Protocadherin
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30032108 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]) HSP 1 Score: 263.077 bits (671), Expect = 4.354e-72 Identity = 236/788 (29.95%), Postives = 368/788 (46.70%), Query Frame = 1 Query: 133 GSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETI--CAQHEMCCEEVECILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 G V +K+ EE P + +IG++ + F + K +P+L++ K GD+ + + ID E + C Q+++ + CIL+ + D + S + + V D NDN P F P T+ + EN IG + A D DA N V Y + E F L + + P LIV LD E Y T++ D + ++ L + VLD NDN P F + Y+ E+ EN P+G +I V+A D D +I Y FH+ + +R + NTG I +Q + + +F V A D+ A A + + VKD+NDN+P I T G + I + + + +QV+D D G NA V+C + R + + Y L + DYE ++ EI D G+P + SL V V D+N+ AP F + ++ EN + G I +++ASD D A L YS EP FTI P TG+I+ LDRE E E+ ++ D G TV++ VLD NDN P F+ +SG F++ EN+ + S V G + D DK E N +V ++ F QN +G IL+ DRE YT +++A D G+P SA+ TI V D+NDN P P ++ H + +T + G + ++ A D D G N+ + YS+ N LF + +G + + + + G +L ++ SD G+PPR+ + +++N Sbjct: 55 GHATRVVYKVPEEQPPNTLIGSLAADY-GFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLREC-QNQLPGDP--CILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDR-GTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKT-SLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NAQVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTS---HKL-LTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 813
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]) HSP 1 Score: 263.462 bits (672), Expect = 1.227e-71 Identity = 236/788 (29.95%), Postives = 368/788 (46.70%), Query Frame = 1 Query: 133 GSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETI--CAQHEMCCEEVECILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 G V +K+ EE P + +IG++ + F + K +P+L++ K GD+ + + ID E + C Q+++ + CIL+ + D + S + + V D NDN P F P T+ + EN IG + A D DA N V Y + E F L + + P LIV LD E Y T++ D + ++ L + VLD NDN P F + Y+ E+ EN P+G +I V+A D D +I Y FH+ + +R + NTG I +Q + + +F V A D+ A A + + VKD+NDN+P I T G + I + + + +QV+D D G NA V+C + R + + Y L + DYE ++ EI D G+P + SL V V D+N+ AP F + ++ EN + G I +++ASD D A L YS EP FTI P TG+I+ LDRE E E+ ++ D G TV++ VLD NDN P F+ +SG F++ EN+ + S V G + D DK E N +V ++ F QN +G IL+ DRE YT +++A D G+P SA+ TI V D+NDN P P ++ H + +T + G + ++ A D D G N+ + YS+ N LF + +G + + + + G +L ++ SD G+PPR+ + +++N Sbjct: 55 GHATRVVYKVPEEQPPNTLIGSLAADY-GFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLREC-QNQLPGDP--CILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDR-GTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKT-SLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NAQVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTS---HKL-LTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 813
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 256.529 bits (654), Expect = 5.351e-70 Identity = 237/794 (29.85%), Postives = 363/794 (45.72%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C + Q + + I EE P ++ IGNI H++ + ++ + +P +K+S G++ +S RID E +CA EE EC + ++ +D I I + V D NDN P F P +++ EN I + A D D T N V Y F LD P LIV++ LD E K Y ++ D T ++ +T L++ V D NDN P F + + ++ I EN PVG +I + A D D +I Y F + F + TG I +Q+ L + +K V A+D + A A + I V D+NDN P I N + ++E DP ++ + V+D D VN V C + ++ F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L + EN +G + +SA+D D + PN +F +D TG + + R DRE ER + D P Q VI+ VLDENDN P F F +SENL YS V G I TD D E N V + + + + +P SG I + DRE +YT +++A D G P S+ TI V D NDN P ++P S+ V ++A PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + + + P +G +L + SD G P H +F+++N Sbjct: 5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE-NKAVTLSI---LNDNDNFVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVN 775
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 256.529 bits (654), Expect = 2.048e-69 Identity = 237/794 (29.85%), Postives = 363/794 (45.72%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C + Q + + I EE P ++ IGNI H++ + ++ + +P +K+S G++ +S RID E +CA EE EC + ++ +D I I + V D NDN P F P +++ EN I + A D D T N V Y F LD P LIV++ LD E K Y ++ D T ++ +T L++ V D NDN P F + + ++ I EN PVG +I + A D D +I Y F + F + TG I +Q+ L + +K V A+D + A A + I V D+NDN P I N + ++E DP ++ + V+D D VN V C + ++ F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L + EN +G + +SA+D D + PN +F +D TG + + R DRE ER + D P Q VI+ VLDENDN P F F +SENL YS V G I TD D E N V + + + + +P SG I + DRE +YT +++A D G P S+ TI V D NDN P ++P S+ V ++A PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + + + P +G +L + SD G P H +F+++N Sbjct: 5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE-NKAVTLSI---LNDNDNFVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVN 775
