Transcription factor RFX4
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30032163 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of Transcription factor RFX4 vs. Ensembl Human
Match: RFX4 (regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]) HSP 1 Score: 173.711 bits (439), Expect = 3.658e-46 Identity = 134/475 (28.21%), Postives = 240/475 (50.53%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQK----TSPSLNVQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWV-----KDIFHSSWENMGISFKTC---FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESMIQEFEHLIQTLNRIIYSETSLN--YSQCIQLNSTSPHPLPCKT 1461 ++K S T+ WL+ENY EGV + R LY +Y FC + ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K S + + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S + +LI + ++ F++LLE + ++W+ + + + + G K L W+ F ++ +++M L + FG +L+ L + L+ ES+ + L R + E S + I + +P P P + Sbjct: 51 RASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRD-EHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL--HCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPS 512
BLAST of Transcription factor RFX4 vs. Ensembl Human
Match: RFX4 (regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]) HSP 1 Score: 173.711 bits (439), Expect = 4.721e-46 Identity = 134/475 (28.21%), Postives = 240/475 (50.53%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQK----TSPSLNVQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWV-----KDIFHSSWENMGISFKTC---FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESMIQEFEHLIQTLNRIIYSETSLN--YSQCIQLNSTSPHPLPCKT 1461 ++K S T+ WL+ENY EGV + R LY +Y FC + ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K S + + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S + +LI + ++ F++LLE + ++W+ + + + + G K L W+ F ++ +++M L + FG +L+ L + L+ ES+ + L R + E S + I + +P P P + Sbjct: 60 RASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRD-EHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL--HCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPS 521
BLAST of Transcription factor RFX4 vs. Ensembl Human
Match: RFX4 (regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]) HSP 1 Score: 153.68 bits (387), Expect = 1.993e-42 Identity = 87/245 (35.51%), Postives = 138/245 (56.33%), Query Frame = 1 Query: 154 LKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQK----TSPSLNVQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIP 849 L+ENY EGV + R LY +Y FC + ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K S + + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P Sbjct: 10 LEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP 247
BLAST of Transcription factor RFX4 vs. Ensembl Human
Match: RFX6 (regulatory factor X6 [Source:HGNC Symbol;Acc:HGNC:21478]) HSP 1 Score: 153.68 bits (387), Expect = 6.329e-39 Identity = 116/427 (27.17%), Postives = 206/427 (48.24%), Query Frame = 1 Query: 121 KRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIET---IKNSNNEDQL-------SQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKI-----FYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXX-----XXXXXXXXXXXXXXKWV-----KDIFHSSWENMGISFKTC----FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLE 1314 K+ T+ WL+ENY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K + KN K + +T + + L ++ +MY+TH Q I+D+ I+G+F+EI +LL FW+ P+H L E ++ID D +Y + ++ + +P+ L + +F N+ + +S+ + + L +KKI F + + +Q F HL +I P L +++ ++ + + + + +I + + S + + EH ++LL+ + + + ++W+ + + +S +N G S K L W+ F ++ + + L+ + FG +L+ + L+ Sbjct: 117 KKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYH-------SVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRRFVSSLKRQTSF-----LHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTISGSTDTES-GIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQN-GRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLD 529
BLAST of Transcription factor RFX4 vs. Ensembl Human
Match: RFX4 (regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]) HSP 1 Score: 130.183 bits (326), Expect = 7.478e-34 Identity = 73/179 (40.78%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 115 STKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQK----TSPSLNVQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDE 621 ++K S T+ WL+ENY EGV + R LY +Y FC + ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K S + + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE Sbjct: 61 ASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDE 232
BLAST of Transcription factor RFX4 vs. Ensembl Celegans
Match: daf-19 (RFX-like transcription factor daf-19 [Source:UniProtKB/Swiss-Prot;Acc:Q09555]) HSP 1 Score: 86.6557 bits (213), Expect = 1.128e-17 Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSS 375 T++WL ENY EG SL R LY++Y+ C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K SS Sbjct: 116 TVNWLFENYEIGEG-SLPRCELYDHYKKHCAEHRMDPVNAASFGKLIRSVFHNLKTRRLGTRGNSKYHYYGIRLKDSS 192
BLAST of Transcription factor RFX4 vs. Ensembl Celegans
Match: daf-19 (RFX-like transcription factor daf-19 [Source:UniProtKB/Swiss-Prot;Acc:Q09555]) HSP 1 Score: 86.6557 bits (213), Expect = 1.138e-17 Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSS 375 T++WL ENY EG SL R LY++Y+ C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K SS Sbjct: 93 TVNWLFENYEIGEG-SLPRCELYDHYKKHCAEHRMDPVNAASFGKLIRSVFHNLKTRRLGTRGNSKYHYYGIRLKDSS 169
BLAST of Transcription factor RFX4 vs. Ensembl Celegans
Match: daf-19 (RFX-like transcription factor daf-19 [Source:UniProtKB/Swiss-Prot;Acc:Q09555]) HSP 1 Score: 86.6557 bits (213), Expect = 1.167e-17 Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSS 375 T++WL ENY EG SL R LY++Y+ C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K SS Sbjct: 77 TVNWLFENYEIGEG-SLPRCELYDHYKKHCAEHRMDPVNAASFGKLIRSVFHNLKTRRLGTRGNSKYHYYGIRLKDSS 153
BLAST of Transcription factor RFX4 vs. Ensembl Celegans
Match: daf-19 (RFX-like transcription factor daf-19 [Source:UniProtKB/Swiss-Prot;Acc:Q09555]) HSP 1 Score: 86.6557 bits (213), Expect = 1.492e-17 Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSV 378 T++WL ENY EG SL R LY++Y+ C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K SS Sbjct: 235 TVNWLFENYEIGEG-SLPRCELYDHYKKHCAEHRMDPVNAASFGKLIRSVFHNLKTRRLGTRGNSKYHYYGIRLKDSST 312
BLAST of Transcription factor RFX4 vs. Ensembl Celegans
Match: daf-19 (RFX-like transcription factor daf-19 [Source:UniProtKB/Swiss-Prot;Acc:Q09555]) HSP 1 Score: 86.6557 bits (213), Expect = 1.498e-17 Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSV 378 T++WL ENY EG SL R LY++Y+ C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K SS Sbjct: 260 TVNWLFENYEIGEG-SLPRCELYDHYKKHCAEHRMDPVNAASFGKLIRSVFHNLKTRRLGTRGNSKYHYYGIRLKDSST 337
BLAST of Transcription factor RFX4 vs. Ensembl Fly
Match: Rfx (gene:FBgn0020379 transcript:FBtr0337103) HSP 1 Score: 110.923 bits (276), Expect = 2.999e-25 Identity = 108/468 (23.08%), Postives = 192/468 (41.03%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGD-------IDPYSQKTS-----PSLNVQHP----------------KNRVDSVPKIQFTIET----------------------IKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKT--------CPEHFKHLFEKSLLI--------DGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWE------NMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLV-FLWLEHLFY 1326 TI WL NY +GVSL R TLY +Y C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ + K N + D P S T P ++V + + K F ET + +S N + +++ F +Y+ H + +D++++ F+ + L FW+ C E K+L + L + V +D Q Y ++ + S+P+ + +F N I L S+ + + L + K F Q + +HL + VL + IS++L + + N+ + + Q + P ++ +F+ L+ S ++ W++ + S+ E + + L W+ + S ++++ L + FG +L+ L+ E++FY Sbjct: 356 TIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGIRI-KPGSLLNSQAMDDKQMLAAGYGPSSDGTGGPGSGPMVSVTSSTAGQLTGSNGLGGGHGQRHSNGTKKHTFKPETYEACIQYIGDGTSALPSFPPIELNHSFNSELTLEDVDTFRGLYREHCESFLDAVLNLEFNTVEFLLRDFWRASDNNNLDECEEE-KYLSKTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVSAFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWVSQCA-----PAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSSMIIRDLTLRSASSFGSFHLIRLLFDEYMFY 816
