pou4l-1

Overview


Name	pou4l-1 (AIX99546.1)
Smed ID	SMED30032426
Length (bp)	1462

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of pou4l-1 (SMED30032426) t-SNE clustered cells

Violin plots show distribution of expression levels for pou4l-1 (SMED30032426) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of pou4l-1 (SMED30032426) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for pou4l-1 (SMED30032426) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30032426

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 6

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
nervous system	SMED30032426	SMESG000013430.1	dd_Smed_v4_15555_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30032426	SMESG000013430.1	dd_Smed_v4_15555_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30032426	SMESG000013430.1	dd_Smed_v4_15555_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30032426	SMESG000013430.1	dd_Smed_v4_15555_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30032426	SMESG000013430.1	KJ187188	smed_ncbi_20200123	PMID:25356635 Cowles et al., 2014
neuron	SMED30032426	SMESG000013430.1	KJ187188	smed_ncbi_20200123	PMID:25356635 Cowles et al., 2014

Note: Hover over icons to view figure legend

Homology

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BLAST of pou4l-1 vs. Ensembl Human
Match: POU4F3 (POU class 4 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:9220])

HSP 1 Score: 239.965 bits (611), Expect = 1.436e-74
Identity = 125/160 (78.12%), Postives = 140/160 (87.50%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE    E+   P+++N S +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:  180 VESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPELFNGS-ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 338

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BLAST of pou4l-1 vs. Ensembl Human
Match: POU4F1 (POU class 4 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9218])

HSP 1 Score: 236.113 bits (601), Expect = 4.229e-72
Identity = 125/158 (79.11%), Postives = 138/158 (87.34%), Query Frame = 2

Query:  857 NYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTV 1330
            + DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE    E++  P+++N   ++KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS  
Sbjct:  262 DTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMNKPELFNGG-EKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAT 418

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BLAST of pou4l-1 vs. Ensembl Human
Match: POU4F2 (POU class 4 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9219])

HSP 1 Score: 234.958 bits (598), Expect = 7.224e-72
Identity = 123/158 (77.85%), Postives = 141/158 (89.24%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFST 1327
            ++ DPR+LE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE+   E+L  P+++N + ++KRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S 
Sbjct:  251 VDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLTKPELFNGA-EKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 407

[Close]

BLAST of pou4l-1 vs. Ensembl Human
Match: POU3F2 (POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9215])

HSP 1 Score: 136.346 bits (342), Expect = 1.393e-34
Identity = 83/161 (51.55%), Postives = 106/161 (65.84%), Query Frame = 2

Query:  833 PHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            PH  +D    D  +LE F+++FKQRRIKLG TQADVG ALG L  +     SQ+TICRFE+L LS  NM  LKP+L  WLEEA+  +        I      RK KRTSI  + K +LE++F   P+PS+++I  +AD L L+K VVRVWFCN+RQK+KRM
Sbjct:  258 PHSDEDTPTSD--DLEQFAKQFKQRRIKLGFTQADVGLALGTLYGN---VFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPTSIDKIAAQGRKRK-KRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 412

[Close]

BLAST of pou4l-1 vs. Ensembl Human
Match: POU3F3 (POU class 3 homeobox 3 [Source:HGNC Symbol;Acc:HGNC:9216])

HSP 1 Score: 135.961 bits (341), Expect = 3.739e-34
Identity = 84/162 (51.85%), Postives = 107/162 (66.05%), Query Frame = 2

Query:  833 PHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSL-SQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            PH  +D    D  +LE F+++FKQRRIKLG TQADVG ALG L     G++ SQ+TICRFE+L LS  NM  LKP+L  WLEEA+           I      RK KRTSI  + K +LE++F   P+PS+++I  +AD L L+K VVRVWFCN+RQK+KRM
Sbjct:  310 PHSDEDTPTSD--DLEQFAKQFKQRRIKLGFTQADVGLALGTL----YGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRK-KRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 464

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BLAST of pou4l-1 vs. Ensembl Celegans
Match: unc-86 (Transcription factor unc-86 [Source:UniProtKB/Swiss-Prot;Acc:P13528])

HSP 1 Score: 207.608 bits (527), Expect = 3.875e-63
Identity = 111/160 (69.38%), Postives = 127/160 (79.38%), Query Frame = 2

Query:  839 PIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYN--DSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKR 1312
            P    ++ DPR+LE F+E FKQRRIKLGVTQADVGKAL +LK+ GVGSLSQSTICRFESLTLSHNNMVALKPIL +WLE+AE    ++    DI     + D+KRKRTSI   EKR LE +F  QPRPS E+IA IAD+L+LKKNVVRVWFCNQRQKQKR
Sbjct:   95 PPTSDMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 254

[Close]

BLAST of pou4l-1 vs. Ensembl Celegans
Match: unc-86 (Transcription factor unc-86 [Source:UniProtKB/Swiss-Prot;Acc:P13528])

HSP 1 Score: 207.608 bits (527), Expect = 1.862e-62
Identity = 111/160 (69.38%), Postives = 127/160 (79.38%), Query Frame = 2

Query:  839 PIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYN--DSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKR 1312
            P    ++ DPR+LE F+E FKQRRIKLGVTQADVGKAL +LK+ GVGSLSQSTICRFESLTLSHNNMVALKPIL +WLE+AE    ++    DI     + D+KRKRTSI   EKR LE +F  QPRPS E+IA IAD+L+LKKNVVRVWFCNQRQKQKR
Sbjct:  151 PPTSDMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 310

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BLAST of pou4l-1 vs. Ensembl Celegans
Match: ceh-6 (Homeobox protein ceh-6 [Source:UniProtKB/Swiss-Prot;Acc:P20268])

HSP 1 Score: 125.946 bits (315), Expect = 9.267e-32
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 2

Query:  866 PRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSL-SQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRK-RTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDH 1342
            P +LE F+++FKQRRIKLG TQADVG ALG L     G++ SQ+TICRFE+L LS  NM  LKP+L  WLEEA+          +       RKRK RTSI    K  LE +F    +P++++I Q+A +L L+K VVRVWFCN+RQK+KR+  +  +  H
Sbjct:  192 PDDLEGFAKQFKQRRIKLGYTQADVGVALGTL----YGNIFSQTTICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGSPNSTFEKMTGQAGRKRKKRTSIEVNVKSRLEFHFQSNQKPNAQEITQVAMELQLEKEVVRVWFCNRRQKEKRIAPNQYDAPH 348

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BLAST of pou4l-1 vs. Ensembl Celegans
Match: ceh-18 (Homeobox protein ceh-18 [Source:UniProtKB/Swiss-Prot;Acc:P41934])

HSP 1 Score: 107.071 bits (266), Expect = 1.610e-24
Identity = 68/190 (35.79%), Postives = 98/190 (51.58%), Query Frame = 2

Query:  860 YDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDS--------------------------------------LDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
             D  ELE F++ FK++RIK G TQ DVG ALG  K  G    SQ+TI RFE+L LS  NM  L+P+L+ WL + E          D+ +                                        + R+RKRT++   ++ +L+ +FA+ PRP  +K+  IA+ L L ++VVRVWFCN+RQK +R+
Sbjct:  291 IDMNELEAFAQTFKKQRIKFGFTQGDVGVALG--KRYGT-DFSQTTISRFEALNLSFKNMCKLRPLLKEWLADVEMAIEGGATVTDLIDKKTIHNGNHHTIHHVDIHETSISNSISSVTASSLLSREQHVKRRRKRTNLDMNQRNALDTFFALNPRPDHDKMTDIANSLELDRDVVRVWFCNRRQKMRRV 477

[Close]

BLAST of pou4l-1 vs. Ensembl Celegans
Match: ceh-18 (Homeobox protein ceh-18 [Source:UniProtKB/Swiss-Prot;Acc:P41934])

HSP 1 Score: 106.686 bits (265), Expect = 1.832e-24
Identity = 68/190 (35.79%), Postives = 98/190 (51.58%), Query Frame = 2

Query:  860 YDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDS--------------------------------------LDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
             D  ELE F++ FK++RIK G TQ DVG ALG  K  G    SQ+TI RFE+L LS  NM  L+P+L+ WL + E          D+ +                                        + R+RKRT++   ++ +L+ +FA+ PRP  +K+  IA+ L L ++VVRVWFCN+RQK +R+
Sbjct:  293 IDMNELEAFAQTFKKQRIKFGFTQGDVGVALG--KRYGT-DFSQTTISRFEALNLSFKNMCKLRPLLKEWLADVEMAIEGGATVTDLIDKKTIHNGNHHTIHHVDIHETSISNSISSVTASSLLSREQHVKRRRKRTNLDMNQRNALDTFFALNPRPDHDKMTDIANSLELDRDVVRVWFCNRRQKMRRV 479

