ATP-dependent RNA helicase DDX24
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30032193 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Human
Match: DDX24 (DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]) HSP 1 Score: 307.76 bits (787), Expect = 7.233e-97 Identity = 175/428 (40.89%), Postives = 273/428 (63.79%), Query Frame = 1
Query: 472 CKPY--QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYL 1734
CK Y + + GLVLTPTRELA QV H+ +FT ++ + GGMS ++Q+R+L RRPEIVV TPGR W I+++ H + +L LV+DEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK T K+ K +KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ E+ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA N G S++++ P ++ F K+ +L+K E + +Q K ++ +E ++LAR+IE + + +W E+ A +I+L++++ + A +++ + +K+ + L ++++L
Sbjct: 6 CKAYPKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLE---------MLNDSQYNPKRQTLVFSATLTLVHQAPA-RILHKKHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDE-KDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIRLARQIEKSEYRNFQACLHNSWIEQAAAALEIELEEDMYKGGKA-DQQEERRRQKQMKVLKKELRHL 421
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Human
Match: DDX24 (DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]) HSP 1 Score: 307.76 bits (787), Expect = 7.233e-97 Identity = 175/428 (40.89%), Postives = 273/428 (63.79%), Query Frame = 1
Query: 472 CKPY--QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYL 1734
CK Y + + GLVLTPTRELA QV H+ +FT ++ + GGMS ++Q+R+L RRPEIVV TPGR W I+++ H + +L LV+DEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK T K+ K +KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ E+ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA N G S++++ P ++ F K+ +L+K E + +Q K ++ +E ++LAR+IE + + +W E+ A +I+L++++ + A +++ + +K+ + L ++++L
Sbjct: 6 CKAYPKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLE---------MLNDSQYNPKRQTLVFSATLTLVHQAPA-RILHKKHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDE-KDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIRLARQIEKSEYRNFQACLHNSWIEQAAAALEIELEEDMYKGGKA-DQQEERRRQKQMKVLKKELRHL 421
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Human
Match: DDX24 (DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]) HSP 1 Score: 308.916 bits (790), Expect = 3.230e-96 Identity = 176/432 (40.74%), Postives = 274/432 (63.43%), Query Frame = 1
Query: 460 KEDNCKPY--QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYL 1734
K CK Y + + GLVLTPTRELA QV H+ +FT ++ + GGMS ++Q+R+L RRPEIVV TPGR W I+++ H + +L LV+DEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK T K+ K +KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ E+ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA N G S++++ P ++ F K+ +L+K E + +Q K ++ +E ++LAR+IE + + +W E+ A +I+L++++ + A +++ + +K+ + L ++++L
Sbjct: 126 KSATCKAYPKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLE---------MLNDSQYNPKRQTLVFSATLTLVHQAPA-RILHKKHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDE-KDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIRLARQIEKSEYRNFQACLHNSWIEQAAAALEIELEEDMYKGGKA-DQQEERRRQKQMKVLKKELRHL 545
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Human
Match: DDX24 (DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]) HSP 1 Score: 308.916 bits (790), Expect = 3.230e-96 Identity = 176/432 (40.74%), Postives = 274/432 (63.43%), Query Frame = 1
Query: 460 KEDNCKPY--QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYL 1734
K CK Y + + GLVLTPTRELA QV H+ +FT ++ + GGMS ++Q+R+L RRPEIVV TPGR W I+++ H + +L LV+DEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK T K+ K +KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ E+ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA N G S++++ P ++ F K+ +L+K E + +Q K ++ +E ++LAR+IE + + +W E+ A +I+L++++ + A +++ + +K+ + L ++++L
Sbjct: 126 KSATCKAYPKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLE---------MLNDSQYNPKRQTLVFSATLTLVHQAPA-RILHKKHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDE-KDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIRLARQIEKSEYRNFQACLHNSWIEQAAAALEIELEEDMYKGGKA-DQQEERRRQKQMKVLKKELRHL 545
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Human
Match: DDX24 (DEAD-box helicase 24 [Source:HGNC Symbol;Acc:HGNC:13266]) HSP 1 Score: 309.301 bits (791), Expect = 6.536e-96 Identity = 176/432 (40.74%), Postives = 274/432 (63.43%), Query Frame = 1
Query: 460 KEDNCKPY--QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYL 1734
K CK Y + + GLVLTPTRELA QV H+ +FT ++ + GGMS ++Q+R+L RRPEIVV TPGR W I+++ H + +L LV+DEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK T K+ K +KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ E+ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA N G S++++ P ++ F K+ +L+K E + +Q K ++ +E ++LAR+IE + + +W E+ A +I+L++++ + A +++ + +K+ + L ++++L
Sbjct: 126 KSATCKAYPKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLE---------MLNDSQYNPKRQTLVFSATLTLVHQAPA-RILHKKHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDE-KDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIRLARQIEKSEYRNFQACLHNSWIEQAAAALEIELEEDMYKGGKA-DQQEERRRQKQMKVLKKELRHL 545
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Celegans
Match: F55F8.2 (pep chromosome:WBcel235:I:5646369:5649656:-1 gene:WBGene00018890.1 transcript:F55F8.2a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F55F8.2) HSP 1 Score: 242.276 bits (617), Expect = 4.879e-70 Identity = 149/395 (37.72%), Postives = 233/395 (58.99%), Query Frame = 1
Query: 496 GLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLL-KRRPEIVVVTPGRFWAFIQDQDPHALSAS--KLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPM-IIDTTIDVAQ---LSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKNIEY------YEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDD 1641
L++ PTREL Q+ H+ T L +I GG++ +QER++ ++RP+IVV TPGR WA +Q+ + A L LV+DE DR++E+G+FAE+ + +N + + + QTLVFSATLTF + D V ++ KK +L+ K+ ++ G++E +ID T + L + +I C +KDT L + L + GRTIVF NS ++ RRL SVL+++ + P L+A M QK RLK LE FS+++N++L+A+DVAARGLDI ID VIH+ V E ++HRSGRTARA + G +++++ P + KL L + ++D+ + I++ ++ V+LA EI+S K + + +WFEK A AD+ D+
Sbjct: 238 ALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEESEKEKL--------QTLVFSATLTFAKAQD-VAEEEKKKAKELSSQQKIQRLIKLTGLRENKHKVIDLTRQMGTAGCLVEARINCGNLLEKDTSLVYLLTRYPGRTIVFVNSIDAARRLYSVLKSVNIDPMILHAKMIQKQRLKNLEKFSESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARASHRGLTVVLVDPPSRQFYMKLCKGLNR----MQDLNVFPIDFEPLMNAIKKRVRLASEIDSLGFRCKKIKMSESWFEKAARAADLDYDE 619 HSP 2 Score: 73.9442 bits (180), Expect = 2.048e-13 Identity = 40/67 (59.70%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 70 LNNWKNLY-IPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL 267
++ WK Y +P VL+AIE+ GF +PT+IQ+ VLP A+RDR D+LGAA TG+GKTLAFGIP+++R+L
Sbjct: 153 ISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLL 219
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Celegans
Match: T26G10.1 (Putative ATP-dependent RNA helicase T26G10.1 [Source:UniProtKB/Swiss-Prot;Acc:P34580]) HSP 1 Score: 148.673 bits (374), Expect = 3.004e-38 Identity = 106/343 (30.90%), Postives = 167/343 (48.69%), Query Frame = 1
Query: 484 QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTI---DVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQ 1500
Q + LVLTPTRELA Q+ + L I GG+ Q L RRP I+V TPGR +++ L A L L++DEADRIL E+ D+ + +P + R+T +FSAT+T V K +E+ +++ P + + V L Q I P + K+T L + L H G + IVF + + ++ +L+ LG+ L+ M Q+ RL L F +L+ +DVAARGLDIP +D VI++D+ ++ ++HR GRTARA SG +I +++ ++ + K+ +L K + K ++
Sbjct: 111 QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKA--LKFLIMDEADRILNMDFEVEL------------DKILKVIP-RERRTYLFSATMT-----KKVSK------------------LERASLRD-PARVSVSSRYKTVDNLKQHYIFVPNKY-KETYLVYLLNEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLGKKLDEYKCVE 413
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Celegans
Match: H20J04.4 (pep chromosome:WBcel235:II:4329023:4334091:1 gene:WBGene00019219.1 transcript:H20J04.4b.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H20J04.4) HSP 1 Score: 146.362 bits (368), Expect = 4.199e-37 Identity = 102/322 (31.68%), Postives = 156/322 (48.45%), Query Frame = 1
Query: 478 PYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQ-DQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLT----FVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNH-----QGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSI 1413
PY IY L+LTPTRELA Q+ + + L+ I GG S Q R L RP +VV TPGR I+ D D A K+ V+DEADR+LE + +++ + + RQTL+ SAT+T +H K F E G + ++T+D +L Q ++CP KD L + +KN+ + ++FA + + L + + LG SL++ + QK RL L +F ++I +DVA+RGLDIP +D V++ +V +T++HR GR+ARA G ++
Sbjct: 155 PY-GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESIS-------------EKRQTLLLSATITNNINMLHRVSTRKP----------------YFFEDKGKDD-----ESTVD--RLEQKYVVCPVAV-KDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSAL 438
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Celegans
Match: H20J04.4 (pep chromosome:WBcel235:II:4329023:4334484:1 gene:WBGene00019219.1 transcript:H20J04.4b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H20J04.4) HSP 1 Score: 146.362 bits (368), Expect = 4.199e-37 Identity = 102/322 (31.68%), Postives = 156/322 (48.45%), Query Frame = 1
Query: 478 PYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQ-DQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLT----FVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNH-----QGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSI 1413
PY IY L+LTPTRELA Q+ + + L+ I GG S Q R L RP +VV TPGR I+ D D A K+ V+DEADR+LE + +++ + + RQTL+ SAT+T +H K F E G + ++T+D +L Q ++CP KD L + +KN+ + ++FA + + L + + LG SL++ + QK RL L +F ++I +DVA+RGLDIP +D V++ +V +T++HR GR+ARA G ++
Sbjct: 155 PY-GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESIS-------------EKRQTLLLSATITNNINMLHRVSTRKP----------------YFFEDKGKDD-----ESTVD--RLEQKYVVCPVAV-KDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSAL 438
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Celegans
Match: H20J04.4 (pep chromosome:WBcel235:II:4329023:4332507:1 gene:WBGene00019219.1 transcript:H20J04.4a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H20J04.4) HSP 1 Score: 145.206 bits (365), Expect = 4.254e-37 Identity = 102/322 (31.68%), Postives = 156/322 (48.45%), Query Frame = 1
Query: 478 PYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQ-DQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLT----FVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNH-----QGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSI 1413