BLAST of Transcription factor RFX4 vs. Ensembl Fly
Match: Rfx (gene:FBgn0020379 transcript:FBtr0337104) HSP 1 Score: 110.538 bits (275), Expect = 3.711e-25 Identity = 108/468 (23.08%), Postives = 192/468 (41.03%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGD-------IDPYSQKTS-----PSLNVQHP----------------KNRVDSVPKIQFTIET----------------------IKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKT--------CPEHFKHLFEKSLLI--------DGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWE------NMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLV-FLWLEHLFY 1326 TI WL NY +GVSL R TLY +Y C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ + K N + D P S T P ++V + + K F ET + +S N + +++ F +Y+ H + +D++++ F+ + L FW+ C E K+L + L + V +D Q Y ++ + S+P+ + +F N I L S+ + + L + K F Q + +HL + VL + IS++L + + N+ + + Q + P ++ +F+ L+ S ++ W++ + S+ E + + L W+ + S ++++ L + FG +L+ L+ E++FY Sbjct: 334 TIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGIRI-KPGSLLNSQAMDDKQMLAAGYGPSSDGTGGPGSGPMVSVTSSTAGQLTGSNGLGGGHGQRHSNGTKKHTFKPETYEACIQYIGDGTSALPSFPPIELNHSFNSELTLEDVDTFRGLYREHCESFLDAVLNLEFNTVEFLLRDFWRASDNNNLDECEEE-KYLSKTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVSAFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWVSQCA-----PAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSSMIIRDLTLRSASSFGSFHLIRLLFDEYMFY 794
BLAST of Transcription factor RFX4 vs. Ensembl Fly
Match: Rfx (gene:FBgn0020379 transcript:FBtr0337107) HSP 1 Score: 92.4337 bits (228), Expect = 2.644e-19 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSV 378 TI WL NY +GVSL R TLY +Y C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K S+ Sbjct: 371 TIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGIRIKPGSL 449 HSP 2 Score: 51.6026 bits (122), Expect = 1.906e-6 Identity = 55/286 (19.23%), Postives = 121/286 (42.31%), Query Frame = 1 Query: 538 QEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKT--------CPEHFKHLFEKSLLI--------DGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWE------NMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLV-FLWLEHLFY 1326 +++ F +Y+ H + +D++++ F+ + L FW+ C E K+L + L + V +D Q Y ++ + S+P+ + +F N I L S+ + + L + K F Q + +HL + VL + IS++L + + N+ + + Q + P ++ +F+ L+ S ++ W++ + S+ E + + L W+ + S ++++ L + FG +L+ L+ E++FY Sbjct: 552 EDVDTFRGLYREHCESFLDAVLNLEFNTVEFLLRDFWRASDNNNLDECEEE-KYLSKTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVSAFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWVSQCA-----PAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSSMIIRDLTLRSASSFGSFHLIRLLFDEYMFY 831
BLAST of Transcription factor RFX4 vs. Ensembl Fly
Match: Rfx (gene:FBgn0020379 transcript:FBtr0337106) HSP 1 Score: 92.4337 bits (228), Expect = 2.700e-19 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSV 378 TI WL NY +GVSL R TLY +Y C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K S+ Sbjct: 363 TIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGIRIKPGSL 441 HSP 2 Score: 51.6026 bits (122), Expect = 1.775e-6 Identity = 55/286 (19.23%), Postives = 121/286 (42.31%), Query Frame = 1 Query: 538 QEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKT--------CPEHFKHLFEKSLLI--------DGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWE------NMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLV-FLWLEHLFY 1326 +++ F +Y+ H + +D++++ F+ + L FW+ C E K+L + L + V +D Q Y ++ + S+P+ + +F N I L S+ + + L + K F Q + +HL + VL + IS++L + + N+ + + Q + P ++ +F+ L+ S ++ W++ + S+ E + + L W+ + S ++++ L + FG +L+ L+ E++FY Sbjct: 544 EDVDTFRGLYREHCESFLDAVLNLEFNTVEFLLRDFWRASDNNNLDECEEE-KYLSKTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVSAFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWVSQCA-----PAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSSMIIRDLTLRSASSFGSFHLIRLLFDEYMFY 823
BLAST of Transcription factor RFX4 vs. Ensembl Fly
Match: Rfx (gene:FBgn0020379 transcript:FBtr0337105) HSP 1 Score: 92.4337 bits (228), Expect = 2.879e-19 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSV 378 TI WL NY +GVSL R TLY +Y C H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K S+ Sbjct: 393 TIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRRLGTRGNSKYHYYGIRIKPGSL 471 HSP 2 Score: 51.6026 bits (122), Expect = 1.672e-6 Identity = 55/286 (19.23%), Postives = 121/286 (42.31%), Query Frame = 1 Query: 538 QEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKT--------CPEHFKHLFEKSLLI--------DGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWE------NMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLV-FLWLEHLFY 1326 +++ F +Y+ H + +D++++ F+ + L FW+ C E K+L + L + V +D Q Y ++ + S+P+ + +F N I L S+ + + L + K F Q + +HL + VL + IS++L + + N+ + + Q + P ++ +F+ L+ S ++ W++ + S+ E + + L W+ + S ++++ L + FG +L+ L+ E++FY Sbjct: 574 EDVDTFRGLYREHCESFLDAVLNLEFNTVEFLLRDFWRASDNNNLDECEEE-KYLSKTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVSAFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWVSQCA-----PAVVQRLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSSMIIRDLTLRSASSFGSFHLIRLLFDEYMFY 853
BLAST of Transcription factor RFX4 vs. Ensembl Zebrafish
Match: rfx4 (regulatory factor X, 4 [Source:NCBI gene;Acc:403016]) HSP 1 Score: 174.096 bits (440), Expect = 1.672e-46 Identity = 127/435 (29.20%), Postives = 224/435 (51.49%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFH-----------SSWENMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESM 1338 ++K S T+ WL+ENY EGV + R LY +Y FC ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K + +N + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S Q +LI + ++ F+ LLE + ++W+ + S + + F L W+ F ++ +++M L + FG +L+ L + L+ ES+ Sbjct: 51 RASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPDFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSREDQR-RLIIQLYQEFDRLLEDQSPIEAYIEWLDSMVERCVVRVAGKRPGSLKRVAQQF---LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 471
BLAST of Transcription factor RFX4 vs. Ensembl Zebrafish
Match: rfx4 (regulatory factor X, 4 [Source:NCBI gene;Acc:403016]) HSP 1 Score: 174.096 bits (440), Expect = 1.722e-46 Identity = 127/435 (29.20%), Postives = 224/435 (51.49%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFH-----------SSWENMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESM 1338 ++K S T+ WL+ENY EGV + R LY +Y FC ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K + +N + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S Q +LI + ++ F+ LLE + ++W+ + S + + F L W+ F ++ +++M L + FG +L+ L + L+ ES+ Sbjct: 51 RASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPDFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSREDQR-RLIIQLYQEFDRLLEDQSPIEAYIEWLDSMVERCVVRVAGKRPGSLKRVAQQF---LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 471
BLAST of Transcription factor RFX4 vs. Ensembl Zebrafish
Match: rfx6 (regulatory factor X, 6 [Source:NCBI gene;Acc:556925]) HSP 1 Score: 153.295 bits (386), Expect = 4.607e-39 Identity = 95/312 (30.45%), Postives = 158/312 (50.64%), Query Frame = 1 Query: 121 KRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIET---------IKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENI 1026 K+ T+ WL++NY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K + KN K + +T ++ +D +S+E + +MY+TH Q I+D+ I+ +F+EI +LL FW+ PEH L E +++D D +Y + ++ + +P+ L + +F ++ + +S+ + ++L EKK+ A F HL +I P L +++ ++ + + + +I Sbjct: 49 KKKQTQLTLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLDPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYH-------SVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVLQDSVSKEKVDTLIMMYKTHCQCILDNAINVNFEEIQNFLLHFWQGMPEHLLPLLENPVIVDIFCVCDSILYKVLTDVLIPATMQDMPESLLADIRNFAKHWEHWMLSSLENLPEILSEKKVPIARRFVSSLKRQTSFLHLAQIARPALFDQIVVTSMVNDIDKVDLNSI 353
