSFSIEWSGGRIFTANAIDREEQAFYQLRVVA--NSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGI-FPDGQLYVRYELDRETREEYSLTVSAMDTG----VEPLSSSVTVNVTVLDVNDNKP--LFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVN-FELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQV 960

HSP 4 Score: 123.635 bits (309), Expect = 1.890e-28
Identity = 165/665 (24.81%), Postives = 264/665 (39.70%), Query Frame = 3 
Query: 1212 RSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIE-----IVATDADSDENGKVNYRFALPSNNQQQLACNYFGI--VTESGKGKIYVKQKLDIDLTPRINRFDFMV--SACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINP------------SQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGR--YNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPL--FSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSY 3122
            R    SF  V I+V D+NDN P F  PE+E  V EN       ++   A D D+ +N  +TY +    +  F     +  +   V R  +   LD E R  Y++ + A D  +       ++ + V+D NDN P F +  Y   + E+     K        ++A DADS   G+V Y  AL  +     A   FG+  VT    G + V + LD     R +R  +++   A D G     +R  + + ++D ND  P +  + +        ++ +PE++     +  +S  D D G            N EL   I+  +    + V +  Q      +   +  DRE        +   D     R    P +L++   + +++ D NDN P +  SP    + E+ P        +  ++  D D G   Y +  +                 F L T +GE+ LV   DREA +S  + + A V  GR     T ++ V + D ND AP F    Y     E+    T V  + A D D    G + Y I+   P   F ++   G + V   LDRE    Y + + A D          +   T+S    D+ND  P  +  P       ++  P    +  + A D DL  +G V+Y
Sbjct: 1493 RPPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEEN-TGEGEVIFTLSATDADQGQNALVTYSVLSGSEGAF-----VVDAASGVLRASR--RLDREERASYLLTVRASDGTHATDA---RLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTY--ALAPSEDSDWADGAFGLHPVT----GALNVTRPLD-----RESRACYVLRARATDGGGLAATAR--LYVNVLDANDNAPSVQNDSL--------AAEVPEDAPPGTSLLRISATDDDEG-----------VNAELEFSISSGDPEGRFAVGNDGQ------LSVARALDRERQSFYNLVVRVSD-----RARHPPARLSSAVRVSLILTDVNDNAPAF-TSPRSALAPEDSPVG----AVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLA-VDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLS----DVNDCSPAFQLSPYTVHARENTQGPP-VLILQVVARDDDLGSSGQVTY 2092

HSP 5 Score: 119.398 bits (298), Expect = 3.803e-27
Identity = 147/601 (24.46%), Postives = 238/601 (39.60%), Query Frame = 3 
Query: 1572 KIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSA-CDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLT-NQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMI---NPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSD------GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISL-----------PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK-DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            +++I V+D NDN P+F     E  + EN    E +  + ATDAD  +N  V Y           L+ +    V ++  G +   ++LD     R  R  ++++    +G     +R +V +R  D ND  P  + +  + +   D +   P+  +    I  V   D DSGP G V   L  +++ +   G     +  L+ V           +   +  DRE       +    D   L             A + V + D NDN P         +  E+ P        L  +  +D D G     +  I   +P   F +   G+L +  + DRE    +   +   VSD       R +  V +++ + D ND AP F+         ++     V  V+A D DS     +EY ++                F++N+ +G +R+  +LDRE ++ YA+ +LA+D          T   TV     D NDN P  +FP  +    I  + P G +V  + A+DPD   NG + Y I   D    F +D   G L   V   L   +  S  L + A D G P  +S   SV++ L
Sbjct: 1501 QVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSV---------LSGSEGAFVVDAASGVLRASRRLD-----REERASYLLTVRASDGTHATDARLSVAVR--DANDNSPRFSRHAYSFDVAEDAA---PDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADG-----AFGLHPVTGA--------LNVTRPLDRESRACYVLRARATDGGGLAAT----------ARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPG----TSLLRISATDDDEGVNAELEFSISSGDPEGRFAVGNDGQLSVARALDRE--RQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVG----DANDNAP--RFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTL--AVARPLDRERTASYELAVRARDGGGPA-RSDTASVRVTL 2044

HSP 6 Score: 114.775 bits (286), Expect = 8.899e-26
Identity = 178/718 (24.79%), Postives = 283/718 (39.42%), Query Frame = 3 
Query: 1206 YGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFE-----KALYEETIMENIPVKEKVIEIVATDADS-DENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNS-PRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLGNRFYHKLMINPSQAFELTE-------SGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLP-SPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK-DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQ 3293
            YGR      + V++TV D NDN P F +P     V E++   A L DL          +  G +          + ++       P           LD+E R+ Y + L A D GNP  +G     I++ D NDN P         A    ++ E+         +  TDADS   NG+++    +  N +     +  G+    G   + V  +LD +   RI  ++  + A DNG    R +  ++ + + DVND  P     +  +      S   P  S   Y+  V+ +D DSG            N +L   I     L  + V     D+   ++    + DRE    +   I  +D        Q     T    + V + D ND PP + ++ Y   + EN          L ++ VS  D DLG     +   +P    +  E       +G++  + S DRE +E  P+ + A          T  + V + D ND  PVF    Y  + +EN    T V  V ATD D    G + Y+++   +  F +N+ +G +     LDREE+  Y +Q+ A+D  + R       T TV+    D  D  P   F       V+  N   G  V ++ A   DL  N +V+Y I+  D    FSI+   G +F    +++   +     L +VA+  G+    S +V V 
Sbjct:  117 YGR------LQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALRDLL--------HRGRGPLAVPFDPKTGMVSTR------QP-----------LDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSI-VGGNERGHFVLHAPGV---PGLRVLKVASQLDRE---RIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAP----RFALSAYAAALSEGAPAGS---YVKDVTAMDADSG-----------LNAKLRYSIVSGNDLGWFSV-----DESTGLVTTDGKVDREVASSVVLNISAQD--------QGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVEN------SLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVA----DAQDTPP--TFARDDYSFVVFENVAPGTLVGSVSASTLDL--NANVTYLIVSGDQRGSFSIEWSGGRIF--TANAIDREEQAFYQLRVVANSGGVAGEASVSVLVH 749

HSP 7 Score: 95.9005 bits (237), Expect = 4.660e-20
Identity = 102/377 (27.06%), Postives = 159/377 (42.18%), Query Frame = 3 
Query: 1119 LKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKP-----SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQF------FRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFAL--PSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDK-SQDQQIYII 2207
            L V R++DRE    + S  N     ++ V  R++ P     S + VS+ + D+NDN P F  P     +    +   + +   +A DPD   N  + Y L  + +            F L      V RL++   LD E R+ Y + +LAVD G P  T T  + + V D NDN P F +  YE  I E+ P   +V+ + A D D   NG++ Y  A   P+ + +           +   G + V + LD +   R   ++  V A D G   R    +V + + DVND  P   ++  T   H  E++  P   I   +A     D D G  G V       N      ++    ++L R  D+ +Q Q + II
Sbjct: 1785 LSVARALDRE----RQSFYN----LVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPR--SALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEV-RLVRE--LDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFR----------LDPVLGTLAVARPLDRE---RTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTV--HARENTQGPPVLILQVVAR----DDDLGSSGQVTYAAAGGNDGGAFSVSPDGHVHLLRSLDREAQPQHVLII 2129

HSP 8 Score: 63.1586 bits (152), Expect = 4.602e-10
Identity = 90/352 (25.57%), Postives = 148/352 (42.05%), Query Frame = 3 
Query: 2310 QLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS-DKDLG----NRFYHKLMINPSQAF-----ELTESGELFLVLS--FDREAMESNPVRIFASVSDG----RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKF---PPPQKLVVIDSNWPIGHKVFTMEAFDPDL-KENGSVSYKIIKD---GFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQI 3296
            Q T   E+ V++ D NDN P +     E    E   + D    +  +L+ + D+D+G    N   +K++    +        +T+   L L  +   DREA  S  + + A   DG    RY + + +NV + D ND  P F    YR +  E+S       V A  +D    G     +++P      + K+GM+     LD E +  Y + + A D  N       +G  T  + +LD+NDN P I+F   PP  +   +D +   G     +   D D    NG +S  I+     G  +       G   + V   L   ++   +L ++ASDNG P  +S+  S+ +
Sbjct:    2 QPTYPTEVRVVVGDVNDNAPSF----PEPGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAE--DGGSPRRYGR-LQVNVTVQDANDNPPAFEKPAYRASVAEDS------PVGAALRDLLHRG--RGPLAVP-----FDPKTGMVSTRQPLDFEARRQYTLSLRAADGGN----PPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVV 329
[Close]
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006996.1 (pep scaffold:Pmarinus_7.0:GL476780:2096:143714:1 gene:ENSPMAG00000006222.1 transcript:ENSPMAT00000006996.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 157.918 bits (398), Expect = 7.588e-39
Identity = 191/663 (28.81%), Postives = 297/663 (44.80%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPD-NVPRLMQLFLLDYEV--RKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDAD-SDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACD--NGNSPRCSRTTVTIRIIDVNDFRPIIT-VNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL-----GNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPS--PLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII---KDGFNLFSIDS 3164
            V I + D+NDNTP F +        EN N+ L+ +    A D D   N  ITY +       +S +F + +S    V  L +   LDYE        + ++A+D G+P    T+   + V DENDN P+F++  Y   I ENI     V+ + ATD D S E G+++  ++L  + Q ++             G I     LD +    ++++  +V A D  +GN  +    TV I ++DVND  P    + Y         + TI EN+     I  VS  D D            N+N  L+  I+       YR+N  S      I     + DRE+ + I F  +     +       P + T  A + VL+ D NDN P ++  PY  +  E  P N        + +V+  D      GN  Y      P   F+L   +G +  ++  DREA+ +  +R+ A+       + T ++++ +LD ND AP F       + +E+ +  + V  +  TD DS +   + + I+  +    FS+  + G++R    LDRE K  Y++ I AIDN     G RRTGTTT+ V VLD+NDN P   F      V +  N   G  +  ++A D D   NG V Y+II   +DG  L ++ S
Sbjct:  117 VRINLLDVNDNTPVFQRDSYVGTARENDNS-LTPVVRVRATDEDSPPNNQITYSILPTS--AYSSYFSITVSGGYGVVTLARA--LDYEKIPGGTISLTIMALDGGSPPLNSTVTAIVEVFDENDNSPIFDRNSYSIAIPENILAGATVLYVNATDGDQSPEYGQLSLIYSLEGSTQFRINAR---------SGDITSTTLLDRE---AVSQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPY---------AVTIVENTPGGTDIFTVSAADPD-----------LNENGTLVYAIDPPNP--FYRINAASGK----IRTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVLEGLPANST------LFQVTATDPDEGANGNVTYSMTAALPRPDFQLDAATGLITTLVQLDREAVAAYQLRLVATDRGTPALSSTTTLSLVVLDVNDNAPTFHPARSAVSLMESVARDSVVISLNCTDADSGLNAELSFFITGGNQDGQFSVGFRDGLVRTVVSLDRETKASYSLVIEAIDNG--PAGSRRTGTTTLDVLVLDVNDNRP--LFLEGSYEVSVPENVTRGAIILQVQATDIDEGINGRVWYRIISGNQDGNFLVNVSS 726

HSP 2 Score: 150.214 bits (378), Expect = 1.571e-36
Identity = 191/697 (27.40%), Postives = 293/697 (42.04%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQL-FLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFEL--TESGELFLV-LSFDREAMESNPVRIFAS----VSDG--------RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN--SFSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII---KDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNG 3257
            V IT+ + NDN P F+ P     V ENA    S + +  A D D    G ++Y   ++ D         + S D    L+ +   LD+E    + + ++A D G  +  G  +++I + D NDN P+F++  Y  T  EN      V+ + ATD DS  N ++ Y   LP++       +YF I    G G + + + LD +  P        + A D G+ P  S  T  + + D ND  PI   N          S  IPEN +    +  V+  D D  P            +  +  I   E    +R+N +S D     I +    DRE     ++ +I +       N+Q     T  A + + + D NDN P +   PY     EN P   +    +  +  +D DL         I+P   F      SG++    L  DRE +  NP+  FAS    V  G        R   + ++ V + D ND  P F    Y    +E   + ST    V ATD D    G + Y +  +LP P F +++ +G+I    +LDRE    Y ++++A D          + TTT+S+ VLD+NDN P   F P +  V +  +      V ++   D D   N  +S+ I    +DG   FS+  + G +  VV  SL      S  LV+ A DNG
Sbjct:   16 VHITLINENDNRPIFSLPLYNVSVWENATLGTSVVQVL-ATDLDAGVFGQVSYHFSDDSD---------KFSLDPASGLISVAAALDFEATPRFTVTVMARDGGGQETAG--RVRINLLDVNDNTPVFQRDSYVGTARENDNSLTPVVRVRATDEDSPPNNQITYSI-LPTSAYS----SYFSITVSGGYGVVTLARALDYEKIPG-GTISLTIMALDGGSPPLNSTVTAIVEVFDENDNSPIFDRN--------SYSIAIPENILAGATVLYVNATDGDQSP-----------EYGQLSLIYSLEGSTQFRINARSGD-----ITSTTLLDREAVS--QYILIVRAVDGGDGNDQK----TGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTD----IFTVSAADPDLNENGTLVYAIDPPNPFYRINAASGKIRTTGLQLDREDL--NPIS-FASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVLEGLPANSTLF-QVTATDPDEGANGNVTYSMTAALPRPDFQLDAATGLITTLVQLDREAVAAYQLRLVATDRGT----PALSSTTTLSLVVLDVNDNAP--TFHPARSAVSLMESVARDSVVISLNCTDADSGLNAELSFFITGGNQDG--QFSVGFRDGLVRTVV--SLDRETKASYSLVIEAIDNG 646

HSP 3 Score: 137.117 bits (344), Expect = 1.558e-32
Identity = 154/591 (26.06%), Postives = 253/591 (42.81%), Query Frame = 3 
Query: 1563 GTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMI---NPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYN----QTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTT-KLDREEK---EFYAIQILAIDNANXXXXXXXXXXXXXXXXXL-DLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK-----DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSS 3278
            G+ ++ I + +ENDN P+F   LY  ++ EN  +   V++++ATD D+   G+V+Y F   S++  + +        +   G I V   LD + TP   RF   V A D G      R  V I ++DVND  P+   +        +++S  P       +  V   D+DS P           N ++   I    + + Y     S    +  +    ++++     I   I+  D          P+  T  A  +V + DENDN P + ++ Y        P N      +  +  +D D    +    +I     S  F +   SG++      DREA+ S  + I  +V  G  N       ++N+ +LD ND  P +    Y    VEN+   T +  V A D D +  G + Y I  P+P + IN+ SG IR T  +LDRE+     F +++ + +  A+     RR   +     +L D+NDN P      P  L V++   P    +F + A DPD   NG+V+Y +       D    F +D+ +G +  +V+  L    + +  L LVA+D G P   S+
Sbjct:   12 GSARVHITLINENDNRPIFSLPLYNVSVWENATLGTSVVQVLATDLDAGVFGQVSYHF---SDDSDKFSL-------DPASGLISVAAALDFEATP---RFTVTVMARDGGGQETAGR--VRINLLDVNDNTPVFQRDSYVGTARENDNSLTP-------VVRVRATDEDSPP-----------NNQITYSILPTSAYSSYFSITVSGGYGVVTLARALDYEKIPGGTISLTIMALD------GGSPPLNSTVTA--IVEVFDENDNSPIFDRNSYSIAI----PENILAGATVLYVNATDGDQSPEYGQLSLIYSLEGSTQFRINARSGDITSTTLLDREAV-SQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTDIFTVSAADPDLNENGTLVYAIDPPNPFYRINAASGKIRTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSF-VGLPYALQVLE-GLPANSTLFQVTATDPDEGANGNVTYSMTAALPRPD----FQLDAATGLITTLVQ--LDREAVAAYQLRLVATDRGTPALSST 548

HSP 4 Score: 131.339 bits (329), Expect = 8.562e-31
Identity = 151/587 (25.72%), Postives = 246/587 (41.91%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRK-FYMMELLAVD---DGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETI--MENIPVKEKVIEIVATDADSDENGKVNYRF--ALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDK----DSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEI-VVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG-NRFYHKLMINPSQAFELT--ESGELFLVL--SFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS--FSTFVGHVEATDQDSDI--YGPIEYKI-SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNA 2921
            SV I + D NDN P F     E ++ E  +     +    A DPD  +N  + Y +        +  F +    +    L  +  LD+EV    Y++ + A D   D   + T T  + + V D ND  P F ++ YE  I   E  P   ++   +A+D DS  NG++ Y      P N            V     G + V++ +++D   +   ++  + A D G  P  S  TV +R++DV+D  P+                 +P N S++   A +++V +    D+  G      L +       G         Y       D Q  ++   +  DRE     +  +  +DNP+      NP     +++I +V I DENDN P + +  YE +  EN P      V  G +  SD D G N      ++  S A+ L   + G + + L    DRE +    + +   V D GR N TV + V +LD ND  P F++ +   + +ENS    T V  V+A D+D  +   G + Y I S  +  F I+  +G+I     +D E +  Y + ++A D A
Sbjct: 1157 SVLIRITDENDNAPAFGAATYEVLLTEGPSTAGVAVANVTASDPDEGDNARVVYAIVSGNT---AATFGID---NGTGVLTAVKALDFEVSAGLYLLVVTATDQPRDPARRLTSTATVSVHVADVNDVTPWFLRS-YEGPIDVSEGQP-GPRIATFMASDQDSGLNGELEYSIIDGDPRNE----------FVISPADGDLRVRRYVELDRETQA-FYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVFL--------------NLPANASLSEAAAVLAIVSRVRASDANEGRNCAALLQHSPTSFCNG-----ERAFY------ADSQTGLVYVNRPLDRERVAEYRLTLTVRDNPD------NPSYARKDSDIMIVTILDENDNSPVFSQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAYFLIDRDRGNVSMALGQGLDREGIPGGRLELTILVQDGGRRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDTFGIDESTGLIVTVAPIDYETRPEYLLMVVATDQA 1693

HSP 5 Score: 129.413 bits (324), Expect = 3.511e-30
Identity = 168/640 (26.25%), Postives = 264/640 (41.25%), Query Frame = 3 
Query: 1089 SDYFLLHSS----YLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKP--SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENG--TITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVD--DGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPR--INRFDFMVSACDNGNSPR--CSRTTVTIRIIDVNDFRP-IITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQ----NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMI---NPSQAFELT-ESGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMI-RVTTKLDREEKEFYAIQILAIDN 2918
            S YF +  S     + + R++D E++   +      I   I+       P  S ++  + V D NDN+P F++      + EN  A  + LY+   +     E G  ++ Y L+       S  FR+     ++       LLD E    Y++ + AVD  DGN QKTG   + I + D NDN P +    Y  TI+EN P    +  + A D D +ENG + Y    P+         ++ I   SGK +    Q    DL P    +    +VS  D G+ PR   +  TVT+ + DVND  P  + + Y      G     +P NS    +  V+  D D G  G V   +T      +F+L                    D    +I  + + DRE     + +++  D        +    L++   + +++ D NDN P +  +       E+  R D   +    L  +D D G        I   N    F +    G +  V+S DRE   S  + I A     +  R   T +++V +LD ND  P+F   +Y  +  EN +    +  V+ATD D  I G + Y+I        F +N  SG+I R  T LDRE    +A+Q+ A +N
Sbjct:  177 SSYFSITVSGGYGVVTLARALDYEKIPGGT------ISLTIMALDGGSPPLNSTVTAIVEVFDENDNSPIFDRNSYSIAIPENILAGATVLYVNATDGDQSPEYGQLSLIYSLEG------STQFRINARSGDI---TSTTLLDREAVSQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTDIFTVSAADPDLNENGTLVYAIDPPN--------PFYRINAASGKIRTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVLEG-----LPANST---LFQVTATDPDEGANGNVTYSMTAALPRPDFQL--------------------DAATGLITTLVQLDREAVAAYQLRLVATD--------RGTPALSSTTTLSLVVLDVNDNAPTFHPARSAVSLMESVAR-DSVVIS---LNCTDADSGLNAELSFFITGGNQDGQFSVGFRDGLVRTVVSLDRETKASYSLVIEAIDNGPAGSRRTGTTTLDVLVLDVNDNRPLFLEGSYEVSVPENVTRGAIILQVQATDIDEGINGRVWYRIISGNQDGNFLVNVSSGLISRGATPLDRETVALHALQVEAFNN 753

HSP 6 Score: 118.627 bits (296), Expect = 5.934e-27
Identity = 135/563 (23.98%), Postives = 228/563 (40.50%), Query Frame = 3 
Query: 1185 ILRLILVYGRSK-KPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISP-DNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYE--NRPRNDEKRVKLG-ILEVSDKDLGNR---FYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVS---------------INVQILDENDLAPVFSLDTYRFN-CVENSFSTFVGHVEATDQDSDIYGPIEYKI 2801
            + R++ + G S  + +  ++S+ V D+NDN P F  P    V V    A  + +    A D D   NG +T++++           +L I P D + R+     +D E R  Y + ++AVD GNP  +G+  +++ V D ND  P F   +   +++E++ V   V  + AT+     N K  Y+ A    N   +     G+VT +   K Y              RF+    A D+G  P   +  + + ++DVND RP+  +    N    + +  +P   +   I  V  VD D G  G V     +       G  D ES   +R+N  S      II   +  DRE        ++  D          P+   +   + V++DD +DN P ++  P     Y+  + P +      +G +    D D+G     +Y     N    F L+  G L ++   DRE      + + AS S+  +   V+               + V + D ND  PVF+   Y     V+    + +  +EA D+D      + Y+I
Sbjct: 1920 LFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFRIESGGGD------KLSIGPSDGIIRVAPGANIDRETRAAYTLMVVAVDRGNPPLSGSAIVRVLVDDVNDERPAFLAPVQTVSVLESLSVGSFVATVKATENYKGHNTKYTYKIAGIGKNAFTVHATS-GLVTSTRLLKSY-------------ERFNLTAVATDHGRPPLWGQAGLYVEVLDVNDHRPVFVLP--PNGTVVNITEVMP---VVIRIVEVLAVDGDEGQNGAVRYSFLHAGG---VGSRDWES---FRINATSG-----IISTARALDRESQAVYSLILLASD-------QGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFSIPEHSPPGTAVGNVSGAVDADVGANAIVYYFIAAGNEGNKFNLSRWGLLVVLSDLDREVSPYYAIIVKAS-SNPNWTPAVTTGPEFDPSKDRTLREVRVYLEDINDQWPVFTNHEYTAGVAVDAKVGSELLQLEAVDRDVGNNSIVLYRI 2438

HSP 7 Score: 114.775 bits (286), Expect = 1.004e-25
Identity = 169/620 (27.26%), Postives = 256/620 (41.29%), Query Frame = 3 
Query: 1563 GTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKE-KVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPR---CSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRN---DEKRVKLGI---LEVSDKDLGNRFYHKLMINPS------QAFEL-TESGELFLVLSFDREAMESNPVRIFASVSD-------GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-----FSTFVGHVEATDQDSDIYGPIEYK-ISLPSPLFSINSKSGMIRVTT--KLDREE--KEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLK--ENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFEN 3314
             T  + IR+ DENDN P F  A YE  + E        V  + A+D D  +N +V Y  A+ S N        FGI  ++G G +   + LD +++  +  +  +V+A D    P     S  TV++ + DVND  P    +Y    G  D S   P   I  ++A+    D+DSG            N EL   I D +  N + ++    D +   ++   E DRE        I+ KD          P+  T    + VL  D +DN P +L          N P N    E    L I   +  SD + G      L  +P+      +AF   +++G +++    DRE +     R+  +V D        R +  + I V ILDEND +PVFS  TY     ENS      +   G + A+D D  +   + Y  +   S  F I+   G + +     LDRE        + IL  D         R  T  + VTVLD+NDN P       Q   V++++  +G  V  ++A D DL   + G+V Y I   G + F ID  +G   IV    +         L++VA+D     P     S ++R+  +N
Sbjct: 1154 ATTSVLIRITDENDNAPAFGAATYEVLLTEGPSTAGVAVANVTASDPDEGDNARVVY--AIVSGNTAAT----FGI--DNGTGVLTAVKALDFEVSAGL--YLLVVTATDQPRDPARRLTSTATVSVHVADVNDVTPWFLRSY---EGPIDVSEGQPGPRIATFMAS----DQDSG-----------LNGELEYSIIDGDPRNEFVISPADGDLR---VRRYVELDRETQAFYNLTIMAKD------MGTPPLNSTLTVGVRVL--DVHDNDPVFL----------NLPANASLSEAAAVLAIVSRVRASDANEGRNCAALLQHSPTSFCNGERAFYADSQTGLVYVNRPLDRERVAE--YRLTLTVRDNPDNPSYARKDSDIMI-VTILDENDNSPVFSQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAYFLIDRDRGNVSMALGQGLDREGIPGGRLELTILVQDGGR------RNATVRLGVTVLDVNDNTPTFNV-TSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDTFGIDESTG--LIVTVAPIDYETRPEYLLMVVATDQA---PPFHTASCELRVSLQN 1709

HSP 8 Score: 105.531 bits (262), Expect = 6.664e-23
Identity = 164/669 (24.51%), Postives = 272/669 (40.66%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDY--EVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLF-EKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSP--YEFKSYENRPRNDEKRVKLGILEV--SDKDLGN------RFYHKLMINPS--QAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGR---YNQTVSINVQILDENDLAPVF------SLDTYRFNCVENS-FSTFVGHVE-ATDQDSDIYGPIEYKISLPSPLFSIN-SKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXX---------XXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK 3134
            V + V D NDN+P+F       V V  + A  + L +  A D D   NGT++ +   +        + L I  ++   ++ +   D+  +  +F +  ++A+D G+P ++ T  + + V D NDN+P+F     Y  +++E       V  + ATDAD+  NG+V +R  + S    +L+            G I V    +ID   R   +  MV A D GN P      V + + DVND RP       T        S +   S+ +++A V   +   G       + T   ++ I GI      N + V+  S    +   + +K ++R          +  D      + + P  L  +A + V + D ND+ P ++  P        E  P      V + I+EV   D D G        F H   +     ++F +   SG +    + DRE+     + + AS   G+   Y  T  + V + D +D  PVF            F+  E+S   T VG+V  A D D      + Y I+  +     N S+ G++ V + LDRE   +YAI + A  N N                     V V + D+ND +P          V +D+   +G ++  +EA D D+  N  V Y+I+ 
Sbjct: 1825 VYVNVTDENDNSPEFEAGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFR--IESGGGDKLSIG-------PSDGIIRVAPGANIDRETRA-AYTLMVVAVDRGNPPLSGSAIVRVLVDDVNDERPAFLAPVQT-------VSVLESLSVGSFVATVKATENYKG-------HNTKYTYK-IAGIGK----NAFTVHATS--GLVTSTRLLKSYER-----FNLTAVATD------HGRPP--LWGQAGLYVEVLDVNDHRPVFVLPPNGTVVNITEVMP------VVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSGIISTARALDRESQAVYSLILLAS-DQGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFSIPEHSPPGTAVGNVSGAVDADVGANAIVYYFIAAGNEGNKFNLSRWGLLVVLSDLDREVSPYYAIIVKASSNPNWTPAVTTGPEFDPSKDRTLREVRVYLEDINDQWPVFTNHEYTAGVAVDAK--VGSELLQLEAVDRDVGNNSIVLYRILS 2440