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BLAST of pou4l-1 vs. Ensembl Fly
Match: acj6 (gene:FBgn0000028 transcript:FBtr0305192)

HSP 1 Score: 227.639 bits (579), Expect = 6.894e-70
Identity = 125/162 (77.16%), Postives = 138/162 (85.19%), Query Frame = 2

Query:  836 HPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYN--DSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            HP  D    DPRELE F+ERFKQRRIKLGVTQADVGKAL NLKL GVG+LSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE QA  + ++PD  +   + ++KRKRTSI   EKRSLEAYFAVQPRPS EKIA IA+KL+LKKNVVRVWFCNQRQKQKR+
Sbjct:  183 HPDTDT---DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 341

[Close]

BLAST of pou4l-1 vs. Ensembl Fly
Match: acj6 (gene:FBgn0000028 transcript:FBtr0305193)

HSP 1 Score: 227.254 bits (578), Expect = 1.016e-69
Identity = 125/162 (77.16%), Postives = 138/162 (85.19%), Query Frame = 2

Query:  836 HPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYN--DSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            HP  D    DPRELE F+ERFKQRRIKLGVTQADVGKAL NLKL GVG+LSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE QA  + ++PD  +   + ++KRKRTSI   EKRSLEAYFAVQPRPS EKIA IA+KL+LKKNVVRVWFCNQRQKQKR+
Sbjct:  194 HPDTDT---DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 352

[Close]

BLAST of pou4l-1 vs. Ensembl Fly
Match: acj6 (gene:FBgn0000028 transcript:FBtr0305191)

HSP 1 Score: 227.254 bits (578), Expect = 1.019e-69
Identity = 125/162 (77.16%), Postives = 138/162 (85.19%), Query Frame = 2

Query:  836 HPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYN--DSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            HP  D    DPRELE F+ERFKQRRIKLGVTQADVGKAL NLKL GVG+LSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE QA  + ++PD  +   + ++KRKRTSI   EKRSLEAYFAVQPRPS EKIA IA+KL+LKKNVVRVWFCNQRQKQKR+
Sbjct:  190 HPDTDT---DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 348

[Close]

BLAST of pou4l-1 vs. Ensembl Fly
Match: acj6 (gene:FBgn0000028 transcript:FBtr0305196)

HSP 1 Score: 227.254 bits (578), Expect = 1.659e-69
Identity = 125/162 (77.16%), Postives = 138/162 (85.19%), Query Frame = 2

Query:  836 HPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYN--DSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            HP  D    DPRELE F+ERFKQRRIKLGVTQADVGKAL NLKL GVG+LSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE QA  + ++PD  +   + ++KRKRTSI   EKRSLEAYFAVQPRPS EKIA IA+KL+LKKNVVRVWFCNQRQKQKR+
Sbjct:  202 HPDTDT---DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 360

[Close]

BLAST of pou4l-1 vs. Ensembl Fly
Match: acj6 (gene:FBgn0000028 transcript:FBtr0074015)

HSP 1 Score: 226.868 bits (577), Expect = 3.560e-69
Identity = 125/162 (77.16%), Postives = 138/162 (85.19%), Query Frame = 2

Query:  836 HPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYN--DSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            HP  D    DPRELE F+ERFKQRRIKLGVTQADVGKAL NLKL GVG+LSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE QA  + ++PD  +   + ++KRKRTSI   EKRSLEAYFAVQPRPS EKIA IA+KL+LKKNVVRVWFCNQRQKQKR+
Sbjct:  220 HPDTD---TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 378

[Close]

BLAST of pou4l-1 vs. Ensembl Zebrafish
Match: pou4f1 (POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2])

HSP 1 Score: 240.35 bits (612), Expect = 1.178e-74
Identity = 127/159 (79.87%), Postives = 140/159 (88.05%), Query Frame = 2

Query:  857 NYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            + DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE    E++  PDI+N S ++KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKR+KFS  +
Sbjct:  211 DTDPRELEAFAERFKQRRIKLGVTQADVGGALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMSKPDIFNGS-EKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRLKFSAAH 368

[Close]

BLAST of pou4l-1 vs. Ensembl Zebrafish
Match: pou4f3 (POU class 4 homeobox 3 [Source:NCBI gene;Acc:30534])

HSP 1 Score: 237.654 bits (605), Expect = 4.372e-74
Identity = 125/160 (78.12%), Postives = 140/160 (87.50%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE    E+   PD++N + +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:  173 VESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNGKPDLFNGN-ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 331

[Close]

BLAST of pou4l-1 vs. Ensembl Zebrafish
Match: zgc:158291 (zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70])

HSP 1 Score: 237.654 bits (605), Expect = 6.671e-74
Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 2

Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVG LSQSTICRFESLTLSHNNMVALKPIL+AWLEEAER   E++  P+I+N   D+KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS  +
Sbjct:  188 DPRELESFAERFKQRRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQREKMAKPEIFNGG-DKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATH 343

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Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVG LSQSTICRFESLTLSHNNMVALKPIL+AWLEEAER   E++  P+I+N   D+KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS  +
Sbjct:  188 DPRELESFAERFKQRRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQREKMAKPEIFNGG-DKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATH 343

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BLAST of pou4l-1 vs. Ensembl Zebrafish
Match: pou4f2 (POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1])

HSP 1 Score: 230.72 bits (587), Expect = 1.442e-71
Identity = 122/159 (76.73%), Postives = 141/159 (88.68%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTV 1330
            ++ DPR+LE F+ERFKQRRIKLGVTQADVG AL +LK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE+   E+L  P+++N + ++KRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S  
Sbjct:  161 VDADPRDLEAFAERFKQRRIKLGVTQADVGSALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLNKPELFNGA-EKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAC 318

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BLAST of pou4l-1 vs. Ensembl Xenopus
Match: rnf220.1 (ring finger protein 220, gene 1 [Source:Xenbase;Acc:XB-GENE-485089])

HSP 1 Score: 239.965 bits (611), Expect = 1.172e-74
Identity = 126/175 (72.00%), Postives = 145/175 (82.86%), Query Frame = 2

Query:  833 PHPIQ--------DQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            PHP+         + +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWL+EAE    E+   P+++N S +RKRKRTSI   EKRSLEAYF++QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:  164 PHPVSSHNGMSCINDVESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLDEAEAAYREKNAKPELFNSS-ERKRKRTSIAAPEKRSLEAYFSIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 337

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BLAST of pou4l-1 vs. Ensembl Xenopus
Match: POU4F1 (POU class 4 homeobox 1 [Source:NCBI gene;Acc:100488759])

HSP 1 Score: 236.884 bits (603), Expect = 4.091e-73
Identity = 126/156 (80.77%), Postives = 137/156 (87.82%), Query Frame = 2

Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTV 1330
            DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE    E+L  P+++N   ++KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS  
Sbjct:  216 DPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKLNKPELFNGG-EKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAT 370

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BLAST of pou4l-1 vs. Ensembl Xenopus
Match: pou4f1.2 (POU class 4 homeobox 1 [Source:NCBI gene;Acc:100037865])

HSP 1 Score: 236.884 bits (603), Expect = 1.655e-72
Identity = 126/154 (81.82%), Postives = 136/154 (88.31%), Query Frame = 2

Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFS 1324
            DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVG LSQSTICRFESLTLSHNNMVALKPIL+AWLEEAER   E++  P+I+    D+KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS
Sbjct:  257 DPRELESFAERFKQRRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQREKMAKPEIFTGG-DKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFS 409

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BLAST of pou4l-1 vs. Ensembl Xenopus
Match: ppp2r2a (protein phosphatase 2 regulatory subunit B, alpha [Source:Xenbase;Acc:XB-GENE-971147])

HSP 1 Score: 233.417 bits (594), Expect = 1.301e-71
Identity = 123/157 (78.34%), Postives = 141/157 (89.81%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFS 1324
            ++ DPR+LE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE+   E+L  P+++N + ++KRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S
Sbjct:  221 VDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLTKPELFNGA-EKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYS 376

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BLAST of pou4l-1 vs. Ensembl Xenopus
Match: POU1F1 (POU class 1 homeobox 1 [Source:NCBI gene;Acc:100492413])