BLAST of Transcription factor RFX4 vs. Ensembl Zebrafish
Match: rfx6 (regulatory factor X, 6 [Source:NCBI gene;Acc:556925]) HSP 1 Score: 152.91 bits (385), Expect = 7.083e-39 Identity = 101/334 (30.24%), Postives = 166/334 (49.70%), Query Frame = 1 Query: 58 YSIPQIGYQI-PKMTDADGESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIET---------IKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENI 1026 YS P Q PK + + K+ T+ WL++NY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K + KN K + +T ++ +D +S+E + +MY+TH Q I+D+ I+ +F+EI +LL FW+ PEH L E +++D D +Y + ++ + +P+ L + +F ++ + +S+ + ++L EKK+ A F HL +I P L +++ ++ + + + +I Sbjct: 86 YSKPFAAKQTQPKKSISQIIKDKKKQTQLTLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLDPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYH-------SVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVLQDSVSKEKVDTLIMMYKTHCQCILDNAINVNFEEIQNFLLHFWQGMPEHLLPLLENPVIVDIFCVCDSILYKVLTDVLIPATMQDMPESLLADIRNFAKHWEHWMLSSLENLPEILSEKKVPIARRFVSSLKRQTSFLHLAQIARPALFDQIVVTSMVNDIDKVDLNSI 412
BLAST of Transcription factor RFX4 vs. Ensembl Zebrafish
Match: rfx3 (regulatory factor X, 3 (influences HLA class II expression) [Source:NCBI gene;Acc:570989]) HSP 1 Score: 101.293 bits (251), Expect = 4.599e-22 Identity = 89/386 (23.06%), Postives = 160/386 (41.45%), Query Frame = 1 Query: 73 IGYQIPKMTDADGESTKRDSLHRT-ISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYF----------------------------------NFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWK---TCPEHFKHLFEKSLL--IDGVI-------------------TIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ 1053 I I + ++G S++R SL + + WL +NY EGVSL R TLY +Y C+ ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ VK S NF++ G P + + + QH + +D + +E + +++ +Y+ H + I+D +++ F+ I +FW+ + + E S L I+G + T D +Y A+ ++ + +P + +F + L+N++ +I + K+ F Q + +HL + VL +T I+++L + + N+ + + Q Sbjct: 165 IEMAIETLQKSEGLSSQRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPVQKMDGVSGDNFSSAGQHTPNAAEQTFIAQSQHHQQFLDGSRALPEFVELDLGEAVDGVGPEDVKALQTLYREHCEAILDVVVNLQFNLIENLWQTFWRYSASSSVEGVTITENSGLSEIEGRLPRARLILLCRHEAVHKWMNTCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLTNAMSSIPPRMINTKVSAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 550
BLAST of Transcription factor RFX4 vs. Ensembl Xenopus
Match: RFX6 (regulatory factor X6 [Source:NCBI gene;Acc:100487566]) HSP 1 Score: 143.665 bits (361), Expect = 1.185e-35 Identity = 117/429 (27.27%), Postives = 205/429 (47.79%), Query Frame = 1 Query: 121 KRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIET---IKNSNNEDQL-------SQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLID------------GVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFH-----SSWENMGISFKTC----FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLE 1314 K+ T+ WL+ENY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K + K+ K + +T + + L +++ +MY+TH Q ++D+ I+G+F+EI +LL FW+ P+H L E ++ID + ID+ +Y+ VY F H L L + +F ++ + +S+ + + L EKK+ A F HL +I P L ++++ + + + + + +I + + S + E F+ ++LL+ + + + ++W+ ++ +S +N G S K L W+ F ++ + + L+ + FG +L+ + L+ Sbjct: 117 KKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYH-------SVYSGKGLTRFSGSKLKSEGGFTRKYSLSSKTGTLLPEFPSAQHLVLQGCISKEKVDTLIMMYKTHCQCVLDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPIIIDIFCVCDSILYKVRSLLIDI-MYIIVYLFYFIYKMHFLLVSLLADIRNFAKHWEQWVVSSLENLPESLSEKKLPIARRFVSSLKRQTSFLHLAQIARPALFDQNVVNSMTSDIEKVDLCSIGSQAL-LTSCSGADSDCDVYTELFQELKDLLKKNATVESFIEWLDNVVEQKVIKASKQN-GKSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLD 535
BLAST of Transcription factor RFX4 vs. Ensembl Xenopus
Match: sstr2 (somatostatin receptor 2 [Source:Xenbase;Acc:XB-GENE-953419]) HSP 1 Score: 132.494 bits (332), Expect = 2.768e-32 Identity = 106/378 (28.04%), Postives = 194/378 (51.32%), Query Frame = 1 Query: 274 KIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWENMGI----SFKTC----FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESM 1338 +IIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K + +N + K V P+ + +K+ N L +E I F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I +++ ++ S + +LI + + F++LLE + + W+ + N+ S K L W+ F ++ +++M L + FG +L+ L + L+ ES+ Sbjct: 18 QIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPEFPNVKDLNLPSSLPEEKISTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSKRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQSLYTIEDSR-EEHRKLIIQLYLEFDHLLEEQSPIESYIDWLDSMVDRCVVNVASKKQGSLKKVAQQFLLIWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 384
BLAST of Transcription factor RFX4 vs. Ensembl Xenopus
Match: sstr2 (somatostatin receptor 2 [Source:Xenbase;Acc:XB-GENE-953419]) HSP 1 Score: 132.494 bits (332), Expect = 3.296e-32 Identity = 106/378 (28.04%), Postives = 194/378 (51.32%), Query Frame = 1 Query: 274 KIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWENMGI----SFKTC----FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESM 1338 +IIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K + +N + K V P+ + +K+ N L +E I F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I +++ ++ S + +LI + + F++LLE + + W+ + N+ S K L W+ F ++ +++M L + FG +L+ L + L+ ES+ Sbjct: 36 QIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPEFPNVKDLNLPSSLPEEKISTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSKRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQSLYTIEDSR-EEHRKLIIQLYLEFDHLLEEQSPIESYIDWLDSMVDRCVVNVASKKQGSLKKVAQQFLLIWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 402
BLAST of Transcription factor RFX4 vs. Ensembl Xenopus
Match: rfx3 (regulatory factor X3 [Source:NCBI gene;Acc:779608]) HSP 1 Score: 108.997 bits (271), Expect = 1.674e-24 Identity = 92/381 (24.15%), Postives = 161/381 (42.26%), Query Frame = 1 Query: 73 IGYQIPKMTDADGESTKRDSLHRT-ISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNF--------------------------NNIGDIDPYSQKTSPSL------NVQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPE------------HFKHLFEKSLLI---------DGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ 1053 I I + +DG S+ R SL + + WL +NY EGVSL R TLY +Y C+ H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ VK S + +GD S ++ S+ QH + +D+ + E +S + ++I + +Y+ H + I+D +++ F I K +FW+ P + KS LI + D +Y ++ ++ + +P + +F + LS+++ I + + + K+ F Q + +HL + VL +T I+++L + + N+ + + Q Sbjct: 129 IEMAIETLQKSDGLSSHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVGDGFAGSGQSGASVEQTVIAQSQHHQQFLDASRALPEFAEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSSPADGSTITESGEIESRLPKSKLILFCKNESIVKWMCNCDHMMYQSLVEILIPDVLRPIPSALTQAVRNFAKSLEGWLSSAMSNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLNDLNRVDFANVQEQASWVCQ 509
BLAST of Transcription factor RFX4 vs. Ensembl Xenopus
Match: rfx3 (regulatory factor X3 [Source:NCBI gene;Acc:779608]) HSP 1 Score: 107.842 bits (268), Expect = 3.145e-24 Identity = 86/353 (24.36%), Postives = 151/353 (42.78%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNF--------------------------NNIGDIDPYSQKTSPSL------NVQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLF--------EKSLLI---------DGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ 1053 T+ WL +NY EGVSL R TLY +Y C+ H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ VK S + +GD S ++ S+ QH + +D+ + E +S + ++I + +Y+ H + I+D +++ F I K +FW+ P +F KS LI + D +Y ++ ++ + +P + +F + LS+++ I + + + K+ F Q + +HL + VL +T I+++L + + N+ + + Q Sbjct: 104 TLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVGDGFAGSGQSGASVEQTVIAQSQHHQQFLDASRALPEFAEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSSPNSIFTIEIESRLPKSKLILFCKNESIVKWMCNCDHMMYQSLVEILIPDVLRPIPSALTQAVRNFAKSLEGWLSSAMSNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLNDLNRVDFANVQEQASWVCQ 456