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 256.529 bits (654), Expect = 2.081e-69 Identity = 237/794 (29.85%), Postives = 363/794 (45.72%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C + Q + + I EE P ++ IGNI H++ + ++ + +P +K+S G++ +S RID E +CA EE EC + ++ +D I I + V D NDN P F P +++ EN I + A D D T N V Y F LD P LIV++ LD E K Y ++ D T ++ +T L++ V D NDN P F + + ++ I EN PVG +I + A D D +I Y F + F + TG I +Q+ L + +K V A+D + A A + I V D+NDN P I N + ++E DP ++ + V+D D VN V C + ++ F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L + EN +G + +SA+D D + PN +F +D TG + + R DRE ER + D P Q VI+ VLDENDN P F F +SENL YS V G I TD D E N V + + + + +P SG I + DRE +YT +++A D G P S+ TI V D NDN P ++P S+ V ++A PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + + + P +G +L + SD G P H +F+++N Sbjct: 5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE-NKAVTLSI---LNDNDNFVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVN 775
BLAST of Protocadherin vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 165.622 bits (418), Expect = 7.371e-41 Identity = 168/590 (28.47%), Postives = 266/590 (45.08%), Query Frame = 1 Query: 640 VKKPLDYEVKSQYFATL---EACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVL-DENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQND----NDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 + K +D EV ++ + E D +T + +HVLD DN P F + Y EI E+ P+G +++V A D DS +I Y L + N +N I +G I+ L + + V A+DK ++ A + I V D+NDN+P S S N I N T P + T++ TD+D G N V + I +D E+ ++R I A I D P + L ++V DIN+ AP + + L EN G + +V A D D ++KYS G + F ID +G IK+ + LDRE R + + D + P T I VL D NDN PTF ISE + S++ + A D D+D+ K+ ++++ +R + I + + G IL+V + +H VEI A D G L ++++D N ND P S V I +SP GY +I L+A D D G+N+ + YS+ ++ F ++ +G++ V+ L F + + ASD+ PP + T + + ++ Sbjct: 224 LAKSMDREVLDKHILKVTAYERVDPTISASTTVV-VHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYS---LGEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDK-GTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAV-IATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEV----TLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED--FIIDEDSGLIKT-TKLLDRETTARYSLKVTARD-MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQII-TLKAVDNDEDQ---KITYRIEEA----DREVFS-ILDIGDQGAILSVSGELKRQDHKVRVEISATDQG--GLQGRCVVNVFIDDVNSAPYFND----HPFS-------VKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI--DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILD 775 HSP 2 Score: 160.999 bits (406), Expect = 1.809e-39 Identity = 184/670 (27.46%), Postives = 306/670 (45.67%), Query Frame = 1 Query: 355 ILKTTIMAKDKSSDQSESIN-IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEP-TGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQC--NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSL------SSIRSFDYENERE---IKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIE-NPKTGQCTVIIEVLDE-NDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN-NKLLFILNQVTGELRVARLLPIGQFQLFLRA 2310 +++ ++A DK + + ES + ++V D NDN P F V + EN I + +A D D + +VH + G +D S + + +++ +D + S A + A D + +T L I+V+D ND+ P+ + I + EN +G+++ V AID+DS I Y D FII E++G IK K L + +Y KV A D M I + +KD+NDN+P N + I+E P ++ TL+ D+D Q I +R++ E++S+ +I S E +R+ ++ EI D G + +NV + D+N AP F +K+ E+ G+ ++ + A D D + ++ + + +F IDP +G I S LDRE +R ++IVT + +P T I +LD+ NDN P F S ISE++ + +++A D D N V + L + S S +F++ SG + KLDRE + I A D G P LSA T+ + D NDN P + LS + + I NSP G + + A D D G+N+++++ + + LF + + + V R+L +F +A Sbjct: 340 LIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYS---TGEVTLRERIDAK-NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED------FIIDEDSGLIKTTKLLDRETTARYSLKVTARD-MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYN--VTISEEMPRGSQIITLKAVDND-----------EDQKIT-YRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQ--GRCVVNVFIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRIDPSSGDI-SVSSDLDRE--DRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFL-QVSAIDADIGP-NGIVDYFLNESSSSP----SIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTF-EQLS-----YDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKA 966 HSP 3 Score: 147.132 bits (370), Expect = 3.399e-35 Identity = 193/741 (26.05%), Postives = 319/741 (43.05%), Query Frame = 1 Query: 166 EESPIDMVIGNIVHLHPSFNKASYFIKSP--------FLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAK-DKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTI--DPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTY----SVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLR---ASDNGRP 2328 E++PI+ +I ++ H S Y + +P F + G++ L+ +D E + +H ILK T + D + S ++ +HV D DN P F K + E+ PIG + A D D+ + +Y E G NL S + PLD E S + A D T K+ +T +EI V+D NDN P F+ Y + ILEN + I V+A D+D K+ Y ++ ++ I +TG + L++++ AK + A D A V + I V D+ND++P + + +E N E+ + D+D G N + + + DF +D I + + D E ++ D G+P ++ V +KDIN+ AP F+K + + E +G I+ + A D D + Y + F+I G I S L R+ ++ + I TD + G+C V + +D+ ++ P F D I E+ S + A D D+ + N ++++ + SQ RI +P SG+I LDRE ++V + A D P L+ + ++D NDN P + + SS+ I+ + P G +++ A D D G N V Y S + + LF L++ +G LRV+ L QF + + A D G P Sbjct: 176 EDTPIETIIASVKASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVL-DKH---------ILKVTAYERVDPTISASTTVVVHVL--DVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEI-EYSLGEGNGK-NLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYS---MASSSGIGGLTIDYSTGEVTLRERIDAK-NSPITAVIRAKDGAQPALSSTVP-LTINVIDINDHAPTLIAAQKMITLEEN-VAIGEEVGRVYAIDEDSGPNGIIKYSM--EGSEDFIIDEDSGLI---KTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQD-HKVRVEISATD--QGGLQGRCVVNV-FIDDVNSAPYFNDHPFSVKIPEH-SPIGYPVITLKAEDHDRGD-NARIVYSID---SSQFFRI-DP-----SSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTS--SSYAA----TISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP 870 HSP 4 Score: 98.5969 bits (244), Expect = 2.322e-20 Identity = 114/423 (26.95%), Postives = 189/423 (44.68%), Query Frame = 1 Query: 358 LKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACD-TNKQCNTQA-LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLL---QQYINDFRLDAVGNEIYSLSSIRSFDYENER-----EIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKL-KLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI 1587 ++ I A D+ Q + ++V + D N P F +V + E+ PIG+ + +A D D R+ I + + F +D PS G I V LD E ++ + + A D + NT +E+ + D NDN P F+ Y I E+ PVG + V AID D + Y +E S + F + +G++++ KL + +FA D+ + A + I + + D+NDN+P LS + + I E P + T+ D D G NA++S ++ + D DA N + + + FDYE + E++A S + + + +HV D+N+ P KDF L +N + I + A D D +A L+Y E ND + +TG+I Sbjct: 651 VRVEISATDQGGLQGRCV-VNVFIDDVNSA-PYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI--DSSQFFRID----PSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSL-SAASEITLTLSDVNDNAPTFEQLSYD--LYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA-------SSGQLSSTVPVRIHVSDVNDNKPAL-KDFVILMNRFDNVQMARQIGFIPAFDPDQNATLEYFL--EENDLIEAEKYTGKI 1052
BLAST of Protocadherin vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 149.828 bits (377), Expect = 5.277e-36 Identity = 180/720 (25.00%), Postives = 307/720 (42.64%), Query Frame = 1 Query: 157 KIMEESPIDMVIGNI---------VHLHPSFNKASYFIKSPFLKLSDKGD--LMLSSRIDLETICAQHE----MCCEEVECILKTTIMAKDKSSDQ-----SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND----FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYS-FTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFI 2235 +I+ E P + IG+I +H S N+ ++ K D G + S +D E + E ++C + + I + ++ D S + + + D P+F K V + E+ PIG L A ++ ++ R+ +Y + +D S + ++K D+E + Y T+ A + N + +T + I + D NDN+P F EY + + E + ++ V A D DS F ++ Y H LS++ ++F I TG + QK L+ R ++ V A D + + ANI I V D + +P+ + SK EI T E + +G + V + Y D F +D +IY R D + + I+ N + + ++D N+ P+F ++ + E+ + V ASD+D + ++YS + P ID TGQ+ +G LD E ++ + TD P++ T+ I VLD NDN P F + EN S + G++ A DKD E N ++++++ T S+ I E + G + T + +DRE+ + + I A D G+P S+ + I V D NDN P ++ I + + A SP I + A DPD G N +V Y + L + Sbjct: 420 QIIIEHPQLLTIGDINDNAPQWHSSQIHISLNRTQGGSRTLTAKDPDLGQNGWIRYSVLDTELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRI-RYSLQNQDEHLTVDTM---SGTVCIQKTFDFEKQKSYQTTVIATNANSETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSY--HILSES---SSFSINPVTGEVFAQKPLA---RGRFHLVVSAKDGGGQSSENS-ANIHITVIDKDTKTPQFS----RSKYEIRTT----EDILPGIAIGSVGAMSKVKYSI---YSGDQDHNFSIDEDTGKIY---VTRYLDADVHDTVLLNIQATLPSGESN--QTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTG-SLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLEN-SPPKTIVGKVVARDKDSLE-NGQIVYRI--TNGSEYFGIDEKL------GNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLS-------ITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSLFVV 1092 HSP 2 Score: 102.834 bits (255), Expect = 1.086e-21 Identity = 182/787 (23.13%), Postives = 315/787 (40.03%), Query Frame = 1 Query: 88 KIDFCIIFLFYLCYQGSCQTVT-FKIMEESPIDMVIGNIVHLHPSFNKASYFIKSP------FLKLSDK-GDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEP--TGTFNLDQSRL---PSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALE--IHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAF-HKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNE-----------IYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHN-ILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFI 2364 K + I L +L + CQ +T F + E + I IG I YF+ P FLK+ ++ G++ + +D E ++ ++ +VE + E+I+I V V D+NDN P F + ++E +G L D D + VH+++ + F L ++ L+V LD E + +Y +EA D K L I ++D NDN P FS+ Y + N +G +I V+A D D ++I Y + S + N F I++ +G I L + V A+D + + AV I + L+ I L ++ + E TL + A VS + QQY D +L +G+ +Y L D E E + G + H L + + DIN+ AP++ + L NR QG + L D + ++YS + +ID TG+I +D + I+ + D + V+ ++LD PP F I E+ + ++ A + N+K +++++ +Q+ ++ T SG + K D E +Y + A T ++ +I ++D NDN P + P H + + P ++ + A+D D G V+Y +++ + F +N VTGE+ + L G+F L + A D G N ++ I + Sbjct: 6 KWNILIFSLIFLIFPTFCQCLTKFTVPESAQIGTRIGWISGKREESAAPKYFVVFPDEQTSKFLKVDERSGEISTIAHLDYEK-RSKFDIVAVKVE--------------ESGETIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFD-VHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSN-FAISQ-SGVITTTASLLPA--STHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENS------TLG------SIVARVS--IAQQY-RDTKLRLIGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQ-IIIEHPQL-LTIGDINDNAPQWHSSQIHISL--NRTQGGSRTLTAKDPDLGQNGWIRYSVLD--TELVSIDKETGRIFVP-NTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPED-TPIGTCLVKVVANNSQCG--NSK---RIRYSLQNQDEHLTVD----TMSGTVCIQKTFDFEKQKSYQTTVIA--TNANSETSTSLISIRLKDVNDNWPIFY-PNEYH-----LTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESS-SFSINPVTGEVFAQKPLARGRFHLVVSAKDGGGQSSENSANIHITV 731 HSP 3 Score: 91.2781 bits (225), Expect = 3.611e-18 Identity = 92/334 (27.54%), Postives = 155/334 (46.41%), Query Frame = 1 Query: 1417 PRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPND----YFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD--KDEINNKVLFQ--LQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLL---FILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVAT 2385 P F + K + E+ + G I +S R+ SA KY F P++ + +D +G+I S I LD E +R + +I+ E+ +T +++EV DENDN P+F D ISE + TD D K +++ V+ Q + + F +R+++E + +++ +LDRE Y + I A D G P +I + D NDN P + +T +++AN G +I +QATD D GENS ++Y + + F ++Q A LLP + + ASD+G P + + I + G +++ Sbjct: 20 PTFCQCLTKFTVPESAQIGTRIGWISGK-REESAAPKY-FVVFPDEQTSKFLKVDERSGEI-STIAHLDYE--KRSKFDIVAVKVEESGET--IDILVEVDDENDNAPSFADQVVKLEISE-FAQLGTSFALPTVTDGDGPKFDVHRFVILQGNVNNVFKLASRKVNEQL-----QADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVF------SRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASLLPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSS 334 HSP 4 Score: 88.1965 bits (217), Expect = 3.470e-17 Identity = 132/572 (23.08%), Postives = 244/572 (42.66%), Query Frame = 1 Query: 652 LDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEF-APRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTG-EPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEI----LTVKKLDREINHNYTVEIRAFDTGLPMLSA--HKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL-----PIGQFQLFLRASD-NGR 2325 LD E+ +Y + + +Q T+ +++ V + NDN PSF + + + EN VG + V A KD D + Y S F I + TG+I L L +V ++ + A D F N+ I V D+NDN+P + + + P + ++ D D ++ L Q + FR+ ++ ++ ER + + D+G P ++V + + P FEK + +++EN + G I +S + S Y E + F+ID +G +DRE E + + + + + QC + VLDENDN P F ++ ++ ++++ K+ G+I A+D+D E N +V +++ D ++ ++G I +LD N + + + A D G P +A ++ + + + P +V P ++ V++ ++ G ++ K++A++ N + YS+ + L I + TGEL + L PI ++L SD NGR Sbjct: 1888 LDREILERYSLKVIGTGSGQQIGTR-VDVRVNNLNDNVPSFPMSKPR-RVPENLRVGSYVATVGA--KDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATDGSFDTF----TNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLD--ARGALTYSLGQGSSSIFRVAPESGALF----MKVLPPAGERYL-VTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSGEE---SREFHYRIQDPEASKIFSIDKFGRLFVAG--PIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLKDSMAHGQKI-GQIMASDQDSGE-NGRVSYRILSGNDLNIVTLNP------DTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLP------VYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSLKEHQGKLGI-DVKTGELTLKTHLDWESEPI--ISMYLSVSDGNGR 