HSP 9 Score: 102.449 bits (254), Expect = 5.925e-22
Identity = 185/806 (22.95%), Postives = 310/806 (38.46%), Query Frame = 3 
Query: 1086 TSDYFLL----HSSYLKVKRSIDREEVCSKSSKNNDCILRL-ILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQ--ENGTITYKLQENKDFIF----SQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALP-----------SNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDE----SSTIPE----NSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKN----------IKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGI-------LEVSDKDLG----------NRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQIL--DENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKIS-LPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG------FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            +S YFL+     +  + + + +DRE +           L L ILV    ++ + + + +TV D+NDNTP FN       V+EN+ A  + + + +A D D    + GT+ Y +    +  F    S    + ++P           +DYE R  Y++ ++A D   P  T + ++++ +Q+E D    F  A Y+  + E       V+ + A         K   +  LP             ++QQ + N   I     +G+I  +  LD + T       +M++       PR +   +T      N     + VN    N +  E    S+T+ E     +    +  +   D+D+G  G V           I                    Q I II+N            +F  + +  I F+I+  D          P   T    ++VL  D NDN P +L SP  +             V+LG        +  +D D G          +    KL I PS        G      + DRE   +  + + A V  G    + S  V++L  D ND  P F       + +E+ S  +FV  V+AT+          YKI+ +    F++++ SG++  T  L   E+  + +  +A D+      G+      V    LD+ND+ P    PP   +V I    P+  ++  + A D D  +NG+V Y  +  G      +  F I++ SG   I    +L         L+L+ASD G P    S   +Q+ L
Sbjct: 1547 SSAYFLIDRDRGNVSMALGQGLDREGIPGGR-------LELTILVQDGGRRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDTFGIDESTGLIVTVAP-----------IDYETRPEYLLMVVATDQAPPFHTASCELRVSLQNELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQM------KAPPKLPLPLAILVQKWHEDKRHKQQESDNAELIAAL--QGEITTQAALDREATD-----SYMLTVLSRDGGPREAIAVLT------NKPGAYVYVNVTDENDNSPEFEAGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIP------------------PQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDG------GSPPRSTTFNLSVIVL--DVNDNVPIFL-SPGGYAV---------SVVELGAPGTLVASVWATDADAGPNGQVTFRIESGGGDKLSIGPSDGIIRVAPGA-----NIDRETRAAYTLMVVA-VDRGNPPLSGSAIVRVLVDDVNDERPAFLAPVQTVSVLESLSVGSFVATVKATENYKGHNTKYTYKIAGIGKNAFTVHATSGLVTSTRLLKSYER--FNLTAVATDHGRPPLWGQAGLYVEV----LDVNDHRPVFVLPPNGTVVNITEVMPVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSG--IISTARALDRESQAVYSLILLASDQGQPVSYESTQPLQVVL 2265

HSP 10 Score: 100.908 bits (250), Expect = 1.449e-21
Identity = 193/780 (24.74%), Postives = 313/780 (40.13%), Query Frame = 3 
Query: 1041 SEMLQTLRLSNMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVY-------GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA-NARLSDLY---LYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMEL-LAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIP-VKEKVIEIVATDADSD--ENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNE--AEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGN-------RFYHKLMINPSQAFELT--ESGELFLVLSFDREAMESNPVRIFASVS-DGR---YNQTVSINVQILDENDLAPVF-SLDTYRFNCVE-NSFSTFVGHVEATDQDSDIYGPIEYKI-SLPSPLFSINSKSGMIRVT--TKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSH----LVLVASDNGIP 3263
            + +LQ    S  N + + Y    +  + V R +DRE V            RL L           ++K S I + +T+ D NDN+P F+Q   E  + EN+ N  +  +    +Y A D D   N T+ Y L        S +F +     NV   +   L D E      +EL + V DG  ++  T+++ + V D NDN P F        ++EN P V   VI + A D D    + G V Y  A   N+        FGI  +   G I     +D +  P    +  MV A D   +P     +  +R+   N+    ++ +         E++ +P       +  V+     + P   +   +  Q +   +    +ES N   +     +     I      DRE  D     ++ +D        +    LTN+  A + V + DENDN PE+          E R  +      L +L  +D+D G+          H     P Q   +   ESG   + ++      +++   +F  V+ DG     + T +++V +LD ND  P+F S   Y  + VE  +  T V  V ATD D+   G + ++I S      SI    G+IRV     +DRE +  Y + ++A+D  N    G       V     D+ND  P   F  P + V +  +  +G  V T++A +     N   +YKI   G N F++ + SG         ++  +L  S+    L  VA+D+G P
Sbjct: 1423 AALLQHSPTSFCNGERAFYADSQTGLVYVNRPLDRERVAE---------YRLTLTVRDNPDNPSYARKDSDIMI-VTILDENDNSPVFSQVTYEAEIPENSPNGTVLTVLNGPIY-ASDADFGVNATLAYSLLGGS----SAYFLIDRDRGNVSMALGQGL-DREGIPGGRLELTILVQDGG-RRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDT-------FGI--DESTGLIVTVAPIDYETRPE---YLLMVVATDQ--APPFHTASCELRVSLQNELDEKLSFSLAAYQAALSEAA-VP----GTVVVRVAAPQMKAPPKLPLPLAILVQKWHEDKRHKQQESDNAELIAALQGE-----ITTQAALDREATDSYMLTVLSRDG----GPREAIAVLTNKPGAYVYVNVTDENDNSPEFEAGSATL--VEVR-ESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFRIESGGGDKLSIGPSDGIIRVAPGANIDRETRAAYTLMVVAVDRGNPPLSGSAIVRVLVD----DVNDERP--AFLAPVQTVSVLESLSVGSFVATVKATENYKGHNTKYTYKIAGIGKNAFTVHATSG--------LVTSTRLLKSYERFNLTAVATDHGRP 2140

HSP 11 Score: 83.9593 bits (206), Expect = 2.041e-16
Identity = 157/680 (23.09%), Postives = 261/680 (38.38%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQEN---KDFIFSQFFRLQISP-DNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRT---TVTIRIIDVNDFRPIIT-VNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNL------YRVNDKSQDQQIYIIKNIKEFDREE--NDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG----NRFYHKLMINPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSDGR----YNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKISLPSPLFS-------------------INSKSGMIRVTTKLDREEKEFYAIQILAIDNA--NXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYK 3125
            S  +VS+ V D+ND TP F +     + V         +  + A D D   NG + Y + +     +F+        ISP D   R+ +   LD E + FY + ++A D G P    TL + +RV D +DN P+F       ++ E   V   V  + A+DA+   N       AL  ++             +S  G +YV + LD +   R+  +   ++  DN ++P  +R     + + I+D ND  P+ + V Y          + IPENS N  +  V      +GP      Y ++ +F    G+N   + +L      Y + D+ +      +   +  DRE      ++  I+ +D     R N           + V + D NDN P +  +       EN P      +   +++  D+DLG        + +    +  F + ES G +  V   D    E+ P  +   V+  +    +  +  + V + +E D    FSL  Y+    E +   T V  V A    +        K+ LP  +                     I +  G I     LDRE  + Y + +L+ D                 V V V D NDN P+ +      + V +S  P G  +  + A D D   NG+VS +
Sbjct: 1264 STATVSVHVADVNDVTPWFLRSYEGPIDVSEGQPG-PRIATFMASDQDSGLNGELEYSIIDGDPRNEFV--------ISPADGDLRVRRYVELDRETQAFYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVFLNLPANASLSEAAAVLAIVSRVRASDANEGRNCA-----ALLQHSPTSFCNGERAFYADSQTGLVYVNRPLDRE---RVAEYRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSPVFSQVTY---------EAEIPENSPNGTVLTVL-----NGP-----IYASDADF----GVNATLAYSLLGGSSAYFLIDRDRGNVSMALG--QGLDREGIPGGRLELTILVQDG---GRRNAT-------VRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVI---VVKAMDRDLGVCDAGTVRYSIASGGNDTFGIDESTGLIVTVAPID---YETRPEYLLMVVATDQAPPFHTASCELRVSLQNELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQMKA------PPKLPLPLAILVQKWHEDKRHKQQESDNAELIAALQGEITTQAALDREATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEFEAGSATLVEVRESAAP-GTLLTVLHATDRDAGSNGTVSAR 1878
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BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: si:ch211-199f5.1 (protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660])

HSP 1 Score: 144.436 bits (363), Expect = 2.705e-35
Identity = 169/661 (25.57%), Postives = 275/661 (41.60%), Query Frame = 3 
Query:  969 NVHFVTTEELHPNSLIG----DLKPYLSSEMLQTLRLSNMNFKTSDYFLLH----SSYLKVKRSIDREEVCSKSSKNNDCILRL-ILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQ-NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRN---------DEKRVKLGILE---VSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDG----RYNQTVSINVQILDENDLAPVFSLDTYRFNCV------ENSFSTFVGHVEATDQDSDIYGPIEYKISLPSP--LFSINSKSGMI 2849
             V +   EE    +L+G    DL+  ++    +  RL     +  D+ L+H       +  +  IDRE+ C ++     C++R  +L          +   + + DIND+ P F + E+ HV +  + A  + + L  A D D   N    Y L EN+ F  +   R +        L+    LD E    Y ++L A D G+P ++GT  ++I V D NDN P+F +     T+ E+      ++ + ATD D   NG+V Y F+ P + + +     F +  +   GK+ +K +LD +L    + ++  + A D G S   +   V + + D+ND  P I +++I  +  GD        +  +++  V+V D DS   G+V C+L    +F+L+   +D                  Y++      DRE+       +   D     R            +  V + DENDN P + +S YE    EN             D      G++    V  +  G      + INPS       SG ++ +   D EAM S   ++ A   DG      N TVS  V+I+DEND APV +    R          +      V  V A D DS+  G + Y+I   +   LF IN   G +
Sbjct:   30 TVKYALYEEQPAGTLVGRLSDDLQGRVAEHPSRHFRL----MRRDDFSLVHVEEADGTVSAREVIDREQQCGQAPS---CVIRFDVLCTLPRGLFQLVHAEVELLDINDHAPDFARSEM-HVEISESVALGTRVPLEGARDLDVGGNALRAYHLDENERFGLA--LRARTDGAKYAELVVKSRLDREQEGEYTLQLTAWDGGDPPRSGTTLVRITVLDSNDNSPVFAQTSCNVTVREDATPGTVLLTLNATDVDEGPNGEVVYSFSSPVDAEVR---RLFQL--DPKTGKLSLKGQLDHELN---SEYEISIQARDMGPSSIPAHCKVLVHVEDINDNAPEIKLDFIMQS-RGDTVFVSEGAAYESFVGLVTVSDIDSAENGLVACHLRGHPHFKLLPYRDD------------------YVVVTNSSLDREQMADYFLVLEASDGGTPPR--------VAARQFTVRLLDENDNEPRFHRSTYEASLLENNSPGAYVTTVTAWDADAEHNGMIAYNVVESEVAGASVSTYVSINPS-------SGAIYALRPLDYEAMTSLTFQVQAR-DDGVPPLVTNATVS--VRIVDENDNAPVVTHPPLRNGTGVVRLPRDAGLGYLVTVVRARDSDSEANGELSYRIVQGNERNLFRINRLGGEV 635

HSP 2 Score: 105.916 bits (263), Expect = 2.464e-23
Identity = 154/607 (25.37%), Postives = 255/607 (42.01%), Query Frame = 3 
Query: 1569 LKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGK-GKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSI-NNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVK--------LGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVL---SFDREAMESNPVRIFASVSDGRYNQTVS---INVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKI-------SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ---KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSH-LVLVASDNGIPTPKSSAVSVQIRL 3302
            +  ++ + D ND+ P F ++     I E++ +  +V    A D D   N    Y   L  N +  LA       T+  K  ++ VK +LD +   +   +   ++A D G+ PR   T V I ++D ND  P+              + T+ E++     +  ++  D D GP G V    ++          D E   L++++ K+    +       + D E N   +  I  +D          P  +    +++V ++D NDN PE +K  +  +S     R D   V         +G++ VSD D          +     F+L    + ++V+   S DRE M    + + AS  DG     V+     V++LDEND  P F   TY  + +EN S   +V  V A D D++  G I Y +       +  S   SIN  SG I     LD E       Q+ A D+             TVSV ++D NDN P +  PP +    +V +  +  +G+ V  + A D D + NG +SY+I++    NLF I+   G +F             + H LV++  D G P   ++A +++IR+
Sbjct:  120 VHAEVELLDINDHAPDFARSEMHVEISESVALGTRVPLEGARDLDVGGNALRAYH--LDENERFGLALRAR---TDGAKYAELVVKSRLDRE---QEGEYTLQLTAWDGGDPPRSGTTLVRITVLDSNDNSPVFAQTSC--------NVTVREDATPGTVLLTLNATDVDEGPNGEVVYSFSSPV--------DAEVRRLFQLDPKTGKLSLK-----GQLDHELNSEYEISIQARD--------MGPSSIPAHCKVLVHVEDINDNAPE-IKLDFIMQS-----RGDTVFVSEGAAYESFVGLVTVSDIDSAENGLVACHLRGHPHFKLLPYRDDYVVVTNSSLDREQMADYFLVLEAS--DGGTPPRVAARQFTVRLLDENDNEPRFHRSTYEASLLENNSPGAYVTTVTAWDADAEHNGMIAYNVVESEVAGASVSTYVSINPSSGAIYALRPLDYEAMTSLTFQVQARDDG----VPPLVTNATVSVRIVDENDNAPVVTHPPLRNGTGVVRLPRDAGLGYLVTVVRARDSDSEANGELSYRIVQGNERNLFRINRLGGEVFTNAASVTDAAASATRHSLVVMVRDRGSPALSATA-AIEIRV 676
[Close]
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 142.124 bits (357), Expect = 4.363e-34
Identity = 189/721 (26.21%), Postives = 303/721 (42.02%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDG-NPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKL-----DIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRF---YHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSDGRYNQ--TVSINVQILDENDLAPVFSLDTYRFNCVENSFSTF-VGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPK-------IKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIV-------VKHSLSENQLTSSHLVLVASDNGIPTPKSSA-VSVQIRLPFEN 3314
            +V++ V D NDN P+F   E+   V E+A    SD+ L  A D D   N  I+Y+L+   D  FS      ++P +  +++    LD E R+ Y++E+ A+D G  P  + +  + + V D ND+ P F  A Y      + P    V  + A DAD+  NG  + RF+L  +          G   +  +G I+  + L     D+ LT R++         D G  PR + TTVT+R  D  +F P       + +   D+    P  +    +AA S   + +GP           ++ L  G N  +   ++ V+ +S +  ++     +  D E   H +  +  +D      +   P     + E+ VL  D NDN PE+  S +  K  EN P        + +L   DKD G      Y  +  N    F +   SGE+  V + DRE + S  + + A+   G   Q  TV + + + DEND +P F+   +  +  E++   F V  V   D D      I + +  PS  FSI+  +G I V+ +L+RE++  YA+++ A D A                   D+NDN P+       I+FP P +   +         V  + A D D   NG V +  ++     F +   SG +  V            S   L     V+ A D G P   S A V++ I +P  N
Sbjct:   11 TVTVLVEDENDNLPRFGAAELRAAVPEDAPIG-SDVALVNATDADAGLNAIISYRLR-GGDGHFS------VNP-STGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNG--DLRFSLSGSASA-------GFSVDPRRGVIHAARALQGPRDDLTLTVRVS---------DGGAPPRSAVTTVTVRFRDAGEF-PRFAPGPRSFSFREDQ----PPGTTITVVAARS--SRRAGP----------VSYHLASGGNLGD---VFAVDPQSGEVSVH-----RALDHEYQHHYELVVEARD------SGFPPFSAYLKLEVDVL--DINDNAPEFSSSRFWAKVPENTPPR-----TIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKAT-DRGSPTQHCTVKVLISVTDENDNSPRFT-QIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTDVTIVVD-------DVNDNAPRFGQTAYYIEFPEPSEGEAL---------VARVSASDADDGANGQV-FFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNAN 647

HSP 2 Score: 130.568 bits (327), Expect = 1.589e-30
Identity = 184/738 (24.93%), Postives = 295/738 (39.97%), Query Frame = 3 
Query: 1194 LILVYGRSKKPSFISVSITVNDI--NDNTPKFNQPEIEHVVVEN--ANARLSDLYLYEAEDPDRQENGTITYKLQENK-----DFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG---NRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSD---GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKI-------SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKEN-GSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL--PFENPSE 3323
            ++    R + P     ++T+N +  N N P+F +      V     A  R+ D+    A DPDR  NG I Y +         D     F  L+ S            L  +    + + + A D G P  +      I V +EN   P F     E ++ EN P    +  + ATD D+  NG + Y  A  S +   L    F I   SG   + +  +LD + T ++  ++  V A D G   +   + V+I + DVND  P++  +        D    IPEN+ +   +  +  VD DS P   V  Y           ++D E+ +L+ +N     Q+  ++      D E     +  +   + P+    +         A++ V I   N+  P +++  Y F   E+ P        +G +  +D+D G     FY     + S+ F + E +GE+ +    DRE   S  +R+ A  +    G     V +NV I D ND  PVFS   Y     E  S  T V  V A D DS    P  ++              FSIN+ +G+I V + LDRE    Y + ++A+D       G       +     D+NDN P +          +  N P G  V  +EA DPDL  N G  +++++          S S +  +     +   Q    HL +  +D G P P +S V++ + +    +NPSE
Sbjct:  620 VVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDM---SAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRAS------------LAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIA--SGDGSGL----FDISRASGD--VLLVGELDYE-TEKL--YNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNAS--------DYYPVIPENAPSGTTVLVMDAVDADS-PSNAVTMY----------SLDDGEA-DLFVLN-----QKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYST--------AQVHVQITGVNEYFPRFVQREYNFVVSESAPVG----APVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDS----PPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALE----DVNDNGPFLL----TSSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSP-PLTSTVTLHLSVLDQNDNPSE 1280

HSP 3 Score: 130.183 bits (326), Expect = 1.774e-30
Identity = 172/675 (25.48%), Postives = 280/675 (41.48%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTT-VTIRIIDVNDFRPII--TVNYITNNGHGDESSTIPENSINNYIAA-VSVVDKDSGPGGIVECYLTNQ--NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS----DKDL-GNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGR------YNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISL--PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIK----FPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNL 3179
            +++ + + V DINDN P+F+       V EN   R   + +  A D D   NG + Y + +         FR+     N   +  +  LD E    Y + + A D G+P +  T+K+ I V DENDN P F + ++   + E+  V   V+ +   DAD   N  + +    PS                   G+I V ++L+     R +R  + V      + P  + +T VTI + DVND  P    T  YI            PE S    + A VS  D D G  G V  ++ +Q  NF + +   +  S+   R  D +         N+ ++         F +   D        + P  L+++A + + I   N N P +L+  Y      + P     R    IL++S    D+D+ G   Y  +  N S+ F++   G L L     R ++  +   IF+   + R       +   +  + + +EN  AP F+      +  EN    + +  V ATD D+ + G I Y I+    S LF I+  SG + +  +LD E ++ Y + + A D         +T  + VS++V D+NDN P +     +P      VI  N P G  V  M+A D D   N    Y +     +LF ++ K+G L
Sbjct:  318 AYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRT--IVVLTAVDKDSGINGQVDYSIIDGN---IGNVFRVN---PNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQ-IFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPS----------LPFSIHPSTGEITVSRRLN-----REDRSGYAVKV--RASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYI----------EFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGS---GANLNKY--------SFVVTAMD------RGRPP--LSSDATVTINIVVPNANAPRFLRERY------STPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHL-----RASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGG----WQAKTECSGVSISVTDVNDNPPMLNASDYYP------VIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVL 916

HSP 4 Score: 109.383 bits (272), Expect = 3.991e-24
Identity = 160/715 (22.38%), Postives = 288/715 (40.28%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKF-NQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLG-NRFYHKLMINPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEF---------YAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKI---KFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFEN 3314
            S  ++ + V D+ND+TP+F N P + +    ++    + ++   A D D   NG + + L  +    FS   R  +   +  R +Q        R    + +   D G P ++    + +R +D  +  P F       +  E+ P    +  + A    S   G V+Y  A   N       + F +  +S  G++ V + LD +     + ++ +V A D+G  P  +   + + ++D+ND  P  + +           + +PEN+    I  ++ VDKDSG  G V+  + + N             N++RVN  S +     I+++   DRE     +  +   D         +P Q     ++++ + DENDN P + +    F ++      ++  V   +L VS  D D G N      +++PS  F +  S GE+ +    +RE      V++ A  SD  +  +  + + + D ND AP F    Y     E S     V  V A+D D    G + + +   +  F +   SG I     L   +            Y+  + A+D          T T  + V     N N P+    ++  P    V       G ++  M A DPD   NG ++Y ++  +    F +D+     F+ ++ SL+ +  +   + + A D G P P SS  +  I +  EN
Sbjct:  112 SSATLVVAVTDVNDHTPRFLNAPYVAY--APSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVI--HAARALQ------GPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAAR--SSRRAGPVSYHLASGGNLG-----DVFAVDPQS--GEVSVHRALDHEYQ---HHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFW--------AKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIG-----------NVFRVNPNSGE-----IRSVSTLDRENVASYELTVKATD-------RGSPTQHCT-VKVLISVTDENDNSPRFTQI---FSAHV----REDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRA--SDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVP----NANAPRFLRERYSTPVAATVR-----AGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGG---FLHLRASLAGDAGSIFSVTVEARDRGRP-PLSSRATAIISVTEEN 749

HSP 5 Score: 102.449 bits (254), Expect = 5.284e-22
Identity = 162/714 (22.69%), Postives = 280/714 (39.22%), Query Frame = 3 
Query: 1212 RSKKPSFI---SVSITVNDINDNTPKFNQPE--IEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKF------YMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA--FELTESGELFLVLSF-DREAMESNPVRIFA-SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG--FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSV 3290
            R+  P++     V+I V+D+NDN P+F Q    IE        A ++ +    A D D   NG + + ++       ++ FR+      +  +  L   D            Y   + A+D G P  +    + I +   N N P F +  Y   +   +    +++++ A D D D NG++ Y   +  N  ++   +  G         ++++  L  D     + F   V A D G  P  SR T  I + + N + P           H     ++PEN    + +A V+  D D+G            N  ++  I   +   L+ ++  S D  +     + E D E         +C  +   Q         T  + + + + D NDNPP    S Y    Y   P N      + +++  D D  +       ++  +A  F L +   +     F D E  ++  + + A +  D  +  T  ++VQI   N+  P F    Y F   E++     VG V ATD+D+ I G + Y +     S  FS+N  +G I V+++LDRE +    ++++A +  + R          V++T  D ND  P + F        +     +G  V  + A D D          +I+ G     FSI++ +G   IVV   L    +   +L +VA D G P    + V V
Sbjct:  513 RASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARV---SASDADDGANGQVFFFMRSQ-----TENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSV-VGGNASRRFDVDAGGF--------LHLRASLAGDAG---SIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFA--------HPPLELSLPENHPAGSSLARVTATDTDAG-----------VNGAIVYSIASGDGSGLFDISRASGDVLL-----VGELDYETEKLYNLS-VCAADGGWQAK-------TECSGVSISVTDVNDNPPMLNASDY----YPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAIT--DAND--PPV-FSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTG--LIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVV 1163

HSP 6 Score: 98.5969 bits (244), Expect = 8.477e-21
Identity = 138/579 (23.83%), Postives = 229/579 (39.55%), Query Frame = 3 
Query: 1545 GNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFM--VSACDNGNSPRCSRT-TVTIRIIDVNDFRP-IITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYH-KLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVV-IDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASD 3251
            G P+ TGT  + + V+DENDNLP F  A     + E+ P+   V  + ATDAD+  N  ++YR         +    +F +      G+I     LD     R  R  ++  V+A D G +P  S + T+ + + DVND  P  +   Y+         S+ P  +    + AV+  D D+GP           N +L   ++   S         S D +  +I   +      +D +   +   D     R+            + V   D  +  P +   P  F   E++P      V   +   S +  G   YH     N    F +  +SGE+ +  + D E      + + A  S    ++  + + V +LD ND AP FS   +     EN+    +  + A D+DS I G ++Y I       +F +N  SG IR  + LDRE    Y + + A D  +  +        +V+    D NDN P+      Q     +  +  +G  V  +   D D   N ++++ ++      FSI   +G   I V   L+    +   + + ASD
Sbjct:    2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL--------RGGDGHFSV--NPSTGQIITTASLD-----REGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAY-----APSSAPAGTA---VFAVTARDADAGP-----------NGDLRFSLSGSASAGF------SVDPRRGVIHAARALQGPRDD-LTLTVRVSDGGAPPRSAVT--------TVTVRFRDAGEF-PRFAPGPRSFSFREDQPPGTTITV---VAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVT----DENDNSPRFT----QIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP-FSIHPSTGE--ITVSRRLNREDRSGYAVKVRASD 516

HSP 7 Score: 85.5001 bits (210), Expect = 7.392e-17
Identity = 66/228 (28.95%), Postives = 104/228 (45.61%), Query Frame = 3 
Query: 2622 RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            R   T ++ V + DEND  P F     R    E++   + V  V ATD D+ +   I Y++      FS+N  +G I  T  LDRE +E Y +++ A+D          + + T+ V V D+ND+ P+    P   +    S+ P G  VF + A D D   NG + + +       FS+D + G +          + LT   L +  SD G P P+S+  +V +R 
Sbjct:    5 RLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQIITTASLDREGRESYVLEVTALDGG---PTPGLSSSATLVVAVTDVNDHTPRFLNAP--YVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPRDDLT---LTVRVSDGGAP-PRSAVTTVTVRF 223
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4])

HSP 1 Score: 186.422 bits (472), Expect = 2.038e-47
Identity = 201/709 (28.35%), Postives = 315/709 (44.43%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYL-YEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLGNRFYHKLMINPS---QAFELTESGELFLVLSFDREAMESNPVRIFA-SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK--DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            G      ++ ++I V D+NDN P F +      + E+ +  + D  L   A D D   NG + Y +  N D   S F   ++S      +  +  LD E    Y +++ A D GNP ++ T+ +KI + D ND  P F K +Y  TI E++PV + V  + ATD D   NG+V   F + S N      N+F I      G++ VKQKLD ++   I  F+ +V+A D G     ++TTV I +IDVND  P    ++          + IPEN ++      V   DKD G  G +        F  +Q  ND      + +N+ +    I      +E DRE+     F I  +D          P +    A+I + + D NDNPP++ +  Y     EN       R    +L+V   D D G       +++ S   + F +   G + L  + +     +  V +F+ S SDG  + T  + V + D N  AP F   +Y     E+ S  T V  V ATD+D+     I Y I+   P FS++  +G+I+    LDRE+ + Y  ++ A D+       +    + V + + D+NDN P   F  P     +  +   G +V  + A D D+ +N  + Y      DG   F+IDS  G   I     L    +    L +VA+D G P P  ++V V++ L
Sbjct:  104 GEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKS--IGDFVLAVRASDADSGSNGEVKYCIL-NSDGDNSAFSIGEVSG----AVTVMKKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEV--FFEIVSGNDM----NFFSI--NRINGEVRVKQKLDYEM---IGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHF--------QTMIPENYAVGQEFYRVQAYDKDHGTNGEI-------TFSFMQ--NDLP----FSINENTGGISIK-----EELDREKVPKFTFGIKARD-------KGVPFK-EGTAQITITLLDINDNPPKFSQEEYHTSIAEN------SRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQGLITLSCTLN---YNTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHG----IPQLKAKSFVYIHIADVNDNDP--VFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQG--IIRTLKPLDRETIPEYELTVVATDQGTP-PGQASVKVKVIL 742