HSP 1 Score: 134.035 bits (336), Expect = 3.937e-35
Identity = 87/183 (47.54%), Postives = 120/183 (65.57%), Query Frame = 2

Query:  839 PIQDQLNYDP---RELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSL---DRKRKR-TSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMK-------FSTVNLDHH 1345
            PI + ++ D    RELE F+  FK RRIKLG TQ +VG+AL  +  S     SQ+TICRFE+L LS  N   LK IL  WL+EAE+  A       +YN+ +   +RKRKR T+I+ A K +LE++F  Q +PSS++I ++A+ LNL+K VVRVWFCN+RQ++KR+K       FS+ + DHH
Sbjct:  119 PIDEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVHGS---EFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGA-------LYNEKIGGNERKRKRRTTISIAAKEALESHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVKTSLHQNSFSSFSKDHH 291

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BLAST of pou4l-1 vs. Ensembl Mouse
Match: Pou4f3 (POU domain, class 4, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102523])

HSP 1 Score: 240.35 bits (612), Expect = 4.502e-76
Identity = 125/160 (78.12%), Postives = 140/160 (87.50%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE    E+   P+++N S +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:   98 VESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPELFNGS-ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 256

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BLAST of pou4l-1 vs. Ensembl Mouse
Match: Pou4f3 (POU domain, class 4, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102523])

HSP 1 Score: 239.965 bits (611), Expect = 9.342e-75
Identity = 125/160 (78.12%), Postives = 140/160 (87.50%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE    E+   P+++N S +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:  180 VESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPELFNGS-ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 338

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BLAST of pou4l-1 vs. Ensembl Mouse
Match: Pou4f1 (POU domain, class 4, transcription factor 1 [Source:MGI Symbol;Acc:MGI:102525])

HSP 1 Score: 235.728 bits (600), Expect = 3.373e-72
Identity = 125/158 (79.11%), Postives = 138/158 (87.34%), Query Frame = 2

Query:  857 NYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTV 1330
            + DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE    E++  P+++N   ++KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS  
Sbjct:  264 DTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMNKPELFNGG-EKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAT 420

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BLAST of pou4l-1 vs. Ensembl Mouse
Match: Pou4f2 (POU domain, class 4, transcription factor 2 [Source:MGI Symbol;Acc:MGI:102524])

HSP 1 Score: 235.343 bits (599), Expect = 4.710e-72
Identity = 123/158 (77.85%), Postives = 141/158 (89.24%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFST 1327
            ++ DPR+LE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE+   E+L  P+++N + ++KRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S 
Sbjct:  253 VDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLTKPELFNGA-EKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 409

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BLAST of pou4l-1 vs. Ensembl Mouse
Match: Pou3f2 (POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895])

HSP 1 Score: 136.346 bits (342), Expect = 9.859e-35
Identity = 83/161 (51.55%), Postives = 106/161 (65.84%), Query Frame = 2

Query:  833 PHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            PH  +D    D  +LE F+++FKQRRIKLG TQADVG ALG L  +     SQ+TICRFE+L LS  NM  LKP+L  WLEEA+  +        I      RK KRTSI  + K +LE++F   P+PS+++I  +AD L L+K VVRVWFCN+RQK+KRM
Sbjct:  260 PHSDEDTPTSD--DLEQFAKQFKQRRIKLGFTQADVGLALGTLYGN---VFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPTSIDKIAAQGRKRK-KRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 414

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BLAST of pou4l-1 vs. UniProt/SwissProt
Match: sp|Q63955|PO4F3_MOUSE (POU domain, class 4, transcription factor 3 OS=Mus musculus OX=10090 GN=Pou4f3 PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 6.535e-74
Identity = 125/160 (78.12%), Postives = 140/160 (87.50%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE    E+   P+++N S +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:  180 VESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPELFNGS-ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 338

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BLAST of pou4l-1 vs. UniProt/SwissProt
Match: sp|Q15319|PO4F3_HUMAN (POU domain, class 4, transcription factor 3 OS=Homo sapiens OX=9606 GN=POU4F3 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 6.894e-74
Identity = 125/160 (78.12%), Postives = 140/160 (87.50%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE    E+   P+++N S +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:  180 VESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPELFNGS-ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 338

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BLAST of pou4l-1 vs. UniProt/SwissProt
Match: sp|D3ZTL1|PO4F3_RAT (POU domain, class 4, transcription factor 3 OS=Rattus norvegicus OX=10116 GN=Pou4f3 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 7.273e-74
Identity = 125/160 (78.12%), Postives = 140/160 (87.50%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE    E+   P+++N S +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:  180 VESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPELFNGS-ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 338

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BLAST of pou4l-1 vs. UniProt/SwissProt
Match: sp|Q90435|PO4F3_DANRE (POU domain, class 4, transcription factor 3 OS=Danio rerio OX=7955 GN=pou4f3 PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 3.301e-73
Identity = 125/160 (78.12%), Postives = 140/160 (87.50%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE    E+   PD++N + +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:  173 VESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNGKPDLFNGN-ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 331

[Close]

BLAST of pou4l-1 vs. UniProt/SwissProt
Match: sp|Q91998|BRN3_CHICK (Brain-specific homeobox/POU domain protein 3 OS=Gallus gallus OX=9031 GN=BRN3 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.571e-73
Identity = 127/160 (79.38%), Postives = 137/160 (85.62%), Query Frame = 2

Query:  851 QLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTV 1330
            +   DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVG LSQSTICRFESLTLSHNNMVALKPIL+AWLEEAER   E++  P+IY    D+KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS  
Sbjct:  182 ETETDPRELESFAERFKQRRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQREKMTKPEIYTGG-DKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAT 340

[Close]

BLAST of pou4l-1 vs. TrEMBL
Match: A0A0A1CRK9 (POU domain protein (Fragment) OS=Schmidtea mediterranea OX=79327 GN=pou4l-1 PE=2 SV=1)

HSP 1 Score: 660.603 bits (1703), Expect = 0.000e+0
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 2

Query:  179 MEDFYDTKYLESSVALSSDIGNENLSYHSNHNNLYRNSWRCGAGSGHFFGSLENNILAARNDQFVNDITKSSAFHSSFLRHPDSLNPAAPSLYGFDHLAMXXXXXXXXXXXXXXXXXXGQLSSPPSNIYSNIGLTXXXXXIGYPMDAKLFAGISQNTHMYNSMPGNSILSRYPNMAAMASFTHSTANYCLXXXXXXXXXXXXXXXXXXXXXXXXXFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG 1351
            MEDFYDTKYLESSVALSSDIGNENLSYHSNHNNLYRNSWRCGAGSGHFFGSLENNILAARNDQFVNDITKSSAFHSSFLRHPDSLNPAAPSLYGFDHLAMSNSQAPVSSTSSSQFFSNGQLSSPPSNIYSNIGLTSSSSSIGYPMDAKLFAGISQNTHMYNSMPGNSILSRYPNMAAMASFTHSTANYCLPNQNNVSPPSQVSSAASSHSVSPQQFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPILQAWLEEAERQAAERLKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG
Sbjct:    1 MEDFYDTKYLESSVALSSDIGNENLSYHSNHNNLYRNSWRCGAGSGHFFGSLENNILAARNDQFVNDITKSSAFHSSFLRHPDSLNPAAPSLYGFDHLAMSNSQAPVSSTSSSQFFSNGQLSSPPSNIYSNIGLTSSSSSIGYPMDAKLFAGISQNTHMYNSMPGNSILSRYPNMAAMASFTHSTANYCLPNQNNVSPPSQVSSAASSHSVSPQQFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPILQAWLEEAERQAAERLKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG 391

[Close]

BLAST of pou4l-1 vs. TrEMBL
Match: Q94553 (Transcription factor (Fragment) OS=Girardia tigrina OX=6162 GN=GtPOU-4 PE=3 SV=2)

HSP 1 Score: 369.007 bits (946), Expect = 1.365e-122
Identity = 255/290 (87.93%), Postives = 263/290 (90.69%), Query Frame = 2