2422 HSP 5 Score: 74.3294 bits (181), Expect = 5.014e-13 Identity = 112/445 (25.17%), Postives = 199/445 (44.72%), Query Frame = 1 Query: 451 PKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGT--FNLDQSRLPSIG-LIVKKPLDYEVKSQYFATLEACDTNKQCNTQALE----IHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQ----KYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVT-----------DDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINI--IVTDAIENP-KTGQCTVIIEV 1704 P F K + V EN IG + + +R Y ++P + F++D+ G L V P+D E ++ + +E N+ +Q ++ + VLD+NDN P F+ Y + + ++ GQ+I + A D+DS ++ Y LS N++ N + +TGSI+L + A++ + ++ V A D A AV + + + K++S SG++ + P E+ L+ T + +G+ + L+++ +D E L+ D+E+E I + D G+ R+ A L + V+ ++EFAP F K L++ + G ++ Q+ A D DG V+KYS + + I+ HTG I RL + +V R + I I A +P K + TV +E+ Sbjct: 2129 PGFEKAEFRFEVMENSKIGL------QIGNLSGEESREFHYRIQDPEASKIFSIDK-----FGRLFVAGPIDREQRATHEFQVEI--DNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRI--LSGNDL-NIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPA-RAAVGKVQVSL--------KMSSWSGSAPFFVL---PVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSLKEHQGKLGIDVKTGE---LTLKTHLDWESEPIISMYLSVSD-GNGRS-AVVPLKIVVEPVDEFAPVFTKSSYTLQIPISTPAGESVGQMQAIDEDGGVHGVVKYSIS-DRQSTVKIEEHTGII-----RLQKPLVSRRNLTIEQITVVAYSSPTKQSKTTVYLEI 2534 HSP 6 Score: 69.707 bits (169), Expect = 1.661e-11 Identity = 128/535 (23.93%), Postives = 219/535 (40.93%), Query Frame = 1 Query: 274 GDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKP--KQTVNVAENEPIGFYLYLDRALDADATSA-----NRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVL---DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFH-ELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAE----IECYDHGSPRNVAHKSLNVHVK--DINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG--SAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD 1821 G + L++ +D E + +H + TI A D S D N+ + VSD NDN P F KP + TV+ A P + ++ A D DA A + IF+ + L LP G +Y T+ A D + ++ + V+ + + P F + E++ E++EN +G QI +L + FH + D F I + G + + + + R ++F+V ++M M K + V D NDN P TS++ ++ + +++ + +D D G N VS ++L ND + + + S+ D + + A +E DHG P A + V +K + AP F ++ +LE+ G + ++ AS+R G + L YS E ID TG++ LD E I + + V+D +++E +DE P F S I + + V G++ A D+D Sbjct: 1982 GTIHLTAPLDFE-VLPEHTL-----------TIKATDGSFDTF--TNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIE-AHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPPAG------------ERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQI---------GNLSGEESREFHYRIQDPEASKIFSI-DKFGRLFVAGPIDREQRATHEFQVEIDNEM-MTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLK-DSMAHGQKIGQIMASDQDSGENGRVSYRILSG--NDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSLK-EHQGKLGIDVKTGELTLKT-HLDWESEPIISMYLSVSDGNGRSAVVPLKIVVEPVDE--FAPVFTKSSYTLQIPISTPAGESV-GQMQAIDED 2470 HSP 7 Score: 62.003 bits (149), Expect = 2.969e-9 Identity = 135/583 (23.16%), Postives = 232/583 (39.79%), Query Frame = 1 Query: 364 TTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQ-------TVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSF-SQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENEREI--KAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF----TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDND 2064 T + KD D S ++ IHV P F +P + V + EN I + R L T +R + F+ F+++ + G I PLD E ++ + D + ++ + + V DQNDN P + ++EI E+ VG + A D D K + F L D++ + + TG + L ++LS+ K K +V + K N+ I ++ + + + + PR F ++ + G+ ++ ++ I+ F +D+ G IR+ + E +REI + ++ GS + + + ++V V ++N+ P F + ++ EN G + V A D D A L+Y +G+ +F ID TG I LD E++ + I TD + T + I V D NDN PTF +S S + +I A D D + + L S IF+V ESG + K+ Y V + A D G+P S ++ + + D Sbjct: 1603 TIVAQKDDELDYS-TLKIHVE--------PVFTEPPKISSTSCGVVTIEENVGIEDF---KRILATGMTEESR---FRFQGNAPKFSINST----TGSISVLPLDREASQEHLLIIILTDGGSRNDSCTVRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGK--FSFELLEDSS--GSLDLVPETGDLVL-RRLSSLQSWKIKLRVVDHGVPGLYVEK---NLEISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAKLQPELAGLTYSI----VEGNIDSAFSVDSEG-------VIRT-NLELDREILERYSLKVIGTGSGQQIGTR-VDVRVNNLNDNVPSFPMS-KPRRVPENLRVGSYVATVGAKDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHL-TAPLDFEVLPEHTLTIKATDGSFDTFT---NLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDA---RGALTYSLGQG--------SSSIFRVAPESGALFM--KVLPPAGERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTD 2127
