SMED30032478

Overview
NameSMED30032478
Smed IDSMED30032478
Length (bp)1173
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30032478 (SMED30032478) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30032478 (SMED30032478) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30032478 (SMED30032478) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30032478 (SMED30032478) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30032478

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 11

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
epidermisSMED30032478SMESG000065350.1 SMESG000058681.1 SMESG000023666.1 dd_Smed_v4_9347_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30032478SMESG000065350.1 SMESG000058681.1 SMESG000023666.1 dd_Smed_v4_9347_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30032478SMESG000065350.1 SMESG000058681.1 SMESG000023666.1 dd_Smed_v4_9347_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032478SMESG000069530.1 SMESG000050992.1 SMESG000041908.1 SMESG000009055.1 SMESG000005064.1 SMESG000072638.1 SMESG000051815.1 SMESG000051813.1 SMESG000039380.1 Contig16798newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032478SMESG000069530.1 SMESG000050992.1 SMESG000041908.1 SMESG000009055.1 SMESG000005064.1 SMESG000072638.1 SMESG000051815.1 SMESG000051813.1 SMESG000039380.1 Contig16798uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032478SMESG000041501.1 Contig47984newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032478SMESG000041501.1 Contig47984uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032478SMESG000065350.1 SMESG000022762.1 Contig13594newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032478SMESG000065350.1 SMESG000022762.1 Contig13594uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032478SMESG000065350.1 SMESG000062420.1 Contig35267newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30032478SMESG000065350.1 SMESG000062420.1 Contig35267uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
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BLAST of SMED30032478 vs. TrEMBL
Match: A0A1B6H5F2 (DDE_Tnp_IS1595 domain-containing protein (Fragment) OS=Homalodisca liturata OX=320908 GN=g.11270 PE=4 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.557e-50
Identity = 84/142 (59.15%), Postives = 107/142 (75.35%), Query Frame = -2 
Query:   36 DIVRTKEGAIRFLQDRGILNRRKACLNNHEMILSITDERERWRCTKKTCRNEVSLKSGSWLENINLSYTEVVLFIYSWSFELTSIKFCQRELSISSNATIIDWNNYLREVCASSLLRNPLIIGGPGLHVEIDESLFTRRKNN 461
            ++ ++KE  + F Q+  IL R K C N H+M LS+TD RERWRC K TCR ++ L+S +WLEN  L +  V+LFIY WS +LTS+ FC+REL I+ N TI+DWNNYLREVCA+ LL NPL+IGGPGL VEIDES+F +RK N
Sbjct:    1 ELTKSKERCVSFFQNIDILPREKLCENGHKMTLSVTDGRERWRCRKNTCRQDIQLRSNTWLENSRLGFDRVLLFIYCWSHKLTSVDFCERELKINHN-TIVDWNNYLREVCAAKLLANPLVIGGPGLTVEIDESVFAKRKYN 141
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BLAST of SMED30032478 vs. TrEMBL
Match: A0A1B6KB98 (Uncharacterized protein (Fragment) OS=Graphocephala atropunctata OX=36148 GN=g.52787 PE=4 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.703e-46
Identity = 77/149 (51.68%), Postives = 103/149 (69.13%), Query Frame = -2 
Query:   36 LNLLSLYDIVRTKEGAIRFLQDRGILNRRKACLNNHEMILSITDERERWRCTKKTCRNEVSLKSGSWLENINLSYTEVVLFIYSWSFELTSIKFCQRELSISSNATIIDWNNYLREVCASSLLRNPLIIGGPGLHVEIDESLFTRRKNN 482
            ++L  L   V  KE A+R+LQ++ +L+  + C   H M L + D R+RWRC  + CR  +SL+ G+WLEN  L     VLF+Y WS E T+ KFC +EL++S + TI DW NYLREVCA+SLL+ P+ +GGPGL VEIDES FT+RKNN
Sbjct:    1 MSLFMLAREVNNKESAVRYLQNKHVLHSDRVCAQGHNMSLHLADSRDRWRCNLRQCRTSISLRKGTWLENSKLPLDTFVLFVYCWSQEYTTTKFCSKELNMSLH-TITDWKNYLREVCANSLLQTPVKLGGPGLTVEIDESCFTKRKNN 148
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BLAST of SMED30032478 vs. TrEMBL
Match: A0A0A9YMJ9 (Putative transposase-like protein HI_1328.1 OS=Lygus hesperus OX=30085 GN=CM83_19026 PE=4 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 3.000e-41
Identity = 77/151 (50.99%), Postives = 108/151 (71.52%), Query Frame = -2 
Query:   33 LNLLSLYDIVRTKEGAIRFLQDRGILNRRKACLNNHEMILSITDERERWRCTKK-TCRNEVSLKSGSWLENINLSYTEVVLFIYSWSFELTSIKFCQRELSISSNATIIDWNNYLREVCASSLLRNPLIIGGPGLHVEIDESLFTRRKNNA 482
            +N LSLYD V+TKEGA+RFLQD+ IL +   C   H   L +   R+RW+C K+  CR   +L+S ++L    L  T++VLFIY+W+ E+ S+KFC++ELS++ N T++DW NY+ EVCA+S+LR    IGGP + VEIDESLF+RRKN+ 
Sbjct:    1 MNFLSLYDTVKTKEGAVRFLQDKKILPQNVTCSGGHTTALYL-GTRDRWQCNKRGCCRAGRALRSKTYLTGSKLPLTDIVLFIYAWANEMVSVKFCEKELSMNHN-TVVDWCNYMHEVCANSILRIQSRIGGPNMTVEIDESLFSRRKNHT 149
[Close]
BLAST of SMED30032478 vs. TrEMBL
Match: A0A146LFY4 (Putative transposase-like protein HI_1328.1 OS=Lygus hesperus OX=30085 GN=HI_1328.1_3 PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.917e-40
Identity = 76/151 (50.33%), Postives = 107/151 (70.86%), Query Frame = -2 
Query:   33 LNLLSLYDIVRTKEGAIRFLQDRGILNRRKACLNNHEMILSITDERERWRCTKK-TCRNEVSLKSGSWLENINLSYTEVVLFIYSWSFELTSIKFCQRELSISSNATIIDWNNYLREVCASSLLRNPLIIGGPGLHVEIDESLFTRRKNNA 482
            +N LSLYD V+TKEGA+RFLQD+ IL +   C   H   L +   R+RW+C K+  CR   +L+S ++L    L  T++VLFIY+W+ E+ S+KFC++ELS++ N T++ W NY+ EVCA+S+LR    IGGP + VEIDESLF+RRKN+ 
Sbjct:    1 MNFLSLYDTVKTKEGAVRFLQDKKILPQNVTCSGGHTTALYL-GTRDRWQCNKRGCCRAGRALRSKTYLTGSKLPLTDIVLFIYAWADEMVSVKFCEKELSMNHN-TVVGWCNYMHEVCANSILRIQSRIGGPNMTVEIDESLFSRRKNHT 149
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BLAST of SMED30032478 vs. TrEMBL
Match: A0A0L8GCZ9 (Uncharacterized protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22036317mg PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.520e-37
Identity = 72/159 (45.28%), Postives = 104/159 (65.41%), Query Frame = -2 
Query:    6 LNLLSLYDIVRTKEGAIRFLQDRGILNRRKACLNNHEMILSITDERERWRCTKKTCRNEVSLKSGSWLENINLSYTEVVLFIYSWSFELTSIKFCQRELSISSNATIIDWNNYLREVCASSLLRNPLIIGGPGLHVEIDESLFTRRKNNAFLGKLGIAF 482
            +NLL L DI + +  ++ F Q++GIL++ + C N H M  S    + RWRC  + CR E  L++ +W  N  LS  +VVLFIY W+   TSI+ C REL + +   ++DWNNYL+EVCA+ +L NP +I GP + VEIDES+F++RKN   +G+L  AF
Sbjct:    1 MNLLRLGDICKNETSSVTFFQEKGILHQERKCNNGHFMNFS-AGSQNRWRCRIRGCRQEQGLRTENWFANSRLSSRKVVLFIYCWTHNTTSIELCDRELEMKA-ICVVDWNNYLKEVCAAHILANPRVIVGPNMTVEIDESMFSKRKN--CVGRLLRAF 155
[Close]
BLAST of SMED30032478 vs. Ensembl Nematostella
Match: EDO42124 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2D6])