Query:  416 RHPDSLNPAAPSLYGFDHLAMXXXXXXXXXXXXXXXXXXGQLSSPPSNIYSNIGLTX------XXXXIGYPMDAKLFAGISQNTHMYNSMPGNSILSRYPNMAAMASFTHSTANYCLXXXXXXXXXXXXXXXXXXXXXXXXXFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKN 1267
            RHPDSLNPAAPSLYGFDHL M+NSQAPVSSTSSSQFFSNGQLSSPPSNIYSNIGL +      +  ++ Y  + +  A I        SMPGNSILSRYPNMAAMAS  H+TANYCLPNQNNVSPPSQVSSAASSHSVSPQQFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPILQAWLEEAERQAAERLKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKN
Sbjct:    1 RHPDSLNPAAPSLYGFDHLTMTNSQAPVSSTSSSQFFSNGQLSSPPSNIYSNIGLQAHLHQLDTRWTLNYSREFRKIASIC-----IISMPGNSILSRYPNMAAMASLQHTTANYCLPNQNNVSPPSQVSSAASSHSVSPQQFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPILQAWLEEAERQAAERLKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKN 285

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BLAST of pou4l-1 vs. TrEMBL
Match: A0A267ER71 (POU domain protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig000992g3 PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 1.974e-82
Identity = 142/168 (84.52%), Postives = 153/168 (91.07%), Query Frame = 2

Query:  833 PHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNL 1336
            P P   +L+YDPRELE F+ERFKQRRIKLGVTQADVGKALGNLKL GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE  A ERLKNPD Y D LD+KRKRTSITDAEKRSLEAYF VQPRPSSEKI+QIA+KLNLKKNVVRVWFCNQRQKQKRMKF++  +
Sbjct:  248 PQPPVGELDYDPRELEAFAERFKQRRIKLGVTQADVGKALGNLKLPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEHVAMERLKNPDFYGDGLDKKRKRTSITDAEKRSLEAYFHVQPRPSSEKISQIAEKLNLKKNVVRVWFCNQRQKQKRMKFASPGM 415

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BLAST of pou4l-1 vs. TrEMBL
Match: A0A094ZFM2 (POU domain protein OS=Schistosoma haematobium OX=6185 GN=MS3_11446 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 6.136e-81
Identity = 139/172 (80.81%), Postives = 159/172 (92.44%), Query Frame = 2

Query:  836 HPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG 1351
            HP++  L+Y+PRELE FSE FKQRRIKLGVTQADVGKALGNLK+SGVGSLSQSTICRFESLTLSHNNMVALKP+LQAWLEEAE +A+ RL +P+IY+   +R+RKRTSITD+EKRSLEA+F++QPRPSSEKIAQIA+KLNLKKNVVRVWFCNQRQKQKRMKFST+ + HHS 
Sbjct:   99 HPVE--LDYNPRELEAFSELFKQRRIKLGVTQADVGKALGNLKISGVGSLSQSTICRFESLTLSHNNMVALKPVLQAWLEEAEAEASSRLNHPNIYDLDEERRRKRTSITDSEKRSLEAFFSIQPRPSSEKIAQIAEKLNLKKNVVRVWFCNQRQKQKRMKFSTLGMLHHSA 268

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BLAST of pou4l-1 vs. TrEMBL
Match: A0A3P8GTS8 (POU domain protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS3607 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 2.574e-80
Identity = 134/167 (80.24%), Postives = 156/167 (93.41%), Query Frame = 2

Query:  851 QLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG 1351
            +++Y+PRELE FSE FKQRRIKLGVTQADVGKALGNLK++GVGSLSQSTICRFESLTLSHNNMVALKP+LQAWLEEAE  AAER ++P+IY+   +++RKRTSITD+EKRSLEA+F+VQPRPSSEKI+QIA+KLNL+KNVVRVWFCNQRQKQKRMKFST+ L HH+ 
Sbjct:   26 EVDYNPRELEAFSELFKQRRIKLGVTQADVGKALGNLKIAGVGSLSQSTICRFESLTLSHNNMVALKPVLQAWLEEAEADAAERSRHPEIYDPEEEKRRKRTSITDSEKRSLEAFFSVQPRPSSEKISQIAEKLNLRKNVVRVWFCNQRQKQKRMKFSTLGLLHHAA 192

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BLAST of pou4l-1 vs. Ensembl Cavefish
Match: zgc:158291 (brain-specific homeobox/POU domain protein 3-like [Source:NCBI gene;Acc:103033167])

HSP 1 Score: 238.81 bits (608), Expect = 2.775e-74
Identity = 127/157 (80.89%), Postives = 139/157 (88.54%), Query Frame = 2

Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVG LSQSTICRFESLTLSHNNMVALKPIL+AWLEEAER   E++  P+I+N + D+KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS  +
Sbjct:  199 DPRELESFAERFKQRRIKLGVTQADVGAALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQREKMTKPEIFNGA-DKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATH 354

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BLAST of pou4l-1 vs. Ensembl Cavefish
Match: pou4f1 (POU class 4 homeobox 1 [Source:NCBI gene;Acc:103044015])

HSP 1 Score: 237.654 bits (605), Expect = 1.591e-73
Identity = 125/159 (78.62%), Postives = 139/159 (87.42%), Query Frame = 2

Query:  857 NYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            + DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE    E++  P+I+N   ++KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKR+KFS  +
Sbjct:  223 DTDPRELEAFAERFKQRRIKLGVTQADVGGALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMSKPEIFNGG-EKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRLKFSAAH 380

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BLAST of pou4l-1 vs. Ensembl Cavefish
Match: pou4f2 (POU class 4 homeobox 2 [Source:NCBI gene;Acc:103047395])

HSP 1 Score: 234.187 bits (596), Expect = 1.149e-71
Identity = 122/159 (76.73%), Postives = 140/159 (88.05%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTV 1330
            ++ DPR+LE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPIL AWLEEAE+   E+L  P+++N + ++KRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S  
Sbjct:  265 VDADPRDLEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILHAWLEEAEKSHREKLSKPELFNGA-EKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAC 422

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BLAST of pou4l-1 vs. Ensembl Cavefish
Match: pou4f3 (POU class 4 homeobox 3 [Source:NCBI gene;Acc:103036569])

HSP 1 Score: 216.853 bits (551), Expect = 5.246e-66
Identity = 115/163 (70.55%), Postives = 131/163 (80.37%), Query Frame = 2

Query:  854 LNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIY---NDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            +  DPRELE F+ERFKQRR+KLGVTQADVG AL +L + GVG+LSQSTICRFESLTLSHNNM+AL+P+LQAWL+EAE +    L    +        +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL LKKNVVRVWFCNQRQKQKRMK+S   
Sbjct:  171 VESDPRELEAFAERFKQRRVKLGVTQADVGAALASLNMPGVGALSQSTICRFESLTLSHNNMIALRPVLQAWLDEAEAERRRALGANGVAPMGGLGAERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLELKKNVVRVWFCNQRQKQKRMKYSATQ 333

[Close]

BLAST of pou4l-1 vs. Ensembl Cavefish
Match: POU3F4 (POU class 3 homeobox 4 [Source:NCBI gene;Acc:103039910])

HSP 1 Score: 132.88 bits (333), Expect = 2.166e-34
Identity = 80/149 (53.69%), Postives = 101/149 (67.79%), Query Frame = 2

Query:  872 ELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSL-SQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            ELE F+++FKQRRIKLG TQADVG ALG L     G++ SQ+TICRFE+L LS  NM  LKP+L  WLEEA+           I      RK KRTSI  + K  LE +F   P+P++++I+ +AD L L+K VVRVWFCN+RQK+KRM
Sbjct:  185 ELEQFAKQFKQRRIKLGFTQADVGLALGTL----YGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPSSIDKIAAQGRKRK-KRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 328

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BLAST of pou4l-1 vs. Ensembl Sea Lamprey
Match: pou4f2 (POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1])

HSP 1 Score: 243.047 bits (619), Expect = 1.653e-76
Identity = 127/157 (80.89%), Postives = 139/157 (88.54%), Query Frame = 2

Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            DPRELE F+ERFKQRRIKLGVTQADVG ALGNLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE+    +   PD++N   ++KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS V+
Sbjct:  207 DPRELEAFAERFKQRRIKLGVTQADVGSALGNLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKAHRNKQTKPDLFNGG-EKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAVH 362

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BLAST of pou4l-1 vs. Ensembl Sea Lamprey
Match: pou2f1b (POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422])

HSP 1 Score: 120.939 bits (302), Expect = 1.080e-30
Identity = 73/159 (45.91%), Postives = 101/159 (63.52%), Query Frame = 2