PY IY L+LTPTRELA Q+ + + L+ I GG S Q R L RP +VV TPGR I+ D D A K+ V+DEADR+LE + +++ + + RQTL+ SAT+T +H K F E G + ++T+D +L Q ++CP KD L + +KN+ + ++FA + + L + + LG SL++ + QK RL L +F ++I +DVA+RGLDIP +D V++ +V +T++HR GR+ARA G ++
Sbjct: 155 PY-GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESIS-------------EKRQTLLLSATITNNINMLHRVSTRKP----------------YFFEDKGKDD-----ESTVD--RLEQKYVVCPVAV-KDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGRFGSAL 438
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Fly
Match: CG9143 (gene:FBgn0034496 transcript:FBtr0086304) HSP 1 Score: 335.495 bits (859), Expect = 4.837e-104 Identity = 210/533 (39.40%), Postives = 316/533 (59.29%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEF--AWNDDEIKPELFTGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHS-ADAVKKQMXXXX---XXXXXXXXXXXFVEKLGMKECPMIIDTTID--VAQ-LSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLD 1638
++ W L +P +L+A+ ++GF PTQIQ L LP AI + DILGAA TG+GKTLAFGIPM++ I+ KQ+ I I ++ ++ D+ +L+P EL+ +D+E E E + +YGLVLTPTRELA QV +HL A ++T ++V AIFGG++ +QER+L++ P+IVV TPGR W + H +S LVIDE DR++EKGHF E+ + + + ++ + RQ V+SATLT VH D ++K+ K T + K+ + +E+LG+ + P I+D T AQ L++ ++LCP + KD LY+F++ H GRTIVF NS + V+RL ++ L +P L+A+M QK RLK LE F + LLIA+DVAARGLDIP ++ VIH+ V T+E ++HRSGRTARA G +++ + P E+ + KL +L+++E + I + + E V LAR+++ + K V + R W +K AE+ D+ +D
Sbjct: 214 MSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELKQRNIR----SGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGASDEESDAE-----------EQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKGHFEELRSLLKVLNSDEQKKH-------QRQNFVYSATLTLVHDLPDHMQKRNVGKRPKFVKQTVDQKIESLIEELGISQ-PKIVDITSSQQTAQTLTESRLLCPI-DHKDYHLYYFIQRHPGRTIVFCNSIDCVKRLATLFGLLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYVHRSGRTARANKHGITVMFMEPGEVKSYVKLYKTLERTEDLPLFPILERFMGAVRERVNLARDLDKEELKLKRVQSERGWMKKHAEEMDMIID 722
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Fly
Match: CG9253 (gene:FBgn0032919 transcript:FBtr0081468) HSP 1 Score: 148.673 bits (374), Expect = 4.771e-38 Identity = 104/334 (31.14%), Postives = 169/334 (50.60%), Query Frame = 1
Query: 484 QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQK 1473
Q + LVLTPTRELA Q+ + + ++ C + GGM Q L ++P I++ TPGR +++ L A K LV+DEADRIL E+ D+ + +P + R+T +FSAT+T VKK +++ +K+ P+ ++ + V QL Q + P + KD L L G + ++F ++ N+ + +L+ LGL+ L+ M Q RL L F S+LI++DVA+RGLDIP +D V++FD+ ++ ++HR GRTARA SG +I ++S ++ + ++ L K
Sbjct: 128 QRYFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKY--LVMDEADRILNMDFEVEL------------DKILKVLP-RERRTFLFSATMT-----KKVKK------------------LQRASLKD-PVKVEVSNKYQTVEQLQQSYLFIPVKY-KDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDIELYQRIEHLLGK 421
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Fly
Match: Rs1 (gene:FBgn0021995 transcript:FBtr0345935) HSP 1 Score: 140.198 bits (352), Expect = 2.529e-34 Identity = 107/318 (33.65%), Postives = 158/318 (49.69%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVA-QLSQWKILCPTQEDKDTRLYWFLKNHQGRT-----IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE 1434
LVL PTREL QV K+ CQFT + V GG+ + QE +L++ P+IV+ TPGR I++ L + + +L++DEADR+L+ E F MK IN K RQT++FSAT++ + VK K + ++ VA L Q I +EDK+ L + RT +VF +K RL +L LG+ L+ ++ Q+ RL+ L+ F + + +LIA+DVAARGLDI + VI+F + T E ++HR GRTARA +G S+ + E
Sbjct: 233 LVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDS--IEVLILDEADRMLD-------EYFAEQMK-----EIINSC-CKTRQTMLFSATMS-----EQVKDLAAVSLD-----------------KPIKVFVNNNQQVAFNLRQEFIRI--REDKEGDREPILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKE 511
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Fly
Match: Rs1 (gene:FBgn0021995 transcript:FBtr0088788) HSP 1 Score: 140.198 bits (352), Expect = 2.529e-34 Identity = 107/318 (33.65%), Postives = 158/318 (49.69%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVA-QLSQWKILCPTQEDKDTRLYWFLKNHQGRT-----IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE 1434
LVL PTREL QV K+ CQFT + V GG+ + QE +L++ P+IV+ TPGR I++ L + + +L++DEADR+L+ E F MK IN K RQT++FSAT++ + VK K + ++ VA L Q I +EDK+ L + RT +VF +K RL +L LG+ L+ ++ Q+ RL+ L+ F + + +LIA+DVAARGLDI + VI+F + T E ++HR GRTARA +G S+ + E
Sbjct: 233 LVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDS--IEVLILDEADRMLD-------EYFAEQMK-----EIINSC-CKTRQTMLFSATMS-----EQVKDLAAVSLD-----------------KPIKVFVNNNQQVAFNLRQEFIRI--REDKEGDREPILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKE 511
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Fly
Match: pit (gene:FBgn0266581 transcript:FBtr0084174) HSP 1 Score: 134.42 bits (337), Expect = 1.345e-32 Identity = 104/353 (29.46%), Postives = 167/353 (47.31%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDT-----TIDVAQLSQWKILCPTQEDKDTRLYWFLK-NHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALN-SGYSIIMLSPNEMG----------QFNKLLFSLQKSESDVKDIQIK 1506
++++PTREL+ Q LK+ + GG + + + L + I+V TPGR +Q+ P L + L L+IDE DRILE G E++ +N + K RQT++FSAT T A + KL +K P+ + T V L Q I+CP+ E + L+ FLK N + + +VF +S SV+ + + L S++ +Q R F E+ +L+ +DVAARGLDIP++D+++ +D ++HR GRTAR SG++++++ P E+G N+ FS QK + DIQ++
Sbjct: 263 IIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQN-SPDFLYKN-LQCLIIDEVDRILEIGFEEELKQIINLLP-------------KRRQTMLFSATQTARIEA-----------------------LSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPS-EKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAAKVPLNEFEFSWQK----IADIQLQ 572
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Zebrafish
Match: ddx24 (DEAD (Asp-Glu-Ala-Asp) box helicase 24 [Source:ZFIN;Acc:ZDB-GENE-100716-4]) HSP 1 Score: 353.214 bits (905), Expect = 4.402e-111 Identity = 226/545 (41.47%), Postives = 328/545 (60.18%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILM-DKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDN-------------CKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIV 1650
+++W++L +PEPVL+A+ GF PT IQ LVLP AIRDR+DILGAA TG+GKTL FGIPMI IL +Q E + ++ + + E E+D D E + + +DDE G E C D+ C+P + GLVLTPTRELA QV H+ QFT ++ + GGM+ ++Q R+L RRPEI++ TPGR W I+++ PH +L LV+DEADR++EKGHFAE+E+ + + T+ +F + RQT VFSATLT VHS + +Q KK + SKL +EK+G+++ P +ID T V L++ +I C T+EDKD LY+FL GR++VFANS ++RL ++L L +P L+A+M QK RLK LE F++ +L+ +DVAARGLDIP + VIH+ V T+ET++HRSGRTARA G S++++SP+++ + ++ +L KSE V ++ K + +E V LA IE + + +W + AE DI +DDE++
Sbjct: 204 VSSWRDLLVPEPVLRALAVLGFSAPTAIQALVLPPAIRDRLDILGAAETGSGKTLCFGIPMIHMILQWREQTEEHSTPERTHTPAQSLYLQEEHGEDDDDDDDDDEKKDDEVIDDDE------GGAEGCSAPPDDPDGQNDPDPASGVCRP---LLGLVLTPTRELAVQVKHHIDAVAQFTGIKTAIVVGGMAPQKQHRVLMRRPEIIIATPGRLWEMIREKHPHLQDLRQLRCLVLDEADRMVEKGHFAELESLLELLNTS---QFSSR-----RQTFVFSATLTLVHSLPSRLQQKKKKQRPAEQRSKLQLLMEKVGVRDKPKVIDLTRKQATVETLTETRISC-TKEDKDLFLYYFLLQFPGRSMVFANSIACIKRLYALLHLLDCTPLMLHANMHQKQRLKNLERFAENTRCVLLTTDVAARGLDIPDVQHVIHYQVPRTSETYVHRSGRTARATREGLSLLLISPDDLLNYRRICRTLDKSEELPVFPVESKCMAAVKERVDLAHRIEKMEYFHSRQTQHNSWVRQAAEAMDIDVDDELL 730
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Zebrafish
Match: ddx24 (DEAD (Asp-Glu-Ala-Asp) box helicase 24 [Source:ZFIN;Acc:ZDB-GENE-100716-4]) HSP 1 Score: 354.369 bits (908), Expect = 6.649e-111 Identity = 226/545 (41.47%), Postives = 328/545 (60.18%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILM-DKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDN-------------CKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIV 1650
+++W++L +PEPVL+A+ GF PT IQ LVLP AIRDR+DILGAA TG+GKTL FGIPMI IL +Q E + ++ + + E E+D D E + + +DDE G E C D+ C+P + GLVLTPTRELA QV H+ QFT ++ + GGM+ ++Q R+L RRPEI++ TPGR W I+++ PH +L LV+DEADR++EKGHFAE+E+ + + T+ +F + RQT VFSATLT VHS + +Q KK + SKL +EK+G+++ P +ID T V L++ +I C T+EDKD LY+FL GR++VFANS ++RL ++L L +P L+A+M QK RLK LE F++ +L+ +DVAARGLDIP + VIH+ V T+ET++HRSGRTARA G S++++SP+++ + ++ +L KSE V ++ K + +E V LA IE + + +W + AE DI +DDE++
Sbjct: 233 VSSWRDLLVPEPVLRALAVLGFSAPTAIQALVLPPAIRDRLDILGAAETGSGKTLCFGIPMIHMILQWREQTEEHSTPERTHTPAQSLYLQEEHGEDDDDDDDDDEKKDDEVIDDDE------GGAEGCSAPPDDPDGQNDPDPASGVCRP---LLGLVLTPTRELAVQVKHHIDAVAQFTGIKTAIVVGGMAPQKQHRVLMRRPEIIIATPGRLWEMIREKHPHLQDLRQLRCLVLDEADRMVEKGHFAELESLLELLNTS---QFSSR-----RQTFVFSATLTLVHSLPSRLQQKKKKQRPAEQRSKLQLLMEKVGVRDKPKVIDLTRKQATVETLTETRISC-TKEDKDLFLYYFLLQFPGRSMVFANSIACIKRLYALLHLLDCTPLMLHANMHQKQRLKNLERFAENTRCVLLTTDVAARGLDIPDVQHVIHYQVPRTSETYVHRSGRTARATREGLSLLLISPDDLLNYRRICRTLDKSEELPVFPVESKCMAAVKERVDLAHRIEKMEYFHSRQTQHNSWVRQAAEAMDIDVDDELL 759
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Zebrafish
Match: ddx49 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]) HSP 1 Score: 147.902 bits (372), Expect = 6.028e-38 Identity = 109/334 (32.63%), Postives = 171/334 (51.20%), Query Frame = 1
Query: 478 PYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVA---QLSQWKILCPTQEDKDTRLYWFLKNHQGR-----TIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
PY ++ LVLTPTRELA Q+ + + + L+ C I GGM Q L ++P +VV TPGR I+ D ++ +++ L++DEADR+LE+G +F T + ++ VP+K RQTL+FSATLT D +++ ++ + M P + DV +L Q IL P ++ KD L ++ Q I+F N+ S + LT +L+ SL++ M+Q+ R L F +LIA+DVAARGLDIP + VI+ + + ++HR GRTARA +G SI +++ ++ N +
Sbjct: 68 PY-GVFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSKKPHVVVATPGRLADHIRSSD--TINLNRIQFLIMDEADRLLEQG----CTDF-----TKDLEVILSAVPVK-RQTLLFSATLT-----DTLQQ------------------LQSIAMNR-PFFWEHKSDVQTVKELDQRFILTP-EKVKDAYLVHLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKSNVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLINAI 363
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Zebrafish
Match: ddx27 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]) HSP 1 Score: 133.265 bits (334), Expect = 6.466e-32 Identity = 95/317 (29.97%), Postives = 159/317 (50.16%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE-CPMIIDTTIDVAQL--SQWKILCPTQE-DKDTRLYWFL-KNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE 1434
LVL PTREL QV ++ QFT + C GG+ + QE L+ P++++ TPGR + + LS ++ IL++DEADR+L+ E F MK I + RQT++FSAT++ + VK + + +K+ + +++ DVA ++ + P +E D++ + L + Q ++F +K R+ +L +GL L+ ++ Q RL+ L F + +L+A+DVAARGLDI + VI+F + +T + ++HR GRTARA G S+ ++ E
Sbjct: 276 LVLVPTRELGIQVHTVARQLAQFTTISTCLAVGGLDLKSQEAALRAGPDVLIATPGRLIDHLHNTPSFELS--QIEILILDEADRMLD-------EYFEEQMKE------IIRMCAYQRQTMLFSATMS-----EEVKD------------------LASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPNKEGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSVSLVGETE 554
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Zebrafish