HSP 2 Score: 147.132 bits (370), Expect = 2.568e-35
Identity = 188/688 (27.33%), Postives = 295/688 (42.88%), Query Frame = 3 
Query: 1263 NDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQ--LTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDE-KRVKLGILEVSDKDLG--NRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSDGRYNQ-TVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSP-----LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSA 3281
             +N P+F++ + +  V E+A    + +    A DPD   NG I Y +  +++ + + +F +    D +  ++     LD E    +   + A D G P   G + + I V D NDN P+FE+ +Y   I E+  + + V+ + A+DADS  NG+V Y       +    +    G V+    G + V +KLD +  P    +   V A D GN PR +  TV I ++DVND  P  +            S+TI E+  +N  +  V   D D G  G V        FE++ G ND    ++ R+N + + +Q    + I  F                  NL    Q+  Q  L N+  + + + D NDN P+++ S ++    EN     E  RV     +  DKD G         M N    F + E +G + +    DRE +      I A      + + T  I + +LD ND  P FS + Y  +  ENS + T V  V+A D DS   GP     S+ S       F IN + G+I ++  L+   K  Y   + A D          + T  V V V D N + P+ K       V  D++  +G  V T+ A D D   N  +SY I       FS+D  +G   I    SL   ++ +    + A+D+GIP  K+ +
Sbjct:   14 TNNPPQFSRLQEDASVSEDAEVG-TVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSI----DQITGVITTKRGLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFS---IGEVS----GAVTVMKKLDREKVP---TYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVY--------SATIREDVPVNQLVTTVRATDCDQGSNGEV-------FFEIVSG-NDMNFFSINRINGEVRVKQKLDYEMIGVF------------------NLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRV-----QAYDKDHGTNGEITFSFMQN-DLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDS---GPTNVVYSIVSSSGHDRCFRINPQ-GLITLSCTLNYNTKHVYVFSVSASDG-------MLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDAS--LGTSVLTVLATDRDTGSNAKISYSIATL-VPEFSVDETTG--VIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKS 630

HSP 3 Score: 75.485 bits (184), Expect = 1.365e-13
Identity = 76/253 (30.04%), Postives = 116/253 (45.85%), Query Frame = 3 
Query: 1218 KKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDAD-SDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPII 1967
            K  SF+ + I   D+NDN P F +P  E  V E+     R+ ++    A D D  +N  I Y    N D    Q      S   + R ++   LD E    Y + ++A D G P    ++K+K+ ++D  D+ PLFEK LYE T+ E+ P +  VI + A   D S E G +   +++   N  Q+    F I      G I    KLD +     + +   V A     SP  + TTV + + D+ND  P++
Sbjct:  627 KAKSFVYIHIA--DVNDNDPVFLKPSYEAKVREDIRPGGRVIEV---SASDADIGKNAQIIYSFASNGD---GQGTFTIDSTQGIIRTLKP--LDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMM---YSIVRGNSPQV----FDI--NPNTGAIQTLMKLDYETQ---SEYRLTVRA---TLSPFFTETTVMVYLKDINDNTPVL 854
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9])

HSP 1 Score: 178.718 bits (452), Expect = 4.081e-45
Identity = 203/700 (29.00%), Postives = 299/700 (42.71%), Query Frame = 3 
Query: 1233 ISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL---LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRF---ALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT-ESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVS--INVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSP----LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL-FSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            ISV + V+DINDN P+F        + E+ +   ++  +  A DPD   NGT+ Y +    +   +  F L  +       + +     LD E   FY + + A D G P   G   I I + DEND+ P+F +  Y  +I EN      ++ + A D DS  NG + Y     A+ SN+   L         +S  G I  KQ LD ++    N + F V A D G   +    TVTI ++D ND  P + + Y+    H  + +   ENS IN  IA + V DKDS      E  +TN + E   G    E L              Y I+  K  DRE        ++   N  L   ++     +    +++ + D NDN P +  + Y     E   +N    ++L   +  + D G   Y     N    F++  +SG +      DRE + S  + I A    G   +T S  + V I+D ND  P F   +Y+    E  S    V  V ATD DS   G I Y+IS        LF +N+++G++   ++LDRE K  Y+  +LA D+ + +         T+S    D+NDN P   F P +    I  N P G K+  + A D D   N  +SY II    N  FSIDS +G   I    SL         L++ A D G      +AV
Sbjct:   79 ISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNP-INTATDPDAGNNGTVDYTIASGDN---TATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDL---------DSSTGVIRTKQNLDFEVK---NSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPP--HNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDE---GCFKVEFLGF------------YFIQLQKPLDRE--------LVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISE-LAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQ-DHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTIS----DINDNAP--VFYPVEYFASIMENEPPG-KLLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTG--VISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAV 726

HSP 2 Score: 170.244 bits (430), Expect = 1.371e-42
Identity = 185/702 (26.35%), Postives = 311/702 (44.30%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQF-FRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPII-TVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL-GNRFYHKLMINPSQAFELTESGELFLV-LSFDREAMESNPVRIFASVSDGR-YNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHV----EATDQDSDIYGPIEYKI-SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG----FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            V I V D+NDN+P F        + E A      L L  A DPD  +NGT++Y +    D  + Q  F+  +     P       LD E      + + A D G+  KTG+  + + + D NDN P F K+ Y+ TI E   +   V+++ ATD DS +NG++ Y   + S++ Q      F + T++  G ++ K +LD +     + + F V A D+G+    S   V + I D+ND  P+   V Y          ++I EN     +  V+  D D G   ++       ++++I G N+          + S D    +I  +   D E  +     I  KD  N              A + V + ++ DN P +L   Y F  YEN P    K   +G +  + KD  G+  Y  +  +P+  F +  +G +  +    DRE      + + A V   +  +   ++N+++LD ND AP FS  +     V+   +  VG V     A D D+   G + Y++ S    L  INS SG+I++  KL   ++  Y +Q+LA D+ +           +     + L+ N+P  KF     +  + ++ P+ ++ F + A D D  +NG + Y I +      F +F      G L+I  + SL +    S  L++ A+D G+P+  S++V V I +
Sbjct:  411 VLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQL-NATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKP-------LDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYE--ISSSDAQ--VNGLFELNTQT--GVLWTKSQLDRETK---SLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYF---------ASIMENEPPGKLLQVTATDADEGTNAVI-------SYDIIGGNNN---------GNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGNKYA--------AKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVP----KGTLVGRVYATTKDKNGSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSV---IVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGS-------PPQHSTMTIHITLSINHPP-KFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIF----PGGKLYI--RKSLLQALKGSYDLIVRATDGGVPS-FSASVPVTIYI 1040

HSP 3 Score: 126.331 bits (316), Expect = 4.287e-29
Identity = 179/746 (23.99%), Postives = 316/746 (42.36%), Query Frame = 3 
Query: 1056 TLRLSNMNFKTSDYFLL--HSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNS--PRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDG--RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREE------KEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKD-GFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASD 3251
            T  +S+ + + +  F L   +  L  K  +DRE      +K+      L   +G  +  S + V +T++DINDN P F   E    ++EN       L    A D D   N  I+Y +    +   +  F +  S   +  L     LD+EV +F+ + + A D GN     T  + + V ++ DNLP+F   +Y  T+ EN+P    V  + AT    D+NG ++Y  A+ S +   L       + +S  G I +   +D     R  +  ++++      +  P  ++ TV I ++D ND  P  + + +  +  G          +   +   + VD D+G  G+V   LT+ N E +  IN                    +IK  ++    +      +++  D+ +  +++   I +T             ++PP++  S Y      ++P + +    + + + S K+ G  FY     N    F +   G+L++  S   +A++ +   I  +   G   ++ +V + + I D ND   +F  +T+RF   ENS   T VG + A   D      I Y +      F+++ +SG I    +LDREE         Y +Q  A+ N    +   +     V VTV DLNDN P         + V + + P G  VF ++A D D  +N    Y ++   G + F I+S +G L +    +L     +S +LV+ A+D
Sbjct:  566 TYEISSSDAQVNGLFELNTQTGVLWTKSQLDRE------TKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPP--GKLLQVTATDADEGTNAVISYDIIGGNN---NGNFSIDSSTGVISTLAS---LDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYAT--TKDKNGSISY--AIVSGDPTNL------FLVDSTGGIIKINGDMD-----REEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTW-------LVGQVVYNAAAVDLDAGKNGLVRYQLTS-NAEGLLWINSTSG----------------VIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLSI----------NHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKN-GQLFYSIPQGNEEGLFGIFPGGKLYIRKSL-LQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYN----DTTIKRDKAIVIVTVTDLNDNAPVFS-RAVYAITVSELSLP-GSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHL--SKTLDRETTSSYNLVVKATD 1238

HSP 4 Score: 120.939 bits (302), Expect = 1.875e-27
Identity = 165/670 (24.63%), Postives = 274/670 (40.90%), Query Frame = 3 
Query:  975 HFVTTEELHPNSLIGDLKPYL-----SSEMLQTLRLSNMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRS--KKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQE----NKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREE----NDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFK---------SYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPV--RIFASVSDG----RYNQTVSINVQILDENDL--APVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSP--LFSINSKSGMIRVTTKLDRE 2876
             F   E   P +L+G L  +      + +++ +L  S  +F       + S  +  +  +DREE+  K++ +N  I++   +Y  +  K+   I V +TV D+NDN P F++  +  + V   +   S ++  +A D D  +N    Y L      +K FI S    L +S            LD E    Y + + A D  N     T KI+I V D ND  P+F ++ Y   I E+  +   VI + A+D D  +NG + Y  +        LA  +     ES  G++ V + LD + T     ++  ++A D+G  P  S   VT+ ++DVND  P+     +T         T+ EN    + +   +  D+D+G    +   + +Q                + VN  + +     I  I   D E      D  +  ++  D        Q   +L+    I V + DENDN P ++  P             + E+  RN   +V   I+       GN  Y  L  +PS       +G+L ++       +  NP   ++    SDG    R  QTV   V +  E  +   P FS   Y+ +  EN  + T V  V A    S + G IEY ++  S    F +   +G+++ T  +DRE
Sbjct: 1056 RFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSESHFAVD----VRSGQITTRVRLDREELI-KNTGSNVYIMQAEAMYNDTTIKRDKAI-VIVTVTDLNDNAPVFSR-AVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLSK----------TLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSIS-----NGNLAAMFD---VESATGRLIVAKSLDFETT---QLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVT--------LTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPS-----------KTFSVNSATCE-----ITTIAAIDLETMPAGRDSFQLVVMATD--------QGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAGSSLNVMTITAEDPDRNSNGKVTYSIIS------GNNGYFNL--HPS-------TGQLQMI-----HQIPDNPTIYQLTIQASDGGQPSRQTQTV---VSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGGFEVVKSTGVVKTTRGIDRE 1642

HSP 5 Score: 105.145 bits (261), Expect = 1.415e-22
Identity = 141/587 (24.02%), Postives = 238/587 (40.55%), Query Frame = 3 
Query: 1104 LHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL-GNRFYHKLMINPSQA------FELTESGELFL-------VLSFDREAMESN----PVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN---SFSTFVGHVEATDQDSDIYGPIEYKI 2801
              S  +   + +DRE+V S +      I      +G + K    +V++T+ D NDN P+F +   +  + E A+   + L +  A D D  +NG ITY++  + D   +  F L      +    Q   LD E +  Y   +LA D G+PQ   ++K+++ + D NDN P+F    Y  +IMEN P   K++++ ATDAD   N  ++Y     +NN        F I  +S  G I     LD ++      F  ++SA D GN        V + +++  D  P+              + T+ EN     +             G V     ++N  +   I   +  NL+ V     D    IIK   + DREE       +I +           P  L+ +A + + + D NDN P++  S                     I+++    L G   Y+   ++          ++LT + E  L       V+   R+  + +     V++ AS S G   Q  ++ + I    +  P F+L +Y  + + +   S+  F  +V A DQDS   G + Y I
Sbjct:  477 FQSGLVTTAKPLDREQVSSVT------ITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQV-SATDVDSGDNGRITYEI-SSSDAQVNGLFELNTQTGVLWTKSQ---LDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEP-PGKLLQVTATDADEGTNAVISYDIIGGNNNGN------FSI--DSSTGVISTLASLDHEVE---EFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMY--------NFTVYENVPKGTLV------------GRVYATTKDKNGSISYAIVSGDPTNLFLV-----DSTGGIIKINGDMDREEKAQYLLAVIAR------VGTVKP--LSAQATVNIEVLDRNDNAPQFSTSSV-------------------IVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDS-GSPPQHSTMTIHITLSINHPPKFTLSSYVTHVLASQPLSYQFF--YVVAVDQDSGKNGQLFYSI 985

HSP 6 Score: 100.908 bits (250), Expect = 2.825e-21
Identity = 166/691 (24.02%), Postives = 280/691 (40.52%), Query Frame = 3 
Query: 1275 PKFNQPE-IEHVVVENANARLSDLYLYE-AEDPDRQENGTITYKL-QENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLD---IDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSI-NNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGI-LEVSDKDLGNRFYHKLMI---NPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGR--YNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTF-VGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREE----KEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            PKF     + HV+   A+  LS  + Y  A D D  +NG + Y + Q N++ +F  F      P     + +  L    ++  Y + + A D G P  + ++ + I +QD ND+  LF    +   + EN      V  +VA   D      + Y  +L S+       ++F +   SG+  I  + +LD   +      N +     A  N  + +  +  V + + D+ND  P+ +            + T+ E S+  + +  +  +D D G            N +    +     ++ + +N  + +  +      K  DRE        +   D  N          L + A+I + + D ND  P + +S Y     E     D     L I L  SDKD+G     K  I   N +  F++ + +G L +  S D E  +   + I A    G    + TV++ V +LD ND AP+F          EN  + F VG   A+D+D+     I + +    PS  FS+NS +  I     +D E     ++ + + ++A D  + +   R++ T  V+    D NDN P    PP                V T+ A DPD   NG V+Y II      F++   +G L ++  H + +N  T   L + ASD G P+ ++  V
Sbjct:  944 PKFTLSSYVTHVL---ASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIF------PGGKLYIRKSLL--QALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVY--SLISSE------SHFAVDVRSGQ--ITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFS--------RAVYAITVSELSLPGSPVFRIKAMDADEG-----------DNAKFFYSLVSGTGMDKFFINSSTGELHLS-----KTLDRETTSSYNLVVKATDASNAN--------LYSTAKIEITVGDSNDQRPVFPESDYTVNITE-----DALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQ-DHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVT----DENDNSPGFVSPPAAAA-------GSSLNVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMI--HQIPDNP-TIYQLTIQASDGGQPSRQTQTV 1561

HSP 7 Score: 73.1738 bits (178), Expect = 7.727e-13
Identity = 67/248 (27.02%), Postives = 103/248 (41.53%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACD-NGNSPRCSRTTVTIRIIDVN 1949
            G  K  +  S+++ V D NDN+P F  P         A + L+ + +  AEDPDR  NG +TY +    +     +F L  S   +  + Q+     +    Y + + A D G P +     + +  +      P F  A Y+ ++ EN      V+ ++A    S  NG + Y     S+         F +V  +G     VK    ID       F+ +V A D  G S R S  TVTI + DVN
Sbjct: 1454 GSPKLSTRKSITVQVTDENDNSPGFVSPP-----AAAAGSSLNVMTI-TAEDPDRNSNGKVTYSIISGNN----GYFNLHPSTGQLQMIHQI----PDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGG------FEVVKSTG----VVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0])

HSP 1 Score: 175.252 bits (443), Expect = 4.520e-44
Identity = 191/739 (25.85%), Postives = 327/739 (44.25%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRF---YHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            S  + V + +DRE     ++ N   ++R     G   +  + + +I V D+NDN P FN       + EN     + +    A D D  EN  +TY+L            + +++P     +     LD E +  Y + + A+D G P ++    I + + D NDN P F ++ Y  T+ EN      ++ ++A+D D+  NG+V Y  ++ S N      N F I  +S  G+I V   +D +    +  ++  +SA D+G  P  S   V I + D ND  PI   N        + S  I E  SI + +A V+  D+D G    V        + +++G  D  +  +  +N       +  +K  KE +RE        I   D        +    +T++ E+ V+++D NDNPP +    Y     EN  ++      +  +   D D+G      Y  +  N  + F++ + SG +      D E  E +   +  + +D +Y    ++ +++++ ND+ P F+   Y  +  ENS  ST V  V A+D+DS  +G + Y I     S  FSI+ +SG+I     LDRE    YAIQ+   D  N       +  T V++ +LD NDN P  KF        I  N       F + A D D   N  ++Y + ++  + F I + SG   I +   L     ++  L + A D+G P P++S++++++ +
Sbjct: 1048 SGLISVAKRLDRE-----TTANYTLVVRATET-GSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQT-VAKVTATDRDEGENAKVTYELS------VGDTSKFEVNP-ATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTY--SIISGNH----GNAFRI--DSTTGRITVVGVVDREA---LASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASN--------ETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVF-------YSIVRG--DTSAFAINAMN------GVLTVK--KEINRETVPTYTLTIRASD--------RGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQS----TSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFE--EKSQYGLEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDS--FGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGN----PPLSNLTWVTIKILDENDNSP--KFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRN--DAFMIGASSG--VITLAQPLDRENKSTYDLAIQARDHGTP-PQASSITIRVTV 1709

HSP 2 Score: 165.622 bits (418), Expect = 4.541e-41
Identity = 187/693 (26.98%), Postives = 288/693 (41.56%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLGNRFYHKLMIN--PSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDG---RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAV 3284
            V+I + DINDN+P F  P +  V    +++    +    A D D   NG + Y L +N D      F +  S   +    QL   DYE +  YM+ + A D G P ++    +K+ V D NDN P F K+LY  T+ EN+     V  + ATDADS  NGK++Y   L  N     A + F        G+I  +  LD +    I  +   ++A D       + TTV I I D ND +P  T         G     I E+S     +  ++  D+D GP G V        + +I G N   S  L        D +  I+      DRE        +   D  + Q++      +T    + VL  D NDN P + KS +  +  E      +  V   +L+V   DKD G+     L ++   S  F +  +G +      D E   +  + + A   DG     + T  + + I++ ND  P F       +  E+ + +T V  + ATD D     P+ + I        F I+  SG+I V  +LDRE    Y + + A +  +       +     ++ VLD+NDN P   F P      +  N PIG  V  + A D D  EN  V+Y++     + F ++  +G   +  K  L      S  L + A D+G P+  + A 
Sbjct:  569 VTIALQDINDNSPIFQGPYVFRV--SESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDV-----FSINTSTGLITLKTQL---DYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSI-LSGNENMAFAMDRF-------TGEITTRVPLDRET---IASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFT---------GPSRFNISEDSPTGTRVGQLTATDRDIGPNGAV-------TYAIISG-NQGNSFQL--------DPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQS------ITASIHVSVL--DVNDNAPRFEKSLFSGEIRE------DASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGFVLSKTPLDYETTAAYQLTVTA--RDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSDGT---PLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGS----QGESVYNNATIRVLDVNDNAP--VFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATG--LVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAA 1188

HSP 3 Score: 159.458 bits (402), Expect = 3.859e-39
Identity = 217/779 (27.86%), Postives = 327/779 (41.98%), Query Frame = 3 
Query: 1089 SDYFLLHS-SYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGK-GKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIIT-VNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDK-DLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDG----RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYPLDHQPRIEKS 3380
            + YF + S   ++ K + DRE   S         LR     G   +    +V I + D+NDN P F+  +    V E+  A  + +    A D D   N  + Y          +  F L    D V  ++ +   LD+E R  Y + L   D G+P  T T  + I V D NDN P+F  + Y+  + EN P   +V    ATD DS  NG + +           +  N  G+ T  G  G I + +  D +      R+D  V A D G   +     VTI I DVND  P+ +  NY         S  IPE++ I + +  V+  D DSGP G +E       + LI G N K + N+        D     I+   E DRE       ++  +D              ++   + + + D NDN P + + PY F+  E+     +    +G +  +D  D  N      + + +  F + T +G + L    D E      V + A   DG    R + TV + V + D ND  P F+   Y     EN +    V +V ATD DS   G I Y I     +  F+++  +G I     LDRE    Y++ I    NA++    R    TTV++++ D NDN P   F  P +   I  + P G +V  + A D D+  NG+V+Y II     N F +D +SG   + V+ +L    + S  LV+ ASD G P  +S   S+ + +   N             D+ PR EKS
Sbjct:  212 TSYFTVDSQGVIRTKGAFDRETKASYQ-----VALRA-QDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDV-AIGAAMVTVTASDKDNGNNADLRYSFTSGN---TNHAFTL----DAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQV---SATDRDSSTNGALVFGI---------IKGNDDGVFTIDGSTGIISIAKSPDYE---NKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNY---------SKQIPESTVIGSTVVTVTATDLDSGPRGRLE-------YRLISG-NVKGAFNI--------DANSGSIRVSSELDRETTPSYSLQVEARD--------GGSTSRSSSTRVTIALQDINDNSPIF-QGPYVFRVSESSSPGHQ----IGQVAATDADDSSNGDVRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTA--KDGGTPSRSSLTV-VKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTI----NADDGSLVRFMAATTVNISIADENDNQP--TFTGPSRF-NISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSG--ILSVRSTLDRETIPSYTLVVKASDAGSP-QQSITASIHVSVLDVN-------------DNAPRFEKS 897

HSP 4 Score: 152.525 bits (384), Expect = 5.125e-37
Identity = 191/712 (26.83%), Postives = 310/712 (43.54%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL--QENKDFIFSQFFRLQ-ISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVS--ACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL---GNRFYHKLMINPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSDG------RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPS--PLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKS-SAVSVQIRLPFENP 3317
            V I V D NDN P+F  P   +V     N   + + +  A D D   N  ITY L   ENK  + S+   ++ ++P           LD+E +  Y M + A D     K  T    I V D NDN P F  ++Y+  + E++ V   V ++ A D D   N +++Y  +L S +      +YF   T   +G I  K   D     R  +  + V+  A D G+  R  + TV I I+DVND RP+ +    T       +S   + +I   +  V+  DKD+G    +    T+ N           +  L  V        +  +    +F++  +  +   +  + +P           LT+ + +++ ++D NDNPP +  S Y+ +  EN P   +       +  +D+D    G   +  +  N    F +  S G + +  S D E    N  R   +V         +Y+ T  + + I D ND +PVFS   Y     E++   + V  V ATD DS   G +EY++   +    F+I++ SG IRV+++LDRE    Y++Q+ A D  +         T  +     D+NDN P   F  P    V +S+ P GH++  + A D D   NG V Y  + D  ++FSI++ +G   I +K  L   + T   + + A D G P+  S + V V +    +NP
Sbjct:   56 VVIDVKDENDNAPEF--PLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVTP-----------LDHETKDSYTMRISAFD----GKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSY--SLVSGD-----TSYF---TVDSQGVIRTKGAFD-----RETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYT-------ASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNT--------NHAFTLDAVT------GVVTVSRSLDFEQRSSYALGLSVTDRGSP----------PLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQ-------VSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYE----NKTRYDLTVQARDRGVPVKYD-TAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQ----DINDNSP--IFQGPYVFRVSESSSP-GHQIGQVAATDADDSSNGDVRYA-LSDNTDVFSINTSTG--LITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNP 682

HSP 5 Score: 150.984 bits (380), Expect = 1.238e-36
Identity = 176/715 (24.62%), Postives = 300/715 (41.96%), Query Frame = 3 
Query: 1218 KKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRF---YHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFA-SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTF-VGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL-FSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNP 3341
            K  +F+ + ITV+D+NDN P F     +  V E+  A  S +    A D D   N  ++Y L       F+      +    V R    F  D E +  Y + L A D G+P ++G   ++I + D NDN P+F  A Y  ++ E++ +   ++ + A+D D+  N  + Y F   + N         G+VT        V + LD +   + + +   +S  D G+ P    + + I + D+ND  P+ + +           S + EN+       VS  D+DS   G +        F +I+G ND     +        D    II   K  D E        +  +D          P++  + A++ + I+D ND+ P +  S Y     +  P +      +  +  +D D G R    Y  +  N   AF +   SG + +    DRE   S  +++ A        + +  + + + D ND +P+F    Y F   E+S     +G V ATD D    G + Y +S  + +FSIN+ +G+I + T+LD E+K  Y + + A D               V     D+NDN P  +F        +  N   G  V  + A D D   NG +SY I+    N+ F++D  +G +   V     + +  +S+ + + +D+G      +A +V I +  EN ++ +   P
Sbjct:  148 KHTTFVPL-ITVDDVNDNAPFFALSVYKTGVYEDV-AVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFT------VDSQGVIRTKGAF--DRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVT--------VSRSLDFE---QRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAY--------QSRVKENTPAG--TQVSATDRDSSTNGALV-------FGIIKG-NDDGVFTI--------DGSTGIISIAKSPDYENKTRYDLTVQARD-------RGVPVKY-DTAQVTIFIEDVNDHSPVFSPSNYS----KQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQ-GPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVD----DVNDNPP--QFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPL---DRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGP 793

HSP 6 Score: 102.834 bits (255), Expect = 6.938e-22
Identity = 106/425 (24.94%), Postives = 185/425 (43.53%), Query Frame = 3 
Query: 1215 SKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKD---FIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINR--FDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL 2474
            SK  +  +V+I V ++ND TP F Q      V EN+    S   + +    DR   G+++Y +   KD   F   Q   +  + D         +LD E+   Y +++   D GNP  +    + I++ DENDN P F+ + Y  +I+EN        ++ ATDAD   N ++ Y     S N   +     G++T        + Q LD     R N+  +D  + A D+G  P+ S  T+ + +ID+ND RP+I  + +     G      P+ +   ++  +   D D+G            N EL   +   E  +++ +++ + D     I      DRE+      +I   D         NP  L++ A++++ + DE+DN P +  + Y     E+ PR         I++V+ +D+
Sbjct: 1492 SKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTS---VVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTAD---------VLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNL---SRNDAFMIGASSGVIT--------LAQPLD-----RENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSL----RGSVRENQPKET---HVMRILASDADTG-----------LNAELTFSLLSNEHKSVFTLDNTTGD-----ISTKVPLDREQQAVYTLRIGVAD-------KGNP-SLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRG------ASIVQVTARDI 1851

HSP 7 Score: 94.7449 bits (234), Expect = 1.818e-19
Identity = 157/585 (26.84%), Postives = 238/585 (40.68%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDL----TPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDK--SQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEV----SDKDLGNRF---YHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSDGR---YNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFI 3185
             D E    Y + +LA D  N    G   + I V+DENDN P F    Y   I EN P  +  I + ATD DS  N  + Y      N            +  S  G+I     LD +     T RI+ FD                TT          F P+ITV+ + +N         P  +++ Y   V    +D   G IV   LT  + ++  GIN + S +L   +    + D Q  +I+    FDRE     +  +  +D  +  R+ Q  +++    EI+    D NDN P +  + Y     E+        V +G   V    SDKD GN     Y     N + AF L   +G + +  S D E   S  + +  SV+D        T  + + + D ND  PVFS   Y+    EN+ +     V ATD+DS   G + + I       +F+I+  +G+I +    D E K  Y + + A D         +  T  V++ + D+ND+ P   F P      I  +  IG  V T+ A D D    G + Y++I       F+ID+ SG++ +
Sbjct:   28 FDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAI-VTATDRDSGTNAAITYSLFSGENK----------FMMNSKTGEIRTVTPLDHETKDSYTMRISAFD-------------GKHTT----------FVPLITVDDVNDNA--------PFFALSVYKTGVY---EDVAVGSIVR-QLTAVDLDV--GINARLSYSLVSGDTSYFTVDSQ-GVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEI----EIL----DVNDNRPVFSSAQYTASVDED--------VAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGL--SVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT--QVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRG----VPVKYDTAQVTIFIEDVNDHSP--VFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRV 537

HSP 8 Score: 88.9669 bits (219), Expect = 1.263e-17
Identity = 75/248 (30.24%), Postives = 115/248 (46.37%), Query Frame = 3 
Query: 2562 FDREAMESNPVRIFASVSDGRYNQTVSINV-QILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            FDRE+     + + A  +  R ++  ++ V  + DEND AP F L++Y FN  EN+ +  V  V ATD+DS     I Y +      F +NSK+G IR  T LD E K+ Y ++I A D  +       T          D+NDN P       +  V  D    +G  V  + A D D+  N  +SY ++    + F++DS+     I  K +       S  + L A D G P+ +S   +V+I +
Sbjct:   28 FDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHTTFVPLITVD--------DVNDNAPFFALSVYKTGVYED--VAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQG---VIRTKGAFDRETKASYQVALRAQDGGSPS-RSGQATVEIEI 261