BLAST of Transcription factor RFX4 vs. Ensembl Mouse
Match: Rfx4 (regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]) HSP 1 Score: 173.326 bits (438), Expect = 3.927e-46 Identity = 123/419 (29.36%), Postives = 220/419 (52.51%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQK----TSPSLNVQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWV-----KDIFHSSWENMGISFKTC---FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFL 1305 ++K S T+ WL+ENY EGV + R LY +Y FC + ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K S + + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S + +LI + ++ F++LLE + ++W+ + + + + G K L W+ F ++ +++M L + FG +L+ L Sbjct: 51 RASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVSETGKREVTKQTVAYSPRSKLGTLLPDFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLSSITKQTLYTMEDSR-DEHRRLIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHL 458
BLAST of Transcription factor RFX4 vs. Ensembl Mouse
Match: Rfx6 (regulatory factor X, 6 [Source:MGI Symbol;Acc:MGI:2445208]) HSP 1 Score: 150.984 bits (380), Expect = 2.839e-38 Identity = 96/317 (30.28%), Postives = 159/317 (50.16%), Query Frame = 1 Query: 121 KRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIET---IKNSNNEDQL-------SQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKI-----FYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENI 1026 K+ T+ WL++NY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K + KN K + +T + + L ++ +MY+TH Q I+D+ I+G+F+EI +LL FW+ P+H L E ++ID D +Y + ++ + +P+ L + +F N+ + +S+ + + L +KKI F + + +Q F HL +I P L +++ ++ + + + + +I Sbjct: 116 KKKQTQLTLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYH-------SVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALIDKKIPILRRFVSSLKRQTSF-----LHLAQIARPALFDQHVVNAMVSDIEKVDLNSI 420
BLAST of Transcription factor RFX4 vs. Ensembl Mouse
Match: Rfx6 (regulatory factor X, 6 [Source:MGI Symbol;Acc:MGI:2445208]) HSP 1 Score: 115.161 bits (287), Expect = 1.907e-26 Identity = 70/195 (35.90%), Postives = 102/195 (52.31%), Query Frame = 1 Query: 121 KRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIET---IKNSNNEDQL-------SQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLL--SFWKTCPEHF 669 K+ T+ WL++NY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K + KN K + +T + + L ++ +MY+TH Q I+D+ I+G+F+E+L +L + + PE F Sbjct: 116 KKKQTQLTLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYH-------SVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEVLTDVLIPATMQEMPESF 303
BLAST of Transcription factor RFX4 vs. Ensembl Mouse
Match: Rfx3 (regulatory factor X, 3 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:106582]) HSP 1 Score: 109.383 bits (272), Expect = 1.069e-24 Identity = 98/387 (25.32%), Postives = 164/387 (42.38%), Query Frame = 1 Query: 73 IGYQIPKMTDADGESTKRDSLHRT-ISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQH--PKNRVDSVP--------KIQFTIE--TIKNSNNEDQLS-----------------------QEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWK---TCPEHFKHLFEKSLLID--------GVITI-------------DLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ 1053 I I + +DG ST R SL + + WL +NY EGVSL R TLY +Y C+ H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ VK S D+ + + P Q P +VD V + ++E I S + Q ++I + +Y+ H + I+D +++ F I K +FW+ + P + E S L + +IT+ D +Y A+ ++ + +P + +F + LSN++ I + + + K+ F Q + +HL + VL +T I+++L + + N+ + + Q Sbjct: 159 IEMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQE--DMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPADGTTITESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
BLAST of Transcription factor RFX4 vs. Ensembl Mouse
Match: Rfx3 (regulatory factor X, 3 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:106582]) HSP 1 Score: 109.383 bits (272), Expect = 1.069e-24 Identity = 98/387 (25.32%), Postives = 164/387 (42.38%), Query Frame = 1 Query: 73 IGYQIPKMTDADGESTKRDSLHRT-ISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQH--PKNRVDSVP--------KIQFTIE--TIKNSNNEDQLS-----------------------QEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWK---TCPEHFKHLFEKSLLID--------GVITI-------------DLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ 1053 I I + +DG ST R SL + + WL +NY EGVSL R TLY +Y C+ H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ VK S D+ + + P Q P +VD V + ++E I S + Q ++I + +Y+ H + I+D +++ F I K +FW+ + P + E S L + +IT+ D +Y A+ ++ + +P + +F + LSN++ I + + + K+ F Q + +HL + VL +T I+++L + + N+ + + Q Sbjct: 159 IEMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQE--DMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPADGTTITESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
BLAST of Transcription factor RFX4 vs. UniProt/SwissProt
Match: sp|A2BGA0|RFX4_DANRE (Transcription factor RFX4 OS=Danio rerio OX=7955 GN=rfx4 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.300e-45 Identity = 127/435 (29.20%), Postives = 224/435 (51.49%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFH-----------SSWENMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESM 1338 ++K S T+ WL+ENY EGV + R LY +Y FC ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K + +N + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S Q +LI + ++ F+ LLE + ++W+ + S + + F L W+ F ++ +++M L + FG +L+ L + L+ ES+ Sbjct: 51 RASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPDFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSREDQR-RLIIQLYQEFDRLLEDQSPIEAYIEWLDSMVERCVVRVAGKRPGSLKRVAQQF---LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 471
BLAST of Transcription factor RFX4 vs. UniProt/SwissProt
Match: sp|Q33E94|RFX4_HUMAN (Transcription factor RFX4 OS=Homo sapiens OX=9606 GN=RFX4 PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 1.757e-45 Identity = 134/475 (28.21%), Postives = 240/475 (50.53%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQK----TSPSLNVQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWV-----KDIFHSSWENMGISFKTC---FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESMIQEFEHLIQTLNRIIYSETSLN--YSQCIQLNSTSPHPLPCKT 1461 ++K S T+ WL+ENY EGV + R LY +Y FC + ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K S + + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S + +LI + ++ F++LLE + ++W+ + + + + G K L W+ F ++ +++M L + FG +L+ L + L+ ES+ + L R + E S + I + +P P P + Sbjct: 51 RASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRD-EHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL--HCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPS 512
BLAST of Transcription factor RFX4 vs. UniProt/SwissProt
Match: sp|Q7TNK1|RFX4_MOUSE (Transcription factor RFX4 OS=Mus musculus OX=10090 GN=Rfx4 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.747e-45 Identity = 123/419 (29.36%), Postives = 220/419 (52.51%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQK----TSPSLNVQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWV-----KDIFHSSWENMGISFKTC---FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFL 1305 ++K S T+ WL+ENY EGV + R LY +Y FC + ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K S + + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S + +LI + ++ F++LLE + ++W+ + + + + G K L W+ F ++ +++M L + FG +L+ L Sbjct: 51 RASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVSETGKREVTKQTVAYSPRSKLGTLLPDFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLSSITKQTLYTMEDSR-DEHRRLIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHL 458
BLAST of Transcription factor RFX4 vs. UniProt/SwissProt