HSP 1 Score: 54.6842 bits (130), Expect = 2.053e-8
Identity = 44/153 (28.76%), Postives = 77/153 (50.33%), Query Frame = -2 
Query:   36 DIVRTKEGAIRFLQDRGILNRRKACLNNHE---MILSITDERE---RWRCTKKTCRNEVSLKSGSWL-ENINLSYTEVVLFIYSWSFEL---TSIKFCQRELSISSNATIIDWNNYLREVCASSLLRNPLI-IGGPGLHVEIDESLFTRRKNN 461
            +I  T    I +LQ RG+L R   C ++ +   MIL++  +R    +W           S+++GS+  E   +  +++V+ I+SW+ +L   TS + C       S   +   +  +R++CA  L R P+I  GGPG+  +IDES F  +  +
Sbjct:   70 NIGNTPLDVISWLQARGLLAREMLCPHHDQPIPMILTLCPDRSDGYKW----------TSVRNGSFFAEFPRIELSKIVIIIHSWAKKLKQKTSAEMCD-----VSERAVGHISARIRDICAEDLRRRPVIPFGGPGVVCQIDESRFNHKPKH 207
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BLAST of SMED30032478 vs. Planmine SMEST
Match: SMESG000036215.1 (SMESG000036215.1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.322e-21
Identity = 41/68 (60.29%), Postives = 55/68 (80.88%), Query Frame = -2 
Query:   63 LSYTEVVLFIYSWSFELTSIKFCQRELSISSNATIIDWNNYLREVCASSLLRNPLIIGGPGLHVEIDE 266
            LSY +++ FIY WS ELTSI+FC+ EL I   +++IDWNNY+REVCA++L+ NP++IGGP   VEIDE
Sbjct:   23 LSYRQII-FIYCWSKELTSIRFCETELEIFK-SSVIDWNNYMREVCANTLINNPIVIGGPNTTVEIDE 88
[Close]
BLAST of SMED30032478 vs. Planmine SMEST
Match: SMESG000079576.1 (SMESG000079576.1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.240e-20
Identity = 36/94 (38.30%), Postives = 61/94 (64.89%), Query Frame = -2 
Query:  201 LNLLSLYDIVRTKEGAIRFLQDRGILNRRKACLNNHEMILSITDERERWRCTKKTCRNEVSLKSGSWLENINLSYTEVVLFIYSWSFELTSIKF 482
            +NLL L +++  +  ++ FLQ R I++ ++ C N H M L ++D   RWR   +TCR  V+L+ G+WL+   L + +V+LFIY W+ E+TS+ +
Sbjct:    1 MNLLRLSNVIHDERSSMVFLQQRDIIHNKRLCSNGHSMKLDLSDTHCRWRYHIRTCRMTVALRQGTWLKGSKLPFRKVILFIYCWAHEMTSVDY 94
[Close]
BLAST of SMED30032478 vs. Planmine SMEST
Match: SMESG000002040.1 (SMESG000002040.1)