HSP 9 Score: 67.3958 bits (163), Expect = 3.991e-11
Identity = 57/211 (27.01%), Postives = 98/211 (46.45%), Query Frame = 3 
Query: 1077 NFKTSDYFLLHSS--YLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDAD 1703
            N   +D F++ +S   + + + +DRE   +KS+ +     R    +G   + S I++ +TV DIND+ P  N   +   V EN   + + +    A D D   N  +T+ L  N+       F L  +  ++   + L   D E +  Y + +   D GNP  +    + I V DE+DN P F+   Y  TI E++P    ++++ A D D
Sbjct: 1655 NLSRNDAFMIGASSGVITLAQPLDRE---NKSTYDLAIQARD---HGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVREN-QPKETHVMRILASDADTGLNAELTFSLLSNE---HKSVFTLDNTTGDISTKVPL---DREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDID 1852
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751])

HSP 1 Score: 170.244 bits (430), Expect = 2.142e-42
Identity = 186/689 (27.00%), Postives = 292/689 (42.38%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDY-EVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESST---IPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG-NRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSDGRYN-QTVS-INVQILDENDLAPVFSLDTYRFNCVENSF--STFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL-FSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASD 3251
             + +V+I V DINDN+P+FN   I   + E+     +  Y     D D    G +++ L  N   +F+          N   L    L+DY    + Y + + A D G+P ++ T  ++++V D ND  P+F    Y   ++E  P    +IE+VATD DS ENG+++Y F        ++  + FG+      GKI++K KLD +    I  ++  V A D+G   R S   V + + DVND           NN H  ++S    + EN  +  Y+ AVS  D D G  G V      Q  + I                   D+Q   I   +  DRE      F I+  D  +  R         ++ ++ V++ D ND  P++ K+ Y     E+ P        L ++   D   G N     +++   +AF L + +G L LV   DRE    + + + AS   G  + +T++ I + +LD ND  PVF ++   F  V       + V  V A D D    G + YKI        F IN  +G+I     LD E    Y +++ A D   +++       T       D NDN P     P   +  I  N PI   V T++A D D   N  + Y I        F I+S++G   I   H +   +++   L + A+D
Sbjct:  789 GYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHT-FYTVSVFDADSGVLGRVSFSLLSNPGTLFNL-------DSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAF------DSKVDTSKFGL---RNGGKIFIKSKLDRE---DIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVND-----------NNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFI------------------VDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPR--------VDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSS---LLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVF-INETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVE---DANDNRPTFDKNP--IITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETG--LIQTTHPIDREEISEYSLKVRATD 1409

HSP 2 Score: 157.532 bits (397), Expect = 1.623e-38
Identity = 191/695 (27.48%), Postives = 311/695 (44.75%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSY-ENRPRNDEKRVKLGILEV-SDK-DLGNRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVS---INVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPL--FSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIP 3263
            G   + S   + + V D+ND +P F        V+E      S++    A D D  ENG I+Y      D   +  F L+    N  ++     LD E  + Y ++++A+D G P+++ +  +K+ V D NDN P F++A Y   + EN PV   +  + A+D+D   NG V YRF        Q+A      + +   GKI   Q LD +       + F + A D G+SPR  +T VT+ + DVND  P  + N  +   + D    +P  S  + +  ++  D   GP        ++  + ++ G    ++ +L +V          ++  +   DRE        ++  D     +     ++     EI VL  D NDN P ++     FK+  E  P      V   +L V SD+ D G   Y  +  N    F++ E +G +  + + D E      +R+ A+   G+  Q  S   + + + D ND  P F  +       EN   +T V  ++A D DS +   I Y I   SP   F INS++G+I+ T  +DREE   Y++++ A D A   E  R   T T+ + + DLNDN PK      + L  +  + P   +V ++ A DPD  + G+V Y+I+      FS+D K+G L ++   SL    +    L + A+D G P
Sbjct:  888 GSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPD-SNIIEVVATDVDSGENGRISYAFDSKVD---TSKFGLR----NGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRF------DTQVAQ----FIVDKQTGKITTSQVLDREAKA---SYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNED----LPVGS--SLLTLIATDDDQQGPN-------SDITYMIVAG---PKAFSLNQVTG--------VLTLVSPLDREVTHRHILHVVASD-----KGGNQSLETITYIEINVL--DVNDNYPVFINET-TFKTVPEKLPIG---SVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSAT-DMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQA-FTEQDRLYNTATLKIIIQDLNDNAPKFV---SRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLKLI--GSLDYEDVPQYTLHISATDLGSP 1519

HSP 3 Score: 156.377 bits (394), Expect = 3.251e-38
Identity = 202/746 (27.08%), Postives = 306/746 (41.02%), Query Frame = 3 
Query: 1107 HSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKF-NQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL-QENKDFIFSQFFRLQISPDNVPRLM---QLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTT-VTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGN---------------RFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQIL----DENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF--NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNG 3257
            ++  +  K  +DRE+V    S  N  I+        S  P   +V + V D+NDN+P F      + VV EN       L    A D D   N T +Y +   N   +F    +     D    L+       +D E    Y++ + A D GNP   G L++ I V+D NDN P F    Y  TI ENI V   ++++ A+D D   N ++ Y     S+ Q       FGI      G I    +LD +       +  +V A D G+S + S +  V I ++DVND  P+I V+Y     +      + EN+ I   +A VSV D DSG  G V   L        +G +   S+    +ND+S      II   +  DRE +DH   K +C D  +  R        T E    + + D ND  P++ +  YE + +EN   N      + I+   D+D G+                + H   I+PS       SG +      DRE +   P  +   +   R +  +S N  ++    D ND  P F+  +Y  +  ENS S + V  + A D D      I Y I  P+  F ++ + G++  +  LD E +  Y  Q+ A D            + T      DLNDN P   F P    V    N  IG  +  ++A D D     +++  II+ G    +FS+D   G+  I +   L      +  L + A D G
Sbjct:   10 NAGVITTKTVLDREKV----SAYNLTIVEF------STPPKSYTVLVYVQDLNDNSPSFVRGTSAKLVVFENDKDFRQKLI---AVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDPQA-----IFGI--HPTTGVIVNNVRLDYEAK---RSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSY-----QVTENATIGTQVARVSVSDADSGKNGEVNVTL--------EGGDGYFSMKFDVLNDES------IIAVGQSLDRETHDHFFLKAVCIDKGDPPR--------TTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVN----TLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPS-------SGMITTATDLDREQI---PQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSLT------DLNDNQP--VFDPSSYSVEYFENTRIGQSICQLKAIDRD-SPKFAITRFIIEQGNADEVFSVD---GSGLITLAKLLDRETQDNYLLTVKAVDGG 679

HSP 4 Score: 155.606 bits (392), Expect = 6.292e-38
Identity = 184/759 (24.24%), Postives = 328/759 (43.21%), Query Frame = 3 
Query: 1086 TSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILV-YGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDE-NGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG--NRFYHKL-MINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFAS----VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLP-SPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ-----KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNL--FSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTP-KSSAVSVQIRL 3302
            TS + L +   + +K  +DRE++        +  L++I + +G  ++ S   V + V+D+NDN P F Q      V EN     + L    A D D   NG +TY+     D   +QF    I      ++    +LD E +  Y+  ++A D G+  +    ++ + V+D ND  P F K  Y  T+ E++PV   ++ ++ATD D    N  + Y         +  + N          G + +   LD ++T R      +V++   GN    + T + I ++DVND  P+  +N  T         T+PE   I + +AAV  VD D G  G V   + N N +             +++N+ +      +I  ++  D E  +    ++   D    Q       Q T+   + + ++D NDN P + K+P     YEN P N      +  ++  D D G  +R ++ +   +P   F++ +E+G +      DRE +    +++ A+        R   T ++ + I D ND AP F      +   +  F+  V  + A D D+   G +EY+I  P +  FS++ K+G++++   LD E+   Y + I A D  +      +             N     +   PP+      +  +  N P G  V  + A+D D   N  ++Y  I  G  +  FSID  SG   ++V +S+ + +   ++ + V +  G+  P + S+ SV+I +
Sbjct:  957 TSKFGLRNGGKIFIKSKLDREDI-------EEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPV-ATYLGAVSASDSDEGSNGHVTYRF----DTQVAQF----IVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVA---GPKAFSLNQV-------TGVLTLVSPLDREVTHR--HILHVVASDKGGNQSLETITYIEINVLDVNDNYPVF-INETT-------FKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTD-----------GTFKINETTG-----VISTLRALDFEVTNRYVLRVSATDMGKKQ-------QKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPIN----TNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQL-----------FNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYS-IPSGVEMDKFSIDKHSG---LIVTNSILDREKKDTYFLTVHA-TGVSYPFRVSSTSVRINV 1636

HSP 5 Score: 137.887 bits (346), Expect = 1.410e-32
Identity = 173/681 (25.40%), Postives = 286/681 (42.00%), Query Frame = 3 
Query: 1236 SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL-QENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQIL--DENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKE-NGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLV-LVASDNG 3257
            +V +++ D+NDN P F+         EN     S   L +A D D  +     + + Q N D +FS         D    +    LLD E +  Y++ + AVD G         + I V D ND  P+F KA Y  TI E+      +  + A   D   N +V Y  +           N   IV  +  G +Y++ ++D +  P +      V A D G  P      VTI +ID+ND  P    + I           +PE++ I +    VSV D DSG  G V   L +    L    ++  +L+L ++ D     + Y +                 +  +D  +  R++   ++L         + D ND  P +    Y     E  P  D   +++   +V   + G   Y       +  F L   G++F+    DRE +E   +++ A +  G   ++ S +V+++  D ND  P F   +Y F   EN   +T++G V A+D D    G + Y+       F ++ ++G I  +  LDRE K  Y   I+A D  +     +   T  V     D+ND  P  KF   +  V ++ + P+G  + T+ A D D +  N  ++Y I+  G   FS++  +G L +V   S  + ++T  H++ +VASD G
Sbjct:  584 TVHVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSICQL-KAIDRDSPKFAITRFIIEQGNADEVFSV--------DGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDKGTNAEVVYSIS---------KGNTDNIVLINSTGTLYLQSEVDHEKIPSLY---LTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSIL--------VRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTL----------------PVQAQDGGSPPRSSTAMLELK--------VVDVNDYSPVFGNWSYTAHVLETTPP-DSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIA-IDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVR----DVNDCSP--KFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVA-GPKAFSLNQVTGVLTLV---SPLDREVTHRHILHVVASDKG 1199

HSP 6 Score: 112.464 bits (280), Expect = 8.393e-25
Identity = 144/625 (23.04%), Postives = 242/625 (38.72%), Query Frame = 3 
Query: 1107 HSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSK--KPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQE-NKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVT-ESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYI-------IKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNP-VRIFASVSDGRY---NQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS---TFVGHVEATDQDSDIYGPIEYKISLP--SPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNA 2921
            HS  +     +DRE+         D     +   G S   + S  SV I V D NDN PKF  P +   V EN+ ARL  +Y    +D D   N  + Y +   N D  F+          +   L     LD E +  Y + + A D   P  T    I I ++D+NDN P+F+++LY  TI E  P    ++ + A+D DS  NG + Y           L+ + +G+ + +S  G +Y   + +  +      ++F   A D G  P+ +   V I+I D N+  P  T           E    P  S +  +  V+  D D+                  +  N K +   YR++D      +++       ++    F           II +D+ +        +Q        ++I +  D+PP +L    +  +  + P N +    +  +           Y  +  N  +AF +     +  V S D    ES    R+    +   +   N  + +++ ++D ND +P F          E++ +    FV  V ATD DS   G + Y I     + +F+I+S +G I     LDRE    + + I   D+ 
Sbjct: 1594 HSGLIVTNSILDREK--------KDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPENSPARL--IYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTI-------GRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVY----------TLSNDTYGVYSIDSRTGIVYSAARFETSIK---QEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPY-------EVHIFPNTSASALVTMVTATDADTD-----------------KSTNGKVT---YRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQ--------IVIGNIQDDPPRFLN---QTPARVSIPENSKVGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSG 2150

HSP 7 Score: 102.834 bits (255), Expect = 6.710e-22
Identity = 178/747 (23.83%), Postives = 299/747 (40.03%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSK---NNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVV-ENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVND-----FRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFD-REAMESNPVRIFASVSDGRYN--------------QTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSD--IYGPIEYKI---SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK-DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNG 3257
            +  ++    IDREE+   S K    +        +Y  +      ++ I + D+NDN PKF    + +V+  E  N +++ +    A DPD  + G + Y++       FS   +  +       L  +  LDYE    Y + + A D G+P  T      + V D NDN P F + L+  T+ EN P    V+++ A D DS  N ++ Y  ++PS     +  + F I   S  G I     LD +   + + +   V A       R S T+V I ++D ND       P++T+              +PENS    I  ++V D D G            N +++  I    +   + +   + +     +    + DRE     +  +  KD          P   T  A I + I+D+NDNPP + +S Y     E  P        +  L  SDKD G+        N +  + L  S + + V S D R  +  +  R   S+    YN                V + ++I D+N+ AP F+   Y  +   N S S  V  V ATD D+D    G + Y++      + LF + S +G +R +       +  +A+ I+A D+ +    G       +     ++ D+ P+     P + V I  N  +G  + T+ A       +  V+Y II  +    F +D  +G + +    +L      +  L LVA+  G
Sbjct: 1384 TGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTA------TLKIIIQDLNDNAPKFVSRNLTYVMEDEPFNFQVTSI---TALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGV-------LKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTY--SIPSG----VEMDKFSIDKHS--GLIVTNSILDRE---KKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLK-------------VPENSPARLIYTLTVQDLDYG-----------NNTKVLYSIMSGNTDGAFTIGRSTGE-----LSTTTKLDRETKASYQLSVQAKD--------ITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPG----TSILNLTASDKDSGS--------NGNIVYTL--SNDTYGVYSIDSRTGIVYSAARFETSIKQ-EYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIG----NIQDDPPRFLNQTPAR-VSIPENSKVGSYITTVRA---RASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQG 2043

HSP 8 Score: 95.1301 bits (235), Expect = 1.447e-19
Identity = 104/410 (25.37%), Postives = 175/410 (42.68%), Query Frame = 3 
Query: 1275 PKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPR------INRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNR 2483
            PKF  P     V ENA    S L +   ++      G I+Y ++ +  F   Q  R  +   N P       LDYE ++ +++ + A+DD  P K   + + I V D ND  P+F ++ Y     E IPV   V+ + A D DS  NG+V                 +F I +   KG   + +K  +  T R      I      V A D G+ P  +  +VTIR++D+ND  P+  V        G     + EN  +N+ +  ++  D+DSG    +       +F +I G        L+ ++  S     ++  NI  FD E     ++ +  K       +  NP  L++   I+V + DE++  P + +  Y+F    + P N +    +G +  +D+D G++
Sbjct: 2302 PKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENSNYFRIGQ--RSGVISVNKP-------LDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRV-----------------WFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRV-------PGPNDVQVLENLPLNSRLYEINATDRDSGANARL-------SFTVIGGTGQ----GLFLIDKFSG----WLTTNIT-FDYENTAVYQYSLTIK-----ATDAGNP-PLSSNITIIVNVADEDEYDPSFNRMDYKF----DVPGNAKIGDFVGQVTATDRDSGDQ 2652

HSP 9 Score: 82.0333 bits (201), Expect = 1.623e-15
Identity = 181/762 (23.75%), Postives = 296/762 (38.85%), Query Frame = 3 
Query: 1134 SIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIE-HVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVAT-DADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPP-----------EYLKSPYEFKSYENRPRNDEKRVK----------LGILEVS--DKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDR---EAMESNPVRI--------FASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDI-YGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKI-IKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            S  R E   K   N  CI +     G+  K + + V I + D N++ P+F +   E H+    + + L  +      D D+  NG +TY+L ++K+   +  F ++ +  +V R    F    + R  + + ++A D G+P   G   ++I + +  D+ P F   L +     +IP   KV   + T  A +  + +V Y   +  N  +    + F     +G   +     LD + T     F   + A   G         + I +ID ND  P    + +      D  +  P      ++  V+  D DSG  G V   +   N              ++ ++  + +     I   K  DRE        I   D+         P + TN  ++ V++ D NDNPP           E  ++     S      + E R+           + IL VS  D+D G+    K       +F +T S ++   +  D     A  +  VRI          ++  G   Q   + V+I+   +  P F L +Y     EN+   T V  V  TD  + +  G I Y I   S  F I  +SG+I V   LD E K  + + + AID+    +  R      VS    D+ND  P   F     +       P+G  V  + A D D   NG V + I   D    F+ID K+G   I  + +L    + + H+ + A+D G P P  + VSV IR+
Sbjct: 1808 SAARFETSIKQEYNFFCIAKD---QGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRLDDSKNS--TSLFVVESNTGSV-RTSAGFSNPPQGR--HALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRF---LNQTPARVSIPENSKVGSYITTVRARASSDAQVTYSI-ISGNKGRAFYVDPF-----TGVISVASADALDYEST---KNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPR-----FVVKVTATDVDSGTNGKVTYSIWTGN-----------EAGVFTIDSTTGE-----ITTAKLLDRETTASFDLVIRGTDS-------GIPPKSTN-CQVKVVVTDLNDNPPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKY------SFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITRE--PKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIE-NSNYFRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVS----DVNDEKP--VFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTG--VIRTQRALDHETIKTHHVSVRATDEGSP-PMHTDVSVTIRV 2502

HSP 10 Score: 80.4925 bits (197), Expect = 4.578e-15
Identity = 80/307 (26.06%), Postives = 134/307 (43.65%), Query Frame = 3 
Query: 1221 KPSFISVSITVNDINDNTPKFNQPEI-----EHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFE-KALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRIN---------RFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIV 2093
            KP  + V I V+D+ND  P F Q        E + V      +S      A D D   NG + + +Q   D      F +      V R  +   LD+E  K + + + A D+G+P     + + IRV D NDN P+F      +  ++EN+P+  ++ EI ATD DS  N +++                 F ++  +G+G +++  K    LT  I          ++   + A D GN P  S  T+ + + D +++ P  + N +      D    +P N+ I +++  V+  D+DSG  G V
Sbjct: 2387 KPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVS------AADKDSGANGRVWFAIQSGDD---KGSFAID-RKTGVIRTQR--ALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLS-----------------FTVIGGTGQG-LFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDP--SFNRM------DYKFDVPGNAKIGDFVGQVTATDRDSGDQGRV 2655

HSP 11 Score: 73.559 bits (179), Expect = 5.536e-13
Identity = 134/610 (21.97%), Postives = 235/610 (38.52%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYL-YEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVA----------------------------TDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSG-PGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLG--NRFYHKLMINPSQA-FEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT-VSINVQILDENDLAPVFSL-DTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEF--YAIQILAIDNAN 2924
             ++ + I V D NDN+P F+   +   + E+  A      +   A D D   NG +TY +    +   +  F +         +    LLD E    + + +   D G P K+   ++K+ V D NDN PLF+  L E  I E+      V  +VA                            TD DS  N ++ Y F + +++Q            ++  G I  ++ +D+ +  R +     V A D G  P+  R  V +RII   + +  +   +            +PEN+ +   +  V V D  +G P G +   + N N+              +R+  +S      +I   K  D E        +   D+    +  + P+ +         + D ND  P + +S Y  +  E  P      V   ++ VS  DKD G   R +  +     +  F +  ++G +    + D E ++++ V + A+        T VS+ +++LD ND  PVF +        +EN   ++ +  + ATD+DS     + + +       LF I+  SG +      D E      Y++ I A D  N
Sbjct: 2049 GYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNE---AGVFTID---STTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDP-LSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKI-------DADTGVISARRTIDVRI--RDSFIQIPVQAMDQGVPPQ--RALVYVRIIITREPKFELPSYF----------GKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENSNY--------------FRIGQRSG-----VISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYIN--------VSDVNDEKPVFGQSGYMAQWSEGIP------VGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGN 2597

HSP 12 Score: 62.3882 bits (150), Expect = 1.601e-9
Identity = 55/186 (29.57%), Postives = 85/186 (45.70%), Query Frame = 3 
Query: 1233 ISVSITVNDINDNTPKFNQPEIEHV-VVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKD---FIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELL--AVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQL 1766
            +SV+I V D+NDN P F  P    V V+EN   N+RL   Y   A D D   N  +++ +        F+  +F            L      DYE    Y   L   A D GNP  +  + I + V DE++  P F +  Y+  +  N  + + V ++ ATD DS + G+V + F  P++N  ++
Sbjct: 2496 VSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRL---YEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGW---------LTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNALKM 2669
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO34815 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN97])

HSP 1 Score: 154.836 bits (390), Expect = 2.513e-38
Identity = 200/750 (26.67%), Postives = 310/750 (41.33%), Query Frame = 3 
Query: 1089 SDYFL-LHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFIS---VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIK-IRVQDENDNLPLFEKALYEETIMEN----IPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACN-YFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPE-NSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEV----SDKDLG-NRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKI-SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAID-NANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSA 3281
            SD+ L  ++  +K  R+++R++  S           L +       PSF +   VSI V D+NDN P FN       V EN+    S L    A D D  +N  +TY +           FR      N   +     LD EV  FY + + A D G P     + I  +R+ D NDN+P F  A Y  +I EN    +PV +    I+ATD D + N  V YR  L  ++  Q A N   G++T     ++     LD +   R   + F V A D   +   S   V I ++D ND  P    + I         STI E  SI   +A V+  D DSG  G +        F +  G   K  +           +   +++     DRE        +   D     R     + +T        + D NDN P++ K  +     E         V +G + V    +D D G N      M  P  A   + +G + +    DRE  ++    + A    G     V++NV+I DEND +P F    Y+ + ++ +   T V  V A D+D    G + Y I  LP   F I   +G I  ++KLDRE++  Y +    ++ +  +    + T    ++++V D NDN P  +F   +    +  N P+G KV  + A D D   N  + Y +   G  +FSI+  +G   I ++ +++     + H+ + ASD G P   S A
Sbjct:   55 SDFTLDPNTGMIKTARNLERQQTFS---------YNLTIGAADHGLPSFSATTRVSIVVGDLNDNNPVFNPTNYSTTVFENSPVGTS-LLDVTATDADSGQNAYVTYSVTAGDSH---GLFRAVTKVSNHGTIEVAGNLDREVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPV-QMASSIMATDRDIESNADVRYR--LNGSDSIQFAVNPRTGVITT----RVSPPPSLDHE---RTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSI--------QSTISEAASIGQSVARVTANDPDSGLNGRIF-------FSINSGSEGKFEIG----------RSDGVVRVSGSLDREAKAVYVLNVSAIDGSYSPREGYGTVTVT--------LQDVNDNTPKFTKPAFNVDVSEG--------VAVGSVIVNATATDPDQGSNAAITYSMSYPGFAIN-SNTGSVTITRPLDRETKQAYSFTVHAR-DGGGLESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAILILP---FIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQP--QFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTG-GDGVFSIEPSTGQ--IRLQKAINREAKENYHVTITASDRGTPVLSSDA 730

HSP 2 Score: 141.354 bits (355), Expect = 5.372e-34
Identity = 163/648 (25.15%), Postives = 259/648 (39.97%), Query Frame = 3 
Query: 1275 PKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL--------QENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTI---RIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLT--------NQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIK---EFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTES-GELFLVLSFDREAMESNPVRIFASVSDGRYN-----QTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII 3131
            P F          E ++ R   +   +A D D   NG + Y +        + N DF       +  +  N+ R  Q F         Y + + A D G P  + T ++ I V D NDN P+F    Y  T+ EN PV   ++++ ATDADS +N  V Y  ++ + +   L   +  +   S  G I V   LD ++    + ++  ++A D G     SRT + I   RI+D ND  P  +        H   + +I EN               SGPG  V+   +          N ++   +N  +S+  + VN ++      I   +      D E   +  F +I  D       +         AE+V+ + D NDN P ++  P   +S  +   +  + V        D  L  R +  +       FE+  S G + +  S DREA     + +  S  DG Y+      TV++ +Q  D ND  P F+   +  +  E  +  + + +  ATD D      I Y +S P   F+INS +G + +T  LDRE K+ Y+  + A D                     D NDN P  +FP  Q    +    P+G  V  + A D D+  NG V+Y I+
Sbjct:    1 PVFTPASYNATFTEGSSTRGVLIATVKATDSDDGANGDVDYSIVDGNVGDPRSNSDFTLDPNTGMIKTARNLER-QQTFS--------YNLTIGAADHGLPSFSATTRVSIVVGDLNDNNPVFNPTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTY--SVTAGDSHGL---FRAVTKVSNHGTIEVAGNLDREVN---DFYNLTITATDGG--VPISRTAIAIALVRILDRNDNVPKFS--------HARYTGSIQEN---------------SGPGVPVQMASSIMATDRDIESNADVRYRLNGSDSIQ-FAVNPRTG----VITTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESL--------AEVVIHVLDANDNTPRFI--PSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNV--SAIDGSYSPREGYGTVTVTLQ--DVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPG--FAINSNTGSVTITRPLDRETKQAYSFTVHARDGGGLESNVAVNVEIG------DENDNSP--QFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAIL 577

HSP 3 Score: 137.502 bits (345), Expect = 6.796e-33
Identity = 171/682 (25.07%), Postives = 276/682 (40.47%), Query Frame = 3 
Query: 1257 DINDNTPKFNQPEIEHVVVENAN----ARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLGNRFY--HKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFA---SVSDGRYNQTVS---INVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNG 3257
            D NDN PKF+       + EN+      +++   +  A D D + N  + Y+L  +    F+   R  +      R+     LD+E    Y   ++A D          ++ I V D NDN P F  +  + TI E   + + V  + A D DS  NG++   F++ S ++ +          E G+    V+    +D   +   +   VSA D   SPR    TVT+ + DVND  P  T        + D S  +   S+   I   +  D D G    +   ++   F +                  S    + I +     DRE      F +  +D   L+ N            + V I DENDN P++    Y+    +  P      V   +L V+  D+D+GN  +  + ++I P     + ++G +      DRE      +  +    SV+D    Q  S   +N+ + D ND  P F+   Y    +EN    T V  V A D+DS I   I Y ++    +FSI   +G IR+   ++RE KE Y + I A D          +    V V VLD+NDN P +      +  + + N   G  V  + A D D++ NG V+Y I+     +F+I+  +G   I  +  L+        L+++A D G
Sbjct:  215 DRNDNVPKFSHARYTGSIQENSGPGVPVQMASSIM--ATDRDIESNADVRYRLNGSDSIQFAVNPRTGVI---TTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRI--FFSINSGSEGKF---------EIGRSDGVVRVSGSLDREAKA-VYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKFTKPAF----NVDVSEGVAVGSV---IVNATATDPDQGSNAAITYSMSYPGFAI-----------------NSNTGSVTITR---PLDRETKQAYSFTVHARDGGGLESN----------VAVNVEIGDENDNSPQFPTVQYQTDVIDRTP------VGTIVLAVNAEDRDVGNNGHVTYAILILP--FIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGDGVFSIEPSTGQIRLQKAINREAKENYHVTITASDRG----TPVLSSDAKVHVHVLDVNDN-PPVFTSRVYERTMSEGNAAAGEFVVQVNATDADVERNGHVTYTIMHGALGMFTINETTG--VIRTQGVLNRESKDFYTLIVMARDQG 827