BLAST of Protocadherin vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 129.798 bits (325), Expect = 6.988e-30 Identity = 165/589 (28.01%), Postives = 263/589 (44.65%), Query Frame = 1 Query: 358 LKTTIMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKV-FAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKY----SFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGE------ILTVKKLDREINHN-YTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDP 2067 + I AKD + S ++ + ++V D ND+ P + ++ + + EN IG + A+D D + N + +Y E + F +D+ GLI K LD E ++Y + A D + I V+ D NDN P+F ++EY + I E P G QII ++A+D D D KI Y E +D + + I + + + +L RQ +K +V +A + V N+FI D+N ++P + KI E P + TL+ D D G NA + + FR+D +I S+SS D E+ + DH SP + V + DIN+ +P+F + E+ G + LQVSA D D + ++ Y S + F +D +G ++ +LDRE I + I D + + + + D NDN PTF +S I+EN S V G I A D D+ + N + F++ D++ +F + E E ILT + D E N + E++A +G LS+ I+V D NDN P Sbjct: 86 ITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDED-SGPNGIIKYSM-EGSEDFIIDEDS----GLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDED--QKITYRIEE-ADREVFSILDIGDQGAILSVSGELK---RQDHKVRVEISATDQGGLQGRCVVNVFI--DDVN-SAPYFNDHPFSVKIP--EHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF--FRIDPSSGDI-SVSS--DLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVS-SKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTV-GTIVARDADEGD-NADISFRIFGGADAK-------LFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA-SSG--QLSSTVPVRIHVSDVNDNKP 639 HSP 2 Score: 123.25 bits (308), Expect = 7.454e-28 Identity = 128/446 (28.70%), Postives = 201/446 (45.07%), Query Frame = 1 Query: 1063 IKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVL-DENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQND----NDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 I V D+NDN+P S S N I N T P + T++ TD+D G N V + I +D E+ ++R I A I D P + L ++V DIN+ AP + + L EN G + +V A D D ++KYS G + F ID +G IK+ + LDRE R + + D + P T I VL D NDN PTF ISE + S++ + A D D+D+ K+ ++++ +R + I + + G IL+V + +H VEI A D G L ++++D N ND P S V I +SP GY +I L+A D D G+N+ + YS+ ++ F ++ +G++ V+ L F + + ASD+ PP + T + + ++ Sbjct: 4 ITVVDVNDNAPVFASDSYNVTILENITIPAV-IATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEV----TLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED--FIIDEDSGLIKT-TKLLDRETTARYSLKVTARD-MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQII-TLKAVDNDEDQ---KITYRIEEA----DREVFS-ILDIGDQGAILSVSGELKRQDHKVRVEISATDQG--GLQGRCVVNVFIDDVNSAPYFND----HPFS-------VKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI--DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILD 416 HSP 3 Score: 120.939 bits (302), Expect = 3.396e-27 Identity = 142/542 (26.20%), Postives = 238/542 (43.91%), Query Frame = 1 Query: 730 LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTI--DPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTY----SVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLR---ASDNGRP 2328 +EI V+D NDN P F+ Y + ILEN + I V+A D+D K+ Y ++ ++ I +TG + L++++ AK + A D A V + I V D+ND++P + + +E N E+ + D+D G N + + + DF +D I + + D E ++ D G+P ++ V +KDIN+ AP F+K + + E +G I+ + A D D + Y + F+I G I S L R+ ++ + I TD + G+C V + +D+ ++ P F D I E+ S + A D D+ + N ++++ + SQ RI +P SG+I LDRE ++V + A D P L+ + ++D NDN P + + SS+ I+ + P G +++ A D D G N V Y S + + LF L++ +G LRV+ L QF + + A D G P Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHY---SMASSSGIGGLTIDYSTGEVTLRERIDAK-NSPITAVIRAKDGAQPALSSTVP-LTINVIDINDHAPTLIAAQKMITLEEN-VAIGEEVGRVYAIDEDSGPNGIIKYSM--EGSEDFIIDEDSGLI---KTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQD-HKVRVEISATD--QGGLQGRCVVNV-FIDDVNSAPYFNDHPFSVKIPEH-SPIGYPVITLKAEDHDRGD-NARIVYSID---SSQFFRI-DP-----SSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTS--SSYAA----TISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP 511 HSP 4 Score: 98.2117 bits (243), Expect = 2.802e-20 Identity = 114/423 (26.95%), Postives = 189/423 (44.68%), Query Frame = 1 Query: 358 LKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACD-TNKQCNTQA-LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLL---QQYINDFRLDAVGNEIYSLSSIRSFDYENER-----EIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKL-KLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI 1587 ++ I A D+ Q + ++V + D N P F +V + E+ PIG+ + +A D D R+ I + + F +D PS G I V LD E ++ + + A D + NT +E+ + D NDN P F+ Y I E+ PVG + V AID D + Y +E S + F + +G++++ KL + +FA D+ + A + I + + D+NDN+P LS + + I E P + T+ D D G NA++S ++ + D DA N + + + FDYE + E++A S + + + +HV D+N+ P KDF L +N + I + A D D +A L+Y E ND + +TG+I Sbjct: 292 VRVEISATDQGGLQGRCV-VNVFIDDVNSA-PYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI--DSSQFFRID----PSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSL-SAASEITLTLSDVNDNAPTFEQLSYD--LYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA-------SSGQLSSTVPVRIHVSDVNDNKPAL-KDFVILMNRFDNVQMARQIGFIPAFDPDQNATLEYFL--EENDLIEAEKYTGKI 693