HSP 1 Score: 48.521 bits (114), Expect = 3.757e-6
Identity = 41/154 (26.62%), Postives = 75/154 (48.70%), Query Frame = -2 
Query:   21 IVRTKEGAIRFLQDRGILNRRKACLNNHEMILS-----ITDERERWRCTKKTC---RNEVSLKSGSWLENINLSYTEVVLFIYSWSFELTSIKFCQRELSISSNATIIDWNNYLREVCASSLLRNPLIIGGPGLHVEIDESLFTRRKNNAFLGK 458
            I  + E  + FL+  GIL     C    ++++      I D+ + +RC  K C   +   ++++ S+L + N+S   +++  + +S E+  + F + +L  S N TII     LR +C        +++G     VE+DESLF R K   + G+
Sbjct:   72 ITASTEVQVSFLRRMGILKEHIHCSYCEQIMVDHNCGKIKDKVD-FRCKNKACTKYKTTKAIRTNSFLASFNISLKNILVIFWKFSQEIQIVDF-KNDLECSEN-TIIKLYGALRRLCRDYYAGKRILLGDTQSIVEVDESLF-RHKPKYYRGR 221
[Close]
BLAST of SMED30032478 vs. Planmine SMEST
Match: SMESG000061180.1 (SMESG000061180.1)