HSP 4 Score: 93.9745 bits (232), Expect = 2.075e-19
Identity = 126/529 (23.82%), Postives = 217/529 (41.02%), Query Frame = 3 
Query: 1119 LKVKRSIDREEVCSKSSKNNDCILRLILVYGR-SKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYR-FALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFM--VSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSDGR-YNQTVSINVQILDENDLAPV 2684
            ++V  S+DRE            +L +  + G  S +  + +V++T+ D+NDNTPKF +P   +V V    A  S +    A DPD+  N  ITY +      I S    + I+            LD E ++ Y   + A D G  +    + + + + DENDN P F    Y+  +++  PV   V+ + A D D   NG V Y    LP           F IV ++  G I    KLD +         ++  +S  D+G +   S   + I + D ND +P             + S+T+ EN  +   +  V+  D+DSG    +   LT  +              ++ +  +    QI + K I   + +EN H+      +  P           L+++A++ V + D NDNPP +    YE    E      E  V++   + +D +      + +M      F + E +G +      +RE+ +   + + A       Y    +I+V ++D+ND  P+
Sbjct:  390 VRVSGSLDREAKAV-------YVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKFTKPAF-NVDVSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPGFAINSNTGSVTITRP----------LDRETKQAYSFTVHARDGGGLES--NVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAILILP-----------FIIVPDT--GNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQPQFN--------QSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGD-------------GVFSI--EPSTGQIRLQKAINR-EAKENYHVTITASDRGTP----------VLSSDAKVHVHVLDVNDNPPVFTSRVYERTMSEGNAAAGEFVVQVNATD-ADVERNGHVTYTIMHGALGMFTINETTGVIRTQGVLNRESKDFYTLIVMARDQGAVPYMDFGTIDVHVIDKNDNTPI 850
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: FAT4 (FAT atypical cadherin 4 [Source:NCBI gene;Acc:101165038])

HSP 1 Score: 204.142 bits (518), Expect = 2.711e-52
Identity = 217/758 (28.63%), Postives = 333/758 (43.93%), Query Frame = 3 
Query:  957 FGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLRLSNMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHV-VVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKF---YMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPII-TVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGG-IVECYLTNQ-NFEL--IQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFA-SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPS--PLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKD--GFNLFSIDSKSGNLF 3182
            F  +N  FV  E + P ++IG +             L     +   + +  +  +     IDREE            L+++   G     +F  V+ITV D+NDN P+F     EHV  VEN +     ++  +A DPD   NG + Y L+EN   +F           ++     L  L   ++     Y +E+ A D G PQ+T +L + I V D NDN P+F++  YE  I+E+ PV  +  ++ ATD DS  NG++ Y  A  +        + FGI  +   G++Y+K +LD ++    +R++ +V A D    P  +   VT+ + DVND RP+  + NY+    H  E     E    + +  V   DKD GP   I   + T Q NFEL  I G     +L L R                +   R+    +   ++   +  L R       L ++A++ V I D NDNPP++ K  Y+    E+ P N  + +++   +V +   G   YH    N    F + + SG++ LV   D E+  S  ++I A    D   + +  +++ ILDEND +P F   +   + +EN      V  V ATD DS     I Y I+  +    FSI+  +G I +  KLD E + FY + I A DN              V     D NDN P   F P      I  N P+   V T+ A D D   NG + Y I++     N F ID  SG ++
Sbjct:  770 FSQENYSFVMFENVSPGTVIGTVSATTVDLNSNISYLITSGDQRGLFAVNGAGQITASSLIDREE-------KGFYQLKVVARAGEITGEAF--VNITVRDLNDNAPRFLHAA-EHVSAVENWSTG-HIIFQAKASDPDEGLNGVVVYSLKENPKGLF-----------HIHEKHGLITLTGSLKASTNSYEVEVTASDMGVPQRTSSLSLIISVYDVNDNSPMFDQLSYEVIILESEPVNSRFFKVEATDKDSGLNGEIMYDIAGGNTG------DMFGIFPD---GQLYIKAELDREVQ---DRYNLVVVAKDRAVEPLSASVNVTVILDDVNDNRPLFNSTNYVF---HFKE-----EQQRGSLVGQVFAEDKDFGPNSEIRYSFETPQHNFELNTITG-ELTSTLKLDR----------------ESLMRQRGTAVLSFVVVSSDQGLPR------PLRDQAKVQVYIQDINDNPPKFTKDIYQASISESAP-NMTQLLRVSASDVDESKNGVVHYHIAEGNEEAQFTIDSSSGQVTLVGKLDYESSSSYLLKIIADDAGDVPLSSSCMLSISILDENDNSPSFPKSSLSVDVLENMRIGDLVVSVTATDADSGQNADITYSITAINNHGTFSISPNTGSIFLVKKLDYETQSFYKLNITAKDNGRPARSSSIPVVVYVR----DFNDNPP--VFAPGDIFKSIPENLPVSASVLTITAHDTDADINGQLEYSIVQQVPRGNYFGIDPSSGLIY 1455

HSP 2 Score: 183.726 bits (465), Expect = 5.388e-46
Identity = 197/732 (26.91%), Postives = 324/732 (44.26%), Query Frame = 3 
Query: 1215 SKKPSF-ISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGT--ITYKLQENKDFIFSQFFRLQIS--PDNVPRLMQLFL---LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFEL-IQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG---NRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSIN---VQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSP-----LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSA-VSVQIRLPFENPSEQSENN 3338
            S +P++   V I V D+NDN+P F    I     E+A +R   + L  A D D   NG    TY++ E  +    + FRL I+  P      + L     LD E+  FY + +   D G P+K G L++ + +QD NDN P+FE+  Y  ++ E+  V   +++I A+D D   N ++  R+ L      Q+         +   G I +K+ LD +       +   + A D G      RT  TI+++DVND  P++   Y        + +++ EN+ I   +A ++V D DS           N N  + I G N++    ++    KS    + +IK     DRE        +   D       N  P+  ++ A +V+ ++D ND+PP + +  Y     E+ P+    +     +  +D D G   N  Y  +  N    F +++ SG +      DRE   ++ + +  S  D      +S     V I D ND  P F+  TY  + +E++   T +  + A+D D    G I +     +P     LF +++ SG +    +LDRE++  Y + I A D  +            V++T+ D+NDN P   F P Q    +  N P G  V T+ A D DL  NG+V Y I       F I S +G +  +V  +L   + T+  L + A+D G  +  + A V+V +    +NP   S+ N
Sbjct:   97 SSQPTYPTEVRIVVLDMNDNSPVFPDASIVVSFKEDA-SRGRQVILDTATDADIGSNGVDHTTYRIVEGNE---QRKFRLDITVNPSGEGAFLHLVSTGGLDRELTPFYQLLIEVEDKGVPKKFGYLQVNVTIQDINDNPPVFEQDQYHSSVFEDAAVGSSILQITASDQDEGANAEI--RYILDEGTPFQI---------DPKTGTIVIKESLDFE---SKKEYSLTIHAADKGVPSLSGRTETTIKLLDVNDNDPVVKFRYFPTT---SKFASVDENAQIGTVVALLTVSDSDSPSA--------NGNISVSILGGNEQRHFEVH----KSTVPNLSLIKVASLLDRERISSYNLTVSVSD-------NGRPMARSSFASLVIFVNDINDHPPIFQEELYRVDISEDIPKGSYIKG----VSATDGDSGQNANLRYSLVSGNSLGWFSISDNSGLVTSAALLDREV--ASEIVLNISAKDQGLQPKISYTKLIVSITDVNDQVPTFTQSTYHVSLLEHAPAGTELLVLSASDSDLGPNGTIRFSFDAETPASLRELFRLDAVSGRLSTAVELDREDQASYLLHIRAADAGS----PPLHSVGRVNITLWDINDNRP--VFYPVQYFASVKENEPPGSYVTTVLASDRDLGRNGTVKYVISSGDTTKFHIHSNTGKITTLV--ALDREEKTAYQLQVRATDGGGLSSHTHAFVTVTVTDTQDNPPVFSQEN 774

HSP 3 Score: 154.451 bits (389), Expect = 3.842e-37
Identity = 194/672 (28.87%), Postives = 280/672 (41.67%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEET-----IMENIPVKEKVIEIVATDADS-DENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNS-PRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTE-------SGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVS-INVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLP-SPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK-DGFNLFSIDSKS 3170
            G  KK  ++ V++T+ DINDN P F Q +    V E+A A  S +    A D D   N  I Y L E   F        QI P     +++   LD+E +K Y + + A D G P  +G  +  I++ D NDN P+ +   +  T     + EN  +   V  +  +D+DS   NG ++    L  N Q+    +   +   S    I V   LD +   RI+ ++  VS  DNG    R S  ++ I + D+ND  PI            D S  IP+ S   YI  VS  D DSG           QN  L   +    SL  + ++D S      ++ +    DRE    I   I  KD     +  Q  I  T   +++V I D ND  P + +S Y     E+ P   E    L +L  SD DLG     +   +      L E       SG L   +  DRE   S  + I A+ +      +V  +N+ + D ND  PVF    Y  +  EN    ++V  V A+D+D    G ++Y IS   +  F I+S +G I     LDREEK  Y +Q+ A D            T TV+    D  DN P   F       V+  N   G  + T+ A   DL  N  +SY I   D   LF+++   
Sbjct:  211 GVPKKFGYLQVNVTIQDINDNPPVFEQDQYHSSVFEDA-AVGSSILQITASDQDEGANAEIRYILDEGTPF--------QIDPKTGTIVIKES-LDFESKKEYSLTIHAADKGVPSLSGRTETTIKLLDVNDNDPVVKFRYFPTTSKFASVDENAQIGTVVALLTVSDSDSPSANGNISVSI-LGGNEQRHFEVHKSTVPNLS---LIKVASLLDRE---RISSYNLTVSVSDNGRPMARSSFASLVIFVNDINDHPPIFQEELY----RVDISEDIPKGS---YIKGVSATDGDSG-----------QNANLRYSLVSGNSLGWFSISDNSG-----LVTSAALLDREVASEIVLNISAKD-----QGLQPKISYT---KLIVSITDVNDQVPTFTQSTYHVSLLEHAPAGTE----LLVLSASDSDLGPNGTIRFSFDAETPASLRELFRLDAVSGRLSTAVELDREDQASYLLHIRAADAGSPPLHSVGRVNITLWDINDNRPVFYPVQYFASVKENEPPGSYVTTVLASDRDLGRNGTVKYVISSGDTTKFHIHSNTGKITTLVALDREEKTAYQLQVRATDGGGLSSHTHAFVTVTVT----DTQDNPP--VFSQENYSFVMFENVSPGTVIGTVSATTVDLNSN--ISYLITSGDQRGLFAVNGAG 822

HSP 4 Score: 150.214 bits (378), Expect = 7.849e-36
Identity = 198/709 (27.93%), Postives = 307/709 (43.30%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVEN--ANARLSDLYLYEAEDPDRQENGTITYKLQE-NKDFIFSQFFRLQISPDNVPRLMQLFL---LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPR---INRFDFMVSACDNG-NSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSIN-NYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS----DKDLGNRF---YHKLMINPSQAFELT-ESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQIL--DENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISLPSP---LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGI 3260
            G  ++ S +S+ I+V D+NDN+P F+Q   E +++E+   N+R    +  EA D D   NG I Y +   N   +F  F      PD      QL++   LD EV+  Y + ++A D      + ++ + + + D NDN PLF    Y     E       V ++ A D D   N ++ Y F  P +N +         +T    G++    KLD +   R        F+V + D G   P   +  V + I D+ND  P  T +           ++I E++ N   +  VS  D D    G+V  ++   N E    I            D S  Q    +  + + D E +     KII  D  +        + L++   + + I DENDN P + KS       EN        +++G L VS    D D G      Y    IN    F ++  +G +FLV   D E      + I A   +GR  ++ SI V +   D ND  PVF+      +  EN   S  V  + A D D+DI G +EY I    P    F I+  SG+I  + ++DRE    + + + A D A      RR     V++ V DLNDN+P       Q  +V + N  IG  + T+ AFDPD + NG V Y++++   + F +D  SG++ +  +   S    T   L + A+D+GI
Sbjct:  948 GVPQRTSSLSLIISVYDVNDNSPMFDQLSYEVIILESEPVNSRF---FKVEATDKDSGLNGEIMYDIAGGNTGDMFGIF------PDG-----QLYIKAELDREVQDRYNLVVVAKDRAVEPLSASVNVTVILDDVNDNRPLFNSTNYVFHFKEEQQRGSLVGQVFAEDKDFGPNSEIRYSFETPQHNFE------LNTIT----GELTSTLKLDRESLMRQRGTAVLSFVVVSSDQGLPRPLRDQAKVQVYIQDINDNPPKFTKDIY--------QASISESAPNMTQLLRVSASDVDESKNGVVHYHIAEGNEEAQFTI------------DSSSGQ----VTLVGKLDYESSSSYLLKIIADDAGD--------VPLSSSCMLSISILDENDNSPSFPKSSLSVDVLEN--------MRIGDLVVSVTATDADSGQNADITYSITAINNHGTFSISPNTGSIFLVKKLDYETQSFYKLNITAK-DNGRPARSSSIPVVVYVRDFNDNPPVFAPGDIFKSIPENLPVSASVLTITAHDTDADINGQLEYSIVQQVPRGNYFGIDPSSGLIYTSKEIDREFSNLFELTVKATDQA-VPVEFRRFALKNVTIWVTDLNDNFPTFV---SQNALVAEPNIVIGSILTTLVAFDPDDEANGEVEYELVEGDSDTFIMDRYSGDIRLASQLVPSRLMYT---LTVSATDHGI 1584

HSP 5 Score: 144.821 bits (364), Expect = 3.888e-34
Identity = 189/777 (24.32%), Postives = 319/777 (41.06%), Query Frame = 3 
Query: 1089 SDYFLLHSSYLKV--KRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVN--DINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELI-----------QGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNR---FYHKLMINPSQAFELT-ESGELFLVLSFDREAMESNPVRIFASVSD---GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDS-DIYGPIEYKI--SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKEN-GSVSYKIIKDG--FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSA-VSVQIRLPFENPSE 3323
            S+YF +++S  +V  K+ +  +     SS N +    ++    R+ KP     ++ +N  D NDN P F        V ++       + +   ++ D   N  I Y +        S  F L    D     + +F  L  EV K ++M + A D GNP  +    ++I V +EN + P F ++    T+ E++ V   +  + A D D + NG + Y     ++N           +  S  G + +   LD +      + +  VSA D G   + S  +VTI++ DVND  PI   +        +   T+ EN      +  ++  D+DSGP  ++   + + + +L            QG  D E+  +Y +              +K F+  + D   F      N N+Q                  +   N+  P ++   Y F+  E  P    K   +G +  SD+D G     +Y     + ++ F +  ++G++++    DRE  E   +++ A  +    G     V +N+ ILD ND  PVF+ D Y     E  S    V  V+A D DS   +    Y I   L   +F+IN K+G + V  +LDRE    Y + +LA+D       G  T    +     D+NDN P +          +  N   G  V T+ A DPDL  N G   Y ++  G   N FS+ S      +     +   Q++  +L ++  D+G+P   S+  V V++    +NPSE
Sbjct: 2896 SEYFRINASTGEVFVKQQLKYQNSTGASSLNINRHSFIVTASDRAVKPLISETTVILNIVDSNDNPPVFESLSYFTPVTKSVKVGTRLMRVVAHDEKDFGLNSEIEYLITGGNS---SSKFVL----DKTSGWITVFSSLVSEVNKIFLMNVTAKDKGNPPLSANTAVRIAVTEENHHTPEFSQSQISATVPESLAVGTAIRTVSAKDKDKEMNGLITYNITSGNDNGV--------FMLNSKTGVLSLANPLDFE---EKQQHELRVSAIDGGWIAKTSYVSVTIQVTDVNDNPPIFDPD--------EYFPTVQENVPSGTTVVRMNATDRDSGPNAVMAYVIQSSDSDLFVIDPNTGIITTQGFLDYEAKQVYHL-------------TVKAFNIPDEDRCSFA-----NVNIQ------------------LKGANEYVPRFVSKQYYFEVSEAAP----KGTVVGEVFASDRDQGEDGVVYYLIFGKSRNKGFSINKKTGQIYVTGMLDREKEEKISLKVLAKNAGSIRGADIDEVFVNITILDAND-PPVFTQDLYDVQVSEGLSPGDLVTFVKADDSDSVPSWSRFSYFIDPELTKNMFTINPKTGQVSVAAELDRETTPVYNLTVLAVDTGTPPATGIATVIVNLE----DINDNGPTLT----TTYAEVMENQRAGTAVATLTASDPDLPPNQGPFLYSLMNSGPANNCFSLSSTG---VLTTSQEIDREQISDFYLHVMIKDSGVPQMSSTGTVHVKVNDQNDNPSE 3594

HSP 6 Score: 143.665 bits (361), Expect = 8.821e-34
Identity = 191/748 (25.53%), Postives = 315/748 (42.11%), Query Frame = 3 
Query: 1095 YFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFI---SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQK-TGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKL----DIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQN--PIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL-----GNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT-VSINVQILDENDLAPVFSLDTYRFNCVENSFSTF-VGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLS-ENQLTSSHL-------VLVASDNGI 3260
            + L  +  L V +++DRE     +         L++    S  P+     +V++ V+D+NDN P F+       + E+A    +D+ L  + D D   NG ++Y+L         QF    I+P    +++   LLD E R  Y + ++A D G P+  + +  + + V D NDN P F    Y   I  +      V  +  TD D+  N ++ Y  +L   N ++   +         +G I   ++L    ++ L  R+          D G +PR   TTVT+R +   +F PII V         +   + PEN  NN++  V+ V   S  GG +  Y+ + N +           N + ++  S +  I                + ++ I K    ++  +Q   P     + EI VL  D NDN P + K P+  +  EN P          +L VS  DL     G   Y  +  N    F +   +GE+      DRE +    +++ A+        T V + V++LD ND AP FS   +     EN+   + V  V  TD+D+       Y ++     FSIN  +G I +   L+REE + Y +++ A D+         T +T V++ + D+NDN P  +F  P   +       IG  V  + A DPD   NG + Y  I+     F I++ +G +F  VK  L  +N   +S L       ++ ASD  +
Sbjct: 2287 FTLSSAGQLSVTKTLDREFGAEYT---------LLITATDSGSPALSGTGTVTVLVDDVNDNVPVFSSSTFHTTIAEDAPTG-TDVLLVNSSDADVGINGAVSYRLSGGH----GQF---SINP-ATGQIISSALLDREERANYQLLVVATDGGQPKGLSSSATVSVTVADINDNPPRFHHHPYVTHIPASTAAGALVFAVTVTDEDAGSNAQLQY--SLMGRNAEKFKIDPV-------RGAITASERLTGSSEVTLAVRVK---------DGGTNPRTDSTTVTVRFVPGGNF-PIIKVK--------ERLFSFPENQPNNHV--VTTVTGSSLRGGPLSFYIASGNLD-----------NAFHIDQLSGELSI-------------RHPLDYECIQKYVLWIEARDQGFPPYSSYEKVEITVL--DVNDNLPVFDKDPFNAEILENLPPQQ-------VLLVSAVDLDKGSNGQLEYAIIDGNKDNIFSIHRATGEIRTNRPLDREKVALYSLKVKATDRGSPPKSTSVKVLVRVLDVNDNAPRFS-KIFSATVAENAPVGYTVTRVTTTDEDAGSNAISRYSLTDSGLPFSINPNTGDITINRPLNREETDHYIVKVSAHDSG-------WTVSTDVTIFITDVNDNVP--RFTRPSYYLEYPELTEIGSLVTQVSAVDPDEGFNGKIFY-FIRSQSEYFRINASTGEVF--VKQQLKYQNSTGASSLNINRHSFIVTASDRAV 2941

HSP 7 Score: 142.124 bits (357), Expect = 2.735e-33
Identity = 187/753 (24.83%), Postives = 299/753 (39.71%), Query Frame = 3 
Query: 1080 FKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITV-NYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG--NRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISL--PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVK---HSLSENQLTSS-HLVLVASDNGIPTPKSSAVSVQIRL 3302
            F  SD   L +S   + R +  E V + S+K+           G   K S+  + +++ D+ND  P F Q      ++E+A A  ++L +  A D D   NGTI +           + FRL        RL     LD E +  Y++ + A D G+P      ++ I + D NDN P+F    Y  ++ EN P    V  ++A+D D   NG V Y  +     +  +  N          GKI     LD +       +   V A D G     +   VT+ + D  D  P+ +  NY         S  + EN S    I  VS    D            N N   +  I   +   L+ VN   Q     +I      DREE    + K++ +             ++T EA + + + D NDN P +L +     + EN          +   + SD D G      + L  NP   F + E   L  +    + +  S  V + AS +   +   ++S+ + + D ND +P+F   +Y    +E+   ++    VEATD+DS + G I Y I+      +F I    G + +  +LDRE ++ Y + ++A D A E        T  +     D+NDN P   F     +         G  V  + A D D   N  + Y       N F +++ +G L   +K    SL   + T+    V+V+SD G+P P      VQ+ +
Sbjct:  501 FSISDNSGLVTSAALLDREVASEIVLNISAKDQ----------GLQPKISYTKLIVSITDVNDQVPTFTQSTYHVSLLEHAPAG-TELLVLSASDSDLGPNGTIRFSFDAETPASLRELFRLDAVSG---RLSTAVELDREDQASYLLHIRAADAGSPPLHSVGRVNITLWDINDNRPVFYPVQYFASVKENEPPGSYVTTVLASDRDLGRNGTVKYVISSGDTTKFHIHSN---------TGKITTLVALDRE---EKTAYQLQVRATDGGGLSSHTHAFVTVTVTDTQDNPPVFSQENY---------SFVMFENVSPGTVIGTVSATTVD-----------LNSNISYL--ITSGDQRGLFAVNGAGQITASSLI------DREEKGFYQLKVVARAG-----------EITGEAFVNITVRDLNDNAPRFLHAAEHVSAVENWSTGH----IIFQAKASDPDEGLNGVVVYSLKENPKGLFHIHEKHGLITLTGSLKASTNSYEVEVTASDMGVPQRTSSLSLIISVYDVNDNSPMFDQLSYEVIILESEPVNSRFFKVEATDKDSGLNGEIMYDIAGGNTGDMFGI-FPDGQLYIKAELDREVQDRYNLVVVAKDRAVEPLSASVNVTVILD----DVNDNRPL--FNSTNYVFHFKEEQQRGSLVGQVFAEDKDFGPNSEIRYSFETPQHN-FELNTITGELTSTLKLDRESLMRQRGTAVLSFVVVSSDQGLPRPLRDQAKVQVYI 1176

HSP 8 Score: 140.198 bits (352), Expect = 1.029e-32
Identity = 188/713 (26.37%), Postives = 289/713 (40.53%), Query Frame = 3 
Query: 1227 SFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQEN---KDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNP----QKTGTLKIKIRVQDENDNLPLF--EKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEF---KSYENRPRNDEKRVKLGILEV--SDKDLGNRFYHKLMINPSQ---AFELTESGELFLVLSFDREAMESNPVRIFASVSDG-RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVL-VASDNGIPTPKSSAVSVQIRL 3302
            S + V   V DINDN P F+       V E+     S +   EA D D   N  + YK+        F+ ++   LQ              LD E + FY + ++ V+D  P    + T T ++ I + D ND  P+F  +K  Y   I EN PV   V    ATDADS  N  V Y        Q Q   N F I T    G + +  +LD +    ++ +   V A D G  P  S   VT+ ++DVND  P  + N             + EN +    +  V   D D G  G +        F +  G  + +    +R+     D    +I   K  DRE        +   D  +  R         + A + +++ D ND  P +  SPY     ++ EN P++        IL+V   D D G       M++      AF L+ +G+L +  + DRE      + I A+ S     + T ++ V + D ND  PVFS  T+     E++   T V  V ++D D  I G + Y++S     FSIN  +G I  +  LDREE+  Y + ++A D    +        +       D+NDN P+    P   +  I ++   G  VF +   D D   N  + Y ++      F ID   G +      + SE    SS + L V   +G   P++ + +V +R 
Sbjct: 1905 STVRVYFNVLDINDNPPVFSSSAYSTSVSESLPPG-SSIVTVEASDGDDGANAQLLYKIASGDPQGHFVITKEGVLQTQK----------ALDRESQSFYNL-VITVNDLAPPPAARFTSTAQVSIILLDVNDCPPIFTSQKTTY---IQENTPVDTVVFTAQATDADSGPNSYVEYSL----RGQHQ---NKFIIGTV--DGDVRLIGELDRE---ELSNYTVTVVATDKGVPPLSSSMDVTMIVLDVNDNTPSFSQNIY--------DIEVEENILTGTDVIQVFASDADDGSNGQIR-------FSISSGNTNSD----FRI-----DSVTGVISVAKRLDRETRSAYSLVVQAADRGSSPR--------VDHATVNIVLLDVNDCSPLFELSPYTINVQENLENLPKD--------ILQVVARDDDQGANSQLSYMLSGGDEEGAFTLSSAGQLSVTKTLDREFGAEYTLLITATDSGSPALSGTGTVTVLVDDVNDNVPVFSSSTFHTTIAEDAPTGTDVLLVNSSDADVGINGAVSYRLSGGHGQFSINPATGQIISSALLDREERANYQLLVVATDGGQPKGLSSSATVSVTVA---DINDNPPRFHHHP--YVTHIPASTAAGALVFAVTVTDEDAGSNAQLQYSLMGRNAEKFKIDPVRGAI------TASERLTGSSEVTLAVRVKDGGTNPRTDSTTVTVRF 2539

HSP 9 Score: 132.494 bits (332), Expect = 2.152e-30
Identity = 199/806 (24.69%), Postives = 326/806 (40.45%), Query Frame = 3 
Query:  957 FGCKNVHFVTTEELHPNSLIG-------DLKPYLSSEMLQTLRLSNMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFI----SVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTES-GKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEA--EIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEV-----SDKDLGNRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIF-----ASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKI----------SLPSPLFSINSKSGMIRVTTKLDREE-KEFYAIQILAID-NANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNG 3257
            F   N  F   EE    SL+G       D  P  +SE+  +      NF+ +      +S LK    +DRE +  +       +L  ++V      P  +     V + + DINDN PKF + +I    +  +   ++ L    A D D  +NG + Y + E  +      F +  S   V  + +L   DYE    Y+++++A D G+   + +  + I + DENDN P F K+     ++EN+ + + V+ + ATDADS +N  + Y            A N  G  + S   G I++ +KLD +     + +   ++A DNG   R S   V + + D ND  P+           GD   +IPEN  ++  +  ++  D D+   G +E  +  Q               + R N    D    +I   KE DRE ++  +  +   D          P++    A   + + + D NDN P ++         +N    +   V   IL        D +      ++L+   S  F +   SG++       R A +  P R+      ++   G   +T    + I+ E    P+FS   Y     E     T V  + A        G +EY I               LFSI   SG+I+   +LDRE+  + Y + + AI+ +AN+    R     T+     D+NDN P   F      V I+ N   G K+  + A D D   N  V+Y II    + F ID +SG+L    K    + +  S + +LV +D+G
Sbjct: 1076 FNSTNYVFHFKEEQQRGSLVGQVFAEDKDFGP--NSEIRYSFETPQHNFELNTITGELTSTLK----LDRESLMRQRGT---AVLSFVVVSSDQGLPRPLRDQAKVQVYIQDINDNPPKFTK-DIYQASISESAPNMTQLLRVSASDVDESKNGVVHYHIAEGNE---EAQFTIDSSSGQVTLVGKL---DYESSSSYLLKIIADDAGDVPLSSSCMLSISILDENDNSPSFPKSSLSVDVLENMRIGDLVVSVTATDADSGQNADITYSIT---------AINNHGTFSISPNTGSIFLVKKLDYETQ---SFYKLNITAKDNGRPARSSSIPVVVYVRDFNDNPPVF--------APGDIFKSIPENLPVSASVLTITAHDTDADINGQLEYSIVQQ---------------VPRGNYFGIDPSSGLIYTSKEIDREFSNLFELTVKATDQ-------AVPVEFRRFALKNVTIWVTDLNDNFPTFVS--------QNALVAEPNIVIGSILTTLVAFDPDDEANGEVEYELVEGDSDTFIMDRYSGDI-------RLASQLVPSRLMYTLTVSATDHGIDRKTSKTELTIILEGADGPIFSQPKYITVLKEGQPPGTNVISLNAVSPRGP-KGKVEYFIVAVRSGESGGKAMGRLFSIGRHSGVIQTAAELDREQGSDLYVLDVYAIETDANQPRTQRTEVEITLQ----DINDNPP--VFANDVLDVTIEENIIDGFKIMQLTAKDADEGPNALVTYTIISGADDSFRIDPESGDLIATKKL---DRERRSKYSLLVRADDG 1798