Query:  863 DPR---ELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXX-----XXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            DPR   ELE+F++ FKQRRIKLG TQ DVG A+G  KL G    SQ+TI RFE+L LS  NM  LKP+L+          A+     +  +P        R++KRTSI    + +LE  F    +P+SE+++ IA++L+++K VVRVWFCN+RQK+KR+
Sbjct:  208 DPRDLEELEVFAKMFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDTEHIPADSSPGNQNASPSGLEGLGRRRKKRTSIDTHVRVALEKSFLENCKPTSEELSMIAEQLHMEKEVVRVWFCNRRQKEKRI 363

[Close]

BLAST of pou4l-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002675.1 (pep scaffold:Pmarinus_7.0:GL479714:4410:5816:-1 gene:ENSPMAG00000002443.1 transcript:ENSPMAT00000002675.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 88.1965 bits (217), Expect = 9.890e-21
Identity = 61/164 (37.20%), Postives = 93/164 (56.71%), Query Frame = 2

Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVG-SLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPD--IYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHH 1345
            D  E+  F++ FK RR+ LG+TQ  VG+AL     +  G + SQS ICRFE L L+  +   ++PIL+ W+ EAE +           I ++   R+++RTS T      L A+F V   P+S ++ QIA++L   + VVR+WFCN+RQ    +K +   + HH
Sbjct:    4 DLEEIREFAKVFKLRRLALGLTQTQVGQALS----AAEGPAYSQSAICRFEKLDLTPKSAQKMRPILERWMGEAEARHRMGTHTLTDFIGSEPSKRRKRRTSFTQEALVILNAHFDVGMHPTSAEMTQIAEQLGYDREVVRIWFCNKRQA---LKNTIKQIKHH 160

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BLAST of pou4l-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009070.1 (pep scaffold:Pmarinus_7.0:GL476573:36580:49436:1 gene:ENSPMAG00000008205.1 transcript:ENSPMAT00000009070.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 87.8113 bits (216), Expect = 1.632e-19
Identity = 58/153 (37.91%), Postives = 87/153 (56.86%), Query Frame = 2

Query:  857 NYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKN-PDIYNDSLDRKRKR-TSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQK 1309
            N    E+  F+  FK RR+ +G+TQ  VG+A+ + +     + SQS ICRFE L ++  +   +KP+L+ W+ EAE +    L++  D       RKR+R TS T     +L AYF     PS +++  IA+ L  ++ VVRVWFCN+RQ  K
Sbjct:  148 NMKLEEIREFARAFKIRRLSMGLTQTQVGQAMSSTE---APAYSQSAICRFEKLDITPKSAQKIKPVLERWMAEAEARQRTGLQSLSDFVGSEPSRKRRRRTSFTPQALEALNAYFERNTHPSGQEMTAIAEHLCYEREVVRVWFCNKRQMLK 297

[Close]

BLAST of pou4l-1 vs. Ensembl Sea Lamprey
Match: pou6f2 (POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71])

HSP 1 Score: 83.9593 bits (206), Expect = 2.823e-18
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = 2

Query:  848 DQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKN-PDIYNDSLDRKRKR-TSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQK 1309
            D +N +  E+  F+  FK RR+ LG+TQ  VG+AL   +     + SQS ICRFE L ++  +   +KP+L+ W+EEAE +    L++  D       +KRKR TS T      L A+F     PS +++  IA++L   + VVRVWFCN+RQ  K
Sbjct:  139 DGVNLE--EMREFARAFKIRRLSLGLTQTQVGQALSAAEGP---AYSQSAICRFEKLDITPKSAQKIKPVLERWMEEAEARKQAGLQSLSDFVGGEPSKKRKRRTSFTPQALELLNAHFERNTHPSGQEMTAIAERLCYDREVVRVWFCNKRQALK 289

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BLAST of pou4l-1 vs. Ensembl Yeast
Match: YOX1 (Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication [Source:SGD;Acc:S000004489])

HSP 1 Score: 49.2914 bits (116), Expect = 7.348e-7
Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 2

Query: 1106 KNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFST 1327
            K P I N  L R RKR   +  E   L+A F   P PS EK  ++A+  ++ +  V++WF N+RQ  KR + +T
Sbjct:  166 KEPKIDNAPLAR-RKRRRTSSQELSILQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKRQRIAT 238

[Close]

BLAST of pou4l-1 vs. Ensembl Nematostella
Match: EDO47033 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNB5])

HSP 1 Score: 215.698 bits (548), Expect = 1.885e-68
Identity = 117/155 (75.48%), Postives = 132/155 (85.16%), Query Frame = 2

Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFST 1327
            +PRELE F+ERFKQRRIKLGVTQADVG AL +LK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+L AWLEEAE+    +  N     +S D+KRKRTSI  AEKRSLEAYFA+ PRPSS+KIA IA+KL+L KNVVRVWFCNQRQK+KRMKFS 
Sbjct:    2 NPRELEWFAERFKQRRIKLGVTQADVGSALAHLKIPGVGSLSQSTICRFESLTLSHNNMMALKPVLTAWLEEAEKAYKTKQCNSAFLPNS-DKKRKRTSIGAAEKRSLEAYFAMNPRPSSDKIASIAEKLDLSKNVVRVWFCNQRQKKKRMKFSV 155

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BLAST of pou4l-1 vs. Ensembl Nematostella
Match: EDO33532 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRV9])

HSP 1 Score: 129.028 bits (323), Expect = 4.246e-35
Identity = 83/165 (50.30%), Postives = 110/165 (66.67%), Query Frame = 2

Query:  830 LPHPIQDQLNYDPR--ELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSL-SQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            L H I D  +  P   +LE F+++FKQRRIKLG TQADVG ALG L     G++ SQ+TICRFE+L LS  NM  LKP+LQ WLEEA+          D    +  +++KRTSI  A K +LE +F   P+P++++I+ +A+ L L K VVRVWFCN+RQK+KRM
Sbjct:   25 LQHDILDADDDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTL----YGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADNNNGATG-GVDKLATTGRKRKKRTSIEVAVKGALENHFCKSPKPTAQEISALAENLGLDKEVVRVWFCNRRQKEKRM 184

[Close]

BLAST of pou4l-1 vs. Ensembl Nematostella
Match: EDO43881 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXQ0])

HSP 1 Score: 119.398 bits (298), Expect = 8.010e-32
Identity = 74/160 (46.25%), Postives = 104/160 (65.00%), Query Frame = 2

Query:  866 PRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGS-LSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXX----XXXKNPD-----IYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            P EL  F+++F+QRR+ LG TQADVG ALG L     G+ LSQ+TICRFE+L LS  NM  LKP+LQ WL+E +  ++    E+ +NP       +N    ++++RT I    K  LE +F   PRPS+  I+ +A+ L L + VVRVWFCN+RQK++R+
Sbjct:    6 PDELSTFAKQFRQRRVALGFTQADVGVALGTL----YGNVLSQTTICRFEALQLSLKNMCKLKPLLQKWLQETDASSSGHEGEKQQNPSNFAFATHNGPYKKRKRRTIIEKNVKGVLENHFEKMPRPSTSDISSLAESLGLDREVVRVWFCNRRQKERRV 161

[Close]

BLAST of pou4l-1 vs. Ensembl Nematostella
Match: EDO38767 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SC36])

HSP 1 Score: 118.627 bits (296), Expect = 1.628e-31
Identity = 80/166 (48.19%), Postives = 106/166 (63.86%), Query Frame = 2

Query:  863 DP---RELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG 1351
            DP   RELE F+ +FK RRIKLG TQ +VG AL  +  +     SQ+TICRFE+L LS  N   LKPIL  WLEEAER      +          R+++RT+I  A K +LE +F  Q +PSS +I +IAD L L K VVRVWFCN+RQ++KR+K +++N+ +  G
Sbjct:    2 DPSKLRELEEFATQFKLRRIKLGFTQTNVGAALAAVHGT---DFSQTTICRFENLQLSFKNACKLKPILARWLEEAERSGGACGEKFGAER----RRKRRTTIGLAAKEALENHFMKQTKPSSPEIVRIADGLRLDKEVVRVWFCNRRQREKRVK-TSLNIHNFMG 159

[Close]

BLAST of pou4l-1 vs. Ensembl Nematostella
Match: EDO30968 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SZ94])

HSP 1 Score: 108.227 bits (269), Expect = 5.082e-28
Identity = 69/149 (46.31%), Postives = 96/149 (64.43%), Query Frame = 2