HSP 1 Score: 45.8246 bits (107), Expect = 5.770e-6
Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = -2 
Query:   36 SISSNATIIDWNNYLREVCASSLLRNPLIIGGPGLHVEIDESLF-TRRKNN 185
            S+ S+ T++DW N++R+V     +  P  IGG G  V+IDESLF  +RK N
Sbjct:    5 SVKSSKTVVDWTNFIRDVMTKERIMKPK-IGGVGKRVQIDESLFRGKRKYN 54
The following BLAST results are available for this feature:
BLAST of SMED30032478 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1B6H5F21.557e-5059.15DDE_Tnp_IS1595 domain-containing protein (Fragment... [more]
A0A1B6KB982.703e-4651.68Uncharacterized protein (Fragment) OS=Graphocephal... [more]
A0A0A9YMJ93.000e-4150.99Putative transposase-like protein HI_1328.1 OS=Lyg... [more]
A0A146LFY42.917e-4050.33Putative transposase-like protein HI_1328.1 OS=Lyg... [more]
A0A0L8GCZ91.520e-3745.28Uncharacterized protein OS=Octopus bimaculoides OX... [more]
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BLAST of SMED30032478 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO421242.053e-828.76Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30032478 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30032478 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000036215.12.322e-2160.29SMESG000036215.1[more]
SMESG000079576.13.240e-2038.30SMESG000079576.1[more]
SMESG000002040.13.757e-626.62SMESG000002040.1[more]
SMESG000061180.15.770e-645.10SMESG000061180.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30032478 ID=SMED30032478|Name=SMED30032478|organism=Schmidtea mediterranea sexual|type=transcript|length=1173bp
ATAAAGAAAGCAATCCCCAGTTTCCCTAAAAATGCGTTGTTTTTTCTCCT
GGTAAATAGAGATTCATCAATCTCTACATGTAAACCAGGGCCACCGATGA
TCAAGGGATTTCGTAACAGACTACTGGCACAAACCTCTCGGAGATAATTG
TTCCAGTCAATGATGGTTGCGTTTGATGAAATACTTAACTCCCTTTGGCA
AAATTTAATCGAAGTTAATTCAAAACTCCAAGAATATATAAATAAAACAA
CTTCGGTATAAGAGAGGTTAATGTTTTCCAGCCAAGATCCAGACTTCAAA
GAAACCTCGTTTCTACAGGTTTTTTTCGTACATCTCCATCTTTCTCTTTC
ATCTGTGATCGATAAAATCATTTCGTGGTTGTTTAGGCATGCTTTGCGTC
GATTTAATATACCTCTATCTTGCAAAAATCTAATGGCACCTTCCTTGGTT
CGAACAATGTCATAAAGTGACAATAAGTTCAAATTAATCATTGATTTTTT
GTTAGGTTGATAATCCATCTTTAAAAGTATTAAATGCCCTATAATAAAAT
TTATTTAAAAAATGCGGGGCAATTCTAAACAAGCGCCGGTTTTAACTACT
CGAATCTAATATAAACCTTTCGCTATAGTTTATTGTACTTCATACTTTCC
TCTCGTGTATTTGTTTTATCATTTCTTTTCACTAACACCGTGTTTTTCGG
TGTTCTCTGTGTTATTCTGTAGAAGCTTTTTATCTAAATTGACATATTTG
TAGACCATTCTTTGAATATTCTTTTTCCAAAATCTCTTTCGGATGGCCTT
TGTATAATAATCTTCGCAAAAGTGGAATTCAAAATAAATTTGATTTCTGG
TAATAATTTACCCAATTCATGTGATCTTGATTTTTTTTAGAGTGATATGA
ATAATTCTGAATTGTCTTGACCTGTCAGTTCACCGAATGATGTTACGGGC
TTTGAGAACATAAATTTAAAGTCATTATATTATCTATAACTTTCAAATGC
TTTACTCCTGTCACAATATAAAATCTAGATGCTCCGTATTTTGAAATACA
ATTATATCTTAAGATTATAAAAGTTTTTCATCTTGTGATTTTGATGACCA
AATTGAAGAGAGAATTTGTTGCATCAGAACGTTCAAAATCGTTGAAGGAA
TTAAGTTACTTAGTAAATTCAAA
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protein sequence of SMED30032478-orf-1

>SMED30032478-orf-1 ID=SMED30032478-orf-1|Name=SMED30032478-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=172bp
MDYQPNKKSMINLNLLSLYDIVRTKEGAIRFLQDRGILNRRKACLNNHEM
ILSITDERERWRCTKKTCRNEVSLKSGSWLENINLSYTEVVLFIYSWSFE
LTSIKFCQRELSISSNATIIDWNNYLREVCASSLLRNPLIIGGPGLHVEI
DESLFTRRKNNAFLGKLGIAFF
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