HSP 10 Score: 129.028 bits (323), Expect = 2.364e-29
Identity = 161/622 (25.88%), Postives = 266/622 (42.77%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG-NRFYHKLMINPSQAFELTES-GELFLVL------SFDREAMESNPVRIFASVSDGRYNQTVS---INVQILDENDLAPVFSLDTYRFNCVENS--FSTFVGHVEATDQ-DSDIYGPIEYKISL--PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFN-LFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            LDYE  + Y++ + A D G P  +   K++I V D NDNLP+F+K  +   I+EN+P  ++V+ + A D D   NG++ Y  A+   N+     N F I      G+I   + LD +   ++  +   V A D G+ P+ +   V +R++DVND  P  +  +         S+T+ EN+   Y +  V+  D+D+G   I    LT+                 + +N  + D  I      +  +REE DH   K+   D+             T   ++ + I D NDN P + +  Y    Y   P   E    +  +   D D G N      + + S+ F +  S GE+F+        S    ++  N      + SD      +S   + + I+D ND  PVF   +Y F  V  S    T +  V A D+ D  +   IEY I+    S  F ++  SG I V + L  E  + + + + A D  N            V+       +N+   +F   Q    +  +  +G  + T+ A D D + NG ++Y I     N +F ++SK+G L +       E Q    H + V++ +G    K+S VSV I++
Sbjct: 2608 LDYECIQKYVLWIEARDQGFPPYSSYEKVEITVLDVNDNLPVFDKDPFNAEILENLP-PQQVLLVSAVDLDKGSNGQLEY--AIIDGNKD----NIFSI--HRATGEIRTNRPLDRE---KVALYSLKVKATDRGSPPKSTSVKVLVRVLDVNDNAPRFSKIF---------SATVAENAPVGYTVTRVTTTDEDAGSNAISRYSLTDSGLP-------------FSINPNTGDITIN-----RPLNREETDHYIVKVSAHDS-----------GWTVSTDVTIFITDVNDNVPRFTRPSY----YLEYPELTEIGSLVTQVSAVDPDEGFNGKIFYFIRSQSEYFRINASTGEVFVKQQLKYQNSTGASSLNINRHSFIVTASDRAVKPLISETTVILNIVDSNDNPPVFESLSY-FTPVTKSVKVGTRLMRVVAHDEKDFGLNSEIEYLITGGNSSSKFVLDKTSGWITVFSSLVSEVNKIFLMNVTAKDKGNPPLSANTAVRIAVT------EENHHTPEFSQSQISATVPESLAVGTAIRTVSAKDKDKEMNGLITYNITSGNDNGVFMLNSKTGVLSLANPLDFEEKQ---QHELRVSAIDGGWIAKTSYVSVTIQV 3165

HSP 11 Score: 125.561 bits (314), Expect = 3.071e-28
Identity = 184/754 (24.40%), Postives = 309/754 (40.98%), Query Frame = 3 
Query: 1095 YFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL--QENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG---------NRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDG----RYNQTVSINVQILDENDLAPVFSLDTYRFNC-VENSFSTFVGHVEATDQDSDIYGPIEYKI-SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGF-NLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            + +     L+ ++++DRE   S+S  N    +  +     ++  S   VSI + D+ND  P F   +  ++  EN     + ++  +A D D   N  + Y L  Q    FI           D   RL+    LD E    Y + ++A D G P  + ++ + + V D NDN P F + +Y+  + ENI     VI++ A+DAD   NG++  RF++ S N      + F I  +S  G I V ++LD +     + +  +V A D G+SPR    TV I ++DVND  P+  ++  T N        + EN  N     + VV +D   G        +Q   ++ G +++ +  L      S   Q+ + K +   DRE        I   D+            L+    + VL+DD NDN P +  S +     E+ P   +    + ++  SD D+G         +  + +  INP+       +G++      DRE  E    ++    +DG      + + +++V + D ND  P F    Y  +     +    V  V  TD+D+     ++Y +    +  F I+   G I  + +L    +   A+++       +  G      +T          N+P IK    ++L     N P  H V T+          G +S+ I      N F ID  SG L I  +H L    +    L + A D G P P SS   V+I +
Sbjct: 1971 FVITKEGVLQTQKALDRE---SQSFYNLVITVNDLAPPPAARFTSTAQVSIILLDVNDCPPIFTSQKTTYIQ-ENTPVD-TVVFTAQATDADSGPNSYVEYSLRGQHQNKFIIGTV-------DGDVRLIGE--LDREELSNYTVTVVATDKGVPPLSSSMDVTMIVLDVNDNTPSFSQNIYDIEVEENILTGTDVIQVFASDADDGSNGQI--RFSISSGNTN----SDFRI--DSVTGVISVAKRLDRETR---SAYSLVVQAADRGSSPRVDHATVNIVLLDVNDCSPLFELSPYTIN--------VQENLENLPKDILQVVARDDDQGA------NSQLSYMLSGGDEEGAFTL------SSAGQLSVTKTL---DREFGAEYTLLITATDS--------GSPALSGTGTVTVLVDDVNDNVPVFSSSTFHTTIAEDAPTGTD----VLLVNSSDADVGINGAVSYRLSGGHGQFSINPA-------TGQIISSALLDRE--ERANYQLLVVATDGGQPKGLSSSATVSVTVADINDNPPRFHHHPYVTHIPASTAAGALVFAVTVTDEDAGSNAQLQYSLMGRNAEKFKIDPVRGAITASERLTGSSEVTLAVRV-------KDGGTNPRTDSTTVTVRFVPGGNFPIIKV--KERLFSFPENQPNNHVVTTVTGSS---LRGGPLSFYIASGNLDNAFHIDQLSGELSI--RHPLDYECIQKYVLWIEARDQGFP-PYSSYEKVEITV 2640

HSP 12 Score: 115.161 bits (287), Expect = 4.478e-25
Identity = 165/652 (25.31%), Postives = 264/652 (40.49%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNP---QKTGTLKIKIRVQDENDNLPLF--EKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLN-LYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG--NRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKISL--PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKI 3128
            GR  + S I V + V D NDN P F   +I   + EN     S L +  A D D   NG + Y + +        +F +  S   +    ++   D E    + + + A D   P   ++     + I V D NDN P F  + AL  E    NI +   +  +VA D D + NG+V Y   +  ++   +   Y G +            +L   L P    +   VSA D+G   + S+T +TI I++  D        YIT    G    T       N I+  +V  +  GP G VE ++      +  G +  +++  L+ +   S      +I+   E DRE+       +   D   ++ +   P   T   E+ + + D NDNPP +     +    EN         K+  L   D D G      + ++     +F +  ESG+L      DRE    +   +     DG+ +  + +N+ + D ND  P FS  TY F+  E+ +  + V  + A+D DS++ G + Y +        F +N  +G+  VT  LD E + +Y +   A D            T  V   VLD+NDN P   F        +  + P G  + T+EA D D   N  + YKI
Sbjct: 1372 GRPARSSSIPVVVYVRDFNDNPPVFAPGDIFKSIPENLPVSASVLTI-TAHDTDADINGQLEYSIVQQ--VPRGNYFGIDPSSGLIYTSKEI---DREFSNLFELTVKATDQAVPVEFRRFALKNVTIWVTDLNDNFPTFVSQNALVAE---PNIVIGSILTTLVAFDPDDEANGEVEYEL-VEGDSDTFIMDRYSGDI------------RLASQLVPSRLMYTLTVSATDHGIDRKTSKTELTI-ILEGADGPIFSQPKYITVLKEGQPPGT-------NVISLNAVSPR--GPKGKVEYFIV----AVRSGESGGKAMGRLFSIGRHSG-----VIQTAAELDREQGS----DLYVLDVYAIETDANQP--RTQRTEVEITLQDINDNPPVFANDVLDVTIEENIIDG----FKIMQLTAKDADEGPNALVTYTIISGADDSFRIDPESGDLIATKKLDRE--RRSKYSLLVRADDGKQSSDMRLNITVKDVNDHTPKFSRPTYSFDIPEDVTPGSIVEVILASDSDSELNGEVNYSLEEDDEDGTFLLNPVTGVFNVTRALDYETQRYYILTAKAHDGGG------LASTVRVYFNVLDINDNPP--VFSSSAYSTSVSESLPPGSSIVTVEASDGDDGANAQLLYKI 1962

HSP 13 Score: 111.694 bits (278), Expect = 4.110e-24
Identity = 176/732 (24.04%), Postives = 306/732 (41.80%), Query Frame = 3 
Query: 1107 HSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSF--ISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFEL---TESGELFLVLSFDREAMESNPVRIFASVSD-GRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISL--PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKII-KDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPT 3266
            HS  ++    +DRE+       ++  +L +  +   + +P      V IT+ DINDN P F    ++  + EN       + L  A+D D   N  +TY +    D  F      +I P++   L+    LD E R  Y + L+  DDG  +++  +++ I V+D ND+ P F +  Y   I E++     V  I+A+D+DS+ NG+VNY       +   L     G+          V + LD +      R+  + +   +G     S   V   ++D+ND  P+    + ++      S ++P  S    I  V   D D G            N +L+  I   +    + +  +       +++  K  DRE        I   D   P   R        T+ A++ +++ D ND PP +      +   EN P +      +   + +D D G   Y +  +      +    T  G++ L+   DRE + +  V + A+       + ++ + + +LD ND  P FS + Y     EN  + T V  V A+D D    G I + IS    +  F I+S +G+I V  +LDRE +  Y++ + A D  +      R    TV++ +LD+ND  P  +   P  + V ++   +   +  + A D D   N  +SY +   D    F++ S +G L   V  +L         L++ A+D+G P 
Sbjct: 1665 HSGVIQTAAELDREQ------GSDLYVLDVYAIETDANQPRTQRTEVEITLQDINDNPPVFANDVLDVTIEENIIDGFKIMQL-TAKDADEGPNALVTYTIISGADDSF------RIDPES-GDLIATKKLDRERRSKYSL-LVRADDG--KQSSDMRLNITVKDVNDHTPKFSRPTYSFDIPEDVTPGSIVEVILASDSDSELNGEVNYSLEEDDEDGTFLLNPVTGVFN--------VTRALDYE----TQRYYILTAKAHDGGG-LASTVRVYFNVLDINDNPPV----FSSSAYSTSVSESLPPGS---SIVTVEASDGDDG-----------ANAQLLYKIASGDPQGHFVITKEG------VLQTQKALDRESQSFYNLVITVNDLAPPPAAR-------FTSTAQVSIILLDVNDCPPIFTSQKTTYIQ-ENTPVD----TVVFTAQATDADSGPNSYVEYSLRGQHQNKFIIGTVDGDVRLIGELDREELSNYTVTVVATDKGVPPLSSSMDVTMIVLDVNDNTPSFSQNIYDIEVEENILTGTDVIQVFASDADDGSNGQIRFSISSGNTNSDFRIDSVTGVISVAKRLDRETRSAYSLVVQAADRGS----SPRVDHATVNIVLLDVNDCSPLFEL-SPYTINVQENLENLPKDILQVVARDDDQGANSQLSYMLSGGDEEGAFTL-SSAGQL--SVTKTLDREFGAEYTLLITATDSGSPA 2322

HSP 14 Score: 109.768 bits (273), Expect = 1.766e-23
Identity = 190/719 (26.43%), Postives = 287/719 (39.92%), Query Frame = 3 
Query: 1098 FLLH--SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVN--DINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTP-----RINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPII-TVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDL-----GNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT--VSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKI-SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFN-LFSIDSKSGNLFI 3185
            F +H  +  ++  R +DRE+V   S K        +    R   P   SV + V   D+NDN P+F++      V ENA    + +      D D   N    Y L ++            I+P N   +     L+ E    Y++++ A D G    T +  + I + D NDN+P F +  Y     E   +   V ++ A D D   NGK+ Y     S         YF I   +  G+++VKQ+L    +       INR  F+V+A D    P  S TTV + I+D ND  P+  +++Y T      +  T         +  V+  +KD G        L ++   LI G N      L        D+    I        E N      +  KD  NP L  N    I +T          +EN + PE+ +S       E+        V   I  VS KD      G   Y+    N +  F L +++G L L    D E  + + +R+ A +  G   +T  VS+ +Q+ D ND  P+F  D Y     EN  S T V  + ATD+DS     + Y I S  S LF I+  +G+I     LD E K+ Y + + A +  +E           +       N+  P  +F   Q    +    P G  V  + A D D  E+G V Y I     N  FSI+ K+G +++
Sbjct: 2697 FSIHRATGEIRTNRPLDREKVALYSLK--------VKATDRGSPPKSTSVKVLVRVLDVNDNAPRFSK-IFSATVAENAPVGYT-VTRVTTTDEDAGSNAISRYSLTDSG-------LPFSINP-NTGDITINRPLNREETDHYIVKVSAHDSG---WTVSTDVTIFITDVNDNVPRFTRPSYYLEYPELTEIGSLVTQVSAVDPDEGFNGKIFYFIRSQS--------EYFRI--NASTGEVFVKQQLKYQNSTGASSLNINRHSFIVTASDRAVKPLISETTVILNIVDSNDNPPVFESLSYFTPVTKSVKVGT-------RLMRVVAHDEKDFG--------LNSEIEYLITGGNSSSKFVL--------DKTSGWITVFSSLVSEVNKIFLMNVTAKDKGNPPLSANTAVRIAVT----------EENHHTPEFSQSQISATVPESL------AVGTAIRTVSAKDKDKEMNGLITYNITSGNDNGVFMLNSKTGVLSLANPLDFEEKQQHELRVSA-IDGGWIAKTSYVSVTIQVTDVNDNPPIFDPDEYFPTVQENVPSGTTVVRMNATDRDSGPNAVMAYVIQSSDSDLFVIDPNTGIITTQGFLDYEAKQVYHLTVKAFNIPDEDRCSFANVNIQLKGA----NEYVP--RFVSKQYYFEVSEAAPKGTVVGEVFASDRDQGEDGVVYYLIFGKSRNKGFSINKKTGQIYV 3338
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: ENSORLT00000005325.2 (protocadherin-16 [Source:NCBI gene;Acc:101171352])

HSP 1 Score: 201.445 bits (511), Expect = 1.593e-51
Identity = 210/718 (29.25%), Postives = 342/718 (47.63%), Query Frame = 3 
Query: 1233 ISVSITVNDINDNTPKFNQPEI-----EHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQL-----FLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSI-NNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDN--PNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLG--ILEVS--DKDLG-NRFYHKLMINPSQAFELTE-SGELFLVLSFDREAMESNPVRIFASVSDGR--YNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPL-----FSINSKSGMIRVTTKLDREEK-EFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFN-LFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASD-NGIPTPKSSAVSVQI 3296
            I VSITVNDIND+ P+F + +      EH VV     R S   L  A D D+ +  T  Y ++E         F+L+ S  +  +++ L      LLD E R  Y + + A D G+P++ G + +++ V D ND+ P+F ++ Y   I E++P    ++++ A D D  +NG V Y      N +Q     YF I  +S  G I + + LD +L  R++  + +V A DN + P  +   VTI + D ND +P +T+ +++ +G    S  I E +    Y+A +SV D D G          N N  L +G + K +L        ++D  IY+I   +  DREE D    +++  D+  P L+  +   IQ+T          D NDNPP + +  Y         +   + V  G  +L+V+  DKD G N      ++   + F +   +G +    + D E+  +  V + A+   GR   + T  +++ + D ND APVFS + Y  +  EN+   T    V ATD+D   +G I Y ++L S       F+IN ++G +   + LDR+E  E Y + + A D          +    V V V+D+NDN P   F P    V + ++   G  V  + A DPD  ENG ++Y+ +  G +  F+++  +G   I +  SL     T   +V+ A D +G+  P ++ V+V I
Sbjct:  110 IEVSITVNDINDHAPEFPKKKALLKIPEHTVV---GTRFS---LDPATDADKDQLTTQGYAIKEGN---VGHMFKLE-SKRSANKVLYLDLVVSGLLDREKRSSYSLVIEAFDGGSPRRVGFMTLEVTVTDINDHAPVFNQSRYHAIISESLPQGSSILQVFAADEDEGDNGLVLYEI----NRRQSDPERYFVIDLKS--GVITLNRPLDYELK-RVH--ELVVQARDNASQPEVTNAFVTIHVRDFNDNQPTMTIIFLSEDG----SPRISEGAQPGQYVARISVTDPDYGE-------YANVNVSL-EGGDGKFALT-------TKDSIIYLIYVDQVLDREERDSYDLRVMATDSGTPPLRAESSFTIQVT----------DVNDNPPLFDQQAYR--------QTIPEVVYPGSFVLQVTARDKDQGPNGDVRYSLLKGKKWFSIDPITGIITTATALDFESEPAPSVTVIAT-DGGRPPLSSTAKVDIVVQDVNDNAPVFSSNFYNVSVKENTPAGTCFLEVSATDEDRGSFGTITYALTLKSGGTVQTPFTINKQTGQLCTASALDRDEGLEKYDLTVTATDGGG------LSSAVGVRVKVMDINDNRP--TFYPVLYTVSLSTHSAPGTSVVKVTANDPDAGENGRITYRTVPGGSSPFFTLNKDTG--VISLSRSLHSKANTVISMVITAVDGDGLTAPVNARVNVSI 760

HSP 2 Score: 159.844 bits (403), Expect = 8.515e-39
Identity = 187/742 (25.20%), Postives = 309/742 (41.64%), Query Frame = 3 
Query: 1083 KTSDYFLLH--SSYLKVKRSIDREEV--CSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESG------KGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQ----AFELTE-SGELFLVLSFDREAMESNPVRIFA-----SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK-DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVA 3245
            +TSD   L   S  L +++ +DRE         +  D  + L       ++   ++  + V D NDN P F+ P    V+ E+       L++  A D D  ENG ++Y++Q   +       R  +SP N   L  L  LD E ++ + + ++A D G PQ + +  + ++V D ND  P+F++A +   +MEN      V+++ ATD D   NG + Y                 G VTE G       G I   ++LD +L    N +   V A D G  P  ++  V + + DVND  P+    +     +G E   +PEN     +  V   D DSGPGG +E       +++  G  D +    ++++ ++       +      DRE+      +++  D        +    L+  A + V + D NDN P + K+ Y  +  EN     +      +L+VS  D+      K++   SQ    AF + E +G +      DRE + S   R+FA     SV     N +  + V ILD ND AP F  D              +  ++A D+D    G + Y+ + P   FSINS +G I+ T  L    +    + + A+D  +  +         V     +       I+F    + V I  N   G  V   +A  PD    G +SY +   +  +LF I S +G +++   + L   +     LV+ A
Sbjct: 1464 QTSDLLALDPLSGVLTIRQQLDRESTPFLYLVVRATDQAVDL-----SQRRWGSVTARLFVKDENDNPPVFSSPSAISVM-EDQPVGFVILHVM-AHDADEGENGRVSYRIQSGNNA-----GRFSLSP-NTGSLSILKALDREEQEVFNLTIVAEDHGIPQLSTSQVLCVQVIDVNDEAPMFQQAEFGTHVMENKGPGTTVLKVTATDRDQGSNGHITY-----------------GGVTEDGFVINPLTGVITTTKELDAELQ---NHYVLTVYARDGGLPPNFAKAVVRVEVQDVNDNAPVFAKMW-----YGLE---VPENQPAVELCFVKATDPDSGPGGELE-------YKIAAGDPDGD----FQLHSRTG-----ALSTSHGLDREKKPKYTLEVVAVD--------RGSPALSATATVEVKVLDVNDNSPVFSKNSYTVEVLENAEEGYQ------VLQVSATDVDEGLNGKILYFLSQEADGAFAVDEDTGRITTAAPLDREKLASYNFRVFAVDLSPSVP---INSSAQVKVTILDVNDNAPFFIQDPLIIEVSSRRSQRVLATMKAEDKDFGANGSVFYRFATPVKGFSINSLTGEIQATEPLGSLTQAQRTLIVEAMDQGSPAQSAHGVVVVYVKEVEYN------GIRFSKNARDVSIQENASKGTAVAQAQAEYPDGTRQG-ISYSLFSGNKKHLFKISSSTGEIWVESSNGLDFEETPRLRLVVKA 2124

HSP 3 Score: 120.939 bits (302), Expect = 6.002e-27
Identity = 154/602 (25.58%), Postives = 252/602 (41.86%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL---QENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEE----TIMENIPVKEKVIEIVATDADSDENGKVNY-------RFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESS---TIPENSI-NNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVS--DKDLG--NRFYHKLMINPSQAFEL-----TESGELFLVLSFDR-EAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKISLP---SPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDN 2918
            G  ++  F+++ +TV DIND+ P FNQ     ++ E+     S L ++ A D D  +NG + Y++   Q + +  F    +  +   N P       LDYE+++ + + + A D+ +  +     + I V+D NDN P        E     I E     + V  I  TD D  E   VN        +FAL + +    +  Y           IYV Q LD +     + +D  V A D+G  P  + ++ TI++ DVND  P+            D+ +   TIPE     +++  V+  DKD GP G V        + L++G   K+  ++        D    II      D E        +I  D        + P+  T + +IVV   D NDN P +  + Y     EN P           LEVS  D+D G      + L +      +       ++G+L    + DR E +E   + + A+   G  +  V + V+++D ND  P F    Y  +   +S   T V  V A D D+   G I Y+ ++P   SP F++N  +G+I ++  L  +     ++ I A+D 
Sbjct:  214 GSPRRVGFMTLEVTVTDINDHAPVFNQSRYHAIISESLPQGSSILQVF-AADEDEGDNGLVLYEINRRQSDPERYFVIDLKSGVITLNRP-------LDYELKRVHELVVQARDNASQPEVTNAFVTIHVRDFNDNQPTMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKD----SIIYL----------IYVDQVLDRE---ERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLF-----------DQQAYRQTIPEVVYPGSFVLQVTARDKDQGPNGDVR-------YSLLKG---KKWFSI--------DPITGIITTATALDFESEPAPSVTVIATD------GGRPPLSSTAKVDIVV--QDVNDNAPVFSSNFYNVSVKENTP------AGTCFLEVSATDEDRGSFGTITYALTLKSGGTVQTPFTINKQTGQLCTASALDRDEGLEKYDLTVTAT-DGGGLSSAVGVRVKVMDINDNRPTFYPVLYTVSLSTHSAPGTSVVKVTANDPDAGENGRITYR-TVPGGSSPFFTLNKDTGVISLSRSLHSKANTVISMVITAVDG 745

HSP 4 Score: 117.087 bits (292), Expect = 8.860e-26
Identity = 179/764 (23.43%), Postives = 304/764 (39.79%), Query Frame = 3 
Query: 1077 NFKTSDYFLLHSSYLKVKR--SIDRE--EVCSKSSKNNDCILR----LILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQ-GINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDE-------KRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT-ESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT--VSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKF--PPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            +F T  Y L   S   V+   +I+++  ++C+ S+ + D  L      +         S + V + V DINDN P F  P +  V +   +A  + +    A DPD  ENG ITY+         S FF L      V  L +   L  +      M + AVD          ++ + +   + + P+FE+A Y  T+ E++ ++   + +V     +  +  + Y  +    +       YF + + SG     ++  L +D     +  D  + A   G+ P    + V I I D+ND  P    +   +              +   I  +   DKDSG  G +       +F+LI  G         + ++  S +     ++ I     +       ++I KD            QL++   +VV I  ++   P +    Y  +  EN P N          R   G    S     +  Y       +  F +  +SG LF+  S DREA +   + + A+       +T   ++ V + DEND +P  S +       EN  + T  G V ATD+D+ +   + Y++      F INS++G I     LDRE++  Y + ++  D         R+ T T  ++VLD ND+ P      P  +++  +    P G  V ++ A DPD  ENG+V Y +       FS++  +G L        +E         L A+D+G P   S+    QIR+
Sbjct:  589 SFGTITYALTLKSGGTVQTPFTINKQTGQLCTASALDRDEGLEKYDLTVTATDGGGLSSAVGVRVKVMDINDNRPTF-YPVLYTVSLSTHSAPGTSVVKVTANDPDAGENGRITYRTVPGGS---SPFFTLN-KDTGVISLSRS--LHSKANTVISMVITAVDGDGLTAPVNARVNVSIVGGSTSSPVFEQAQYFFTVSEDV-LRGTAVGVVRAATKTGVSKGIYYSISSGDPD------GYFTVDSTSGT----IRTALPLD-HETCSSLDLEIQA-RYGSPPSYGISRVHISISDINDNAPTFLPSSSES------LLLPEVTKMGTVIYRIQATDKDSGHNGQL-------SFDLISAGAAGSSGQRTFGIDRGSGE-----VRLIGSLSYDSVPRYDLQVIAKDG--------GAPQLSSTFTLVVHIQAQDAQGPNFDTLTYRVELRENAPLNTRFLQVRALNREASGNGGSSSSISSSISYRLRPDGDAAGFGIMPDSGWLFVRSSLDREAKDMYLLTVLATSRHSGTGRTGSATVRVTVTDENDNSPRLSQERVFLAVRENLVAGTGFGRVSATDRDAGLNARLTYRLLHADKHFQINSQTGEISTRLALDREQQSSYQLFVVVQDGGT----PPRSATGTAHISVLDENDHAPTFTHVRPDTERMFEVREGLPSGTMVGSVAAKDPDEGENGTVYYSLSGSRVERFSLNPNTGELKTASPLRWAER--AEYTFTLTAADHGTPGLSSTC---QIRI 1297

HSP 5 Score: 114.775 bits (286), Expect = 5.436e-25
Identity = 182/750 (24.27%), Postives = 295/750 (39.33%), Query Frame = 3 
Query: 1188 LRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYE-------AEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYI--------IKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYE---------------FKSYENRPRNDEKRVKLGI-LEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQ---TVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSP--LFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK---DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFEN 3314
            LRL++        SF++ ++ + D+NDN P+F         ++N  A + +   YE       AED D+ +NG +TY +Q +     S  F++     ++       ++D E+     + + A D G+P+  G   + + + D+NDN P       E  I EN  +  ++  +   D DS     ++Y   L        A   FGI      G + +   LD +       +   V A D   S   +   +TI + D+ND  P+ T        H     ++PE++   + +  V+  D+DSG  G V                       YRV   +Q +  YI        I +  EFD  E   +   I   D  +   ++   +Q        V I D NDN P + +S Y                F++++    ND  R   G    +++ + GN F  +  +   +       G L L    D E      + +   VSD    Q   +V+  + I D ND  PVFS   Y     E + S T +  + ATD DS     ++Y IS      LFSI+  +G +R+   LDRE +  + + I A D                     D+NDN+P   FP       I  N P    V  + A D D    G + Y +++    G + F I+  SG   +  K      ++ S + V VA D+G     S+ V+VQ+ +  E+
Sbjct: 2118 LRLVVKAETVSSTSFMAFNLVLQDVNDNLPRFQ--------LQNYVAFMKEAQGYEMPIIQVVAEDVDQGQNGQVTYSIQSSS---MSGLFKIDPVTGSI---TTTAIMDREIFTQTKLVVTATDRGSPRLAGLATLTVIIIDQNDNSPTIPLP-QEIRIPENTLIGTEITLVTGNDVDSSP--ALSYSLLL-----DPTALGKFGI--HRYTGGVSITGPLDFE---EKTWYTVTVQATD---SQHQTEANITIVVEDINDNAPLFT--------HDLYQISLPEHTPPGSAVITVTATDRDSGENGRVN----------------------YRVMSSTQ-EGFYIDPSNGTLFINHRAEFD-PERPSVNIVIEASDGGSPALSSLTTVQ--------VHISDINDNAPVFHQSEYRAMVSEDTFPGSTLLIFEAFD----NDLSRENCGFDFAIANGNEGNVFQIESSVRFLEGRGFQTVGTLLLAEGLDFETKSLYNLTVV--VSDRGVPQRSSSVAALITIGDVNDNPPVFSRPEYTVALSEGAVSGTEIIRLTATDPDSTPNAEVQYTISSGDEMNLFSIDQWTGALRLQRALDREHQSTHVVIIQATDGQGYFALVPVIVDVK------DVNDNHP--YFPVETLTATIQENLPANSPVTVLHAIDHDTGVFGQLKYYMMERSGSGRDSFVIEQNSGE--VRSKIPFDFEKINSFNFVAVAVDSG---NHSATVTVQVFVTGED 2778