Match: ddx18 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-030131-9685]) HSP 1 Score: 131.724 bits (330), Expect = 1.477e-31 Identity = 94/321 (29.28%), Postives = 154/321 (47.98%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDT-----TIDVAQLSQWKILCPTQEDKDTRLYWFLK-NHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNS-GYSIIMLSPNEMG 1440
+VL+PTRELA Q LK+ I GG + + + L I+V TPGR +Q+ L L+IDEADRILE G E++ + + K RQ+++FSAT T + + ++ +K+ P+ + T V L Q ++CP+ E + L+ FLK N + + +VF +S SV+ +L + L +++ +Q R F ++ +L+ +DVAARGLDIP +D+++ FD + ++HR GRTAR +N G+++++L P E+G
Sbjct: 237 IVLSPTRELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGRLLDHLQNTP--GFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLP-------------KKRQSMLFSATQT-----------------------RKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPS-EKRFLLLFTFLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELG 518
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Xenopus
Match: DDX24 (DEAD-box helicase 24 [Source:NCBI gene;Acc:100490359]) HSP 1 Score: 350.903 bits (899), Expect = 4.436e-110 Identity = 218/529 (41.21%), Postives = 321/529 (60.68%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL-MDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKED-NCKPYQH---------IYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKD--IQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEK 1608
++ WKNLY+P+ VLKA+ GF PT IQ L LP AIRD+MDILGAA TG+GKTLAF IPMI IL K++E + E E+ + +E++ ++ + SE+E + DD ++P + + I + N P + GLV+TPTRELA QV H+ +FT ++ + GGM+ ++Q+RLL RRPEIV+ TPGR W I+++ PH + +L LVIDEADR++EKGH+AE+ + + N RQT VFSATLT +H A Q KK + +S +EK+GMK+ P +ID T V L++ +I C T E+KD LY+FL + GRT+VFANS + ++RL+S+L L +P ++A+M QK RLK LE F++ E+ +L+ +DVAARGLDIP + VIH+ V T+ET++HRSGRTARA + G +++++ PN+M F K+ +L+K+E ++ D ++ K + +E V LAR IE + +W ++
Sbjct: 172 VSAWKNLYVPQVVLKALSYLGFACPTPIQALALPSAIRDKMDILGAAETGSGKTLAFAIPMIHSILEWQKRQEYGAAEGETEEKPTTSDGKNEMDVAEKEEQDMSENEEDVEQVDDNVEPLSAACINVENIDINVNAVPSSKTGTWDKERPLLGLVVTPTRELAVQVKHHIDAVAKFTGIRTAIVVGGMAPQKQQRLLDRRPEIVIATPGRLWELIRERHPHLRNLRQLRCLVIDEADRMVEKGHYAELSQLFELL----SEVHYNS----KRQTFVFSATLTLIHQAPTRLLQKKKYKKIDKDSKLVS-LMEKIGMKDKPKVIDLTRKQATVETLTETRIHCAT-EEKDFYLYYFLLQYPGRTMVFANSIDCIKRLSSLLTILDCNPLPMHANMHQKQRLKNLERFAERESCVLLTTDVAARGLDIPNVQHVIHYQVPRTSETYVHRSGRTARASSDGLTLLLIGPNDMINFKKIFRTLEKNE-ELPDFPVESKCMSGIKERVNLARMIEKMEYFNCKAKQQNSWLQQ 689
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Xenopus
Match: DDX24 (DEAD-box helicase 24 [Source:NCBI gene;Acc:100490359]) HSP 1 Score: 350.903 bits (899), Expect = 7.926e-110 Identity = 218/529 (41.21%), Postives = 321/529 (60.68%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL-MDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKED-NCKPYQH---------IYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKD--IQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEK 1608
++ WKNLY+P+ VLKA+ GF PT IQ L LP AIRD+MDILGAA TG+GKTLAF IPMI IL K++E + E E+ + +E++ ++ + SE+E + DD ++P + + I + N P + GLV+TPTRELA QV H+ +FT ++ + GGM+ ++Q+RLL RRPEIV+ TPGR W I+++ PH + +L LVIDEADR++EKGH+AE+ + + N RQT VFSATLT +H A Q KK + +S +EK+GMK+ P +ID T V L++ +I C T E+KD LY+FL + GRT+VFANS + ++RL+S+L L +P ++A+M QK RLK LE F++ E+ +L+ +DVAARGLDIP + VIH+ V T+ET++HRSGRTARA + G +++++ PN+M F K+ +L+K+E ++ D ++ K + +E V LAR IE + +W ++
Sbjct: 188 VSAWKNLYVPQVVLKALSYLGFACPTPIQALALPSAIRDKMDILGAAETGSGKTLAFAIPMIHSILEWQKRQEYGAAEGETEEKPTTSDGKNEMDVAEKEEQDMSENEEDVEQVDDNVEPLSAACINVENIDINVNAVPSSKTGTWDKERPLLGLVVTPTRELAVQVKHHIDAVAKFTGIRTAIVVGGMAPQKQQRLLDRRPEIVIATPGRLWELIRERHPHLRNLRQLRCLVIDEADRMVEKGHYAELSQLFELL----SEVHYNS----KRQTFVFSATLTLIHQAPTRLLQKKKYKKIDKDSKLVS-LMEKIGMKDKPKVIDLTRKQATVETLTETRIHCAT-EEKDFYLYYFLLQYPGRTMVFANSIDCIKRLSSLLTILDCNPLPMHANMHQKQRLKNLERFAERESCVLLTTDVAARGLDIPNVQHVIHYQVPRTSETYVHRSGRTARASSDGLTLLLIGPNDMINFKKIFRTLEKNE-ELPDFPVESKCMSGIKERVNLARMIEKMEYFNCKAKQQNSWLQQ 705
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Xenopus
Match: DDX24 (DEAD-box helicase 24 [Source:NCBI gene;Acc:100490359]) HSP 1 Score: 348.591 bits (893), Expect = 2.953e-109 Identity = 216/518 (41.70%), Postives = 316/518 (61.00%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKD--IQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEK 1608
++ WKNLY+P+ VLKA+ GF PT IQ L LP AIRD+MDILGAA TG+GKTLAF IPMI IL E ++ E E E + + ++ D++ E E + + N++++ TG D +P + GLV+TPTRELA QV H+ +FT ++ + GGM+ ++Q+RLL RRPEIV+ TPGR W I+++ PH + +L LVIDEADR++EKGH+AE+ + + N RQT VFSATLT +H A Q KK + +S +EK+GMK+ P +ID T V L++ +I C T E+KD LY+FL + GRT+VFANS + ++RL+S+L L +P ++A+M QK RLK LE F++ E+ +L+ +DVAARGLDIP + VIH+ V T+ET++HRSGRTARA + G +++++ PN+M F K+ +L+K+E ++ D ++ K + +E V LAR IE + +W ++
Sbjct: 188 VSAWKNLYVPQVVLKALSYLGFACPTPIQALALPSAIRDKMDILGAAETGSGKTLAFAIPMIHSIL-----EWQKRQEYGAAEGETEEKPTTSDGKNEMDVAEKE-EQDMSENEEDVDK---TGTW------DKERP---LLGLVVTPTRELAVQVKHHIDAVAKFTGIRTAIVVGGMAPQKQQRLLDRRPEIVIATPGRLWELIRERHPHLRNLRQLRCLVIDEADRMVEKGHYAELSQLFELL----SEVHYNS----KRQTFVFSATLTLIHQAPTRLLQKKKYKKIDKDSKLVS-LMEKIGMKDKPKVIDLTRKQATVETLTETRIHCAT-EEKDFYLYYFLLQYPGRTMVFANSIDCIKRLSSLLTILDCNPLPMHANMHQKQRLKNLERFAERESCVLLTTDVAARGLDIPNVQHVIHYQVPRTSETYVHRSGRTARASSDGLTLLLIGPNDMINFKKIFRTLEKNE-ELPDFPVESKCMSGIKERVNLARMIEKMEYFNCKAKQQNSWLQQ 676
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Xenopus
Match: mki67 (marker of proliferation Ki-67 [Source:Xenbase;Acc:XB-GENE-6457930]) HSP 1 Score: 154.451 bits (389), Expect = 3.941e-40 Identity = 103/328 (31.40%), Postives = 169/328 (51.52%), Query Frame = 1
Query: 484 QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE---CPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
Q +Y LVLTPTRELA Q+++ + ++ I GG+ Q L ++P +V+ TPGR +++ L A L LV+DEADRIL EV D+ + +P + R+T +FSAT+T V+K +++ +K+ C + V +L Q+ + P++ KD+ L + L G + ++F ++ N+ +R+ +L+ LG + L+ M Q RL L F S+L+A+DVA+RGLDIP +D VI+FD+ ++ ++HR GRTARA SG +I +S ++ F ++
Sbjct: 86 QRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRA--LKYLVMDEADRILNMDFETEV------------DKILKVIP-RDRKTFLFSATMT-----KKVQK------------------LQRAALKDPVKCA-VSSKYQTVEKLQQFYVFIPSK-FKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVSQYDVELFQRI 373
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Xenopus
Match: mki67 (marker of proliferation Ki-67 [Source:Xenbase;Acc:XB-GENE-6457930]) HSP 1 Score: 153.68 bits (387), Expect = 4.158e-40 Identity = 103/328 (31.40%), Postives = 169/328 (51.52%), Query Frame = 1
Query: 484 QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE---CPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
Q +Y LVLTPTRELA Q+++ + ++ I GG+ Q L ++P +V+ TPGR +++ L A L LV+DEADRIL EV D+ + +P + R+T +FSAT+T V+K +++ +K+ C + V +L Q+ + P++ KD+ L + L G + ++F ++ N+ +R+ +L+ LG + L+ M Q RL L F S+L+A+DVA+RGLDIP +D VI+FD+ ++ ++HR GRTARA SG +I +S ++ F ++
Sbjct: 63 QRLYALVLTPTRELAFQISEQFEALGSTIGVKSAVIVGGIDMMSQSLALAKKPHVVIATPGRLIDHLENTKGFNLRA--LKYLVMDEADRILNMDFETEV------------DKILKVIP-RDRKTFLFSATMT-----KKVQK------------------LQRAALKDPVKCA-VSSKYQTVEKLQQFYVFIPSK-FKDSYLVYILNELAGNSFMIFCSTCNNTQRVALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKAKSRSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKAITFVSQYDVELFQRI 350
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Mouse
Match: Ddx24 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Source:MGI Symbol;Acc:MGI:1351337]) HSP 1 Score: 298.516 bits (763), Expect = 3.524e-90 Identity = 172/430 (40.00%), Postives = 259/430 (60.23%), Query Frame = 1
Query: 358 DQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNC--------KPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEK 1608
D PS E + +E E F + ++K++ C P + + GLVLTPTRELA QV H+ +FT + + GGMS ++Q+R+L R PEIV+ TPGR W ++++ PH + +L LVIDEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK K+ K KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ ++ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA + G S++++ P ++ F K+ +LQK E + +Q K ++ +E ++LAR+IE + + +W E+
Sbjct: 336 DDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLE---------MLNDSQYNPSRQTLVFSATLTLVHQAPA-RILHKKHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDE-KDLYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQFARLQDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIHRSGRTARAASEGLSLMLIGPEDVINFKKIYKTLQKDEDIPLFPVQSKYMDVVKERIRLARQIEKAEYRNFQACLHNSWIEQ 754 HSP 2 Score: 64.3142 bits (155), Expect = 4.048e-10 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL 267
++ W++L++P+ VL+A+ GF PT IQ L L AIRD++DILGAA TG+GKTLAF IPMI +L
Sbjct: 192 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHSVL 257
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Mouse
Match: Ddx24 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Source:MGI Symbol;Acc:MGI:1351337]) HSP 1 Score: 299.286 bits (765), Expect = 5.973e-90 Identity = 172/430 (40.00%), Postives = 259/430 (60.23%), Query Frame = 1
Query: 358 DQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNC--------KPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEK 1608
D PS E + +E E F + ++K++ C P + + GLVLTPTRELA QV H+ +FT + + GGMS ++Q+R+L R PEIV+ TPGR W ++++ PH + +L LVIDEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK K+ K KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ ++ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA + G S++++ P ++ F K+ +LQK E + +Q K ++ +E ++LAR+IE + + +W E+
Sbjct: 336 DDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLE---------MLNDSQYNPSRQTLVFSATLTLVHQAPA-RILHKKHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDE-KDLYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQFARLQDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIHRSGRTARAASEGLSLMLIGPEDVINFKKIYKTLQKDEDIPLFPVQSKYMDVVKERIRLARQIEKAEYRNFQACLHNSWIEQ 754 HSP 2 Score: 64.3142 bits (155), Expect = 4.230e-10 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL 267
++ W++L++P+ VL+A+ GF PT IQ L L AIRD++DILGAA TG+GKTLAF IPMI +L
Sbjct: 192 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHSVL 257
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Mouse
Match: Ddx24 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Source:MGI Symbol;Acc:MGI:1351337]) HSP 1 Score: 298.516 bits (763), Expect = 3.078e-89 Identity = 172/430 (40.00%), Postives = 259/430 (60.23%), Query Frame = 1
Query: 358 DQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNC--------KPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEK 1608