Match: sp|Q8HWS3|RFX6_HUMAN (DNA-binding protein RFX6 OS=Homo sapiens OX=9606 GN=RFX6 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 3.039e-38 Identity = 116/427 (27.17%), Postives = 206/427 (48.24%), Query Frame = 1 Query: 121 KRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIET---IKNSNNEDQL-------SQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKI-----FYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXX-----XXXXXXXXXXXXXXKWV-----KDIFHSSWENMGISFKTC----FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLE 1314 K+ T+ WL+ENY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K + KN K + +T + + L ++ +MY+TH Q I+D+ I+G+F+EI +LL FW+ P+H L E ++ID D +Y + ++ + +P+ L + +F N+ + +S+ + + L +KKI F + + +Q F HL +I P L +++ ++ + + + + +I + + S + + EH ++LL+ + + + ++W+ + + +S +N G S K L W+ F ++ + + L+ + FG +L+ + L+ Sbjct: 117 KKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYH-------SVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRRFVSSLKRQTSF-----LHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTISGSTDTES-GIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQN-GRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLD 529
BLAST of Transcription factor RFX4 vs. UniProt/SwissProt
Match: sp|Q5RJA1|RFX6_DANRE (DNA-binding protein RFX6 OS=Danio rerio OX=7955 GN=rfx6 PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 3.477e-38 Identity = 95/312 (30.45%), Postives = 158/312 (50.64%), Query Frame = 1 Query: 121 KRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIET---------IKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENI 1026 K+ T+ WL++NY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K + KN K + +T ++ +D +S+E + +MY+TH Q I+D+ I+ +F+EI +LL FW+ PEH L E +++D D +Y + ++ + +P+ L + +F ++ + +S+ + ++L EKK+ A F HL +I P L +++ ++ + + + +I Sbjct: 49 KKKQTQLTLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLDPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYH-------SVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVLQDSVSKEKVDTLIMMYKTHCQCILDNAINVNFEEIQNFLLHFWQGMPEHLLPLLENPVIVDIFCVCDSILYKVLTDVLIPATMQDMPESLLADIRNFAKHWEHWMLSSLENLPEILSEKKVPIARRFVSSLKRQTSFLHLAQIARPALFDQIVVTSMVNDIDKVDLNSI 353
BLAST of Transcription factor RFX4 vs. TrEMBL
Match: V4B1B6 (RFX-type winged-helix domain-containing protein (Fragment) OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_113173 PE=4 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 2.761e-47 Identity = 122/436 (27.98%), Postives = 223/436 (51.15%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNF----NNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTV----------HIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWV-----KDIFHSSWENMGISFKTC---FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESM 1338 +K S T+ WL+ENY EGV + R TLY +Y FC + + I+ A+FGKIIRQQFPQITTRRLGTRG SKYHY+G+ V+++S Y++ I ++ S + P++++ ++ ++ IK N ++ +++ F +MY+TH Q+I+D++I +FDE+ +L+ FW+ P H + + S ++ V D +Y AV ++ ++ +LP+ Q ++ F L+ + ++ N++P LR K A F Q+ +HL + V+ +D+ S++L+++ I + +II T+ H++ + + +L+ E + + ++W+ K + S + G K L W+ F ++ +++M L + FG +L+ L + L+ ES+ Sbjct: 1 RGSKPHSTPLTLKWLEENYEIAEGVCIPRSTLYLHYLDFCERNDSNPINAASFGKIIRQQFPQITTRRLGTRGQSKYHYYGIGVRETSSYYDIMYSSKGIQSAGDGKKECSKQVIAYSPRSKLGTLLPDFPSVREIKIPANIEE--EKVSTFLVMYRTHCQRILDTVIRANFDEVQNFLMHFWQGMPSHIVPILDSSTIVMLVGVCDSILYKAVSSVLMPTVLQALPESLTQVIRRFAKQLDEWLMLALNNLP---DTLRRVKFDLARRFSQVLRRQTSLNHLCQAARTVIHSSDITSQMLDDWLNIDLNSIIKQTLYTMDQYTDKDHMIIVNLCSEFEKLLEEQ-----------SAIECYIEWLDNMVDKCVVQPSSKKPGTLRKIARQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLLHLMFDDYVLYLVESL 420
BLAST of Transcription factor RFX4 vs. TrEMBL
Match: K1QV89 (Transcription factor RFX4 OS=Crassostrea gigas OX=29159 GN=CGI_10018775 PE=4 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 8.529e-47 Identity = 127/430 (29.53%), Postives = 219/430 (50.93%), Query Frame = 1 Query: 118 TKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN-----------VQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ---SSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWENMGISFKTC----FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESM 1338 +K S T+ WL+ENY E V + R TLY +Y +C ++ ++ A+FGKIIRQQFPQITTRRLGTRG SKYHY+G+ V+++S YF YS K +PS N P++++ ++ I+ IK +D ++ F +MY+TH Q+I+D++I +FDE+ +LL FW+ PEH + + + V D +Y A+ ++ S+ +LPD Q +K F L+ + + +S+P+ +RE K A F Q+ + +HL + V+ + D+ +++LE++ + + II T++ ++ + + L E + ++ L + L + V +N S + L W+ F ++ +++M L S FG +L+ L + LF E++ Sbjct: 67 SKSHSTPSTLKWLEENYEIAEAVCIPRSTLYCHYLDYCETNDTQPVNAASFGKIIRQQFPQITTRRLGTRGQSKYHYYGIGVRETSKYFE-------TVYSAKGTPSSNEGKKETVKQIVAYSPRSKLGTLLPDFPDIKDIKLP--DDVPEDKVLTFMMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPEHMMAILDSQTTVLLVGVCDTMLYKAIANVLMPSVLQALPDSLIQVIKNFSQQLDEWLKVALDSLPSG---IREVKFDLARRFSQILRRQISLNHLCQAARSVVHNPDISAQMLEDWISVDLSGIIKQTMYTMERYREKVMETIVNLCNEFEQLLDDQAPLQSYTEWLDRMVDRCVVQFAKNRPGSLRRTARQFLLMWSCFCTRIIRDMTLHSSPSFGSFHLLHLMFDDYVLFLVENL 484
BLAST of Transcription factor RFX4 vs. TrEMBL
Match: A0A5A9NZQ5 (Transcription factor RFX4 OS=Triplophysa tibetana OX=1572043 GN=E1301_Tti008869 PE=4 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.138e-46 Identity = 136/486 (27.98%), Postives = 242/486 (49.79%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWENMGISFKTC--------FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESMIQEFEHLIQTLNRIIYS----ETSLNYSQCIQLNSTSPHPL---PCKTEIELHN 1479 ++K S T+ WL+ENY EGV + R LY +Y FC H ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K + +N + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S++++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S Q LI + ++ F+ LLE + ++W+ + + C L W+ F ++ +++M L + FG +L+ L + L+ ES+ H + N ++ S + + + L ++P P PC +H+ Sbjct: 51 RASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDSQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEEKVATFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSIVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLP---ENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSREDQR-GLIVQLYQEFDRLLEDQSPIEAYIEWLDSMVERCVVRVAGKRPGCLKRLAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL-----HCQERANELMRSMKGEGAPADTGEELMLMGSTPTPTSPEPCSPAKSIHS 520
BLAST of Transcription factor RFX4 vs. TrEMBL
Match: W5LLN7 (Regulatory factor X, 4 OS=Astyanax mexicanus OX=7994 PE=4 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 1.231e-46 Identity = 137/483 (28.36%), Postives = 245/483 (50.72%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWENMGISFKTC--------FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESMIQEFEHLIQTLNRIIYSETSL-NYSQCIQLNSTSP---HPLPCKTEIELHN 1479 +++KR S T+ WL+ENY EGV + R LY +Y FC H ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K + +N + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S Q +LI + ++ F+ LLE + ++W+ + + C L W+ F ++ +++M L + FG +L+ L + L+ ES+ + L R + E ++ + + + L T+P P+P +H+ Sbjct: 51 QASKRHSTPATLEWLEENYEITEGVCIPRSALYMHYLDFCEKHDSQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPEFPNVKDLNLPAALPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLSSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKMALHDLP---ENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSQEDQR-RLIIQLYQEFDRLLEDQSPIEAYIEWLDSMVDRCVVRVAGKRPGCLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL--HCQERANELMRAMKGEGTVGDTDENMMLTETTPTSLSPVPYSPAKSVHS 520
BLAST of Transcription factor RFX4 vs. TrEMBL