BLAST of Protocadherin vs. Ensembl Celegans
Match: cdh-3 (Cadherin-3 [Source:UniProtKB/Swiss-Prot;Acc:P34616]) HSP 1 Score: 124.405 bits (311), Expect = 3.507e-28 Identity = 169/628 (26.91%), Postives = 270/628 (42.99%), Query Frame = 1 Query: 421 VSVSDKNDNWPKFVKPKQTVNVA---ENEPIGFYLYLDRAL--DADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYEN-EREIKAEIECYDHGSPRNVAHKSLNVHVKDINE-FAPRFEKDF----QKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIEN-PKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDY---------GENSNVTYSVMNNNKLLFI 2235 + V+D+ND P+F+ VN+ E + + + L + ++ D D V I T F ++ + + LI PLD E S + +EA D T + IHV D NDN P F Y I+I EN +G +II + A DKD D ++ Y S++ I F I TG I + K++ + ++++F V D + K + I V+D NDN P I NS I + DP R + + V IN LD + +SL++ EN E +K+ ++ P V HV + F P K F +KL + RE L V ++ D ++YS +D+ ++ TG +K+ LD E + II T +N P + I+++D NDN P F FN++EN S K+ G + A D D+ +++V +++ D+ + F VTESG+I +V+ LDRE Y + + A D G P + + V D++DN P + I V + + G +I+L A+D D G + + V N ++F+ Sbjct: 1636 IHVTDENDEAPRFIT-GDVVNLKVLEELDTVSYPLIIGSSIAEDLDEGQNGLVTYSILSGNTSLFAVNSTTGDILSLI---PLDREESSLHELLIEAKDAGIPSLSATSKILIHVGDINDNTPEFELSSYFIKISENSKIGSKIIRILATDKDKDA--ELQYSLE--SNDEITIPFRINVATGWITVAGKVNREENEEFRFFVKVTDGEKSS--KVIVE--IHVEDFNDNHPMIN--DRNSDIFV--PDPTRSVEIIHV-------------------INVHDLDKSDHLKFSLNNSNLNLSENGEITLKSPLQT---AVPVRVTVSDDAGHVAFMEYLFHPHSRKHFPVFVEKLDTVSVREHDEQELAVFKANGDS---IRYSIVSRCSDHLEMEKSTGILKTK-SSLDAEEYSECLVFIIATTYFDNKPLSTITKATIKIVDINDNSPRFDQQLYRFNVTEN--SGPKLIGHVIARDIDR---SSRVFYEIVGG-DANHE------FMVTESGQIESVRDLDRETKSEYHLIVEAIDDGKPRRRGNTTVIVTVLDEDDNAPRF-------SRIFHVEVPEDVRIGEPVIQLSASDADEHSNHRFELDGGGEGIPFRVDENTGMVFV 2202 HSP 2 Score: 78.9518 bits (193), Expect = 2.150e-14 Identity = 83/279 (29.75%), Postives = 127/279 (45.52%), Query Frame = 1 Query: 925 FIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPK-ITSLSGNSKI--EINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDY----FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFID 1740 F I+ G+I L + + Y+F + A K+ + + I V D ND +P+ IT N K+ E++ P + + D D G N V+ +L + F +++ +I SL + D E + IE D G P A + +HV DIN+ P FE +K+ EN + G I+++ A+D+D A L+YS E ND F I+ TG I +++RE E + VTD K+ + V I V D NDN P D Sbjct: 1598 FTISPFDGTIFTNSPLDFENIKTYRFNITAG--------KSTSQVIIHVTDENDEAPRFITGDVVNLKVLEELDTVSYPLIIGSSIAEDLDEGQNGLVTYSILSGNTSLFAVNSTTGDILSLIPL---DREESSLHELLIEAKDAGIPSLSATSKILIHVGDINDNTPEFELSSYFIKISENSKIGSKIIRILATDKDKDAELQYSL--ESNDEITIPFRINVATGWITVA-GKVNREENEEFRFFVKVTDG---EKSSKVIVEIHVEDFNDNHPMIND 1859 HSP 3 Score: 70.8626 bits (172), Expect = 6.007e-12 Identity = 96/386 (24.87%), Postives = 170/386 (44.04%), Query Frame = 1 Query: 445 NWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEAC---DTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE-LFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG--SAVLKYSFTGEPNDYFTIDPHTG 1581 ++P FV+ TV+V E++ ++ L + + + I + +++S G++ K LD E S+ + A D I ++D NDN P F QQ Y+ + EN G ++I I +D D +++ F+E+ + + F++TE +G I+ + L + + +Y V A D + + + V D +DN+P+ + + +E+ E E + L +D D N + I FR+D ++ S+ D+E ++ + +++ D + SL V+VKD+N+ AP FEK L + E I Q ASD D + ++YS T YF I+P TG Sbjct: 1944 HFPVFVEKLDTVSVREHD--------EQELAVFKANGDSIRYSIVSRCSDHLEMEKS----TGILKTKSSLDAEEYSECLVFIIATTYFDNKPLSTITKATIKIVDINDNSPRFDQQLYRFNVTEN--SGPKLIG-HVIARDIDRSSRV---FYEIVGGDANHEFMVTE-SGQIESVRDLDRETKSEYHLIVEAIDD-GKPRRRGNTTVIVTVLDEDDNAPRFSRIF---HVEVPEDVRIGEPVIQLSASDADEHSNHRFELDGGGEGI-PFRVDENTGMVFVNDSL---DFEKKQSYRIKVKLTDGAW---LIETSLFVNVKDVNDNAPIFEK---PEYLFISEENSAEIGQFHASDMDSENNGKIRYSVTSP---YFKIEPSTG 2293 HSP 4 Score: 65.855 bits (159), Expect = 2.197e-10 Identity = 64/206 (31.07%), Postives = 98/206 (47.57%), Query Frame = 1 Query: 1606 LDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTF-IDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVK---KLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVM 2211 LDRE I++ II + ++I+VLD NDN P F ID+ V I E +V+ ATD D+ + ++L