D PS E + +E E F + ++K++ C P + + GLVLTPTRELA QV H+ +FT + + GGMS ++Q+R+L R PEIV+ TPGR W ++++ PH + +L LVIDEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK K+ K KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ ++ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA + G S++++ P ++ F K+ +LQK E + +Q K ++ +E ++LAR+IE + + +W E+
Sbjct: 382 DDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLE---------MLNDSQYNPSRQTLVFSATLTLVHQAPA-RILHKKHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDE-KDLYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQFARLQDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIHRSGRTARAASEGLSLMLIGPEDVINFKKIYKTLQKDEDIPLFPVQSKYMDVVKERIRLARQIEKAEYRNFQACLHNSWIEQ 800 HSP 2 Score: 63.929 bits (154), Expect = 4.872e-10 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL 267
++ W++L++P+ VL+A+ GF PT IQ L L AIRD++DILGAA TG+GKTLAF IPMI +L
Sbjct: 238 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHSVL 303
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Mouse
Match: Ddx47 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:MGI Symbol;Acc:MGI:1915005]) HSP 1 Score: 154.836 bits (390), Expect = 2.573e-40 Identity = 104/330 (31.52%), Postives = 166/330 (50.30%), Query Frame = 1
Query: 484 QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID-----VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
Q ++ LVLTPTRELA Q+++ + +Q I GG+ + Q L ++P IV+ TPGR +++ L A L LV+DEADRIL EV D+ + +P + R+T +FSAT+T KK V+KL + + V +L Q+ + P++ KDT L + L G + ++F ++ N+ +R +L+ LG + L+ M Q RL L F S+L+A+DVA+RGLDIP +D V++FD+ ++ ++HR GRTARA SG +I ++ ++ F ++
Sbjct: 91 QRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRA--LKYLVMDEADRILNMDFETEV------------DKILKVIP-RDRKTFLFSATMT--------KK------------------VQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKF-KDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRI 378
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Mouse
Match: Ddx49 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:MGI Symbol;Acc:MGI:2136689]) HSP 1 Score: 142.51 bits (358), Expect = 6.819e-36 Identity = 106/324 (32.72%), Postives = 164/324 (50.62%), Query Frame = 1
Query: 478 PYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIID---TTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGR-----TIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLS 1425
PY I+ LVLTPTRELA Q+ + + + L+ C I GGM Q L R+P +V+ TPGR ++ + + K+ LV+DEADR+LE+G +F ++T + VP + RQTL+FSATLT D +K+ ++ L E P + T V QL Q +L P ++ KD L ++ Q + I+F N+ + + L +L+ +L++ M+QK R L F + +LIA+DVA+RGLDIP + VI+ + + ++HR GRTARA G +I +++
Sbjct: 68 PY-GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSN--TFNMKKIQFLVMDEADRLLEQG----CTDFTTDLET-----ILAAVPAR-RQTLLFSATLT-----DTLKE------------------LQGLATNE-PFFWEAQATVRTVEQLDQRYLLVP-EKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT 353
BLAST of ATP-dependent RNA helicase DDX24 vs. UniProt/SwissProt
Match: sp|Q9GZR7|DDX24_HUMAN (ATP-dependent RNA helicase DDX24 OS=Homo sapiens OX=9606 GN=DDX24 PE=1 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 1.582e-92 Identity = 176/432 (40.74%), Postives = 274/432 (63.43%), Query Frame = 1
Query: 460 KEDNCKPY--QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYL 1734
K CK Y + + GLVLTPTRELA QV H+ +FT ++ + GGMS ++Q+R+L RRPEIVV TPGR W I+++ H + +L LV+DEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK T K+ K +KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ E+ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA N G S++++ P ++ F K+ +L+K E + +Q K ++ +E ++LAR+IE + + +W E+ A +I+L++++ + A +++ + +K+ + L ++++L
Sbjct: 376 KSATCKAYPKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLE---------MLNDSQYNPKRQTLVFSATLTLVHQAPA-RILHKKHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDE-KDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIRLARQIEKSEYRNFQACLHNSWIEQAAAALEIELEEDMYKGGKA-DQQEERRRQKQMKVLKKELRHL 795 HSP 2 Score: 68.1662 bits (165), Expect = 1.544e-10 Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL 267
++ WK+L++P PVL+A+ GF PT IQ L L AIRD++DILGAA TG+GKTLAF IPMI +L
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHAVL 256
BLAST of ATP-dependent RNA helicase DDX24 vs. UniProt/SwissProt
Match: sp|Q5RDL2|DDX24_PONAB (ATP-dependent RNA helicase DDX24 OS=Pongo abelii OX=9601 GN=DDX24 PE=2 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 2.916e-92 Identity = 176/432 (40.74%), Postives = 274/432 (63.43%), Query Frame = 1
Query: 460 KEDNCKPY--QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYL 1734
K CK Y + + GLVLTPTRELA QV H+ +FT ++ + GGMS ++Q+R+L RRPEIVV TPGR W I+++ H + +L LV+DEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK T K+ K +KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ E+ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA N G S++++ P ++ F K+ +L+K E + +Q K ++ +E ++LAR+IE + + +W E+ A +I+L++++ + A +++ + +K+ + L ++++L
Sbjct: 376 KSATCKTYPKRPLLGLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLE---------MLNDSQYNPKRQTLVFSATLTLVHQAPA-RILHKKHTKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDE-KDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIRLARQIEKSEYRNFQACLHNSWIEQAAAALEIELEEDMYKGGKA-DQQEERRRQKQMKVLKKELRHL 795 HSP 2 Score: 68.1662 bits (165), Expect = 1.849e-10 Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL 267
++ WK+L++P PVL+A+ GF PT IQ L L AIRD++DILGAA TG+GKTLAF IPMI +L
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHAVL 256
BLAST of ATP-dependent RNA helicase DDX24 vs. UniProt/SwissProt
Match: sp|Q9ESV0|DDX24_MOUSE (ATP-dependent RNA helicase DDX24 OS=Mus musculus OX=10090 GN=Ddx24 PE=1 SV=2) HSP 1 Score: 299.286 bits (765), Expect = 4.178e-89 Identity = 172/430 (40.00%), Postives = 259/430 (60.23%), Query Frame = 1
Query: 358 DQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNC--------KPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEK 1608
D PS E + +E E F + ++K++ C P + + GLVLTPTRELA QV H+ +FT + + GGMS ++Q+R+L R PEIV+ TPGR W ++++ PH + +L LVIDEADR++EKGHFAE+ + +N P RQTLVFSATLT VH A A + KK K+ K KL ++K+GM+ P +ID T + V L++ KI C T E KD LY+FL + GR++VFANS + ++RL+ +L+ L + P +L+A M QK RL+ LE F++ ++ +L+A+DVAARGLDIP++ VIH+ V T+E ++HRSGRTARA + G S++++ P ++ F K+ +LQK E + +Q K ++ +E ++LAR+IE + + +W E+
Sbjct: 336 DDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLE---------MLNDSQYNPSRQTLVFSATLTLVHQAPA-RILHKKHVKKMDKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDE-KDLYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQFARLQDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIHRSGRTARAASEGLSLMLIGPEDVINFKKIYKTLQKDEDIPLFPVQSKYMDVVKERIRLARQIEKAEYRNFQACLHNSWIEQ 754 HSP 2 Score: 64.3142 bits (155), Expect = 2.959e-9 Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL 267
++ W++L++P+ VL+A+ GF PT IQ L L AIRD++DILGAA TG+GKTLAF IPMI +L
Sbjct: 192 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHSVL 257
BLAST of ATP-dependent RNA helicase DDX24 vs. UniProt/SwissProt
Match: sp|A3AVH5|RH13_ORYSJ (DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0510400 PE=2 SV=2) HSP 1 Score: 273.478 bits (698), Expect = 9.382e-80 Identity = 191/561 (34.05%), Postives = 295/561 (52.58%), Query Frame = 1
Query: 55 MANDILNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMK-TNAGDRFING-------VP---MKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLG----MKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNH-QGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKK 1680
+ D + W+ L + ++ A+ + GF +PT IQ P A D++GAA TG+GKTLAFG+P++ R+L +++K + + +++ + D + ES L L+LTPTRELA QV DHLK+A +F +QV I GG+S E+QERLLKR+PEIVV TPGR W + + H + LS V+DEADR++E+GHF E+++ + + TN D G VP +K RQT VFSATL SA+ KK + L + S + +E L MK I+D T I +L + I C + +DKD LY+ L H QGRTI+F S ++R L+S+L+ LG++ + +A MQQ+ R+K ++ F ++ENS+L+A+D ARG+D + VIH+ + H+ + ++HRSGRTAR +G SI ++SP + +F L SL K + + + LAR+I+ + N++W ++ AE + L+ E++ K+
Sbjct: 192 LGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQ----------------DENSRESPLR---------------------------------ALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLAL--SANFRKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIEC-SDDDKDAYLYYILSVHGQGRTIIFCTSIAALRHLSSILRVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSKENLQQFPVDHAYMPAVMNRLTLARQIDKITRKNSQENANKSWLQRNAESMGLLLETSDSEEERVQGHKQ 700
BLAST of ATP-dependent RNA helicase DDX24 vs. UniProt/SwissProt
Match: sp|A2XVF7|RH13_ORYSI (DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_016050 PE=3 SV=2) HSP 1 Score: 273.478 bits (698), Expect = 9.382e-80 Identity = 191/561 (34.05%), Postives = 295/561 (52.58%), Query Frame = 1
Query: 55 MANDILNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMK-TNAGDRFING-------VP---MKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLG----MKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNH-QGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKK 1680
+ D + W+ L + ++ A+ + GF +PT IQ P A D++GAA TG+GKTLAFG+P++ R+L +++K + + +++ + D + ES L L+LTPTRELA QV DHLK+A +F +QV I GG+S E+QERLLKR+PEIVV TPGR W + + H + LS V+DEADR++E+GHF E+++ + + TN D G VP +K RQT VFSATL SA+ KK + L + S + +E L MK I+D T I +L + I C + +DKD LY+ L H QGRTI+F S ++R L+S+L+ LG++ + +A MQQ+ R+K ++ F ++ENS+L+A+D ARG+D + VIH+ + H+ + ++HRSGRTAR +G SI ++SP + +F L SL K + + + LAR+I+ + N++W ++ AE + L+ E++ K+
Sbjct: 192 LGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQ----------------DENSRESPLR---------------------------------ALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLAL--SANFRKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIEC-SDDDKDAYLYYILSVHGQGRTIIFCTSIAALRHLSSILRVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSKENLQQFPVDHAYMPAVMNRLTLARQIDKITRKNSQENANKSWLQRNAESMGLLLETSDSEEERVQGHKQ 700
BLAST of ATP-dependent RNA helicase DDX24 vs. TrEMBL
Match: A0A4W6FC87 (DEAD (Asp-Glu-Ala-Asp) box helicase 24 OS=Lates calcarifer OX=8187 PE=3 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 1.169e-110 Identity = 230/549 (41.89%), Postives = 329/549 (59.93%), Query Frame = 1
Query: 61 NDILNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEF--------AWNDDEIKPELFTGVEMCRIKEDNCKPY------------QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIES-QSHVTKTVVNNRNWFEKMAEKADI 1629
N ++ WK+L++P VLKA+ GF PT IQ L LP AIRDRMDILGAA TG+GKTLAFGIPMI IL K+ S+ +D C+L+ +E+E A DDE + E V++ E + P Q + GLVLTPTRELA QV H+ +FTD++ + GGM+ ++Q R+LKRRP+I++ TPGR W I+++ PH L+ +L LVIDEADR++E+GHFAE+E+ + +N V P RQT VFSATLT HS + ++K L + +KL +EK+G+K P IID T V L++ +I C +E+KD LY+FL + GRT+VFANS + ++RL S+L L +P L+A+M QK RLK LE F++ E+ +L+ +DVAARGLDIP + VIH+ V T+ET++HRSGRTARA G S++++ P++M F K+ +L K E + I+ K +E +E V LAR+IE + H ++ +N +W ++ AE ++