Match: A0A2D0QQJ6 (transcription factor RFX4 isoform X2 OS=Ictalurus punctatus OX=7998 GN=rfx4 PE=4 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 2.036e-46 Identity = 134/443 (30.25%), Postives = 229/443 (51.69%), Query Frame = 1 Query: 97 TDADGE------STKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLS-QEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKD-----IFHSSWENMGISFKTC---FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESM 1338 TD D E ++KR S T+ WL+ENY EGV + R LY +Y FC H ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+GLAVK+SS Y++ YS+K +N + K V P+ + +K+ N L Q++ F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S Q +LI + ++ F+ LLE + ++W+ + + + G K L W+ F ++ +++M L + FG +L+ L + L+ ES+ Sbjct: 41 TDTDNEEKENNRASKRHSTPATLQWLEENYEIAEGVCVPRSALYMHYLDFCEKHGTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGLAVKESSQYYDVM-------YSKKGGAWVNETGKKEVTKQTVAYSPRSKLGTLLPEFPNVKDLNLPAILPEQKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLRVALHDLP---ENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSREDQR-RLIIQLYQEFDRLLEDQSPIEAYIEWLDSMVDRCVVRVAGKRPGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 472
BLAST of Transcription factor RFX4 vs. Ensembl Cavefish
Match: rfx4 (regulatory factor X, 4 [Source:NCBI gene;Acc:403016]) HSP 1 Score: 184.111 bits (466), Expect = 4.661e-50 Identity = 137/483 (28.36%), Postives = 245/483 (50.72%), Query Frame = 1 Query: 112 ESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWENMGISFKTC--------FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEH--LFYTESMIQEFEHLIQTLNRIIYSETSL-NYSQCIQLNSTSP---HPLPCKTEIELHN 1479 +++KR S T+ WL+ENY EGV + R LY +Y FC H ++ A+FGKIIRQQFPQ+TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K + +N + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + S +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + + + +P + LR K + F Q+ +HL + V+ D+ ++LE+++ + + +I T++ ++ S Q +LI + ++ F+ LLE + ++W+ + + C L W+ F ++ +++M L + FG +L+ L + L+ ES+ + L R + E ++ + + + L T+P P+P +H+ Sbjct: 51 QASKRHSTPATLEWLEENYEITEGVCIPRSALYMHYLDFCEKHDSQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVM-------YSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPEFPNVKDLNLPAALPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLSSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKMALHDLP---ENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSQEDQR-RLIIQLYQEFDRLLEDQSPIEAYIEWLDSMVDRCVVRVAGKRPGCLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL--HCQERANELMRAMKGEGTVGDTDENMMLTETTPTSLSPVPYSPAKSVHS 520
BLAST of Transcription factor RFX4 vs. Ensembl Cavefish
Match: rfx6 (regulatory factor X, 6 [Source:NCBI gene;Acc:556925]) HSP 1 Score: 108.997 bits (271), Expect = 1.192e-24 Identity = 84/315 (26.67%), Postives = 139/315 (44.13%), Query Frame = 1 Query: 121 KRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVK------------KSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENI 1026 K+ T+ WL+ENY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K K F+ + + + +++K S S + P Q + +D +S+E + +MY+TH Q I+D+ I +F+E+ L D +I +Q +P+ L + +F ++ + +S+ + +L EKK+ A F HL +I P L ++++ ++ + + + +I Sbjct: 45 KKKQTQLTLLWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLDPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSSYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKT---GTLLPEFPSAQHLVL-------DDSVSKEKVDTLIMMYKTHCQCILDNAISVNFEEV-----------------------LTDVLIPATMQ---------------DMPESLLADIRNFAKHWEHWMVSSLENLPDVLSEKKLPIARRFVSSLKRQTSFLHLAQIARPALFDQNVVTSMVNDIDKVDLNSI 311
BLAST of Transcription factor RFX4 vs. Ensembl Cavefish
Match: rfx3 (regulatory factor X3 [Source:NCBI gene;Acc:103029090]) HSP 1 Score: 103.219 bits (256), Expect = 8.520e-23 Identity = 92/386 (23.83%), Postives = 161/386 (41.71%), Query Frame = 1 Query: 85 IPKMTDADGESTKRDSLHRT-ISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNN---------------------------IGDIDPYSQKTSPS-------LNVQHPKNRVDSVPKI-QFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLI--DGVITI-------------------------DLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ 1053 I + +G S++R +L + + WL +NY +GVSL R TLY +Y C+ ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ VK S GD P S + +P+ QH + +D+ + +F + ED ++I +Y+ H + I+D +++ F I K +FW+ P + E + +I GV I D +Y A+ ++ + +P + +F + L+N++ AI + + + K+ F Q + +HL + VL +T I+++L + + N+ + + Q Sbjct: 161 IETLQKTEGLSSQRSALLNSHLQWLLDNYETADGVSLPRSTLYSHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMALRQQPVQQKQRYKPVQKMDGFSGDNYPSSGQHTPNAAEQTVIAQSQHHQQFLDASRALPEFVELDLGEHGVEDVSMEDIKALQTLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSP---SNTIEGATIIQNSGVSEIEGRLPRARLLLLCRSEAVLKWMSACDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLTNAMSAIPQKMIQTKVSTVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFVNVQEQASWVCQ 543
BLAST of Transcription factor RFX4 vs. Ensembl Cavefish
Match: rfx3 (regulatory factor X3 [Source:NCBI gene;Acc:103029090]) HSP 1 Score: 101.679 bits (252), Expect = 2.898e-22 Identity = 88/366 (24.04%), Postives = 151/366 (41.26%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNN---------------------------IGDIDPYSQKTSPS-------LNVQHPKNRVDSVPKI-QFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLI--DGVITI-------------------------DLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ 1053 T+ WL +NY +GVSL R TLY +Y C+ ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ VK S GD P S + +P+ QH + +D+ + +F + ED ++I +Y+ H + I+D +++ F I K +FW+ P + E + +I GV I D +Y A+ ++ + +P + +F + L+N++ AI + + + K+ F Q + +HL + VL +T I+++L + + N+ + + Q Sbjct: 156 TLQWLLDNYETADGVSLPRSTLYSHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMALRQQPVQQKQRYKPVQKMDGFSGDNYPSSGQHTPNAAEQTVIAQSQHHQQFLDASRALPEFVELDLGEHGVEDVSMEDIKALQTLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSP---SNTIEGATIIQNSGVSEIEGRLPRARLLLLCRSEAVLKWMSACDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLTNAMSAIPQKMIQTKVSTVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFVNVQEQASWVCQ 518
BLAST of Transcription factor RFX4 vs. Ensembl Cavefish
Match: rfx1b (regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]) HSP 1 Score: 87.0409 bits (214), Expect = 1.381e-17 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSS 375 T+ WL +NY EGVSL R TLY +Y C+ ++ A+FGK+IR F + TRRLGTRGNSKYHY+GL +K SS Sbjct: 294 TVQWLCDNYETAEGVSLPRCTLYCHYLLHCQEAKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKYHYYGLRIKSSS 371
BLAST of Transcription factor RFX4 vs. Ensembl Sea Lamprey
Match: rfx2 (regulatory factor X, 2 (influences HLA class II expression) [Source:NCBI gene;Acc:503590]) HSP 1 Score: 90.8929 bits (224), Expect = 1.304e-19 Identity = 79/338 (23.37%), Postives = 139/338 (41.12%), Query Frame = 1 Query: 133 LHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQ-KTSPSLNVQH--PKNRVDSVPKIQ-----------FTIETIKNSNNEDQLS---------------------QEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCP----------EHFKHLFEKSLLIDGVITI-------------DLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHT 972 L+ + WL +NY EGVSL R TLY +Y C+ ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K SS N + D ++ + P + Q P + D V + Q +T ++ D + + +Y+ H + I+D +++ F I +FW+ P +H ++ +EK L + T+ D +Y A+ ++ + +P + +F + L+ ++ + + + K+ F Q + +HL + VL +T Sbjct: 182 LNHHVQWLIDNYETAEGVSLPRCTLYNHYLRHCQEQKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKYHYYGIRIKASS---PLNRMQDDHQHAALRQQPLIQKQRFKPTAKADGVGEAQGVGPHGSAEQALVAQTQQHQQFLDASRALPAFAEVEWGDITFPPGVSIEHVRTLQTLYREHCEAILDIVVNLQFGLIETIWQTFWRYSPPDDDDTSMDVQHRENGYEKRLPKGALATLCRWEPVMKWMRSCDYLLYQALVEVLIPDVLRPIPSALTQAIRNFAKSLEGWLATALSGLPQEVIHAKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNT 516
BLAST of Transcription factor RFX4 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005569.1 (pep scaffold:Pmarinus_7.0:GL484170:9855:13247:-1 gene:ENSPMAG00000005066.1 transcript:ENSPMAT00000005569.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 60.077 bits (144), Expect = 7.474e-11 Identity = 30/86 (34.88%), Postives = 49/86 (56.98%), Query Frame = 1 Query: 115 STKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYH--YHGLAVK 366 + R + SW++++ SL ++ +Y+ Y+ +C + + +S A FGK+++ FP + RRLGTRGNSKY Y GL K Sbjct: 7 TANRTDQMQAFSWIRQHLEEHNDTSLPKQEVYDEYKGYCENLGHRFLSAADFGKLMKNVFPNMKARRLGTRGNSKYPCCYSGLRKK 92
BLAST of Transcription factor RFX4 vs. Ensembl Yeast