Query:  899 KQRRIKLGVTQADVGKALGNLKLSGVGS-LSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXX----XXXKNPD-----IYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            +QRR+ LG TQADVG ALG L     G+ LSQ+TICRFE+L LS  NM  LKP+LQ WL+E +  ++    E+ +NP       +N    ++++RT I    K  LE +F   PRPS+  I+ +A+ L L + VVRVWFCN+RQK++R+
Sbjct:    1 RQRRVALGFTQADVGVALGTL----YGNVLSQTTICRFEALQLSLKNMCKLKPLLQKWLQETDASSSGHEGEKQQNPSNFAFATHNGPYKKRKRRTIIEKNVKGVLENHFEKMPRPSTSDISSLAESLGLDREVVRVWFCNRRQKERRV 145

[Close]

BLAST of pou4l-1 vs. Ensembl Medaka
Match: pou4f3 (POU class 4 homeobox 3 [Source:NCBI gene;Acc:101171765])

HSP 1 Score: 239.195 bits (609), Expect = 2.144e-74
Identity = 125/162 (77.16%), Postives = 141/162 (87.04%), Query Frame = 2

Query:  848 DQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            + +  DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE    E+   PD++N + +RKRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S V+
Sbjct:  200 NDVESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKSNKPDLFNGN-ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 360

[Close]

BLAST of pou4l-1 vs. Ensembl Medaka
Match: pou4f1 (POU class 4 homeobox 1 [Source:NCBI gene;Acc:101156638])

HSP 1 Score: 239.195 bits (609), Expect = 3.026e-74
Identity = 126/159 (79.25%), Postives = 139/159 (87.42%), Query Frame = 2

Query:  857 NYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            + DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE    E++  PDI+N   ++KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKR+KFS  +
Sbjct:  213 DTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMSKPDIFNGG-EKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRLKFSAAH 370

[Close]

BLAST of pou4l-1 vs. Ensembl Medaka
Match: zgc:158291 (brain-specific homeobox/POU domain protein 3 [Source:NCBI gene;Acc:101157964])

HSP 1 Score: 237.654 bits (605), Expect = 7.813e-74
Identity = 127/157 (80.89%), Postives = 138/157 (87.90%), Query Frame = 2

Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVN 1333
            DPRELE F+ERFKQRRIKLGVTQADVG AL NLK+ GVG LSQSTICRFESLTLSHNNMVALKPIL+AWLEEAER   E++  P+I+N   D+KRKRTSI   EKRSLEAYFAVQPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMKFS  +
Sbjct:  193 DPRELESFAERFKQRRIKLGVTQADVGAALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQREKMSKPEIFNGG-DKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATH 348

[Close]

BLAST of pou4l-1 vs. Ensembl Medaka
Match: pou4f2 (POU class 4 homeobox 2 [Source:NCBI gene;Acc:101156468])

HSP 1 Score: 234.187 bits (596), Expect = 4.202e-72
Identity = 124/166 (74.70%), Postives = 144/166 (86.75%), Query Frame = 2

Query:  833 PHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTV 1330
            PH   + ++ DPR+LE F+ERFKQRRIKLGVTQADVG AL +LK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE+   E+L  P+++N + ++KRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S  
Sbjct:  216 PHMGMNDVDADPRDLEAFAERFKQRRIKLGVTQADVGSALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLNKPELFNGA-EKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAC 380

[Close]

BLAST of pou4l-1 vs. Ensembl Medaka
Match: pou4f2 (POU class 4 homeobox 2 [Source:NCBI gene;Acc:101156468])

HSP 1 Score: 233.417 bits (594), Expect = 2.835e-71
Identity = 124/166 (74.70%), Postives = 144/166 (86.75%), Query Frame = 2

Query:  833 PHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTV 1330
            PH   + ++ DPR+LE F+ERFKQRRIKLGVTQADVG AL +LK+ GVGSLSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE+   E+L  P+++N + ++KRKRTSI   EKRSLEAYFA+QPRPSSEKIA IA+KL+LKKNVVRVWFCNQRQKQKRMK+S  
Sbjct:  261 PHMGMNDVDADPRDLEAFAERFKQRRIKLGVTQADVGSALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLNKPELFNGA-EKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAC 425

[Close]

BLAST of pou4l-1 vs. Planmine SMEST
Match: SMESG000013430.1 (SMESG000013430.1)

HSP 1 Score: 660.603 bits (1703), Expect = 0.000e+0
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 2

Query:  179 MEDFYDTKYLESSVALSSDIGNENLSYHSNHNNLYRNSWRCGAGSGHFFGSLENNILAARNDQFVNDITKSSAFHSSFLRHPDSLNPAAPSLYGFDHLAMXXXXXXXXXXXXXXXXXXGQLSSPPSNIYSNIGLTXXXXXIGYPMDAKLFAGISQNTHMYNSMPGNSILSRYPNMAAMASFTHSTANYCLXXXXXXXXXXXXXXXXXXXXXXXXXFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG 1351
            MEDFYDTKYLESSVALSSDIGNENLSYHSNHNNLYRNSWRCGAGSGHFFGSLENNILAARNDQFVNDITKSSAFHSSFLRHPDSLNPAAPSLYGFDHLAMSNSQAPVSSTSSSQFFSNGQLSSPPSNIYSNIGLTSSSSSIGYPMDAKLFAGISQNTHMYNSMPGNSILSRYPNMAAMASFTHSTANYCLPNQNNVSPPSQVSSAASSHSVSPQQFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPILQAWLEEAERQAAERLKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG
Sbjct:    1 MEDFYDTKYLESSVALSSDIGNENLSYHSNHNNLYRNSWRCGAGSGHFFGSLENNILAARNDQFVNDITKSSAFHSSFLRHPDSLNPAAPSLYGFDHLAMSNSQAPVSSTSSSQFFSNGQLSSPPSNIYSNIGLTSSSSSIGYPMDAKLFAGISQNTHMYNSMPGNSILSRYPNMAAMASFTHSTANYCLPNQNNVSPPSQVSSAASSHSVSPQQFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPILQAWLEEAERQAAERLKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG 391

[Close]

BLAST of pou4l-1 vs. Planmine SMEST
Match: SMESG000030759.1 (SMESG000030759.1)

HSP 1 Score: 246.128 bits (627), Expect = 3.846e-77
Identity = 131/177 (74.01%), Postives = 150/177 (84.75%), Query Frame = 2

Query:  830 LPHPIQ----DQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHS 1348
            +  PIQ      + Y+ RELE F+E FKQRRIKL VTQADVG+ALGNLKL+GVGSLSQSTICRFESLTLSHNNM+ALKP+LQ WLE+AE +A ERL   D ++D  +RKRKRTSITD+EKRSLEA+F +QPRPSSEKI QIA+KLNLKKNVVRVWFCNQRQKQKRMKFST+   H+S
Sbjct:  177 MQQPIQVVNQGDIEYETRELEAFAEWFKQRRIKLRVTQADVGRALGNLKLAGVGSLSQSTICRFESLTLSHNNMIALKPVLQTWLEDAETEAKERLNGSDAFSDIDERKRKRTSITDSEKRSLEAFFTIQPRPSSEKIIQIAEKLNLKKNVVRVWFCNQRQKQKRMKFSTLGFQHNS 353

[Close]

BLAST of pou4l-1 vs. Planmine SMEST
Match: SMESG000076173.1 (SMESG000076173.1)

HSP 1 Score: 133.65 bits (335), Expect = 5.889e-34
Identity = 78/148 (52.70%), Postives = 102/148 (68.92%), Query Frame = 2

Query:  872 ELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            ELE F++ FKQRRIKLG TQADVG ALGNL  S     SQ+TICRFE+L LS  NM  L+P+L  WL+EA+          D    +  +++KRTSI    K +LE++F+ Q +P+++ I Q+AD L L+K VVRVWFCN+RQK+KRM
Sbjct:  214 ELEQFAKIFKQRRIKLGFTQADVGLALGNLYGS---VFSQTTICRFEALQLSFKNMCKLRPLLGKWLQEADSTGCAP-SGIDKVTAAGRKRKKRTSIEVGVKNALESHFSRQSKPTAQIITQLADSLGLEKEVVRVWFCNRRQKEKRM 357

[Close]

BLAST of pou4l-1 vs. Planmine SMEST
Match: SMESG000057970.1 (SMESG000057970.1)

HSP 1 Score: 122.865 bits (307), Expect = 8.855e-30
Identity = 78/149 (52.35%), Postives = 101/149 (67.79%), Query Frame = 2