Sbjct: 133 NTDVSAWKDLFVPFAVLKALSSLGFSSPTPIQALALPPAIRDRMDILGAAETGSGKTLAFGIPMIHTILEWKK-------------------GSDKPVSDNCELT---TEVERGPGGQCGDASEDDEGEDERLGCVQVIENAEFDFGPAAEAEEESAGGQNQPLLGLVLTPTRELAVQVKHHIDAVAKFTDIKTAIVVGGMAQQKQRRMLKRRPQIIIATPGRLWDLIKERHPHLLNLRQLRCLVIDEADRMVERGHFAELESLLE---------MLNTVHFNPTRQTFVFSATLTMAHSLPT--RLLQKKKKNLDQRNKLEILMEKVGIKSKPKIIDLTRKEATVETLTETRIHC-QKEEKDFYLYYFLLQYPGRTMVFANSIDCIKRLNSLLVILDCTPLPLHANMHQKQRLKNLERFAERESCVLLTTDVAARGLDIPNVQHVIHYQVPRTSETYVHRSGRTARATKEGLSLLLIGPDDMMNFRKIYKTLGKDEELPMFPIETKCMEAIKERVNLARKIEKIEFHNSREKQHN-SWLKQAAEALEV 646
BLAST of ATP-dependent RNA helicase DDX24 vs. TrEMBL
Match: A0A0L8IDB5 (Uncharacterized protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22015589mg PE=3 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 2.938e-110 Identity = 222/552 (40.22%), Postives = 323/552 (58.51%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDE----------------------IKPELFTGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIID---TTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKN--IEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDE 1644
+ W +L +PE VL+AI ++GF +PT IQ L AI + DI+GAAATG+GKTLAFGIP++ I+ D++ I K E +E + S + S E+E ND++ + +F E +I ED+ + L+LTPTRELA QV +HL ++T ++V AI GGMS +RQER+LK++P I+V TPGR W + ++P+ L+ + LVIDEADR++EKGHF E++ ++ + R + + K RQT +FSATLT H K K + LT K+ + K+G+K+ ++D T +LS+ K+LC +E KD LY+FLK H GRT+VF NSK+ +RRL S+ L P L++DM QK RLK LE FS N+LL+A+D+AARGLDIP+ID VIHF V HT E ++HRSGRTARA G +++++SP E + K+L+SL +++ D + N I ++LA +I+++ H + NWF K AE+ DI+LD+E
Sbjct: 18 MGAWAHLPVPELVLQAIAEQGFTQPTPIQNECLIPAIEYKQDIIGAAATGSGKTLAFGIPILYNIMEDEK--IKASKSEKLETDNENNESSLAPGKEDEGKSSDENEALETDNDNQNVEINVTATNRELLEDEVEDDDDEDSVFKKFEESQIPEDDG-----LKALILTPTRELAVQVKNHLVAVAKYTKIKVVAIIGGMSEQRQERILKKQPHIIVATPGRLWELYEKRNPYILTVKNIQYLVIDEADRMVEKGHFEELQKLLSML------RHFSKMTQKRRQTFLFSATLTLAHIGPQRKLSRKFQANLLTTEGKIRMMMYKMGLKKGAKMVDLTEKTRTAEKLSEAKVLC-EREKKDVYLYYFLKQHLGRTLVFCNSKDCIRRLVSIFTLLECHPLPLHSDMHQKQRLKNLERFSSNPNALLLATDIAARGLDIPKIDHVIHFQVPHTVENYIHRSGRTARASQEGLTVLLISPEEQKGYRKILYSLNRTK-DFDQFPVDNSYIPAINARMQLALKIDTEEHRFDKKKHENNWFRKTAEEMDIELDEE 554
BLAST of ATP-dependent RNA helicase DDX24 vs. TrEMBL
Match: A0A3Q1CQA7 (DEAD (Asp-Glu-Ala-Asp) box helicase 24 OS=Amphiprion ocellaris OX=80972 PE=4 SV=1) HSP 1 Score: 361.303 bits (926), Expect = 9.256e-110 Identity = 234/554 (42.24%), Postives = 335/554 (60.47%), Query Frame = 1
Query: 61 NDILNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDK---QKEIDIYKDXXXXXXXXX--XXXXXXXXXDQCD-LSPSESELEFAWNDDEIKPE---------------LFTGVEMCRIKEDNC--KPY----QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADI 1629
N ++ WK+L++P PVL A+ GF PT IQ LVLP AIRDRMDILGAA TG+GKTLAFGIPMI IL K ++ +D + + + ++D E DQ D + SE E E A +D+IK + L V E N KP Q + GLVLTPTRELA QV H+ +FTD++ + GGM+ ++Q R+LKRRPEI++ TPGR W I+++ PH L+ +L LVIDEADR++E+GHFAE+E+ + + T N RQT VFSATLT HS + ++K L K SKL +EK+G+K P +ID T V L++ +I C +++KD LY+FL + GRT+VFANS + ++RL ++L L ++P L+A+M QK RLK LE F++ E+ +L+ +DVAARGLDIP + VIH+ V T+ET++HRSGRTARA G S++++ P++M F K+ +L K E + I+ K ++ +E V LAR+IE+ + + +WF++ AE ++
Sbjct: 240 NTDVSAWKDLFVPSPVLNALSSLGFGSPTPIQALVLPPAIRDRMDILGAAETGSGKTLAFGIPMIHTILEWKNSPEQTVDENTEPPAKVASLYLPDVDEATAEEDQEDNVEASEEEDEGA--EDQIKEDSDKDGSAREETAEDDLLGCVPQIETAEFNSDEKPAGGQNQPLLGLVLTPTRELAVQVKHHIDAVAKFTDIKTAIVVGGMAQQKQRRMLKRRPEIIIATPGRLWDLIKERHPHLLNLRQLKCLVIDEADRMVERGHFAELESLLEMLSTT----HFNPT----RQTFVFSATLTMAHSLPT--RLLQKKKKTLDKRSKLEILMEKVGIKSKPKVIDLTRKEATVETLTETQIHC-QKDEKDFYLYYFLLQYPGRTMVFANSIDCIKRLNTLLVILDITPLPLHANMHQKQRLKNLERFAERESCVLLTTDVAARGLDIPNVQHVIHYQVPRTSETYVHRSGRTARATKEGLSLLLIGPDDMMNFKKIYKTLGKDEELPMFPIETKCMDAIKERVNLARKIENFEYHNSREKQHNSWFKQAAEALEV 780
BLAST of ATP-dependent RNA helicase DDX24 vs. TrEMBL
Match: G1KHY9 (DEAD-box helicase 24 OS=Anolis carolinensis OX=28377 GN=DDX24 PE=4 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 1.631e-109 Identity = 230/577 (39.86%), Postives = 339/577 (58.75%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL-------MDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMC-RIKEDNCKPYQH--------IYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKL-DDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYL 1734
++ WK L++P+PVL+A+ + GF PT IQ L LP AIRD MD+LGAA TG+GKTLAF IPMI IL + K +I + + E+ E D LS +E+ + + + V +C + ED P + GLVLTPTRELA QV H+ ++T ++ + GGM+ ++Q+R+LKR+PEIV+ TPGR W IQ++ PH S +L LVIDEADR++EKGHF E+ + +N P RQT VFSATLT +H A A Q KK ++ K +KL ++K+GMK P +ID T V L++ +I C T E+KD LY+FL + GRT+VFANS + ++RLT++L L +P L+A+M QK RLK LE F++ ++ L+ +DVAARGLDIP + VIH+ V T+E ++HRSGRTARA N G S++++ P++M F ++ +L+KSE ++ K + +E V LAR+IE + + +W ++ AE + L DDE++ K PS+++ E +K + + +K+L
Sbjct: 189 ISAWKGLFVPKPVLQALSELGFSAPTPIQALALPSAIRDSMDVLGAAETGSGKTLAFAIPMIHSILQWYKSRGLPKGSKIQL----EDGGDSEEELSKEEASEDIGGLSSAEANCAAISSVESL-------VTLCEKASEDGDHPKHDTVGERSNPLLGLVLTPTRELAVQVKHHIDAVTRYTGIKTANLVGGMAPQKQQRILKRKPEIVIATPGRLWELIQEKQPHLSSLKQLRCLVIDEADRMVEKGHFLELSQLLE---------MLNSSQYNPKRQTFVFSATLTLIHQAPARVFQ-KKNAIRIDKKTKLELLMQKVGMKSKPKVIDLTRKEATVETLTETRIHCDT-EEKDYFLYYFLLQYPGRTMVFANSIDCIKRLTALLTILDCNPLPLHANMHQKQRLKSLERFAERNSATLLTTDVAARGLDIPHVQHVIHYQVPRTSELYVHRSGRTARAANEGLSLLLIGPSDMMNFKRIYKTLEKSEELPFFPVETKCMTAIKERVNLARQIEKVEYFNSRAKQHNSWLQQAAEALERDLDDDELIGGK--PSEQEESEKQKMLKGMKKHLKHL 741
BLAST of ATP-dependent RNA helicase DDX24 vs. TrEMBL
Match: A0A1A8FBC7 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 OS=Nothobranchius korthausae OX=1143690 GN=DDX24 PE=3 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 4.167e-109 Identity = 222/537 (41.34%), Postives = 319/537 (59.40%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQC-----DLSPSESELE---FAWNDDEIKPELFTGVEMCR-----IKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVK-DIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADI 1629
++ WK+L++P VLKA+ GF PT IQ L LP AIRDRMDILGAA TG+GKTLAFGIPMI IL K +D + + + + D E +L+ A ++D + E V++ +E + + GLVLTPTRELA QV H+ +FTD++ + GGMS +Q RLLKRRPEI++ TPGR W I+++ PH ++ +L LVIDEADR++E+GHFAE+EN + + T + RQT VFSATLT HS + + ++K +L SKL +EK+G+K P ++D T V L++ +I C +++KD LY+FL H GRT+VFANS + ++RLTS+L L SP L+A+M QK RLK LE F++ +N +L+ +DVAARGLDIP + V H+ V T+ET++HRSGRTARA G S +++ P++M F K+ +L K E + ++IK +E +E V LAR IE + + +WF++ A ++
Sbjct: 213 VSAWKDLFVPPLVLKALSSLGFSSPTPIQALALPSAIRDRMDILGAAETGSGKTLAFGIPMIHTILEWKSGTKRTTEDTGPASTVESLRLPSEDVPTESPNQDSDEDSEEGDLDQTLEASDEDGDENEQLGCVKVIDKVEFDFEEKTDSQSRPLLGLVLTPTRELAVQVKHHIDAITKFTDIKTVVVVGGMSQPKQRRLLKRRPEILIATPGRLWDLIKERHPHLVNLRQLKCLVIDEADRMVERGHFAELENLLEMLNTTHSN--------PTRQTFVFSATLTMAHSLPS--RLLQKKKRRLDSRSKLEILMEKVGIKSKPKVVDLTRKEATVETLTETQIHC-QKDEKDFYLYYFLLCHPGRTMVFANSIDCIKRLTSLLVILDCSPLPLHANMHQKQRLKNLERFAEGKNFVLLTTDVAARGLDIPDVQHVFHYQVPRTSETYVHRSGRTARATKEGLSFLLIGPDDMMNFRKIYKTLGKDEELPEFPVEIKCMEAVKERVNLARSIEKIEYYNSREKQHNSWFKRAAAALEV 738
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Cavefish
Match: ddx24 (DEAD-box helicase 24 [Source:NCBI gene;Acc:103042633]) HSP 1 Score: 315.849 bits (808), Expect = 2.853e-96 Identity = 176/392 (44.90%), Postives = 251/392 (64.03%), Query Frame = 1
Query: 490 IYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSES-DVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIV 1650
+ GLVLTPTRELA QV H+ QFT ++ + GGM+ ++Q+R+LKRRPEIV+ TPGR W IQD+ PH + +L LVIDEADR++EKGHFAE+E + + T+ P RQT VFSATLT VHS + + +K +L + SKL +EK+G+K P IID + V L++ KI C +E+KD LY+FL + GRT+VFANS + ++RLTS+L L +P L+A+M QK RLK LE F++ E+ +L+ +DVAARGLDIP + V+H+ V T+ET++HRSGRTARA G S++++ P++M F K+ +L K E V IQ K + +E V +AR IE + + +W + AE+ DI +DD+++
Sbjct: 399 LLGLVLTPTRELAVQVQHHIDAVAQFTGIKTAILVGGMAPQKQDRVLKRRPEIVIATPGRLWEMIQDRHPHLRNLRQLRCLVIDEADRMVEKGHFAELEKLLEMLSTSQ---------FNPKRQTFVFSATLTMVHSLPS--RLARKKGKQLEQRSKLELLMEKVGIKNKPKIIDLSRKEATVETLTETKIHC-EKEEKDFYLYYFLLQYPGRTMVFANSIDCIKRLTSLLTILDCNPLPLHANMHQKQRLKNLERFAERESCVLLTTDVAARGLDIPDVQHVLHYQVPRTSETYVHRSGRTARAAKEGLSLLLIGPDDMINFKKIYKTLGKDEDLPVFPIQNKCMAAIKERVNVARGIEKIEYHNSRAKQHNSWLRQAAEEMDIDVDDDLL 778 HSP 2 Score: 79.337 bits (194), Expect = 6.628e-15 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL 267
++ WK+L++PE VLKA+ K GF PT IQ L LP AIRD MDILGAA TG+GKTL+FGIPMI RIL
Sbjct: 228 VSAWKDLFVPELVLKALSKLGFSAPTPIQALALPPAIRDHMDILGAAETGSGKTLSFGIPMIHRIL 293
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Cavefish
Match: ddx47 (DEAD-box helicase 47 [Source:NCBI gene;Acc:103034543]) HSP 1 Score: 150.984 bits (380), Expect = 4.903e-39 Identity = 104/329 (31.61%), Postives = 168/329 (51.06%), Query Frame = 1
Query: 484 QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE---CPMIID-TTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
Q ++ LVLTPTRELA Q+ + + ++ + GG+ Q +L ++P IV+ TPGR +++ L A L LV+DEADRIL +EV D+ + +P + R T +FSAT+T V+K +++ +K+ C + T+D +L Q+ I P + KD L L G + ++F + N+ +R+ +L+ LG++ L+ M Q RL L F S+L+A+DVA+RGLDIP +D VI+FD+ ++ ++HR GRTARA SG SI ++ ++ F ++
Sbjct: 95 QRLHTLVLTPTRELAFQIAEQFEALGSSIGVKTAVVVGGIDMMSQAMVLAKKPHIVIATPGRLIDHLENTKGFNLRA--LRFLVMDEADRILNMDFESEV------------DKILKVIP-RERHTFLFSATMT-----KKVQK------------------LQRAALKDPVKCAVSTKYATVD--KLQQYYIFIPAKY-KDCYLVSILNELAGNSFMIFCGTCNNAQRVALLLRNLGITAIPLHGQMSQNKRLGSLNKFKAKSRSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRI 382
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Cavefish
Match: ddx49 (DEAD-box helicase 49 [Source:NCBI gene;Acc:103043246]) HSP 1 Score: 142.51 bits (358), Expect = 5.271e-36 Identity = 109/334 (32.63%), Postives = 169/334 (50.60%), Query Frame = 1
Query: 478 PYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVA---QLSQWKILCPTQEDKDTRLYWFLKNHQGR-----TIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
PY I+ LVLTPTRELA Q+ + + + L+ C I GGM Q L ++P IVV TPGR I+ D + ++ L++DEADR+LE+G +F T + ++ VP K RQTL+FSATLT D +++ ++ + M E P + +V +L Q IL P ++ KD L ++ Q ++F N+ + + LT +L+ SL++ M+Q+ R L F +LIA+DVAARGLDIP + VI+ + + ++HR GRTARA +G SI +++ ++ N +
Sbjct: 68 PY-GIFCLVLTPTRELAYQIAEQFRALGKPLGLRDCIIVGGMDMVAQGLELSKKPHIVVATPGRLADHIRSSD--TFNMKRIKFLILDEADRLLEQG----CTDF-----TKDLEVILSVVPAK-RQTLLFSATLT-----DTLQE------------------LKTIAMNE-PFFWENKSEVRTVDELDQRYILTP-EKVKDAYLVHLIQKIQDEHDDWSVMIFTNTCKNCQILTMMLREFKFPAISLHSMMKQRQRFANLAKFKSNVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLVNAI 363
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Cavefish