Match: RFX1 (Major transcriptional repressor of DNA-damage-regulated genes; recruits repressors Tup1p and Cyc8p to their promoters; involved in DNA damage and replication checkpoint pathway; similar to a family of mammalian DNA binding RFX1-4 proteins [Source:SGD;Acc:S000004166]) HSP 1 Score: 67.0106 bits (162), Expect = 3.368e-12 Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 1 Query: 151 WLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAV---KKSSVYFNFNN 396 WL +N + R ++ Y S C + +S A+ GK+IR FP +TTRRLG RG SKYHY GL + + SV N NN Sbjct: 288 WLMKNCKSQHDSYVPRGKIFAQYASSCSQNNLKPLSQASLGKLIRTVFPDLTTRRLGMRGQSKYHYCGLKLTVNESGSVSLNNNN 372
BLAST of Transcription factor RFX4 vs. Ensembl Nematostella
Match: EDO39490 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9V5]) HSP 1 Score: 160.999 bits (406), Expect = 1.960e-44 Identity = 118/405 (29.14%), Postives = 195/405 (48.15%), Query Frame = 1 Query: 154 LKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSN------NEDQLS-------QEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWV-----KDIFHSSWENMGISF---KTCFLT-WTIFFSKFLQEMFLSLSKCFGQVNLVF 1302 + ENY EG+ L R +Y +Y FC+ + + ATFGKIIRQ+FP++TTRRLGTRG SKYHY+G+ V +SS YF+ YS++ + PKN + K +F++ K N +L Q++ F +MY+TH Q+I+D++I +FD + ++ FW+ P H K + + S+L+D + D +Y + ++ S LPD +E F N L+ S+ + + K+ A F + HL + VL D +S ++++ + I + I+ I + + P+ I + + FENLL + +W+ + I EN G F FL W++F +K L+++ L + FG+ F Sbjct: 1 MGENYELKEGMCLPRCVMYTHYLDFCKKNKLNPAGPATFGKIIRQKFPKLTTRRLGTRGQSKYHYYGIQVSESSPYFHSG-------YSKQGLTRFSTMKPKNEGEIATKSKFSLGGSKTRTLLPEFPNAQKLDLPKGVSLQKVETFIMMYRTHCQRILDTVISANFDGVQSFVCHFWQGMPIHMKSVLQCSVLVDVIAICDSILYKVLIDVLIPSSIQDLPDSLREEIREFAVNLLEWLNESLTDVPSTVHAAKVKVARTFGNALTRQVSFVHLAQTARSVLLSYDSVSRMMDDLRKIDWKGIMSQITFITGNM---EFPEKIKTYIQEFENLLTKQAPLEAYTEWLDSTVDRCILKPCKEN-GAKFDEKSAKFLGLWSLFTTKLLEDLTLRSAPSFGKEARTF 394
BLAST of Transcription factor RFX4 vs. Ensembl Nematostella
Match: EDO35375 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLM7]) HSP 1 Score: 152.525 bits (384), Expect = 3.880e-41 Identity = 111/404 (27.48%), Postives = 192/404 (47.52%), Query Frame = 1 Query: 154 LKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNF--------NNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFH----SSWENMGISFKTC----FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLE 1314 L ENY +GVSL R LY +Y FC + S ++ A+FGKIIR FP + TRRLGTRG SKYHY+G+ +K +S Y + ++ + +Q +S SL V + S P ++ + N ++S++ + F IMY+ H Q+I+D+I+ +F E+ +L+ FW+ P H + S ++D + D +Y A+ ++ LP + HF L S+ + L+++K+ A F +HL + VL + ++++L++++ I E I + S + + I E F LL+ + D+ +W + E G S++ C L W+ F + ++E+ L + FG +L+ + LE Sbjct: 1 LNENYEVADGVSLPRSALYSHYLDFCEKNSLSPVNAASFGKIIRHTFPNLKTRRLGTRGQSKYHYYGITIKTTSPYHDTVCNAARQSSSGHSVTKSAQGSSSSLIVAPGGTLLPSFP-------SVNHLNLPAEVSRDKVKTFLIMYRAHCQRILDTILRANFGEVQNFLVHFWQGMPSHMLEVLGCSDVVDLIGVCDGILYKAISGVLIPGTLQPLPASLTQAIRHFAKQLGRWLEESLAHLPAPLQQRKLSVAKSFAHSLRRQTSLTHLAQAARTVLHSAEPVTQMLQDWKQIDFEGIARQAMWTF-SQNVEKDYAKIKEIHTEFTQLLDQQATIDQYAEWASSLVDRCVTKRVEKEGSSYQKCAQDFLLKWSFFSIRIVRELTLHSAHSFGSFHLLHMLLE 396
BLAST of Transcription factor RFX4 vs. Ensembl Nematostella
Match: EDO47852 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RL05]) HSP 1 Score: 149.058 bits (375), Expect = 7.192e-40 Identity = 113/405 (27.90%), Postives = 190/405 (46.91%), Query Frame = 1 Query: 154 LKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSNNED-----------QLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWV--------KDIFHSSWENMGISFKTC----FLTWTIFFSKFLQEMFLSLSKCFGQVNL 1296 + ENY EGV L R LY +Y FCR H ATFGK IRQ+FPQ+TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K + KN + + ++++ + + D +SQE + F IMY+TH Q I+D+ I+ +FDEI +LL FW+ P+H L + ++ D V D +Y + +L S +P+ L + F + + ++++ + + ++ K+ F Q HL + PVL+ +L+ +++ + + + T++ + + EH E EL + + +V + + S E+ G+ FK L W+ ++ + + L+ S CFG L Sbjct: 1 MDENYVMCEGVCLPRCILYAHYLDFCRRHKIEAACAATFGKTIRQKFPQLTTRRLGTRGHSKYHYYGIGIKESSAYYH-------SVYSGKGLTRFSGSKAKNEGNFAAR-KYSLSSKTGTLLPDFPNPQLLELPQGISQEKVETFVIMYKTHCQCILDTAINANFDEIKNFLLHFWQGLPDHLLPLMDTEVVSDVVCVCDSILYKVLMDVLLPSSMQDVPEGLLADIRSFARHLEVWVASATEELPEYVKLAKLQIVRRFAQSIRRQTSFLHLAQTARPVLNSAELLEQMICDLDKVDNSSAGSQTLYDKTENETDEGLDRECEHVVFMEEFRELLANQSCVESYVEWLDKTVEQKVIQSCVES-GLEFKNRAQEFLLRWSFLGARLMHSLTLNASSCFGMSAL 396
BLAST of Transcription factor RFX4 vs. Ensembl Nematostella
Match: EDO43982 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RX75]) HSP 1 Score: 121.709 bits (304), Expect = 1.053e-29 Identity = 109/468 (23.29%), Postives = 198/468 (42.31%), Query Frame = 1 Query: 145 ISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQ-HPKNRVDSVPKIQ-FTIETIKNSNN----------------------------------EDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWK-------------TCPEHFKHLF-----EKSL-------------LIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIF------HSSWENMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLV-FLWLEHLFY 1326 + WL ENY EGVSL R TLY +Y + C++H ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K SS N + D + + SPS + P +RVD V + + + N ++ E L +++ F MY+ H + +D +++ F + SFW+ T K L EK L ++ V + D +Y + ++ + +P + +F L+ S+ ++ K + + K+ F Q + +HL + VL +T I+++L + + N+ + + Q ++Y ++F+ L+ S ++ W++ + H EN + + L W+ + S ++++ L + FG +L+ L+ E++FY Sbjct: 1 MQWLLENYETAEGVSLPRSTLYNHYLTHCQTHKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKYHYYGIRIKPSS---PLNALTDDAQVALRQSPSTQKRLKPASRVDGVEGVDGYPSQGGTNVDSAQQSQHQQHQQYLGDITQGLPDFEDLDPKGTPLPEGVLEEDLDTFQDMYREHCEAFLDVVVNLQFALVESLWQSFWRHPSTTDVKREEPSTPTSGIKELGDDEDNEKRLPKVKLAILCEYEPVVAYVKSCDHLLYQTLVEVLIPDVLRPIPSSLTQAIRNFAKGLEGWLAGSLSSVPKKMADVKVSSCCAFAQTLRRYTSLNHLAQAARAVLQNTSQITQMLNDLNRVDFANVQEQAAWVCQCDD-----HMVYRFEQDFKLTLQQQNSLEQWATWLEGVVDQFLKPHEGSENYPKAARQFLLKWSFYSSMIIRDLTLRSAASFGSFHLIRLLYDEYMFY 460
BLAST of Transcription factor RFX4 vs. Ensembl Nematostella
Match: EDO41435 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S491]) HSP 1 Score: 64.3142 bits (155), Expect = 7.893e-12 Identity = 35/90 (38.89%), Postives = 52/90 (57.78%), Query Frame = 1 Query: 115 STKRDSLHRTISWLKENYCFVEGV----SLSRKTLYENYQSFCRSHVYSQ-ISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKK 369 ST R + W++ C +E +L + +Y+ Y+++C S S+ +S FGKII+ FP++ RRLGTRGNSKY Y G+ KK Sbjct: 39 STTRAEQTQAFHWIR---CHLEECDNSSTLPKHEVYDEYKAYCESMSASRTLSAPDFGKIIKCVFPRVKARRLGTRGNSKYCYSGIQRKK 125
BLAST of Transcription factor RFX4 vs. Ensembl Medaka
Match: rfx4 (regulatory factor X4 [Source:NCBI gene;Acc:101165053]) HSP 1 Score: 171.785 bits (434), Expect = 8.689e-46 Identity = 120/421 (28.50%), Postives = 216/421 (51.31%), Query Frame = 1 Query: 106 DGESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLN----VQHPKNRVDSVPKIQFTI-----ETIKNSNNEDQLSQE-IGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPD---QYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWENMGISFKTC--------FLTWTIFFSKFLQEMFLSLSKCFGQVNLVFL 1305 + ++K S T+ WL+ENY EGV + R LY +Y F H ++ A+FGKIIRQQFP +TTRRLGTRG SKYHY+G+AVK+SS Y++ YS+K + +N + K V P+ + +K+ N L +E + F +MY+TH Q+I+D++I +FDE+ +LL FW+ P H + +++ V D +Y A+ ++ ++ +LPD Q +++F L+ + I + +P + LR K + F Q+ +HL + V++ D+ ++LE+++ + + +I T++ ++ S + ++I + ++ F+ LLE + ++W+ + + C L W+ F ++ +++M L + FG +L+ L Sbjct: 49 NNRASKPHSTPATLEWLEENYEIAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGKIIRQQFPALTTRRLGTRGQSKYHYYGIAVKESSPYYDVM-------YSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPEFPNVKDLNLPASLPEERVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSPTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHDLP---ENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSADITFQMLEDWRNVDLNSITKQTLYTMEDSQ-EEHRRIIIQLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHL 458
BLAST of Transcription factor RFX4 vs. Ensembl Medaka