HSP 6 Score: 107.842 bits (268), Expect = 6.659e-23
Identity = 186/759 (24.51%), Postives = 318/759 (41.90%), Query Frame = 3 
Query: 1110 SSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGR---SKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL-QENKDF-IFSQFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKA------LYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREEND----HIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTE--------SGELFLVLSFDREAMESNPVRIFAS-----VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFV-GHVEATDQDSDIYGPIEYKISLP--SPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSY-KIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLV--ASDNGIPTPKSSAV 3284
            S +L V+ S+DRE          D  L  +L   R   + +    +V +TV D NDN+P+ +Q  +   V EN  A  +      A D D   N  +TY+L   +K F I SQ   +        RL     LD E +  Y + ++  D G P ++ T    I V DEND+ P F         ++E  + E +P    V  + A D D  ENG V Y  +L  +  ++ + N       +G+    +K    +    R   + F ++A D+G     S   + I++I  +   P   V  +T N        +   +  + I +V  VDK      ++E  +T   + ++ G +   +  + R+        +Y+++   E D E+      H++     K  PN           +   ++ + + D ND+ P++ + P         P N E    +   +  D+D G+    +L  +    +  T         SG L +    DRE+     + + A+     +S  R+  +V+  + + DEND  PVFS  +   + +E+    FV  HV A D D    G + Y+I     +  FS++  +G + +   LDREE+E + + I+A D+       + + +  + V V+D+ND  P   F   +    +  N   G  V  + A D D   NG ++Y  + +DG   F I+  +G +    K   +E Q   +H VL   A D G+P   + AV
Sbjct: 1046 SGWLFVRSSLDREA--------KDMYLLTVLATSRHSGTGRTGSATVRVTVTDENDNSPRLSQERVFLAVRENLVAG-TGFGRVSATDRDAGLNARLTYRLLHADKHFQINSQTGEIST------RLA----LDREQQSSYQLFVVVQDGGTPPRSATGTAHISVLDENDHAPTFTHVRPDTERMFE--VREGLPSGTMVGSVAAKDPDEGENGTVYY--SLSGSRVERFSLN-----PNTGE----LKTASPLRWAERA-EYTFTLTAADHGTPGLSSTCQIRIQVISSSRSIPKPNVLSMTLN-------VVEGTAPGSIIGSVGQVDKPES--NVLEGQVT---YLVVDGTDRDGTFMVDRLRG-----DVYLVR---ELDYEKGSSYTLHVEVSDFSKAFPN-----------SYLVKLEINVQDSNDHAPQFSEDPVTIVI----PENKEPGASIYAFQAGDQD-GSGPNSELRYSIEHQWPQTSDLLALDPLSGVLTIRQQLDRESTPFLYLVVRATDQAVDLSQRRWG-SVTARLFVKDENDNPPVFSSPS-AISVMEDQPVGFVILHVMAHDADEGENGRVSYRIQSGNNAGRFSLSPNTGSLSILKALDREEQEVFNLTIVAEDHG----IPQLSTSQVLCVQVIDVNDEAP--MFQQAEFGTHVMENKGPGTTVLKVTATDRDQGSNGHITYGGVTEDG---FVINPLTG-VITTTKELDAELQ---NHYVLTVYARDGGLPPNFAKAV 1720

HSP 7 Score: 99.7525 bits (247), Expect = 1.696e-20
Identity = 154/625 (24.64%), Postives = 255/625 (40.80%), Query Frame = 3 
Query: 1491 LDYEVRKFYMMELLAVDDGNPQKTG-TLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINR-----FDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQ-RNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVK---LGILEVSDKDLGNRFYHKLMINPSQA-FELTESGELFLVL----SFDREAMESNPVRIFASVSDG-RYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKI-IKDGFNL---FSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            LD E R  Y    +AV       TG T+++ I V D ND+ P F K      I E+  V  +     ATDAD D+     Y  A+   N   +    F + ++    K+     LD+ ++  ++R     +  ++ A D G+  R    T+ + + D+ND  P+    +  +  H   S ++P+ S    I  V   D+D G  G+V                      LY +N +  D + Y + ++K      N  + +++       +Q R+N +  ++TN A + + + D NDN P        F S +  PR  E       +  + V+D D G      + +      F LT    +  ++      DRE  +S  +R+ A+ S         S  +Q+ D ND  P+F    YR    E  +  +FV  V A D+D    G + Y +      FSI+  +G+I   T LD E +   ++ ++A D               V     D+NDN P   F      V +  N P G     + A D D    G+++Y + +K G  +   F+I+ ++G L         E  L    L + A+D G     SSAV V++++
Sbjct:   90 LDREERDHY--SFIAV-----TMTGITIEVSITVNDINDHAPEFPKKKALLKIPEHTVVGTRFSLDPATDADKDQLTTQGY--AIKEGNVGHM----FKLESKRSANKVLY---LDLVVSGLLDREKRSSYSLVIEAFDGGSPRRVGFMTLEVTVTDINDHAPV----FNQSRYHAIISESLPQGS---SILQVFAADEDEGDNGLV----------------------LYEINRRQSDPERYFVIDLKSGVITLNRPLDYELKRVHELVVQARDNASQPEVTN-AFVTIHVRDFNDNQPTMT---IIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSIIYLIYVDQVLDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQTIPEVVYPGSFVLQVTARDKDQGPNGDVRYSLLKGKKWFSIDPITGIITTATALDFESEPAPSVTVIATDGGRPPLSSTAKVDIVVQ----DVNDNAP--VFSSNFYNVSVKENTPAGTCFLEVSATDEDRGSFGTITYALTLKSGGTVQTPFTINKQTGQLCTASALDRDEG-LEKYDLTVTATDGG---GLSSAVGVRVKV 655

HSP 8 Score: 93.2041 bits (230), Expect = 1.985e-18
Identity = 137/562 (24.38%), Postives = 231/562 (41.10%), Query Frame = 3 
Query: 1239 VSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFL-----LDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDAD-SDENGKVNYRFALPSNNQQQLACNYFGIVTE----SGK-----GKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITV-NYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDRE-ENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLG--NRFYHKLMINPSQA---FELTE-SGELFLVLSFDREAMES-NPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENS-FSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMI 2849
            ++I V DINDN P F   ++  + +       S +    A D D  ENG + Y++  +    F       I P N      LF+      D E R    + + A D G+P  +    +++ + D NDN P+F ++ Y   + E+      ++   A D D S EN    + FA+ + N+     N F I +      G+     G + + + LD +     + ++  V   D G   R S     I I DVND  P+ +   Y      G  S T         I  ++  D DS P           N E+   I+  + +NL+ +     DQ    ++  +  DRE ++ H+   +I +       + Q    L     ++V + D NDN P +          EN P N      + +L   D D G   +  + +M         F + + SGE+   + FD E + S N V +  +V  G ++ TV++ V +  E++  P+F+   + F   E +     +G V A D+D  + G + Y +   SP F +N  +G+I
Sbjct: 2340 ITIVVEDINDNAPLFTH-DLYQISLPEHTPPGSAVITVTATDRDSGENGRVNYRVMSSTQEGF------YIDPSN----GTLFINHRAEFDPE-RPSVNIVIEASDGGSPALSSLTTVQVHISDINDNAPVFHQSEYRAMVSEDTFPGSTLLIFEAFDNDLSREN--CGFDFAIANGNE----GNVFQIESSVRFLEGRGFQTVGTLLLAEGLDFETK---SLYNLTVVVSDRGVPQRSSSVAALITIGDVNDNPPVFSRPEYTVALSEGAVSGT--------EIIRLTATDPDSTP-----------NAEVQYTISSGDEMNLFSI-----DQWTGALRLQRALDREHQSTHV---VIIQ-----ATDGQGYFAL---VPVIVDVKDVNDNHPYFPVETLTATIQENLPANS----PVTVLHAIDHDTGVFGQLKYYMMERSGSGRDSFVIEQNSGEVRSKIPFDFEKINSFNFVAV--AVDSGNHSATVTVQVFVTGEDEYDPLFTSTDFAFEVPEGAKKGQSIGQVLARDEDGGVDGIVLYSLLPSSPYFDVNKTTGVI 2839

HSP 9 Score: 77.411 bits (189), Expect = 1.163e-13
Identity = 167/807 (20.69%), Postives = 316/807 (39.16%), Query Frame = 3 
Query:  978 FVTTEELHPNSLIGDLKPYLSSEMLQTLRLSNMNFKTSDYFLLHSSYLKVKRSIDRE-EVCSKSSKNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFS--QFFRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADS--------DENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACD-NGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSI-NNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLK----SPYEFKSYENRPRNDEKRVKLGILEVSDKDLG--NRFYHKLMINPSQAFELT-ESGELFLVLSFDREAMESNPVRIFASVSDGR--YNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQ-DSDIY-GPIEYKISLPS---PLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKE-NGSVSYKI---IKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRL 3302
            F  +E++   + +G ++    + + + +  S  +     YF + S+   ++ ++  + E CS         L +   YG         V I+++DINDN P F     E +++       + +Y  +A D D   NG +++ L        S  + F +      V RL+    L Y+    Y ++++A D G PQ + T  + + +Q ++   P F+   Y   + EN P+  + +++ A + ++          +  ++YR   P  +        FGI+ +S  G ++V+  LD +     + +   V A   +  + R    TV + + D ND  P ++   +           + EN +       VS  D+D+G    +   LT   + L+    DK     +++N ++ +     I      DRE+    +  ++ +D          P   T  A I VL  DEND+ P +      +   F+  E  P        +G +   D D G     Y+ L  +  + F L   +GEL       R A  +       +   G    + T  I +Q++  +   P  ++ +   N VE +   + +G V   D+ +S++  G + Y +   +     F ++   G + +  +LD E+   Y + +   D +                   D ND+ P+    P    +VI  N   G  ++  +A D D    N  + Y I        +L ++D  SG L   ++  L        +LV+ A+D  +   +    SV  RL
Sbjct:  777 FTVSEDVLRGTAVGVVRAATKTGVSKGIYYSISSGDPDGYFTVDSTSGTIRTALPLDHETCSS------LDLEIQARYGSPPSYGISRVHISISDINDNAPTFLPSSSESLLLPEVTKMGTVIYRIQATDKDSGHNGQLSFDLISAGAAGSSGQRTFGIDRGSGEV-RLIG--SLSYDSVPRYDLQVIAKDGGAPQLSSTFTLVVHIQAQDAQGPNFDTLTYRVELRENAPLNTRFLQVRALNREASGNGGSSSSISSSISYRLR-PDGD-----AAGFGIMPDS--GWLFVRSSLDREAK---DMYLLTVLATSRHSGTGRTGSATVRVTVTDENDNSPRLSQERVF--------LAVRENLVAGTGFGRVSATDRDAG----LNARLT---YRLLHA--DKH----FQINSQTGE-----ISTRLALDREQQSSYQLFVVVQD------GGTPPRSATGTAHISVL--DENDHAPTFTHVRPDTERMFEVREGLPSG----TMVGSVAAKDPDEGENGTVYYSLSGSRVERFSLNPNTGELKTASPL-RWAERAEYTFTLTAADHGTPGLSSTCQIRIQVISSSRSIPKPNVLSMTLNVVEGTAPGSIIGSVGQVDKPESNVLEGQVTYLVVDGTDRDGTFMVDRLRGDVYLVRELDYEKGSSYTLHVEVSDFSKAFPNSYLVKLEINVQ---DSNDHAPQFSEDP--VTIVIPENKEPGASIYAFQAGDQDGSGPNSELRYSIEHQWPQTSDLLALDPLSGVL--TIRQQLDRESTPFLYLVVRATDQAVDLSQRRWGSVTARL 1517

HSP 10 Score: 77.0258 bits (188), Expect = 1.575e-13
Identity = 77/302 (25.50%), Postives = 129/302 (42.72%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKLQENKD---FIFSQF---FRLQISPDNVPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENS-INNYIAAVSVVDKDSGPGGIV 2093
            G  ++ S ++  IT+ D+NDN P F++PE    + E A +  +++    A DPD   N  + Y +    +   F   Q+    RLQ +            LD E +  +++ + A D         + + + V+D NDN P F       TI EN+P    V  + A D D+   G++ Y     S + +         V E   G++  K   D +   +IN F+F+  A D+GN    +  TV + +   +++ P+ T          D +  +PE +     I  V   D+D G  GIV
Sbjct: 2552 GVPQRSSSVAALITIGDVNDNPPVFSRPEYTVALSEGAVSG-TEIIRLTATDPDSTPNAEVQYTISSGDEMNLFSIDQWTGALRLQRA------------LDREHQSTHVVIIQATD--GQGYFALVPVIVDVKDVNDNHPYFPVETLTATIQENLPANSPVTVLHAIDHDTGVFGQLKYYMMERSGSGRD------SFVIEQNSGEVRSKIPFDFE---KINSFNFVAVAVDSGN--HSATVTVQVFVTGEDEYDPLFTST--------DFAFEVPEGAKKGQSIGQVLARDEDGGVDGIV 2819

HSP 11 Score: 68.1662 bits (165), Expect = 7.549e-11
Identity = 78/281 (27.76%), Postives = 125/281 (44.48%), Query Frame = 3 
Query: 2535 SGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSF-STFVGHVEATDQDSDIYGPIEYKISL-PSPL--FSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYPLDHQ 3362
            +G +      DRE      + + A+     R     ++ V I+D+ND +P   L        EN+   T +  V   D DS     + Y + L P+ L  F I+  +G + +T  LD EEK +Y + + A D+ ++ E               D+NDN P       Q  + +  + P G  V T+ A D D  ENG V+Y+++      F ID  +G LFI  +    + +  S ++V+ ASD G P   SS  +VQ+ +        S+ N + P+ HQ
Sbjct: 2203 TGSITTTAIMDREIFTQTKLVVTATDRGSPRLAGLATLTVIIIDQNDNSPTIPL-PQEIRIPENTLIGTEITLVTGNDVDSSP--ALSYSLLLDPTALGKFGIHRYTGGVSITGPLDFEEKTWYTVTVQATDSQHQTEANITIVVE-------DINDNAPLFTHDLYQ--ISLPEHTPPGSAVITVTATDRDSGENGRVNYRVMSSTQEGFYIDPSNGTLFINHRAEF-DPERPSVNIVIEASDGGSPA-LSSLTTVQVHI--------SDINDNAPVFHQ 2461

HSP 12 Score: 66.6254 bits (161), Expect = 1.890e-10
Identity = 113/429 (26.34%), Postives = 178/429 (41.49%), Query Frame = 3 
Query: 2121 ELIQGINDKESLNLYRVNDKSQ---------DQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKD-LGNRFYHKLMINPSQAFELTESGE------LFLVLS--FDREAMESNPVRIFASVSDG---RYNQTVSINVQILDENDLAPVFSLDTYRFNCVEN-SFSTFVGHVEATDQDSDIYGPIEYKI----SLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYP--KIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIV-VKHSLSENQLTSSHLVLVASDNGIPTPKS-SAVSVQIRLPFENP 3317
            ++  G+   E+  LY ++D            D+   II   +  DREE DH  F  +      +              E+ + ++D ND+ PE+ K     K  E+       R  L     +DKD L  + Y     N    F+L           L LV+S   DRE   S  + I A   DG   R    +++ V + D ND APVF+   Y     E+    + +  V A D+D    G + Y+I    S P   F I+ KSG+I +   LD E K  + + + A DNA++ E      T  V     D NDN P   I F        I      G  V  +   DPD  E  +V+   ++ G   F++ +K   ++++ V   L   +  S  L ++A+D+G P  ++ S+ ++Q+    +NP
Sbjct:   47 DISAGLPPGETARLYFISDHEGTGVGSDLDIDETTGIITTKRRLDREERDHYSFIAVTMTGITI--------------EVSITVNDINDHAPEFPKKKALLKIPEHTVVG--TRFSLDPATDADKDQLTTQGYAIKEGNVGHMFKLESKRSANKVLYLDLVVSGLLDREKRSSYSLVIEA--FDGGSPRRVGFMTLEVTVTDINDHAPVFNQSRYHAIISESLPQGSSILQVFAADEDEGDNGLVLYEINRRQSDPERYFVIDLKSGVITLNRPLDYELKRVHELVVQARDNASQPEVTNAFVTIHVR----DFNDNQPTMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVS-LEGGDGKFALTTKDSIIYLIYVDQVLDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNP 452
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079])

HSP 1 Score: 197.978 bits (502), Expect = 3.288e-51
Identity = 226/813 (27.80%), Postives = 341/813 (41.94%), Query Frame = 3 
Query:  954 GFGCKNVHFVTTEELHPNSLIGDLKP---YLSSEMLQTLRLS----NMNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILRL---ILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA-NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLL---DYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFK-SYENRPRNDEKRVKLGILEV--SDKDLGNR---FYHKLMINPSQAFELTE----SGELFLVLSFDREAMESNPVRIFAS-VSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQI 3296
            G    ++ +   EE  PN+LIG L        S  L  L +      ++ KT D F         +  IDRE +  C    K   C L     +    ++  P  I   I V DINDNTP+F    +   V EN     L  + L  A D D + NG   Y L    D   +  F LQ++ D   +L QL +L   D E++  Y + + AVD GNPQ+     +++ V D NDN P FE   YE  + EN PV   V+++ A D+D   NG++ Y      +   +L      +  +   G IYVK  LD +    IN   F V A D G  P+ S+T VTI + D ND  P + +  I    H +  + I E+  +   +A V V DKD G   +V C +       ++  +D  S N          ++ Y ++     D E     + +I+  D  NP L   N   +Q+T          D NDN P +  + +E   + EN+P          IL+V  +D D G     FY+  ++  S    L E    +GE+      DRE  E    R+ A+      +  T ++ +++LD ND  P F L  Y F+ +EN    + VG V   D D      +   +      F + + +G I  +   DRE++  Y  ++ A+D         R+    V++ VLD NDN P +  P       +         V  +EA D D   N  + + I     + LF I   SG + +  + +     L    LV+  SD G P P+ +   V I
Sbjct:   18 GPAKGSILYRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGAPYLRVDGKTGDIF-------TTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPL--ATDRDSERNGVADYALTAGPDA--ATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKL------LRIDRTTGIIYVKGPLDRE---EINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDN----------KRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVT----------DVNDNSPVFSPTIFEVDFAEENQPGET-------ILDVTATDADSGTNAELFYN--IVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGE----PPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGL--HRLVVRVSDRGKP-PRHATALVHI 774
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079])

HSP 1 Score: 198.749 bits (504), Expect = 5.066e-51
Identity = 223/811 (27.50%), Postives = 338/811 (41.68%), Query Frame = 3 
Query:  954 GFGCKNVHFVTTEELHPNSLIGDLKP---YLSSEMLQTLRLS----NMNFKTSDYFLLHSSYLKVKRSIDREEV--CSKSSKNNDCILRL---ILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA-NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLL---DYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKD--NPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFK-SYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMIN------PSQAFEL-TESGELFLVLSFDREAMESNPVRIFASVSDGR-YNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFS-TFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDG-FNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQI 3296
            G    ++ +   EE  PN+LIG L        S  L  L +      ++ KT D F         +  IDRE +  C    K   C L     +    ++  P  I   I V DINDNTP+F    +   V EN     L  + L  A D D + NG   Y L    D   +  F LQ++ D   +L QL +L   D E++  Y + + AVD GNPQ+     +++ V D NDN P FE   YE  + EN PV   V+++ A D+D   NG++ Y      +   +L      +  +   G IYVK  LD +    IN   F V A D G  P+ S+T VTI + D ND  P + +  I    H +  + I E+  +   +A V V DKD G   +V C +       ++  +D  S N          ++ Y ++     D E     + +I+  D  NP L   N   +Q+T          D NDN P +  + +E   + EN+P          IL+V+  D  +    +L  N          FE+   +GE+      DRE  E    R+ A+      +  T ++ +++LD ND  P F L  Y F+ +EN    + VG V   D D      +   +      F + + +G I  +   DRE++  Y  ++ A+D         R+    V++ VLD NDN P +  P       +         V  +EA D D   N  + + I     + LF I   SG + +  + +     L    LV+  SD G P P+ +   V I
Sbjct:   95 GPAKGSILYRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGAPYLRVDGKTGDIF-------TTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPL--ATDRDSERNGVADYALTAGPDA--ATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKL------LRIDRTTGIIYVKGPLDRE---EINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDN----------KRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVT----------DVNDNSPVFSPTIFEVDFAEENQPGET-------ILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGE----PPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGL--HRLVVRVSDRGKP-PRHATALVHI 851
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238])

HSP 1 Score: 197.208 bits (500), Expect = 7.191e-51
Identity = 230/796 (28.89%), Postives = 359/796 (45.10%), Query Frame = 3 
Query:  990 EELHPNSLIGDLKPYLSSEMLQTLRLSNMNF------KTSDYFLLH-----SSYLKVKRSIDREEVCSKSS-KNNDCILRLILVYGRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENA--NARLSDLYLYEAEDPDRQENGTITYKLQENKDFIFSQFFRLQI--SPDN--VPRLMQLFLLDYEVRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFA--LPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITN--NGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDN--PNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQA-FEL-TESGELFLVLSFDREAMESNPVRIFASVSDGRYNQT------VSINVQILDENDLAPVFSLDTYRFNCVEN--SFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQ---KLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIK-DGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIP 3263
            EEL  N LIG++   L+         ++ N       K  D  L+               IDRE++C  SS ++ +C   + +V   +     I + I V D NDN P F  P I   + EN   N+R +   +  A DPD   N    Y+L   +       F L I  +P+    P+L+    LD E +  Y+M++   D G+PQK+ T  +++ V D NDN P+F +   E  I EN P+   V+++ ATDAD   N +++Y F   +    ++  A N       S  G I V++ LD + T  I++   +  A D  +SP  +R TV I + DVND  P I + YI +  NG    S   P   IN  IA ++V DKD+   G V C++       ++ + D +                Y+++     D E      FKI+  D+  P+L +           A + V ++DENDNPP + +   E    EN  R+    + L  L  +D+D G        + P+ + F+L  ++G L     FDRE  +    R   +V+  R N T       ++ V +LDEND  P F+ + ++F   EN   +ST VG +  TD D+     I   I   +  F ++  SG+I+     DRE++  Y   + AID+         +    V++ V+D+NDN P + +PP     KLV + S+ P G  V  + A D D   N  + Y I+  +   LF ID  +GN  I ++   +   +    LV+  SD G P
Sbjct:   32 EELQENVLIGNIPKDLNISHTSAATGASANLVYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSFEDAECSFEIEVVVLPNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFA---IPSATDPDTGPNSVHKYELINGQ-----SAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALN-------STSGLITVQRPLDREET-AIHKLSVL--ASDGSSSP--ARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDP---INTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQ----------------YLLETSALLDYEGTKEYNFKIVASDSGKPSLNQT----------ALVRVRLEDENDNPPIFTQPVIELAVMENNKRD----LFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQD----RFLFTVT-ARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYST-VGVITVTDSDAGENAAISLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGR----PPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPL-SSIP-GSVVAEVFAVDSDTGMNAELKYTIVSGNNKGLFRIDPVTGN--ITLEEKPAPTDIGLHRLVVNISDLGYP 760
[Close]
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000072088.1 (SMESG000072088.1)

HSP 1 Score: 1507.66 bits (3902), Expect = 0.000e+0
Identity = 802/802 (100.00%), Postives = 802/802 (100.00%), Query Frame = 3 
Query: 1518 MMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYPLDHQPRIEKSNKKXXXXXXXXXXXXXXXXXXXXXXXXYHTKMPTSRPAVKHVDKFQNVQTKPRNFTPVNGQNLSQPIDDNMLGTTKIFHQPSTLFRNEPLKDNHFEKLHDPINIDEYQQLMTTPTLLRIWHNNLNQYNELLPSDNTSHFXXXXXXXXXXXXXXFGESLRDLQKTISTEQSLSSNYLQSSFV 3923
            MMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANEREGGRRTGTTTVSVTVLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYPLDHQPRIEKSNKKTMIVIIVVALALIVTIIMTIIIIIYHTKMPTSRPAVKHVDKFQNVQTKPRNFTPVNGQNLSQPIDDNMLGTTKIFHQPSTLFRNEPLKDNHFEKLHDPINIDEYQQLMTTPTLLRIWHNNLNQYNELLPSDNTSHFQSSSSVPSPIPVQVFGESLRDLQKTISTEQSLSSNYLQSSFV
Sbjct:    1 MMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANEREGGRRTGTTTVSVTVLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYPLDHQPRIEKSNKKTMIVIIVVALALIVTIIMTIIIIIYHTKMPTSRPAVKHVDKFQNVQTKPRNFTPVNGQNLSQPIDDNMLGTTKIFHQPSTLFRNEPLKDNHFEKLHDPINIDEYQQLMTTPTLLRIWHNNLNQYNELLPSDNTSHFQSSSSVPSPIPVQVFGESLRDLQKTISTEQSLSSNYLQSSFV 802

HSP 2 Score: 59.3066 bits (142), Expect = 1.843e-8
Identity = 146/615 (23.74%), Postives = 237/615 (38.54%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL---QENKDFIFSQFFRLQISPDNVPRLMQLFLLDYE----VRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFE--------KALYEETIMENIPVKEKVIEIVATDADSDENGKV-----NYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPR--------CSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLT-NQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDK--DLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFA-----SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGH----VEATDQDSDIYGPIEYKISLPS-PLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNAN 2924
            G  +K   + + I V D NDN P F +   E  ++EN   +   + +  A D D  ENG + Y+      N+  +   +F + ++     ++     LD +    + +F  M + A D+GN  +     + IR+ D ND  P+                TI EN  +   +  +   D DS   G V     N  F L      + + N + +  +S   +IY+ + +        +   F +   DN N  R         +   + + I D ND  P     Y+ +          P N      +  + V DKD G     +  +  +Q FEL       ES  L+ V                 FDRE  +    +I    +    R NQ          I V I DEND  P +    Y F   EN          +G +E +D+  D+     +K+ + PS  F + ++SG + +    DRE  E   ++I A         GR   T +++V +LD ND  P       +   V +S +  +GH    +EA D D    G + YKI      LFSI+SKSG + +  K    E +  +  ++ + + N
Sbjct:   10 GNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIV-ATDADSDENGKVNYRFALPSNNQQQLACNYFGI-VTESGKGKIYVKQKLDIDLTPRINRFDFM-VSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPP----EYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT------ESGELFLV---------------LSFDREAMESNPVRIFASVSDG--RYNQT-------VSINVQILDENDLAPVFSLDTYRFNCVEN-----SFSTFVGHVEATDQDSDIYGPIEYKISL-PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANEREGGRRTGTTTVSVTVLDLNDNYPKIKFPPPQKLVVIDS-NWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDN 579
[Close]
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000072088.1 (SMESG000072088.1)