Match: ddx27 (DEAD-box helicase 27 [Source:NCBI gene;Acc:103032272]) HSP 1 Score: 133.265 bits (334), Expect = 4.882e-32 Identity = 95/317 (29.97%), Postives = 159/317 (50.16%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE-CPMIIDTTIDVAQL--SQWKILCPTQE-DKDTRLYWFL-KNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE 1434
LVL PTREL QV ++ QFT + C GG+ + QE L+ P+I++ TPGR + + LS ++ +L++DEADR+L+ E F MK I + RQT++FSAT++ + VK + + +K+ + +++ DVA ++ + P +E D++ + L + Q ++F +K R+ +L +GL L+ ++ Q RL+ L F + +L+A+DVAARGLDI + VI+F + +T + ++HR GRTARA G S+ ++ E
Sbjct: 241 LVLVPTRELGIQVHSVARQLSQFTTISTCLAVGGLDLKSQEAALRAGPDILIATPGRLIDHLHNTPSFELS--QIEVLILDEADRMLD-------EYFEEQMKE------IIRLCAYQRQTMLFSATMS-----EEVKD------------------LASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPAREGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSVSLVGETE 519
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Cavefish
Match: ddx27 (DEAD-box helicase 27 [Source:NCBI gene;Acc:103032272]) HSP 1 Score: 133.265 bits (334), Expect = 5.745e-32 Identity = 95/317 (29.97%), Postives = 159/317 (50.16%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE-CPMIIDTTIDVAQL--SQWKILCPTQE-DKDTRLYWFL-KNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE 1434
LVL PTREL QV ++ QFT + C GG+ + QE L+ P+I++ TPGR + + LS ++ +L++DEADR+L+ E F MK I + RQT++FSAT++ + VK + + +K+ + +++ DVA ++ + P +E D++ + L + Q ++F +K R+ +L +GL L+ ++ Q RL+ L F + +L+A+DVAARGLDI + VI+F + +T + ++HR GRTARA G S+ ++ E
Sbjct: 271 LVLVPTRELGIQVHSVARQLSQFTTISTCLAVGGLDLKSQEAALRAGPDILIATPGRLIDHLHNTPSFELS--QIEVLILDEADRMLD-------EYFEEQMKE------IIRLCAYQRQTMLFSATMS-----EEVKD------------------LASVSLKQPVRIFVNSNTDVAPYLRQEFVRIRPAREGDREAIVAALLTRTFQDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGRSVSLVGETE 549
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000613.1 (pep scaffold:Pmarinus_7.0:GL494823:624:4032:1 gene:ENSPMAG00000000552.1 transcript:ENSPMAT00000000613.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 166.392 bits (420), Expect = 1.531e-47 Identity = 88/231 (38.10%), Postives = 141/231 (61.04%), Query Frame = 1
Query: 997 PMIIDTTIDVAQ---LSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKS-ESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKK 1677
P ++D T A L + ++ C +DKD LY+FL H GRT+VFANS V+RL +L L L+A+M QK RLK LE F++ ++ +L+ +DVAARGLDIP ++ VIH+ + T+ET++HRSGRTARA G+S+I++ P ++ + K+ +L+ E + N+ + V LAR IE + + ++ +WF+K A+ DI+L+D+++ PS++
Sbjct: 3 PKVVDLTRREATAETLMESRVHC-DADDKDHYLYYFLLRHPGRTMVFANSIECVKRLAGLLGALACEALPLHANMHQKQRLKNLERFAERQSCVLLTTDVAARGLDIPNVEHVIHYQLPRTSETYVHRSGRTARATREGFSLILVGPGDVPAYRKICRALRGDKELPCFPVDPHNLTAVKARVALARSIEKELYHHSRAQHHNSWFQKAADAMDIELEDDML--MGEPSRR 230
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000216.1 (pep scaffold:Pmarinus_7.0:GL476721:117971:126978:-1 gene:ENSPMAG00000000186.1 transcript:ENSPMAT00000000216.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 155.221 bits (391), Expect = 1.490e-41 Identity = 103/328 (31.40%), Postives = 169/328 (51.52%), Query Frame = 1
Query: 484 QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTI---DVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
Q ++ LVLTPTRELA Q+++ + ++ + GG+ Q L ++P +++ TPGR +++ + A L LV+DEADRIL EV D+ + +P K R+T +FSAT+T V+K +++ +KE P+ + V +L Q+ + P + KD+ L + L G + I+F ++ N+ +R+ +L+ LG + L+ M Q RL L F S+L+A+DVA+RGLDIP +D VI+FD+ ++ ++HR GRTARA SG SI +S ++ F ++
Sbjct: 62 QRLFALVLTPTRELAFQISEQFEALGSSIGIKSAVVVGGIDMMSQSLALAKKPHVIIATPGRLVDHLENTKGFNIRA--LKYLVMDEADRILNMDFETEV------------DKILKVIP-KERKTYLFSATMT-----KKVQK------------------LQRAALKE-PVKCSVSTKYQTVEKLQQYYVFIPAK-FKDSYLVYILNELAGNSFIIFCSTCNNTQRIALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKGKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVSQYDVELFQRI 349
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Sea Lamprey
Match: ddx42 (DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]) HSP 1 Score: 133.265 bits (334), Expect = 9.136e-33 Identity = 100/362 (27.62%), Postives = 166/362 (45.86%), Query Frame = 1
Query: 475 KPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEK-LGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVK----DIQIKNIEYYEEVVKLAR 1545
KP GL+ PTREL Q+ K+ + +L A++GG S Q + L+ EIVV TPGR ++ + A + +++ LV DEADR+ + G +V + N ++ + RQT+++SAT +M+ V+ +G + I ++W LC + L F + G ++F K++ L++ L+ G L+ DM Q R K + F K +++A+DVAARGLDIP I V+++DVA +TH HR GRT RA G + +++ +M L+ +L+ + V D+ ++N + + K R
Sbjct: 318 KPGDGPIGLICVPTRELCQQINVECKRFGKAYNLHSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKK---ATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPD-------------RQTMLYSATF-----------RMRVEKLARDILIDPIRVVQGDIGEANEDVTQRVEIFSNGAAKWNWLC-------SHLVEFTSS--GSVLIFVTRKDNSEELSNDLEQEGFQVGLLHGDMDQSERNKVISDFKKKVIPIMVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRVGRTGRAGEKGTAFTLMTHKDMNFAGDLVRNLEGANQHVHKELMDLAMQNPWFRKTRFKGGR 643
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Sea Lamprey
Match: ddx49 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]) HSP 1 Score: 124.79 bits (312), Expect = 8.776e-31 Identity = 98/318 (30.82%), Postives = 161/318 (50.63%), Query Frame = 1
Query: 490 IYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVK--KQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVA----ARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLS 1425
I+ LVL PTRELA Q+ + + + L+ I GGM + RQ + L R+P +V+ TPGR ++ + S K+ LV+DEADR+LE+G +F ++ I +P K RQTL+FSATLT D ++ + + ++ + VE+L + ++ D D ++ Q+ +D W + IVF N+ + + L +L+ +L++ M+Q R L F + +LIA+DVA ARGLDIP + V++ + +T++HR GRTARA +G +I +++
Sbjct: 74 IFCLVLAPTRELAYQIAEQFRVMGKPLGLKDSVIVGGMDSVRQAQELARKPHVVIATPGRLADHLRSSN--TFSLKKIQFLVMDEADRLLEQG----ATDFTKDLQV------ILALPAK-RQTLLFSATLT-----DTLQELRNLALTNPFFWESKEPVRTVEELDQRYI-LVADKVKDAY------LVHIIQKIQDAHDDWSI-------IVFTNTCKNCQVLNMMLRHFNFPSVALHSMMRQTERFASLSKFKSSMFKILIATDVASSFWARGLDIPTVQVVLNHNTPSLPKTYIHRVGRTARAGRNGVAITIVT 359
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010109.1 (pep scaffold:Pmarinus_7.0:GL476492:615610:626431:-1 gene:ENSPMAG00000009147.1 transcript:ENSPMAT00000010109.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 124.405 bits (311), Expect = 3.177e-30 Identity = 95/325 (29.23%), Postives = 154/325 (47.38%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDT-----TIDVAQLSQWK----ILCPTQEDKDTRLYWFLK-NHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNS-GYSIIMLSPNEMG 1440
LVL+PTRELA Q L++ + I GG + + + L + I+V TPGR +Q+ + L LVIDEADRILE G E++ + + K RQT++FSAT T + + K+ +K+ P+ + T V L Q + ++CP+ E + L+ FLK N + + +VF +S SV+ + + L ++ +Q R F ++ L+ +DVAARGLDIP +D+++ FD + ++HR GRTAR + G+++++L P E+G
Sbjct: 253 LVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQNTN--TFMYKNLQCLVIDEADRILEVGFEEEIKQIIRLLP-------------KKRQTMLFSATQT-----------------------RKIEDLAKISLKKEPLYVGVDDHKETATVDGLEQQRSTPYVVCPS-EKRFLLLFTFLKKNRKKKIMVFFSSCMSVKFHYELFNYIDLPVMGIHGKQKQTKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGIGGQGHALLILRPEELG 538
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Yeast
Match: MAK5 (Essential nucleolar protein; putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus; involved in biogenesis of large (60S) ribosomal subunits [Source:SGD;Acc:S000000346]) HSP 1 Score: 205.682 bits (522), Expect = 2.292e-57 Identity = 149/444 (33.56%), Postives = 233/444 (52.48%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQ----FTDLQVCAIFGGMSAERQERLLK--RRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFM-NWMKTNAGDRFINGVPMKPRQTLVFSATLTF-----VHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQLSQWK---ILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESF------SKTEN----------SLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE-MGQFNKLLFSLQKSESDVKDIQIKN---------------------IEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEK--ADIKLDDEIVEKKNA 1665
L+ TPTRELA QVTDHLKK C+ + + ++ GG+S ++Q+RLLK +IV+ TPGRF ++ + SK++ L++DEADR+L+ GHF E E + + + +R + K QTL+FSAT + + S+ VK + + ++ N+ + + + K+ P+IIDT + SQ K I CP E +D Y+FL G T++F N+ +SV++LT L LG+ +++ M QK RLK LE F KT N ++LIASDVAARGLDIP + VIH+ + + + ++HRSGRTARA + G S ++ SP E MG KL +L S D+ ++ + E +LA E+ + ++ + NW +K A++ D+ D++ + K N+
Sbjct: 247 LIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVNTLILDEADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSSKIWQTLIFSATFSIDLFDKLSSSRQVKDR-RFKNNEDELNAVIQHLMSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLE-RDLYCYYFLTMFPGTTLIFCNAIDSVKKLTVYLNNLGIPAFQIHSSMTQKNRLKSLERFKQQSAKQKTINHSNPDSVQLSTVLIASDVAARGLDIPGVQHVIHYHLPRSTDIYIHRSGRTARAGSEGVSAMICSPQESMGPLRKLRKTLATKNSVSTDLNSRSTNRKPIKWQNTVPLLPIETDILSQLRERSRLAGELADHEIASNSLRKDDNWLKKAADELGIDVDSDEDDISKSNS 688
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Yeast
Match: RRP3 (Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity [Source:SGD;Acc:S000001107]) HSP 1 Score: 155.221 bits (391), Expect = 3.585e-41 Identity = 103/318 (32.39%), Postives = 160/318 (50.31%), Query Frame = 1
Query: 475 KPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLS 1425
+PY Y +L PTRELA Q+ + ++ I GGM+ Q R L R+P I++ TPGR +++ S KL LV+DEADR+L+ F V DR + +P + R T +FSAT+T D +++ K + +DT L Q ++ P K+T L + L G+T I+F +K + RL+ + L S +L+ D+ Q R+ L+ F + S+L+A+DVAARGLDIP +D V+++D+ +++++HR GRTARA SG SI ++S
Sbjct: 148 EPY---YACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENT--KGFSLRKLKFLVMDEADRLLDM-EFGPVL-----------DRILKIIPTQERTTYLFSATMT--SKIDKLQRASLTNPV-------------KCAVSNKYQTVDT------LVQTLMVVPGGL-KNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVS 426
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Yeast
Match: DRS1 (Nucleolar DEAD-box protein required for ribosome assembly and function; including synthesis of 60S ribosomal subunits; constituent of 66S pre-ribosomal particles [Source:SGD;Acc:S000003931]) HSP 1 Score: 149.058 bits (375), Expect = 4.752e-38 Identity = 103/316 (32.59%), Postives = 162/316 (51.27%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQF-TDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVA-QLSQWKILCPTQED-KDTRLYWFLK----NHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLS 1425
+VL PTRELA QV D K+ +F + + GG++ +QE++LK RP+IV+ TPGRF I++ + + + ILV+DEADR+LE+G E+ M + +N RQ L+FSAT+ SK+ + V K ++ID A +L+Q + ++ K L+ ++ Q R +VF K + RL ++ LG+S L+ + Q+ RL + F E +LI +D+A+RGLDIP+I+ VI++D+ + E +LHR GRTARA G S+ +