Query:  872 ELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSL-SQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKRM 1315
            +LE F++ FKQRRIKLG TQADVG ALG L     G++ SQ+TICRFE+L LS  NM  L+P+LQ WL EA+  +        I   S  RK KRTSI    K  LE+ F    +PS++ I+ +A+KL+L+K VVRVWFCN+RQK+KR+
Sbjct:  272 DLEQFAKMFKQRRIKLGYTQADVGLALGTL----YGNVFSQTTICRFEALQLSFKNMCKLRPLLQKWLHEADSSSESPTNFDKISAQSRKRK-KRTSIEANVKLILESSFMKLSKPSAQDISSLAEKLSLEKEVVRVWFCNRRQKEKRI 415

[Close]

BLAST of pou4l-1 vs. Planmine SMEST
Match: SMESG000008858.1 (SMESG000008858.1)

HSP 1 Score: 119.398 bits (298), Expect = 1.668e-28
Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 2

Query:  863 DPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSL-SQSTICRFESLTLSHNNMVALKPIXXXXXXXXXXXXXXXXKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKNVVRVWFCNQRQKQKR 1312
            D RELE F++ FKQRRIKLG TQADVG ALG L     G++ SQ+TICRFE+L LS  NM  L+P+L  WLEEA+   +  + N +   +   +++KRT+I    K  LE+ F   P+P++  I  +++++ + K VVRVWFCN+RQK+K+
Sbjct:  312 DCRELEQFAKTFKQRRIKLGFTQADVGLALGTL----YGNVFSQTTICRFEALQLSFKNMNKLRPLLSKWLEEADLSLSNTVVNVEKLANQNRQRKKRTNIEMNTKDILESSFNKDPKPTAAHIISLSERILMDKEVVRVWFCNRRQKEKK 458

The following BLAST results are available for this feature:

BLAST of pou4l-1 vs. Ensembl Human
BLAST of pou4l-1 vs. Ensembl Celegans
BLAST of pou4l-1 vs. Ensembl Fly
BLAST of pou4l-1 vs. Ensembl Zebrafish
BLAST of pou4l-1 vs. Ensembl Xenopus
BLAST of pou4l-1 vs. Ensembl Mouse
BLAST of pou4l-1 vs. UniProt/SwissProt
BLAST of pou4l-1 vs. TrEMBL
BLAST of pou4l-1 vs. Ensembl Cavefish
BLAST of pou4l-1 vs. Ensembl Sea Lamprey
BLAST of pou4l-1 vs. Ensembl Yeast
BLAST of pou4l-1 vs. Ensembl Nematostella
BLAST of pou4l-1 vs. Ensembl Medaka
BLAST of pou4l-1 vs. Planmine SMEST

BLAST of pou4l-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
POU4F3	1.436e-74	78.13	POU class 4 homeobox 3 [Source:HGNC Symbol;Acc:HGN...	[more]
POU4F1	4.229e-72	79.11	POU class 4 homeobox 1 [Source:HGNC Symbol;Acc:HGN...	[more]
POU4F2	7.224e-72	77.85	POU class 4 homeobox 2 [Source:HGNC Symbol;Acc:HGN...	[more]
POU3F2	1.393e-34	51.55	POU class 3 homeobox 2 [Source:HGNC Symbol;Acc:HGN...	[more]
POU3F3	3.739e-34	51.85	POU class 3 homeobox 3 [Source:HGNC Symbol;Acc:HGN...	[more]

BLAST of pou4l-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
unc-86	3.875e-63	69.38	Transcription factor unc-86 [Source:UniProtKB/Swi...	[more]
unc-86	1.862e-62	69.38	Transcription factor unc-86 [Source:UniProtKB/Swi...	[more]
ceh-6	9.267e-32	49.07	Homeobox protein ceh-6 [Source:UniProtKB/Swiss-Pr...	[more]
ceh-18	1.610e-24	35.79	Homeobox protein ceh-18 [Source:UniProtKB/Swiss-P...	[more]
ceh-18	1.832e-24	35.79	Homeobox protein ceh-18 [Source:UniProtKB/Swiss-P...	[more]

BLAST of pou4l-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
acj6	6.894e-70	77.16	gene:FBgn0000028 transcript:FBtr0305192	[more]
acj6	1.016e-69	77.16	gene:FBgn0000028 transcript:FBtr0305193	[more]
acj6	1.019e-69	77.16	gene:FBgn0000028 transcript:FBtr0305191	[more]
acj6	1.659e-69	77.16	gene:FBgn0000028 transcript:FBtr0305196	[more]
acj6	3.560e-69	77.16	gene:FBgn0000028 transcript:FBtr0074015	[more]

BLAST of pou4l-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pou4f1	1.178e-74	79.87	POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
pou4f3	4.372e-74	78.13	POU class 4 homeobox 3 [Source:NCBI gene;Acc:30534...	[more]
zgc:158291	6.671e-74	80.89	zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]	[more]
zgc:158291	6.671e-74	80.89	zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]	[more]
pou4f2	1.442e-71	76.73	POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-0...	[more]

BLAST of pou4l-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rnf220.1	1.172e-74	72.00	ring finger protein 220, gene 1 [Source:Xenbase;Ac...	[more]
POU4F1	4.091e-73	80.77	POU class 4 homeobox 1 [Source:NCBI gene;Acc:10048...	[more]
pou4f1.2	1.655e-72	81.82	POU class 4 homeobox 1 [Source:NCBI gene;Acc:10003...	[more]
ppp2r2a	1.301e-71	78.34	protein phosphatase 2 regulatory subunit B, alpha ...	[more]
POU1F1	3.937e-35	47.54	POU class 1 homeobox 1 [Source:NCBI gene;Acc:10049...	[more]

BLAST of pou4l-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Pou4f3	4.502e-76	78.13	POU domain, class 4, transcription factor 3 [Sourc...	[more]
Pou4f3	9.342e-75	78.13	POU domain, class 4, transcription factor 3 [Sourc...	[more]
Pou4f1	3.373e-72	79.11	POU domain, class 4, transcription factor 1 [Sourc...	[more]
Pou4f2	4.710e-72	77.85	POU domain, class 4, transcription factor 2 [Sourc...	[more]
Pou3f2	9.859e-35	51.55	POU domain, class 3, transcription factor 2 [Sourc...	[more]

BLAST of pou4l-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q63955\|PO4F3_MOUSE	6.535e-74	78.13	POU domain, class 4, transcription factor 3 OS=Mus...	[more]
sp\|Q15319\|PO4F3_HUMAN	6.894e-74	78.13	POU domain, class 4, transcription factor 3 OS=Hom...	[more]
sp\|D3ZTL1\|PO4F3_RAT	7.273e-74	78.13	POU domain, class 4, transcription factor 3 OS=Rat...	[more]
sp\|Q90435\|PO4F3_DANRE	3.301e-73	78.13	POU domain, class 4, transcription factor 3 OS=Dan...	[more]
sp\|Q91998\|BRN3_CHICK	5.571e-73	79.38	Brain-specific homeobox/POU domain protein 3 OS=Ga...	[more]

BLAST of pou4l-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0A1CRK9	0.000e+0	100.00	POU domain protein (Fragment) OS=Schmidtea mediter...	[more]
Q94553	1.365e-122	87.93	Transcription factor (Fragment) OS=Girardia tigrin...	[more]
A0A267ER71	1.974e-82	84.52	POU domain protein OS=Macrostomum lignano OX=28230...	[more]
A0A094ZFM2	6.136e-81	80.81	POU domain protein OS=Schistosoma haematobium OX=6...	[more]
A0A3P8GTS8	2.574e-80	80.24	POU domain protein OS=Echinostoma caproni OX=27848...	[more]

BLAST of pou4l-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
zgc:158291	2.775e-74	80.89	brain-specific homeobox/POU domain protein 3-like ...	[more]
pou4f1	1.591e-73	78.62	POU class 4 homeobox 1 [Source:NCBI gene;Acc:10304...	[more]
pou4f2	1.149e-71	76.73	POU class 4 homeobox 2 [Source:NCBI gene;Acc:10304...	[more]
pou4f3	5.246e-66	70.55	POU class 4 homeobox 3 [Source:NCBI gene;Acc:10303...	[more]
POU3F4	2.166e-34	53.69	POU class 3 homeobox 4 [Source:NCBI gene;Acc:10303...	[more]