HSP 1 Score: 1505.35 bits (3896), Expect = 0.000e+0
Identity = 801/801 (100.00%), Postives = 801/801 (100.00%), Query Frame = 3 
Query: 1521 MELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANXXXXXXXXXXXXXXXXXLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYPLDHQPRIEKSNKKXXXXXXXXXXXXXXXXXXXXXXXXYHTKMPTSRPAVKHVDKFQNVQTKPRNFTPVNGQNLSQPIDDNMLGTTKIFHQPSTLFRNEPLKDNHFEKLHDPINIDEYQQLMTTPTLLRIWHNNLNQYNELLPSDNTSHFXXXXXXXXXXXXXXFGESLRDLQKTISTEQSLSSNYLQSSFV 3923
            MELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANEREGGRRTGTTTVSVTVLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYPLDHQPRIEKSNKKTMIVIIVVALALIVTIIMTIIIIIYHTKMPTSRPAVKHVDKFQNVQTKPRNFTPVNGQNLSQPIDDNMLGTTKIFHQPSTLFRNEPLKDNHFEKLHDPINIDEYQQLMTTPTLLRIWHNNLNQYNELLPSDNTSHFQSSSSVPSPIPVQVFGESLRDLQKTISTEQSLSSNYLQSSFV
Sbjct:    1 MELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSFDREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANEREGGRRTGTTTVSVTVLDLNDNYPKIKFPPPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFENPSEQSENNPDYPLDHQPRIEKSNKKTMIVIIVVALALIVTIIMTIIIIIYHTKMPTSRPAVKHVDKFQNVQTKPRNFTPVNGQNLSQPIDDNMLGTTKIFHQPSTLFRNEPLKDNHFEKLHDPINIDEYQQLMTTPTLLRIWHNNLNQYNELLPSDNTSHFQSSSSVPSPIPVQVFGESLRDLQKTISTEQSLSSNYLQSSFV 801

HSP 2 Score: 58.9214 bits (141), Expect = 2.297e-8
Identity = 146/615 (23.74%), Postives = 237/615 (38.54%), Query Frame = 3 
Query: 1209 GRSKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAEDPDRQENGTITYKL---QENKDFIFSQFFRLQISPDNVPRLMQLFLLDYE----VRKFYMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFE--------KALYEETIMENIPVKEKVIEIVATDADSDENGKV-----NYRFALPSNNQQQLACNYFGIVTESGKGKIYVKQKLDIDLTPRINRFDFMVSACDNGNSPR--------CSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPENSINNY-IAAVSVVDKDSGPGGIVECYLT-NQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENRPRNDEKRVKLGILEVSDK--DLGNRFYHKLMINPSQAFEL-TESGELFLVLSFDREAMESNPVRIFA-----SVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNCVENSFSTFVGH----VEATDQDSDIYGPIEYKISLPS-PLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNAN 2924
            G  +K   + + I V D NDN P F +   E  ++EN   +   + +  A D D  ENG + Y+      N+  +   +F + ++     ++     LD +    + +F  M + A D+GN  +     + IR+ D ND  P+                TI EN  +   +  +   D DS   G V     N  F L      + + N + +  +S   +IY+ + +        +   F +   DN N  R         +   + + I D ND  P     Y+ +          P N      +  + V DKD G     +  +  +Q FEL       ES  L+ V                 FDRE  +    +I    +    R NQ          I V I DEND  P +    Y F   EN          +G +E +D+  D+     +K+ + PS  F + ++SG + +    DRE  E   ++I A         GR   T +++V +LD ND  P       +   V +S +  +GH    +EA D D    G + YKI      LFSI+SKSG + +  K    E +  +  ++ + + N
Sbjct:    9 GNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPVKEKVIEIV-ATDADSDENGKVNYRFALPSNNQQQLACNYFGI-VTESGKGKIYVKQKLDIDLTPRINRFDFM-VSACDNGNSPRCSRTTVTIRIIDVNDFRPIITVNYITNNGHGDESSTIPEN-SINNYIAAVSVVDKDSGPGGIVECYLTNQNFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKIICKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPP----EYLKSPYEFKSYENRPRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELT------ESGELFLV---------------LSFDREAMESNPVRIFASVSDG--RYNQT-------VSINVQILDENDLAPVFSLDTYRFNCVEN-----SFSTFVGHVEATDQDSDIYGPIEYKISL-PSPLFSINSKSGMIRVTTKLDREEKEFYAIQILAIDNANEREGGRRTGTTTVSVTVLDLNDNYPKIKFPPPQKLVVIDS-NWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDSKSGNLFIVVKHSLSENQLTSSHLVLVASDN 578
[Close]
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000072099.1 (SMESG000072099.1)

HSP 1 Score: 495.352 bits (1274), Expect = 3.914e-162
Identity = 296/297 (99.66%), Postives = 297/297 (100.00%), Query Frame = 3 
Query:    6 MILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTKDQIEDISXXXXXXXXXXXXXINQPYKRNEXXXXXXXXXXXXXXXXXXXXXXXXEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADSQNEEEDISDFNDGPKXXXXXXXXXXXDVFEKYERSSVPKKTKRKFVIGGVNAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEELFNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPE 896
            +ILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTKDQIEDISENNEEKDERELEDINQPYKRNEDDDDKGKSDDNKDNDKRKRGDTDKEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADSQNEEEDISDFNDGPKESGSEEEEFFGDVFEKYERSSVPKKTKRKFVIGGVNAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEELFNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPE
Sbjct:   49 VILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTKDQIEDISENNEEKDERELEDINQPYKRNEDDDDKGKSDDNKDNDKRKRGDTDKEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADSQNEEEDISDFNDGPKESGSEEEEFFGDVFEKYERSSVPKKTKRKFVIGGVNAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEELFNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPE 345
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BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000072099.1 (SMESG000072099.1)

HSP 1 Score: 495.352 bits (1274), Expect = 4.331e-162
Identity = 296/297 (99.66%), Postives = 297/297 (100.00%), Query Frame = 3 
Query:    6 MILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTKDQIEDISXXXXXXXXXXXXXINQPYKRNEXXXXXXXXXXXXXXXXXXXXXXXXEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADSQNEEEDISDFNDGPKXXXXXXXXXXXDVFEKYERSSVPKKTKRKFVIGGVNAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEELFNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPE 896
            +ILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTKDQIEDISENNEEKDERELEDINQPYKRNEDDDDKGKSDDNKDNDKRKRGDTDKEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADSQNEEEDISDFNDGPKESGSEEEEFFGDVFEKYERSSVPKKTKRKFVIGGVNAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEELFNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPE
Sbjct:   47 VILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTKDQIEDISENNEEKDERELEDINQPYKRNEDDDDKGKSDDNKDNDKRKRGDTDKEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADSQNEEEDISDFNDGPKESGSEEEEFFGDVFEKYERSSVPKKTKRKFVIGGVNAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEELFNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPE 343
[Close]
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000072099.1 (SMESG000072099.1)

HSP 1 Score: 493.426 bits (1269), Expect = 4.389e-161
Identity = 296/297 (99.66%), Postives = 297/297 (100.00%), Query Frame = 3 
Query:    6 MILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTKDQIEDISXXXXXXXXXXXXXINQPYKRNEXXXXXXXXXXXXXXXXXXXXXXXXEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADSQNEEEDISDFNDGPKXXXXXXXXXXXDVFEKYERSSVPKKTKRKFVIGGVNAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEELFNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPE 896
            +ILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTKDQIEDISENNEEKDERELEDINQPYKRNEDDDDKGKSDDNKDNDKRKRGDTDKEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADSQNEEEDISDFNDGPKESGSEEEEFFGDVFEKYERSSVPKKTKRKFVIGGVNAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEELFNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPE
Sbjct:   68 VILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTKDQIEDISENNEEKDERELEDINQPYKRNEDDDDKGKSDDNKDNDKRKRGDTDKEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADSQNEEEDISDFNDGPKESGSEEEEFFGDVFEKYERSSVPKKTKRKFVIGGVNAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEELFNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPE 364
The following BLAST results are available for this feature:
BLAST of Protocadherin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PCDH11Y3.020e-5728.62protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:... [more]
PCDH11Y3.374e-5728.62protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:... [more]
PCDH11Y3.374e-5728.62protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:... [more]
PCDH11Y4.292e-5728.62protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:... [more]
PCDH11Y5.947e-5728.62protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:... [more]
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BLAST of Protocadherin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
fmi-17.192e-4325.57FlaMIngo (Cadherin plus 7TM domain) homolog [Sour... [more]
fmi-11.911e-3326.21FlaMIngo (Cadherin plus 7TM domain) homolog [Sour... [more]
cdh-19.739e-2725.57CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4... [more]
hmr-19.648e-2424.70Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Pr... [more]
hmr-19.648e-2424.70Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Pr... [more]
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BLAST of Protocadherin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
stan1.833e-4125.80gene:FBgn0024836 transcript:FBtr0339463[more]
stan1.846e-4125.80gene:FBgn0024836 transcript:FBtr0303223[more]
stan1.846e-4125.80gene:FBgn0024836 transcript:FBtr0088214[more]
stan1.871e-4125.80gene:FBgn0024836 transcript:FBtr0330601[more]
stan1.942e-4125.80gene:FBgn0024836 transcript:FBtr0304900[more]
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BLAST of Protocadherin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh92.683e-5528.97protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1... [more]
pcdh92.683e-5528.97protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1... [more]
CT030123.12.911e-5526.22protocadherin 1b [Source:NCBI gene;Acc:572016][more]
pcdh92.956e-5528.90protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1... [more]
pcdh1a5.645e-5527.86protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-... [more]
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BLAST of Protocadherin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh171.915e-5427.72protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
pcdh174.640e-5428.14protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
pcdh177.395e-5428.14protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
pcdh178.129e-5428.01protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
ENSXETT00000047804.11.105e-5328.00protocadherin 11 X-linked [Source:NCBI gene;Acc:10... [more]
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BLAST of Protocadherin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Pcdh14.249e-5527.48protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692][more]
Pcdh14.249e-5527.48protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692][more]
Pcdh11x5.423e-5428.82protocadherin 11 X-linked [Source:MGI Symbol;Acc:M... [more]
Pcdh11x7.544e-5428.82protocadherin 11 X-linked [Source:MGI Symbol;Acc:M... [more]
Pcdh11x8.845e-5428.82protocadherin 11 X-linked [Source:MGI Symbol;Acc:M... [more]
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BLAST of Protocadherin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9BZA8|PC11Y_HUMAN2.856e-5628.62Protocadherin-11 Y-linked OS=Homo sapiens OX=9606 ... [more]
sp|Q71M42|PC11X_PANTR3.590e-5628.38Protocadherin-11 X-linked OS=Pan troglodytes OX=95... [more]
sp|Q6WYY1|PC11X_PANPA4.268e-5628.38Protocadherin-11 X-linked OS=Pan paniscus OX=9597 ... [more]
sp|Q6V0I7|FAT4_HUMAN1.074e-5531.48Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT... [more]
sp|Q6X862|PC11X_GORGO1.903e-5528.36Protocadherin-11 X-linked OS=Gorilla gorilla goril... [more]
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BLAST of Protocadherin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A158QGR42.280e-7529.63Uncharacterized protein OS=Rodentolepis nana OX=10... [more]
A0A158R6F04.904e-7528.03Uncharacterized protein OS=Taenia asiatica OX=6051... [more]
A0A4E0S1274.599e-7429.89Protocadherin-11 Y-linked OS=Fasciola hepatica OX=... [more]
A0A158REL52.378e-7229.92Uncharacterized protein OS=Hydatigena taeniaeformi... [more]
A0A267FFK43.449e-7129.08Uncharacterized protein OS=Macrostomum lignano OX=... [more]
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BLAST of Protocadherin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh1a2.049e-5427.33protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-... [more]
pcdh1a3.648e-5427.41protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-... [more]
pcdh1b1.448e-5326.84protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-... [more]
ENSAMXT00000050733.18.546e-5326.92pep primary_assembly:Astyanax_mexicanus-2.0:20:107... [more]
pcdh93.622e-5228.23protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1... [more]
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BLAST of Protocadherin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh114.550e-4827.63protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-... [more]
ENSPMAT00000008517.12.555e-4027.45pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 ... [more]
ENSPMAT00000006996.17.588e-3928.81pep scaffold:Pmarinus_7.0:GL476780:2096:143714:1 g... [more]
si:ch211-199f5.12.705e-3525.57protocadherin 8 [Source:HGNC Symbol;Acc:HGNC:8660][more]
ENSPMAT00000004042.14.363e-3426.21pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 g... [more]
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BLAST of Protocadherin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protocadherin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO482372.038e-4728.35Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO354124.081e-4529.00Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO461894.520e-4425.85Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO404702.142e-4227.00Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO348152.513e-3826.67Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Protocadherin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
FAT42.711e-5228.63FAT atypical cadherin 4 [Source:NCBI gene;Acc:1011... [more]
ENSORLT00000005325.21.593e-5129.25protocadherin-16 [Source:NCBI gene;Acc:101171352][more]
pcdh1a3.288e-5127.80protocadherin-1 [Source:NCBI gene;Acc:101157079][more]
pcdh1a5.066e-5127.50protocadherin-1 [Source:NCBI gene;Acc:101157079][more]
pcdh97.191e-5128.89protocadherin 9 [Source:NCBI gene;Acc:101156238][more]
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BLAST of Protocadherin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000072088.11.843e-8100.00SMESG000072088.1[more]
SMESG000072088.12.297e-8100.00SMESG000072088.1[more]
SMESG000072099.13.914e-16299.66SMESG000072099.1[more]
SMESG000072099.14.331e-16299.66SMESG000072099.1[more]
SMESG000072099.14.389e-16199.66SMESG000072099.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30032484 ID=SMED30032484|Name=Protocadherin|organism=Schmidtea mediterranea sexual|type=transcript|length=3998bp
ATTAAATGATATTAATATGTTGGTTAATTATCAGCTTAATAGAAGAAAGA
GTAATTGATACGAAGTACATAGGAATAAATAACATCCTTGAGGGACAGGA
CAGATATAATCAGGAAAAAAGAGAGAAATTATCAAATGAAATAAACAACA
CGAAAGACCAAATAGAAGACATTTCGGAAAATAATGAAGAAAAAGATGAA
AGAGAATTAGAAGATATCAATCAGCCATACAAAAGAAACGAGGATGATGA
TGATAAAGGTAAATCTGATGACAATAAAGACAATGACAAACGTAAACGAG
GTGACACCGACAAAGAATTTCAACAAACCGATGAATTATCAGAAGACGAT
TTCAATTTTCAAGATGACTACGATAAACGCAATTTTCTTGTCACTCGATC
AGCTGCCCCAAAGCAAGAGATGAAATTAAAGAATTTTGATTCCCCTGCTG
ATTCTCAAAACGAAGAAGAAGATATTTCTGATTTTAATGACGGTCCCAAA
GAATCTGGCAGTGAAGAAGAAGAATTTTTTGGAGATGTATTTGAAAAATA
TGAGCGATCTTCCGTACCCAAAAAGACAAAACGAAAATTTGTAATTGGAG
GTGTAAATGCTTATGTTGGGAAATATAGATGGGCAGCTTTTATGATTGGT
GAAATCGAACCTGACTGGCCTTTATTTTGTGGAGCTTCTATTATTAACTC
TTTTTGGCTTATTTCTGCAGCACATTGCTTTCTTTCATTTGAATATGAAG
AGTTGTTTAATTTAACTGATCCTAAAAAGTGGAATGTGCAAGCTGGTCAA
GTTTTCGTTACTATCCCCGAGGGTCAACGCCATTATTCAAACCCAAATGC
GTTGCAAATCAAAAAAATTGTTTTACATCCAAAATATAATCCAGAATTTT
TTGCGTAATTGAAAATGATTATTGTCTTTGTATTGATGGTTCTCAATATT
CGTGGTTTTGGGTGCAAAAACGTCCATTTTGTAACTACTGAAGAATTGCA
CCCAAATTCGCTAATTGGTGATCTCAAGCCTTACCTCAGTTCAGAAATGC
TCCAGACTCTGAGATTATCAAATATGAATTTTAAAACAAGTGACTACTTT
CTATTGCATTCATCATACTTAAAAGTCAAACGATCAATTGATCGAGAAGA
GGTCTGTTCAAAATCTTCAAAAAATAATGACTGTATCTTAAGACTGATAC
TCGTTTATGGAAGATCTAAGAAACCTTCCTTTATCTCTGTCTCAATCACC
GTGAATGACATTAATGATAACACTCCTAAATTCAATCAACCTGAAATTGA
GCATGTAGTTGTGGAAAATGCAAATGCTCGACTCAGTGACTTATATCTTT
ACGAAGCAGAAGATCCTGACCGACAAGAAAATGGAACGATTACATACAAG
TTACAAGAAAATAAAGATTTTATCTTTTCCCAATTTTTCAGGCTGCAGAT
ATCTCCCGATAACGTTCCTCGCCTAATGCAGTTATTCCTTCTGGACTATG
AAGTACGAAAATTCTACATGATGGAATTGCTGGCTGTTGATGATGGAAAC
CCACAGAAAACTGGAACTTTGAAAATAAAGATCCGAGTTCAAGATGAAAA
CGATAATCTGCCACTTTTTGAGAAAGCCCTTTATGAAGAAACAATAATGG
AAAATATCCCAGTTAAAGAAAAGGTCATCGAAATAGTAGCGACAGACGCT
GACAGTGACGAAAATGGAAAGGTAAACTACCGTTTTGCACTTCCGTCAAA
TAATCAACAACAATTAGCTTGTAATTACTTTGGTATTGTTACAGAGTCTG
GAAAAGGAAAGATTTACGTAAAACAAAAGCTTGACATTGACCTAACTCCC
CGGATAAATAGATTTGATTTTATGGTTTCAGCTTGCGATAACGGAAATTC
TCCGCGTTGTAGTCGAACAACAGTTACGATACGGATCATTGACGTCAACG
ATTTTAGACCAATTATTACTGTTAATTATATAACAAACAATGGCCATGGA
GATGAATCAAGCACAATTCCAGAAAATAGCATAAACAATTACATAGCCGC
CGTTTCTGTTGTTGACAAAGATTCGGGACCGGGTGGCATCGTAGAGTGCT
ATTTGACTAATCAGAACTTTGAATTAATCCAAGGAATCAACGATAAAGAG
TCACTGAATCTTTACCGAGTCAATGATAAAAGTCAAGATCAACAAATATA
CATCATAAAAAATATTAAAGAGTTCGATCGAGAAGAAAATGACCATATAA
AATTCAAAATAATCTGTAAAGATAATCCCAATCTTCAAAGAAACAATCAG
AATCCCATTCAATTAACGAATGAAGCAGAAATCGTTGTTTTAATAGACGA
TGAAAATGACAATCCACCGGAATATTTAAAATCACCGTATGAATTTAAAT
CCTATGAAAACCGACCGAGAAACGACGAGAAAAGAGTGAAATTAGGGATT
TTGGAAGTTTCGGATAAAGATCTTGGTAATAGATTTTATCATAAGCTTAT
GATAAATCCTTCTCAAGCATTTGAATTGACAGAATCCGGTGAATTATTTC
TCGTTCTCTCGTTTGATCGCGAAGCAATGGAATCGAATCCCGTGAGGATC
TTTGCATCGGTTTCAGATGGTAGATATAACCAAACTGTCTCGATCAATGT
CCAAATACTGGACGAGAACGATTTGGCTCCCGTTTTCTCGTTGGATACAT
ATCGGTTTAATTGTGTTGAGAATTCTTTTTCCACATTTGTCGGTCACGTA
GAGGCCACAGATCAGGACTCGGACATTTACGGTCCTATTGAATACAAAAT
ATCTTTACCTTCGCCTTTGTTTTCGATCAATTCAAAATCTGGAATGATTC
GAGTAACAACCAAATTAGACCGGGAAGAAAAGGAATTTTATGCCATACAG
ATTTTAGCAATAGACAACGCCAATGAGCGAGAAGGGGGCAGACGAACTGG
AACTACAACAGTAAGTGTCACAGTTCTGGATTTAAATGATAATTATCCTA
AAATAAAATTCCCCCCACCTCAAAAGTTAGTTGTAATTGATTCAAATTGG
CCCATAGGTCATAAGGTTTTTACCATGGAAGCTTTTGATCCAGATTTAAA
AGAAAATGGCTCAGTTAGTTACAAAATCATAAAAGACGGATTCAATTTAT
TCAGCATTGACTCGAAATCTGGAAATTTATTTATTGTTGTGAAACATTCT
CTATCGGAAAACCAACTGACCTCTTCCCATTTGGTATTGGTTGCGAGTGA
CAATGGAATTCCGACTCCGAAATCCTCGGCAGTCAGTGTACAAATCCGGC
TACCTTTTGAAAATCCATCTGAACAATCTGAAAATAACCCTGACTACCCA
TTGGACCATCAACCGAGAATAGAAAAGTCTAATAAAAAAACAATGATTGT
TATAATTGTGGTGGCATTGGCATTAATTGTTACAATAATTATGACAATCA
TAATCATTATTTATCACACAAAAATGCCCACTTCAAGACCAGCTGTAAAA
CATGTTGACAAATTTCAAAATGTGCAAACTAAACCCCGCAATTTTACTCC
TGTCAACGGACAGAATTTATCTCAGCCCATAGACGATAATATGCTTGGGA
CAACAAAAATATTTCATCAACCTTCAACATTATTTCGGAATGAACCTTTG
AAAGACAATCACTTTGAAAAGCTTCATGACCCTATAAATATTGACGAATA
TCAACAGCTCATGACAACGCCGACTTTGTTGCGTATATGGCATAATAATC
TCAACCAATACAATGAACTTTTACCTTCAGATAACACATCTCATTTTCAG
TCATCATCTTCAGTTCCAAGTCCAATACCAGTTCAGGTCTTTGGAGAATC
TCTAAGAGATCTTCAGAAAACCATTTCCACAGAACAAAGTTTATCCAGCA
ATTATTTACAGTCAAGCTTTGTTTGAATTGTTTTTCGAATTTTGATTCAA
TGACAACAGTTTTGTACATAAACCTTTGTTTATAATTTCAAACAATTC
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protein sequence of SMED30032484-orf-1

>SMED30032484-orf-1 ID=SMED30032484-orf-1|Name=SMED30032484-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=301bp
MILICWLIISLIEERVIDTKYIGINNILEGQDRYNQEKREKLSNEINNTK
DQIEDISENNEEKDERELEDINQPYKRNEDDDDKGKSDDNKDNDKRKRGD
TDKEFQQTDELSEDDFNFQDDYDKRNFLVTRSAAPKQEMKLKNFDSPADS
QNEEEDISDFNDGPKESGSEEEEFFGDVFEKYERSSVPKKTKRKFVIGGV
NAYVGKYRWAAFMIGEIEPDWPLFCGASIINSFWLISAAHCFLSFEYEEL
FNLTDPKKWNVQAGQVFVTIPEGQRHYSNPNALQIKKIVLHPKYNPEFFA
*
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protein sequence of SMED30032484-orf-2

>SMED30032484-orf-2 ID=SMED30032484-orf-2|Name=SMED30032484-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1004bp
MIIVFVLMVLNIRGFGCKNVHFVTTEELHPNSLIGDLKPYLSSEMLQTLR
LSNMNFKTSDYFLLHSSYLKVKRSIDREEVCSKSSKNNDCILRLILVYGR
SKKPSFISVSITVNDINDNTPKFNQPEIEHVVVENANARLSDLYLYEAED
PDRQENGTITYKLQENKDFIFSQFFRLQISPDNVPRLMQLFLLDYEVRKF
YMMELLAVDDGNPQKTGTLKIKIRVQDENDNLPLFEKALYEETIMENIPV
KEKVIEIVATDADSDENGKVNYRFALPSNNQQQLACNYFGIVTESGKGKI
YVKQKLDIDLTPRINRFDFMVSACDNGNSPRCSRTTVTIRIIDVNDFRPI
ITVNYITNNGHGDESSTIPENSINNYIAAVSVVDKDSGPGGIVECYLTNQ
NFELIQGINDKESLNLYRVNDKSQDQQIYIIKNIKEFDREENDHIKFKII
CKDNPNLQRNNQNPIQLTNEAEIVVLIDDENDNPPEYLKSPYEFKSYENR
PRNDEKRVKLGILEVSDKDLGNRFYHKLMINPSQAFELTESGELFLVLSF
DREAMESNPVRIFASVSDGRYNQTVSINVQILDENDLAPVFSLDTYRFNC
VENSFSTFVGHVEATDQDSDIYGPIEYKISLPSPLFSINSKSGMIRVTTK
LDREEKEFYAIQILAIDNANEREGGRRTGTTTVSVTVLDLNDNYPKIKFP
PPQKLVVIDSNWPIGHKVFTMEAFDPDLKENGSVSYKIIKDGFNLFSIDS
KSGNLFIVVKHSLSENQLTSSHLVLVASDNGIPTPKSSAVSVQIRLPFEN
PSEQSENNPDYPLDHQPRIEKSNKKTMIVIIVVALALIVTIIMTIIIIIY
HTKMPTSRPAVKHVDKFQNVQTKPRNFTPVNGQNLSQPIDDNMLGTTKIF
HQPSTLFRNEPLKDNHFEKLHDPINIDEYQQLMTTPTLLRIWHNNLNQYN
ELLPSDNTSHFQSSSSVPSPIPVQVFGESLRDLQKTISTEQSLSSNYLQS
SFV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000101muscle cell
PLANA:0000140anterior region of the whole animal
PLANA:0000418head
Vocabulary: INTERPRO
TermDefinition
IPR002126Cadherin-like_dom
IPR020894Cadherin_CS
IPR015919Cadherin-like_sf
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: molecular function
TermDefinition
GO:0005509calcium ion binding
GO:0004252serine-type endopeptidase activity
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0005886plasma membrane
GO:0016021integral component of membrane
Vocabulary: biological process
TermDefinition
GO:0007156homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007155cell adhesion
GO:0006508proteolysis
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002126Cadherin-likePRINTSPR00205CADHERINcoord: 265..284
score: 39.0
coord: 388..401
score: 32.26
coord: 34..63
score: 32.88
coord: 115..127
score: 26.0
coord: 478..495
score: 46.31
coord: 440..466
score: 27.5
IPR002126Cadherin-likeSMARTSM00112CA_2coord: 411..494
e-value: 1.8E-22
score: 90.7
coord: 56..148
e-value: 5.0E-17
score: 72.6
coord: 179..284
e-value: 4.0E-9
score: 46.3
coord: 312..388
e-value: 0.014
score: 22.9
coord: 520..608
e-value: 6.6E-7
score: 38.9
IPR002126Cadherin-likePFAMPF00028Cadherincoord: 395..487
e-value: 3.2E-15
score: 56.4
coord: 40..140
e-value: 3.4E-11
score: 43.4
coord: 506..594
e-value: 1.1E-12
score: 48.2
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 494..605
e-value: 3.4E-17
score: 64.8
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 386..493
e-value: 4.9E-25
score: 90.2
coord: 33..148
e-value: 1.3E-24
score: 88.8
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 284..385
e-value: 1.4E-10
score: 43.7
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 1..32
e-value: 8.6E-6
score: 28.0
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 161..283
e-value: 7.3E-12
score: 47.8
NoneNo IPR availablePANTHERPTHR24028:SF257coord: 2..364
coord: 372..646
NoneNo IPR availablePANTHERPTHR24028FAMILY NOT NAMEDcoord: 2..364
coord: 372..646
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 499..610
score: 13.729
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 35..150
score: 21.928
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 406..496
score: 23.265
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 2..34
score: 10.287
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 166..286
score: 14.233
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 287..390
score: 14.014
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 2..30
e-value: 4.88747E-4
score: 38.0634
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 39..145
e-value: 6.27915E-21
score: 86.2133
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 505..595
e-value: 1.50802E-14
score: 68.1089
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 290..385
e-value: 5.71141E-8
score: 49.2342
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 394..469
e-value: 3.34153E-17
score: 75.4277
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 166..282
e-value: 1.7159E-10
score: 56.553
NoneNo IPR availableTMHMMTMhelixcoord: 627..649
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 22..32
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 484..494
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 274..284
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 165..285
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 22..156
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 378..498
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 280..390
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 484..599