Sbjct: 306 IVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNS--ASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSN-------------RQNLLFSATMN----------------------SKIKSLVSLSLKKPVRIMIDPPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFVG 584
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Yeast
Match: HAS1 (ATP-dependent RNA helicase; involved in the biogenesis of 40S and 60S ribosome subunits; localizes to both the nuclear periphery and nucleolus; highly enriched in nuclear pore complex fractions; constituent of 66S pre-ribosomal particles [Source:SGD;Acc:S000004903]) HSP 1 Score: 137.502 bits (345), Expect = 5.499e-35 Identity = 111/392 (28.32%), Postives = 184/392 (46.94%), Query Frame = 1
Query: 475 KPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQ-----LSQWKILCPTQEDKDTR---LYWFLK-NHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNS-GYSIIMLSPNEMGQFNKLLFS-LQKSESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNN-RNWFEKMA 1614
KP +V+TPTRELA Q+ ++ +F + GG + ++ L + +++ TPGR +Q+ L L+IDEADRILE G F + M+ + I +P + RQ+++FSAT T + ++ ++ P+ I+ + L Q ++C D D R L+ FLK N + + IVF +S NSV+ +L + L L+ +Q+ R F E +LI +DVAARGLDIP +D++I FD ++HR GRTAR G S++ L+PNE+G L S + +E + + +I N++ +L + I+S ++ +T + R++ + A
Sbjct: 110 KPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQNT--KGFVFKNLKALIIDEADRILEIG-------FEDEMR-----QIIKILPNEDRQSMLFSATQT-----------------------TKVEDLARISLRPGPLFINVVPETDNSTADGLEQGYVVC----DSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPNELGFLRYLKASKVPLNEYEFPENKIANVQ-----SQLEKLIKSNYYLHQTAKDGYRSYLQAYA 455
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Yeast
Match: DBP3 (RNA-Dependent ATPase, member of DExD/H-box family; involved in cleavage of site A3 within the ITS1 spacer during rRNA processing; not essential for growth, but deletion causes severe slow-growth phenotype [Source:SGD;Acc:S000003046]) HSP 1 Score: 129.798 bits (325), Expect = 2.538e-32 Identity = 97/324 (29.94%), Postives = 158/324 (48.77%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTI-DVAQLSQWKILCPTQEDKDTR------LYWFLKNHQG-----RTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE 1434
LV++PTRELA Q+ D+L +Q C ++GG+ + Q R+ ++ ++VV TPGR +Q+ ++ S+++ LV+DEADR+LEKG +++N + +T+A RQTL+F+AT V +L I +I + QL+ K + E D R L K H G + ++FA K R+ L+ G + +++ D+ Q+ R + L F +++LL+A+DVAARGLDIP + VI+ T E ++HR GRT RA +G + + + E
Sbjct: 186 LVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQ-RIQLKKSQVVVATPGRLLDLLQE---GSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIR--ETDASK----------RQTLMFTATWP--------------------------KEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQE 467
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Nematostella
Match: EDO48238 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF5]) HSP 1 Score: 301.212 bits (770), Expect = 4.274e-94 Identity = 196/544 (36.03%), Postives = 299/544 (54.96%), Query Frame = 1
Query: 79 WKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMK-TNAGDRFIN-----------GVPMKPR-QTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKNIEYYEEV---VKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVE 1653
W+ L + +L+A+ +GF KPT IQ+L +P A+ DI+GAA TG+GKTLAFGIP+I + I+ YK + + SPS+ E + E P + L++ PTRELA QV DHL KA ++T ++V AI GGM+A +Q+RLLK+RPEIVV TPGR W I Q+ H + L LVIDEADR++E+GH+ E+ + + + +G+ ++ P K R Q +FSATLT S ++ +L + +E+ K +ID T V L++ KI C T+EDKD LY+FL + GRT+VFAN+ + VRRLTS+L+ + L+P L+A MQQ+ RLK L+ F + LL+A+DVAARGLDI I+ VIH+ V E ++HRSGRTARA + G S++++ P ++ + K + +L E D+ + ++ Y + + +AR+I+ + ++ +W A+ DI++D++++E
Sbjct: 4 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPII--------QHIEAYKKR------------------KAEQSPSDKESDL---------------------ESQGYP---LLALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLWELISQQEEHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELIHLKKSGNMEVDQEDAERPSNSSKTPEKARLQKFIFSATLTLPKSFKKRGREKTVSKGELLASLMDKIHLERKRSK----VIDVTSSRGTVETLTEAKITC-TKEDKDVYLYYFLLKYPGRTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAARGLDIANIEHVIHYQVPKDPEVYVHRSGRTARASHEGLSVVLVGPEDLAHYRKTMKTLNNGE-DLGSFPV-DVSYLPGIRNRLSIARQIDKEELKVSKKKSSNSWILNSAKAMDIEVDEDLLE 490
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Nematostella
Match: EDO33593 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRU4]) HSP 1 Score: 155.606 bits (392), Expect = 3.108e-41 Identity = 105/330 (31.82%), Postives = 168/330 (50.91%), Query Frame = 1
Query: 484 QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKL--GMKECPMIIDTTI---DVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
Q ++ L+LTPTRELA Q+++ + ++ I GG+ Q +L ++P I++ TPGR +++ S L LV+DEADRIL EV D+ + +P K R+T +FSAT+T KK V+KL + P+ ++ V +L Q + P++ KD L + L G + +VF + N+V+R+T +L+ LGL L+ M Q RL L F S+L+A+DVA+RGLDIP +D VI+FD+ ++ ++HR GRTARA SG S+ ++ ++ + ++
Sbjct: 81 QRLFALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENT--KGFSLRTLKYLVMDEADRILNMDFEKEV------------DKLLKVIP-KERRTFLFSATMT--------KK------------------VQKLQRASLQAPVKVEVATKYQTVEKLQQSYLFIPSKF-KDCYLVYVLNELAGNSFMVFCGTCNNVQRVTLMLRNLGLDAVPLHGQMSQSKRLGALNKFKSKSRSILVATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGRSVTFVTQYDVELYQRI 368
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Nematostella
Match: EDO43011 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZV2]) HSP 1 Score: 140.969 bits (354), Expect = 3.300e-36 Identity = 105/331 (31.72%), Postives = 168/331 (50.76%), Query Frame = 1
Query: 478 PYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFLKNHQGR--TIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
PY I+ +VLTPTRELA Q+ D K + L+ I GG+ +Q L +P +V+ TPGR I+ D L+ K+ LV+DEADR+L+ +F + +K + VP K RQTL+FSATLT D + + ++K+ + P + D VA+L Q +L P +D L L+ + IVF ++ + + L S+ LGL+ L++ + Q RL L F +L+A+DVA+RGLDIP+++ V++ ++ + ++HR GRTARA G +I M++ ++ + K+
Sbjct: 73 PY-GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPGRLADHIKSTD--TLNLKKIQFLVLDEADRLLD-------PSFGDDLKV-----IFDAVPEK-RQTLLFSATLT-----DTMGE------------------LQKMSGSQ-PFSYEVQSDIATVAELDQRYLLTPAHV-RDCYLVHLLRENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVTQYDIDRVKKI 362
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Nematostella
Match: EDO42894 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S034]) HSP 1 Score: 130.954 bits (328), Expect = 1.117e-31 Identity = 116/412 (28.16%), Postives = 185/412 (44.90%), Query Frame = 1
Query: 496 GLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQE------DKDTRLYWFLK-----NHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFN-KLLFSLQKSESDVKDIQIKNIEYYEEVVKLARE-IESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEF 1692
+V+TPTRELA Q+ KK C+ +L+ ++GG Q LKR EI+V TPGR + + + + + LV+DEADR+ + G +V ++ ++ + RQT++FSAT +QM E L K I+D I++ Q+ ++C E ++D + L+ QG +VF ++S L L SL+ M Q R + F L+IA+ VAARGLD+ ++ V+++D + E ++HR GRT RA N G + L+P E G+F ++ +L+ +E+ V E+V LA IE++ K +V N + K K +DE EK KK Q++
Sbjct: 213 AIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQVMRIIDCIRPD-------------RQTVMFSATFP---------RQM-----------------EALARK----ILDKPIEI-QVGGRSVVCSDVEQNVVVIEEDDKFLKLLELLGLYQEQGSVLVFVEKQDSADSLFKDLLKRSYPCLSLHGGMDQFDRDSTIADFKNGVTKLMIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRVGRTGRAGNKGTAYTFLTP-EQGRFAIDVIKALEMAENPVP----------EDVRNLANTYIETRKAEGKNIVKNSGFSGK-----GFKFNDE--EKAKVSEAKKIQKW 562
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Nematostella
Match: EDO38731 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SC22]) HSP 1 Score: 126.716 bits (317), Expect = 4.579e-31 Identity = 103/368 (27.99%), Postives = 173/368 (47.01%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDT-----TIDVAQLSQWKILCPTQEDKDTRLYWFLK-NHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNS-GYSIIMLSPNEMGQFNKLLFS-LQKSESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKT 1578
++++PTREL+ Q + + + I GG++ + + L++ +++ TPGR +Q+ L LVIDEADRILE G E+ + + P K RQT++FSAT T K + KL +K P+ + T V L Q I+ P+ E + L+ FLK N + +VF +S NSV+ + +L + L ++ +Q+ R F ++ +L+ +DVAARGLDIP +D+++ +D A + ++HR GRTAR G++++ L P E+ L + + +E D +I NI+ +L R IE ++ K+
Sbjct: 77 IIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLIATPGRLLDHLQN--TQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRIL------------PSK-RQTVLFSATQT-----------------------KNVEDLAKLSLKRSPLYVGVDDHKETSTVEGLEQGYIVVPS-EKRFLVLFTFLKKNRSKKVMVFFSSCNSVKYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPADDPKEYIHRVGRTARGTEGKGHALLFLLPEELAFLRYLKHAKVPLNEYDFSSSKILNIQ-----SQLERLIEKNYYLHKS 400
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Medaka
Match: ddx24 (DEAD-box helicase 24 [Source:NCBI gene;Acc:101158676]) HSP 1 Score: 349.362 bits (895), Expect = 5.726e-109 Identity = 221/546 (40.48%), Postives = 327/546 (59.89%), Query Frame = 1
Query: 70 LNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRIL-------------MDKQ--KEIDIY----KDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFT--GVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKP-RQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTT---IDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQK-SESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADI 1629
++ WK+L++P VLKA+ GF PT IQ L LP AIRD MD+LGAA TG+GKTLAFGIPMI IL +DK K + +Y ++ E E + ++ + D S +E + + + DE + T E C ++ + + G+VLTPTRELA QV H+ +FTD++ + GGM+ ++Q+R+LKR PEI++ TPGR W I+++ PH L+ L LVIDEADR++E+GHFAE+E+ + +N P RQT VFSATLT HS + ++ + L K SKL +EK+G+K P +ID T V L++ +I C +++KD LY+FL + GRT+VFANS + ++RL S+L L +P L+A+M QK RLK LE F++ E+ +L+ +DVAARGLDIP + VIH+ V T+ET++HRSGRTARA G S++++ P++M K+ +L+K ES + I+ K +E +E V LAR+IE ++ +WF++ AE ++
Sbjct: 215 VSAWKDLFVPSSVLKALSSLGFESPTPIQALALPPAIRDHMDVLGAAETGSGKTLAFGIPMIHAILEWKRGTEQSLHDNIDKTPPKVVSLYLPSVEESAKSEDESTAVGNQEGSVEASDEEDSSAE-DGSEDQDEKTGSVCTVKNAERCVEEQLAGGRSRPLLGMVLTPTRELAVQVKHHIDAVTKFTDIKTAILVGGMAQQKQKRMLKRCPEIIIATPGRLWDLIKEKHPHLLNLRHLRCLVIDEADRMVERGHFAELESLLE---------MLNTTHFNPKRQTFVFSATLTLTHS---LPSRLLQKKKNLEKRSKLDILIEKVGIKSKPKVIDLTRKEATVETLTETQIHC-QKDEKDFYLYYFLLQYPGRTMVFANSIDCIKRLNSLLVILECNPLPLHANMHQKQRLKNLERFAERESGVLLTTDVAARGLDIPDVQHVIHYQVPRTSETYVHRSGRTARATKEGLSLLLVGPDDMINLKKIYKTLEKDEESPMFPIETKCLEAIKERVNLARKIEKIEFYNSREKHHDSWFKQAAEALEV 746
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Medaka
Match: ddx47 (DEAD-box helicase 47 [Source:NCBI gene;Acc:101159675]) HSP 1 Score: 152.14 bits (383), Expect = 2.829e-39 Identity = 103/329 (31.31%), Postives = 172/329 (52.28%), Query Frame = 1
Query: 484 QHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE---CPMIID-TTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKL 1455