BLAST of pou4l-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pou4f2	1.653e-76	80.89	POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
pou2f1b	1.080e-30	45.91	POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-...	[more]
ENSPMAT00000002675.1	9.890e-21	37.20	pep scaffold:Pmarinus_7.0:GL479714:4410:5816:-1 ge...	[more]
ENSPMAT00000009070.1	1.632e-19	37.91	pep scaffold:Pmarinus_7.0:GL476573:36580:49436:1 g...	[more]
pou6f2	2.823e-18	39.10	POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-0...	[more]

BLAST of pou4l-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
YOX1	7.348e-7	37.84	Homeobox transcriptional repressor; binds to Mcm1p...	[more]

BLAST of pou4l-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO47033	1.885e-68	75.48	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO33532	4.246e-35	50.30	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO43881	8.010e-32	46.25	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO38767	1.628e-31	48.19	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO30968	5.082e-28	46.31	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of pou4l-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pou4f3	2.144e-74	77.16	POU class 4 homeobox 3 [Source:NCBI gene;Acc:10117...	[more]
pou4f1	3.026e-74	79.25	POU class 4 homeobox 1 [Source:NCBI gene;Acc:10115...	[more]
zgc:158291	7.813e-74	80.89	brain-specific homeobox/POU domain protein 3 [Sour...	[more]
pou4f2	4.202e-72	74.70	POU class 4 homeobox 2 [Source:NCBI gene;Acc:10115...	[more]
pou4f2	2.835e-71	74.70	POU class 4 homeobox 2 [Source:NCBI gene;Acc:10115...	[more]

BLAST of pou4l-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000013430.1	0.000e+0	100.00	SMESG000013430.1	[more]
SMESG000030759.1	3.846e-77	74.01	SMESG000030759.1	[more]
SMESG000076173.1	5.889e-34	52.70	SMESG000076173.1	[more]
SMESG000057970.1	8.855e-30	52.35	SMESG000057970.1	[more]
SMESG000008858.1	1.668e-28	47.68	SMESG000008858.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Cross References

External references for this transcript


Database	Accession
SmedGD GBrowse	SMED30032426
GenBank	AIX99546.1

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30032426 ID=SMED30032426|Name=pou4l-1|organism=Schmidtea mediterranea sexual|type=transcript|length=1462bp
AATATGCTAAATCGTGTTAATTGACCGTAGCCTGACTGTTTAATTATTAA
AGCTATACTTTAGACTTACTTGTCAACTGCGACCTAGTTTGAATATTTTA
GTGCTCTTCAAAATTAACGATTTATTCGAAAGGGGAAAAAAATCAATTCC
TCACAATAAAAAATATTTGCCGCAATTAATGGAAGATTTTTACGATACCA
AGTATCTGGAATCCTCGGTGGCTTTGTCGTCGGATATCGGAAATGAGAAT
CTCTCTTATCATTCTAATCATAACAATCTCTACAGAAACAGCTGGAGATG
TGGAGCGGGATCTGGACATTTTTTCGGATCTTTAGAAAACAATATTCTTG
CAGCAAGAAACGACCAATTCGTGAATGATATTACGAAATCTTCTGCTTTT
CATTCGAGTTTCCTACGACATCCGGATTCCTTAAATCCAGCCGCACCATC
GTTGTATGGGTTTGATCATCTAGCAATGTCGAATAGTCAAGCTCCAGTTA
GCTCAACTTCATCATCTCAGTTTTTCTCAAACGGTCAGTTATCATCTCCT
CCATCAAATATTTATTCAAATATTGGCCTAACGAGTTCATCCTCCTCAAT
CGGATATCCGATGGATGCTAAATTATTTGCCGGAATTTCACAAAACACAC
ACATGTATAATTCAATGCCTGGAAATAGCATTTTAAGTCGCTATCCTAAC
ATGGCGGCAATGGCCTCATTTACACACTCCACTGCCAACTATTGCTTGCC
GAATCAGAACAATGTCAGCCCCCCAAGTCAAGTTAGCAGTGCCGCTAGCA
GTCATTCGGTGAGCCCTCAACAATTTACCTTGCCACATCCAATACAAGAT
CAACTCAATTATGATCCGAGAGAATTAGAAATCTTTTCCGAGAGGTTTAA
ACAGCGTCGAATTAAACTCGGAGTCACACAAGCTGATGTTGGTAAAGCGT
TAGGAAATCTCAAACTCAGCGGAGTCGGTTCATTGAGCCAAAGTACAATT
TGTCGGTTTGAATCATTGACTCTTAGTCACAACAATATGGTGGCTCTAAA
ACCAATTTTACAAGCATGGCTCGAAGAAGCTGAAAGACAGGCGGCTGAAA
GACTGAAAAATCCAGACATCTACAACGACAGTCTTGACAGGAAACGTAAA
CGAACCTCTATCACAGACGCAGAGAAACGATCTCTCGAAGCTTATTTTGC
CGTCCAACCTCGACCATCAAGTGAGAAAATAGCCCAAATCGCCGACAAAT
TAAACCTGAAAAAGAACGTCGTTCGAGTTTGGTTTTGCAATCAAAGACAG
AAACAGAAACGGATGAAATTTTCCACAGTAAATCTCGATCATCATTCTGG
ATAAATATTTCTCGCTTGATCAGCGATTTATTTGAACAAAAAAAAATTAT
TTTCGACATTATCCGTCCGTTTTGATGAATCTATTGCCCTAATCGAAATT
CTCCACCATGAT

protein sequence of SMED30032426-orf-1

>SMED30032426-orf-1 ID=SMED30032426-orf-1|Name=SMED30032426-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=392bp
MEDFYDTKYLESSVALSSDIGNENLSYHSNHNNLYRNSWRCGAGSGHFFG
SLENNILAARNDQFVNDITKSSAFHSSFLRHPDSLNPAAPSLYGFDHLAM
SNSQAPVSSTSSSQFFSNGQLSSPPSNIYSNIGLTSSSSSIGYPMDAKLF
AGISQNTHMYNSMPGNSILSRYPNMAAMASFTHSTANYCLPNQNNVSPPS
QVSSAASSHSVSPQQFTLPHPIQDQLNYDPRELEIFSERFKQRRIKLGVT
QADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPILQAWLEE
AERQAAERLKNPDIYNDSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEK
IAQIADKLNLKKNVVRVWFCNQRQKQKRMKFSTVNLDHHSG*

Aliases

The feature 'pou4l-1' has the following synonyms


Synonym
pou4*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000025	nervous system
PLANA:0000099	neuron

Vocabulary: **INTERPRO**
Term	Definition
IPR015584	POU4-TF1
IPR001387	Cro/C1-type_HTH
IPR013847	POU
IPR001356	Homeobox_dom
IPR000327	POU_dom
IPR009057	Homeobox-like_sf
IPR010982	Lambda_DNA-bd_dom_sf
IPR017970	Homeobox_CS

Vocabulary: **molecular function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **biological process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0006351	transcription, DNA-templated

Vocabulary: **cellular component**
Term	Definition
GO:0005634	nucleus

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013847	POU domain	PRINTS	PR00028	POUDOMAIN	coord: 320..340 score: 45.09 coord: 244..261 score: 74.13 coord: 355..370 score: 72.01 coord: 270..283 score: 78.72 coord: 286..301 score: 64.45
IPR000327	POU-specific domain	SMART	SM00352	pou	coord: 225..302 e-value: 2.4E-47 score: 173.3
IPR000327	POU-specific domain	PFAM	PF00157	Pou	coord: 231..302 e-value: 1.5E-29 score: 101.8
IPR000327	POU-specific domain	PROSITE	PS00035	POU_1	coord: 243..255
IPR000327	POU-specific domain	PROSITE	PS00465	POU_2	coord: 270..283
IPR000327	POU-specific domain	PROSITE	PS51179	POU_3	coord: 225..302 score: 46.835
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 321..383 e-value: 1.2E-19 score: 81.3
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 322..378 e-value: 1.3E-18 score: 66.6
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 319..379 score: 17.443
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 322..380 e-value: 8.82358E-18 score: 74.5872
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	G3DSA:1.10.260.40		coord: 228..311 e-value: 1.3E-31 score: 110.2
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains	coord: 227..302
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 324..371 e-value: 1.4E-20 score: 74.9
None	No IPR available	PANTHER	PTHR11636	POU DOMAIN	coord: 153..383
IPR015584	POU domain, class 4, transcription factor 1	PANTHER	PTHR11636:SF42	POU DOMAIN, CLASS 4, TRANSCRIPTION FACTOR 1	coord: 153..383
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 354..377
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 237..279 e-value: 3.80003E-4 score: 36.377
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 315..380