Match: rfx3 (regulatory factor X3 [Source:NCBI gene;Acc:101163751]) HSP 1 Score: 115.931 bits (289), Expect = 6.186e-27 Identity = 97/387 (25.06%), Postives = 168/387 (43.41%), Query Frame = 1 Query: 73 IGYQIPKMTDADGESTKRDSLHRT-ISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKK----------------------------------SSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIE-TIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCP----------------EHFKHLFEKSLLI----DGVI----TIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ 1053 I I + ++G S++R SL + + WL +NY EGVSL R TLY +Y C+ ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ VK SS N++ G P + + + QH + +D+ + +E + SN E+ S+++ +Y+ H + I+D +++ F I K +FW+ P E L LL+ + V+ T D +Y A+ ++ + +P + +F + L+N++ AI + + + KI F Q + +HL + VL +T I+++L + + N+ + + Q Sbjct: 150 IEMAIETLQKSEGLSSQRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMALKQQPVQQKQRFKPVQKFDSSSGENYSGGGQHHPGAAEQTVIAQSQHHQQFIDASRALPDFVELDLGQSNTENISSEDVKALQSLYREHCEAILDVVVNLQFSLIEKLWETFWRYSPPETVEGATVTENSSISEIEARLPRARLLVLCRNEAVLKWMSTCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLNNAMNAIPQRMIQTKIAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 536
BLAST of Transcription factor RFX4 vs. Ensembl Medaka
Match: rfx3 (regulatory factor X3 [Source:NCBI gene;Acc:101163751]) HSP 1 Score: 112.849 bits (281), Expect = 6.479e-26 Identity = 91/363 (25.07%), Postives = 156/363 (42.98%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKK----------------------------------SSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIE-TIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCP----------------EHFKHLFEKSLLI----DGVI----TIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQ 1053 T+ WL +NY EGVSL R TLY +Y C+ ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ VK SS N++ G P + + + QH + +D+ + +E + SN E+ S+++ +Y+ H + I+D +++ F I K +FW+ P E L LL+ + V+ T D +Y A+ ++ + +P + +F + L+N++ AI + + + KI F Q + +HL + VL +T I+++L + + N+ + + Q Sbjct: 149 TLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMALKQQPVQQKQRFKPVQKFDSSSGENYSGGGQHHPGAAEQTVIAQSQHHQQFIDASRALPDFVELDLGQSNTENISSEDVKALQSLYREHCEAILDVVVNLQFSLIEKLWETFWRYSPPETVEGATVTENSSISEIEARLPRARLLVLCRNEAVLKWMSTCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLNNAMNAIPQRMIQTKIAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 511
BLAST of Transcription factor RFX4 vs. Ensembl Medaka
Match: rfx6 (regulatory factor X6 [Source:NCBI gene;Acc:101170242]) HSP 1 Score: 110.923 bits (276), Expect = 3.336e-25 Identity = 84/307 (27.36%), Postives = 136/307 (44.30%), Query Frame = 1 Query: 121 KRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSNN---EDQLSQEIGNFFIMYQTHSQQIIDSIIHG--SFDEILKYLLSFWKT---------CPE------------HFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVL 963 K+ + T+ WL+ENY EGV L R LY +Y FCR ATFGK IRQ+FP +TTRRLGTRG+SKYHY+G+ +K+SS Y++ YS K +F+ +KN + LS + G + ++Q + ++HG S +++ + L +F T CP H L + ++++ D +Y + ++ + +P+ L + F ++ L++S+ + + L KK+ A F HL +I P L Sbjct: 34 KKKQMQLTLQWLEENYMVCEGVCLPRCILYAHYLDFCRKERLEPACAATFGKTIRQKFPLLTTRRLGTRGHSKYHYYGIGIKESSAYYHAV-------YSGKG-----------------LTRFSGSKLKNEGGFTRKYSLSSKTGTLLPDF-PNAQHL---VLHGNISREKVGRRLAAFSTTFCCSLKRPVCPSGGHSMEVHGMPNHLLPLLQTPVIVNVFCVCDSILYKVLTDVLIPATMQEMPESLLADIRSFAKHWEHWLASSLENLPECLAAKKLPIARCFVSSLKRQTSFLHLAQIARPAL 312
BLAST of Transcription factor RFX4 vs. Ensembl Medaka
Match: rfx1a (MHC class II regulatory factor RFX1 [Source:NCBI gene;Acc:101166798]) HSP 1 Score: 92.4337 bits (228), Expect = 2.683e-19 Identity = 44/90 (48.89%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 106 DGESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSS 375 +GE T S + + WL +NY EGVSL R TLY +Y C+ ++ A+FGK+IR F + TRRLGTRGNSKYHY+GL +K S Sbjct: 329 EGEETSVPSADKKVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGS 418
BLAST of Transcription factor RFX4 vs. Planmine SMEST
Match: SMESG000058756.1 (SMESG000058756.1) HSP 1 Score: 971.074 bits (2509), Expect = 0.000e+0 Identity = 490/495 (98.99%), Postives = 494/495 (99.80%), Query Frame = 1 Query: 94 MTDADGESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEKSLLIDGVITIDLQVYVAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHXXXXXXXXXXXXXXXXXXKWVKDIFHSSWENMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEHLFYTESMIQEFEHLIQTLNRIIYSETSLNYSQCIQLNSTSPHPLPCKTEIELHNNNGQSNESMFEPMEYDESRYNREIVSDCDILFM 1578 MTDADGESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFE+SLLIDGVITIDLQVY+AVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHFENFENLLELDFSFDELLKWVKDIFHSSWENMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEHLFYTESMIQEFEH+IQTLNRIIYSETSLNYSQCIQLNSTS HPLPCKTEIELHNNNGQSNESMFEPMEYDESRYNRE+VSDCDILFM Sbjct: 1 MTDADGESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQHPKNRVDSVPKIQFTIETIKNSNNEDQLSQEIGNFFIMYQTHSQQIIDSIIHGSFDEILKYLLSFWKTCPEHFKHLFEESLLIDGVITIDLQVYIAVYRFVLHSMDHSLPDQYLKEFVHFLNNYSIILSNSIPAINKLLREKKIFYALMFKQMCFSWLRGSHLYKIIFPVLSHTDLISEILEEFQGICIENIIDDTVHIVQSSAIPQMPQLIYEHFENFENLLELDFSFDELLKWVKDIFHSSWENMGISFKTCFLTWTIFFSKFLQEMFLSLSKCFGQVNLVFLWLEHLFYTESMIQEFEHIIQTLNRIIYSETSLNYSQCIQLNSTSLHPLPCKTEIELHNNNGQSNESMFEPMEYDESRYNREVVSDCDILFM 495
BLAST of Transcription factor RFX4 vs. Planmine SMEST
Match: SMESG000017202.1 (SMESG000017202.1) HSP 1 Score: 88.1965 bits (217), Expect = 5.299e-18 Identity = 44/103 (42.72%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 142 TISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIGDIDPYSQKTSPSLNVQ 450 T+ WL +NY +GVSL R TLY +Y C+ ++ A+FGK+IR F + TRRLGTRGNSKYHY+G+ +K +SV N+ + ++ + PS + Q Sbjct: 193 TMQWLYDNYETADGVSLPRSTLYNHYLQHCQQEKLEPMNQASFGKLIRSVFFGLRTRRLGTRGNSKYHYYGIRIKPNSV---LNHYVEDQTFAMRQYPSFHRQ 292
BLAST of Transcription factor RFX4 vs. Planmine SMEST
Match: SMESG000021065.1 (SMESG000021065.1) HSP 1 Score: 67.781 bits (164), Expect = 1.152e-11 Identity = 32/86 (37.21%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 145 ISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVYSQISTATFGKIIRQQFPQITTRRLGTRGNSKYHYHGLAVKKSSVYFNFNNIG 402 +S L+EN + L ++ +YE+Y+S+C ++ +STA FGK++++ FP I RRLG RG S+Y Y GL ++ + +IG Sbjct: 157 LSHLEEN----KTTCLQKQEVYEDYKSYCMTYNIKCLSTADFGKVMKKNFPNIKARRLGARGQSRYCYSGLRNRQETQSPALKDIG 238 The following BLAST results are available for this feature:
BLAST of Transcription factor RFX4 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Transcription factor RFX4 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Transcription factor RFX4 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Transcription factor RFX4 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Transcription factor RFX4 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Transcription factor RFX4 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Transcription factor RFX4 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Transcription factor RFX4 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Transcription factor RFX4 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Transcription factor RFX4 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of Transcription factor RFX4 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Transcription factor RFX4 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Transcription factor RFX4 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Transcription factor RFX4 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30032163 ID=SMED30032163|Name=Transcription factor RFX4|organism=Schmidtea mediterranea sexual|type=transcript|length=1590bpback to top protein sequence of SMED30032163-orf-1 >SMED30032163-orf-1 ID=SMED30032163-orf-1|Name=SMED30032163-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=496bp MTDADGESTKRDSLHRTISWLKENYCFVEGVSLSRKTLYENYQSFCRSHVback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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