Q ++ LVLTPTRELA Q+++ + ++ I GG+ Q +L ++P IV+ TPGR +++ +L A L LV+DEADRIL EV D+ + +P + R+T +FSAT+T V+K +++ +K+ C + +T+D +L Q+ + P + KD L L G + ++F ++ N+ +R+ +L+ LG++ L+ M Q RL L F S+L+A+DVA+RGLDIP +D VI++D+ ++ ++HR GRTARA SG SI ++ ++ F ++
Sbjct: 106 QRLHTLVLTPTRELAFQISEQFEALGSSIGVKCAVIVGGIDMMSQSLVLAKKPHIVIATPGRLIDHMENTKGFSLRA--LKFLVMDEADRILNMDFETEV------------DKILKVIP-RERRTFLFSATMT-----KKVQK------------------LQRAALKDPVKCAVSTKYSTVD--KLQQYYVFIPAKY-KDCYLVSILNELAGNSFMIFCSTCNNAQRVALMLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINYDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRI 393
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Medaka
Match: ddx49 (DEAD-box helicase 49 [Source:NCBI gene;Acc:101169189]) HSP 1 Score: 144.436 bits (363), Expect = 8.385e-37 Identity = 129/420 (30.71%), Postives = 202/420 (48.10%), Query Frame = 1
Query: 478 PYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTID---VAQLSQWKILCPTQEDKDTRLYWFL-----KNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVN-NRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEA 1710
PY I+ LVLTPTRELA Q+ + + + L+ C + GGM Q L ++P +VV TPGR ++ + S K+ L++DEADR+LE+G +F T + + +P K RQTL+FSATLT D +++ ++ + M + P ++T + V +L Q IL P ++ KD L + K+ I+F N+ + + LT +L+ SL++ M+Q+ R L F + +LIA+DVAARGLDIP + VI+ + + ++HR GRTARA +G SI +++ ++ L+ S+++ + K EY E E + H T VN R E E D EI ++K + K E E K +A
Sbjct: 68 PYG-IFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIVVGGMDMVTQALELSKQPHVVVATPGRLADHVRSSN--TFSMRKIKFLILDEADRLLEQG----CTDF-----TKDLEEILGTLPAK-RQTLLFSATLT-----DTLQE------------------LKSIAMNK-PFFWESTSETRTVEELDQRYILTP-EKVKDAYLVHLIQTFTDKHDDWSIIIFTNTCKNCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKASVYKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDI----HLVHSIEEQ------TKTKLTEYPVE--------EKEVHKILTQVNVTRRECEIRLESTDFDEKKEINKRKQLILEGKDPELEAKRKA 431
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Medaka
Match: ddx27 (DEAD-box helicase 27 [Source:NCBI gene;Acc:101158015]) HSP 1 Score: 134.42 bits (337), Expect = 1.796e-32 Identity = 93/317 (29.34%), Postives = 159/317 (50.16%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE-CPMIIDTTIDVAQLSQWKILC--PTQE-DKDTRLYWFL-KNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE 1434
LVL PTREL QV ++ QFT + C GG+ + QE L+ P++++ TPGR + + LS + IL++DEADR+L++ +++ + N RQT++FSAT+T + VK + + +K+ + +++ DVA + + + P +E D++ + L + Q ++F ++ RL +L +GL L+ ++ Q RL+ L F + +L+A+DVAARGLDI + VI+F + T + ++HR GRTARA SG S+ ++ +E
Sbjct: 248 LVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGLDLKSQEAALRAGPDVLIATPGRLIDHLHNTPNFELS--HIEILILDEADRMLDEYFEEQMKEIIRLCSYN-------------RQTMLFSATMT-----EEVKD------------------LAAVSLKQPVRIFVNSNTDVAPFLRQEFIRIRPHREGDREAVVAALLTRTFQDHVMLFTQTRKQAHRLHILLGLMGLKVGELHGELSQNQRLENLRRFKDDQIDILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLVGESE 526
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Medaka
Match: ddx27 (DEAD-box helicase 27 [Source:NCBI gene;Acc:101158015]) HSP 1 Score: 134.035 bits (336), Expect = 2.808e-32 Identity = 93/317 (29.34%), Postives = 159/317 (50.16%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE-CPMIIDTTIDVAQLSQWKILC--PTQE-DKDTRLYWFL-KNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE 1434
LVL PTREL QV ++ QFT + C GG+ + QE L+ P++++ TPGR + + LS + IL++DEADR+L++ +++ + N RQT++FSAT+T + VK + + +K+ + +++ DVA + + + P +E D++ + L + Q ++F ++ RL +L +GL L+ ++ Q RL+ L F + +L+A+DVAARGLDI + VI+F + T + ++HR GRTARA SG S+ ++ +E
Sbjct: 270 LVLVPTRELGIQVHSVARQLAQFTSITTCLAVGGLDLKSQEAALRAGPDVLIATPGRLIDHLHNTPNFELS--HIEILILDEADRMLDEYFEEQMKEIIRLCSYN-------------RQTMLFSATMT-----EEVKD------------------LAAVSLKQPVRIFVNSNTDVAPFLRQEFIRIRPHREGDREAVVAALLTRTFQDHVMLFTQTRKQAHRLHILLGLMGLKVGELHGELSQNQRLENLRRFKDDQIDILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARAGRSGRSVSLVGESE 548
BLAST of ATP-dependent RNA helicase DDX24 vs. Planmine SMEST
Match: SMESG000016093.1 (SMESG000016093.1) HSP 1 Score: 1199.11 bits (3101), Expect = 0.000e+0 Identity = 626/630 (99.37%), Postives = 628/630 (99.68%), Query Frame = 1
Query: 55 MANDILNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILXXXXXXXXXXLAFGIPMISRILMDKQKEIDIYKDXXXXXXXXXXXXXXXXXXDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYLDKIDLDFKSPLSGHVKIVSEESKFEPIATVTKFQSDPNTVKKNSTNNKRKKPINDNILSENPGYKKMKNK 1944
MANDILNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILGAAATGTGKTLAFGIPMISRILMDKQKEIDIYKDENIEESEDIEMDSEVEENDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLS+LVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMKKLTSKLTKNSKLSNFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYLDKIDLDFKSPLSGHVKIVSEESKFEPIATV+KFQSD NTVKKNSTN KRKKPINDNILSENPGYKKMKNK
Sbjct: 1 MANDILNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILGAAATGTGKTLAFGIPMISRILMDKQKEIDIYKDENIEESEDIEMDSEVEENDQCDLSPSESELEFAWNDDEIKPELFTGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSVLVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMKKLTSKLTKNSKLSNFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKNIEYYEEVVKLAREIESQSHVTKTVVNNRNWFEKMAEKADIKLDDEIVEKKNAPSKKKTQEFEKKSEALDLKIKYLDKIDLDFKSPLSGHVKIVSEESKFEPIATVSKFQSDSNTVKKNSTNKKRKKPINDNILSENPGYKKMKNK 630
BLAST of ATP-dependent RNA helicase DDX24 vs. Planmine SMEST
Match: SMESG000060345.1 (SMESG000060345.1) HSP 1 Score: 149.828 bits (377), Expect = 2.323e-38 Identity = 106/345 (30.72%), Postives = 176/345 (51.01%), Query Frame = 1
Query: 454 RIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXX----XXXXXXXXXXXXXFVEKLGMKECPMIIDTTID-------------VAQLSQWKILCPTQEDKDTRLYWFLKNHQGRTI-VFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNE 1434
++ N +P ++++PTREL+ Q + L+K T+L+ + GG + + + + L+ I+V TPGR + + +L L+IDEADR++E+G E+ + +P K RQT++FSATL S+ +K +MKK S + + L MKE M+ID + + V+QLSQ ++C D+ LY F+K +Q + I VF ++ V+ + + + +L+ Q RLK E F++ E +++ +DVAARGLDIP +D+V+ +D + ++HR GRTARA N+G ++I L P E
Sbjct: 77 KVLNSNFEPRHGTAAIIMSPTRELSVQTFEVLRKLVVHTELRTGLLIGGNNRQVEAKYLQEGVTILVATPGRLLDHLNNTKFFLFH--RLQTLIIDEADRLMEQGFLEEM------------TAIVRKLP-KKRQTVLFSATLKM--SSAKLKMKMKKPEIDKRSSKVSTEEKVLTLACLSMKENCMLIDMSKEKLEANVVGGDNATVSQLSQGYVVC-KPSDRFRLLYTFIKKNQKKKIMVFMSTCLEVKYFYELFNIINVPVLALHGKQSQPKRLKNFEKFNENEAAIIFCTDVAARGLDIPLVDWVLQYDPPDDPKEYIHRVGRTARAGNAGQALIFLRPEE 403
BLAST of ATP-dependent RNA helicase DDX24 vs. Planmine SMEST
Match: SMESG000051946.1 (SMESG000051946.1) HSP 1 Score: 134.806 bits (338), Expect = 1.168e-33 Identity = 101/366 (27.60%), Postives = 162/366 (44.26%), Query Frame = 1
Query: 436 TGVEMCRIKEDNCKPYQHIYGLVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDP-HALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPM---KPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFLKNHQGRT-------------------------IVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQF 1446
TG I ++ K + + LV TPTRELA Q+ + ++ + GG+ + Q + +P I++ TPGRF + + + L LV+DEADR+L ++ DR +N + + R+T +FSAT T D V K + K S + E ++L ++ +LCP E + L W LK ++ IVF ++ L LQ LGL+ + +N+DM Q+ R + + +++A+DVAARG+DIP +D VI +D+ +A+T+ HR+GRTARA G SI M++ Q+
Sbjct: 52 TGAFTIPILQELMKDPKPFFALVFTPTRELAIQIQTEFNGLGKGIGVKCATLIGGLCEKTQATQILNKPHIIIATPGRFLKHVATTKGFNEQTLKNLKFLVMDEADRML----------------SSQFDRDLNKILYILPRTRRTFLFSATNT-----DKVSKLQRASLIDPVKVSVDEKYAES----------------SELKEFMLLCP-YEQQSAHLVWLLKQLTCKSAKPTEFDIAAFNYLDSDGKKATKSIIVFVQTRMMSNLLAYFLQKLGLNAQPINSDMSQEQRTATIHKMKMRKVDIMVATDVAARGIDIPNVDVVIQYDIPESAKTYTHRAGRTARAGKRGVSITMVNQYNTPQY 379
BLAST of ATP-dependent RNA helicase DDX24 vs. Planmine SMEST
Match: SMESG000072404.1 (SMESG000072404.1) HSP 1 Score: 127.487 bits (319), Expect = 1.349e-30 Identity = 103/366 (28.14%), Postives = 178/366 (48.63%), Query Frame = 1
Query: 496 GLVLTPTRELACQVTDHLKKACQFT-DLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEKLGMKE-CPMIIDTTIDVA---QLSQWKILCPTQEDKDTRLYWFL-KNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKT--ENS---LLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSPNEMGQFNKLLFSLQKSESDVKDIQIKNIEYYEEVVKLAREIESQ 1560
+VL+PTRELA Q+ + K +F+ L V + GG++ QE L+ +I++ TPGR I + L K+ ++DEAD++L++ +++ + RQ ++FSAT+T + VK + L +K+ + ++ DVA Q +I ED++ L + + RTI+F +KN R+ +L G+ L+++M Q RL L F+KT EN +L+ +D+AARGLD+ I+ V+++ + E ++HR GRTAR SG +I +++ +E KL+ K+ ++ I + +++Y E +KL E SQ
Sbjct: 175 AVVLSPTRELALQIYEVAKMLIKFSPKLSVQLVSGGLNRSNQEACLRNGADIIIATPGRLIDIIHNTPNFDLL--KIEFFILDEADKMLDEYFIEQIKEVLKGCSPT-------------RQVMLFSATMT-----ENVKDLIS------------------LSLKDPFKIFVNQNNDVADNLQQEVIRIRSHRAEDREAMLMALICRGFSKRTIIFLPTKNLCHRIHIMLGLFGVKCAELHSNMTQAQRLDALGRFAKTVDENERVDVLVGTDLAARGLDVENIETVVNYSLPKKYEQYIHRVGRTARNQKSGRAISLVAEDERNML-KLICKGSKNGVKMRKIDPEVVDFYTEKIKLFSETVSQ 501
BLAST of ATP-dependent RNA helicase DDX24 vs. Planmine SMEST
Match: SMESG000012031.1 (SMESG000012031.1) HSP 1 Score: 128.642 bits (322), Expect = 2.246e-30 Identity = 92/334 (27.54%), Postives = 167/334 (50.00%), Query Frame = 1
Query: 499 LVLTPTRELACQVTDHLKKACQFTDLQVCAIFGGMSAERQERLLKRRPEIVVVTPGRFWAFIQDQDPHALSASKLSILVIDEADRILEKGHFAEVENFMNWMKTNAGDRFINGVPMKPRQTLVFSATLTFVHSADAVKKQMXXXXXXXXXXXXXXXFVEK-LGMKECPMIIDTTIDVAQLSQWKILCPTQEDKDTRLYWFL-KNHQGRTIVFANSKNSVRRLTSVLQTLGLSPKSLNADMQQKMRLKKLESFSKTENSLLIASDVAARGLDIPRIDFVIHFDVAHTAETHLHRSGRTARALNSGYSIIMLSP--NEMGQFNKLLFSLQKSESDV 1488
L+L PTRELA QV + ++ +++ +GG S Q L + PE+V+ TPGR F+ D+ + + + LV+DEADR+L+ G ++ ++ ++ + RQTL++SAT + S+F++ + + + + D+ Q K+ +++K+ RL L N + R++VF+ +K V L ++ G+ +++ D Q+ R K L+ F +LIA+DVA+RGLDI I++VI++D E ++HR GRTAR+ G + +P ++ Q L+ L++++ +V
Sbjct: 154 LILVPTRELAQQVEKVAIEFSEYAKIKIACCYGGASRNSQIHQLNKNPEVVIATPGRLIDFLNDK---ITNLRRCTYLVLDEADRMLDMGFEPDIRKIVSQVRPD-------------RQTLMWSATWP------------------NEVQNLASDFLKNYVQINVGSLYLHANPDIKQ----KVEILDEKEKEERLIEILCDNKRKRSLVFSETKRKVDDLCRIIVRKGIDCMAMHGDKVQREREKVLQDFRDGRCYVLIATDVASRGLDIDDIEYVINYDYPSKLEDYIHRIGRTARSGKKGIAYTFFNPMKDKPRQAQDLIMILEEAKQEV 449 The following BLAST results are available for this feature:
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase DDX24 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30032193 ID=SMED30032193|Name=ATP-dependent RNA helicase DDX24|organism=Schmidtea mediterranea sexual|type=transcript|length=1984bpback to top protein sequence of SMED30032193-orf-1 >SMED30032193-orf-1 ID=SMED30032193-orf-1|Name=SMED30032193-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=631bp MANDILNNWKNLYIPEPVLKAIEKEGFLKPTQIQTLVLPCAIRDRMDILGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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