DS + F + +S L ++ KLDRE Y++ + A D G+P LS+ + I + D NDN P++ GI ++ + N P + L ATD D ENS +TY ++ Sbjct: 81 LDRESENAIDMLIITSPP------SIIHILIDVLDVNDNSPIFPIDVQRV-EIPETAPIGWRVQIS-GATDPDEGKNGTIGKYEL---VDSLATVDTMSPFGIVQSDGFLFLEVTGKLDRETRDLYSMRLTAIDQGVPELSSSCHLNILILDINDNPPNF--------GIRSLTLNWNGLPNTKLFSLNATDLDSNENSLLTYRIL 267 HSP 5 Score: 61.6178 bits (148), Expect = 4.883e-9 Identity = 113/475 (23.79%), Postives = 184/475 (38.74%), Query Frame = 1 Query: 1021 KMAMAFHKAVANIFIKVKDLNDNSPKITSLSG--------NSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGE-PNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVF--NISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES---GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNI-----TANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQ-----FQLFLRASDNGRPPRHNETSLFIFINGD 2373 KM + N+ I + D+NDN PKI + G N K+E + D + + D D+ N L+ + + SL+SI NE A I YD+ P V + + + + +D + N + G I S ++ + + +D F IDP TG I+S + +++I I D + G C V I + D+ + +G F NISE +++V G+I L + RI + + T S G I T LD E Y I A + ++ I+V D+ND P ++T G + + + T + P +I A D D G+N VTYS+++ N LF +N TG+ + L+P+ + +L + A D G P + + I + GD Sbjct: 1342 KMIEPSENRIWNLLIFIADVNDNKPKILNAPGRIIVYDDLNYKLEWEDLDAIASDVSFSIVDGDVFGN----------------LEIEDSGVISLNSI-----PNE-SFNATIRIYDNRPPFKVHFDDVTIEFQVTQKLRAVTCEDAEFWMFFGNEDVGMLI---------ASEIVTWRIVPQIGSDSFKIDPITGIIQSTPNTKPTSDIAKLKIQAISYDG---ERVGFCDVKIHI-DKAAFVENVVLSNGTFEFNISETADRFTEV-GKIVI---------------LGAGLEGSVFRIQDNDYNFTISPFDGTIFTNSPLDFENIKTYRFNITAGKSTSQVI-------IHVTDENDEAPRFIT-----GDVVNLKVLEELDTVSYP--LIIGSSIAEDLDEGQNGLVTYSILSGNTSLFAVNSTTGD--ILSLIPLDREESSLHELLIEAKDAGIPSLSATSKILIHV-GD 1748 HSP 6 Score: 59.3066 bits (142), Expect = 2.263e-8 Identity = 49/184 (26.63%), Postives = 90/184 (48.91%), Query Frame = 1 Query: 1057 IFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELF-TLQVTDDDIGVNANVSCQLLQQ---YINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD-GSAVLKYSFTGEPNDYFTIDPHTGQIKS 1593 I + VK LN +SP + ++I + E P +F +Q D+D G++ VS ++L + Y F LD+ SL S+++FD E +R E E D G+P + + ++D+N+ P+F + + + I+Q + +D D + L+Y +D+F +D TG++ + Sbjct: 619 ITLIVKPLNQHSP----ICQITEIHVLENAPIGTIFGRIQARDEDSGLSGVVSYKILTKSDDYDGIFHLDSTSG---SLRSLKAFDAEKKRSYTFEYEAKDLGTPSKTTNCPATIFIEDVNDNVPKFGSRYYTATISGKSNETVAIVQANDNDVDVKNQKLQYHLLNY-HDFFQLDKETGKVTT 794 HSP 7 Score: 55.4546 bits (132), Expect = 3.382e-7 Identity = 172/810 (21.23%), Postives = 301/810 (37.16%), Query Frame = 1 Query: 112 LFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKS-PFLKLSDKG-DLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGT------FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYG---------FHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-----------RELFTLQVTDDDIGVNANVSCQLL---QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRN-VAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKY--------SFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDE--------NDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHG---GIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN---KLLFILNQVTGELRVARLLPIGQ---FQLFLRASDNGRPPRHNETSLFIFI 2364 LF +Q S +T+ F + E++ ++ +IG HL + +K ++ +L +SS +D E+ A + I I+I + V D NDN P F Q V + E PIG+ + + A D D + +Y + T F + QS + L V LD E + Y L A D + ++ L I +LD NDN P+F + + P ++ ++ A D DS+ + + Y +SD NI ++T+N + + Q+ +F V A D + NI + ++ N++ P I I +D P + L L +TD D + AN + + +Q I F L + + ++ +++ + N+ + E D SP + + K L + F K + K + + H + V GS V SF +D F IDP G I + + E V + I + + + + V ++V+ E + P + + F +++ S V GR+ Q+ T D+ +SE V G + K + + LP+ ++N T Q V PL+ H I +++ N+P G + ++QA D D G + V+Y ++ + +F L+ +G LR + + + A D G P + IFI Sbjct: 20 LFNFTHQFSEETIKFSVSEDAKLNTIIG---HLEAEIGYTYRLSRGNSKIKFDEQTLELSVSSPLDRESENAIDMLIITSPPSI-----------------IHILIDVLDVNDNSPIFPIDVQRVEIPETAPIGWRVQISGATDPDEGKNGTIGKYELVDSLATVDTMSPFGIVQSD-GFLFLEVTGKLDRETRDLYSMRLTAIDQGVPELSSSCHLNILILDINDNPPNFGIRSLTLN-WNGLP-NTKLFSLNATDLDSNENSLLTYRILPSGPTSEMFSISDENI----LVTQN----------NTECLQRCEFVVEARDSGVPPLSTTL-NIVVNMEYGNEHEPNI-------NIRFYPSDYPFIIVQPEDVNGKTLAILSITDSDGPLGANSTIWIENGNEQSI--FSL--ISRQSINILTVKHVENANQEQYILEFRANDGQSPADRITRKELKI-----------FFKKYVKSTQIHVERESH--VTVEKDTVPGSFVAHVETNCTDMCSFELANSDVFKIDPFNGIIVTS--SILPEGVTSYHLPIRIHLPPPSTQLVEADVFVKVIQESVPKNLIRSSESPIHLKRAYTFTTWQDV-SLGTVIGRLPKA-------------QIYSTIDT----VSE--LGVFPDGSVFVGKTITSDF------------VTLPVTLVNRNTT-----QTSIITLIVKPLNQHSPICQITEIHVLENAPIGTIFGRIQARDEDSGLSGVVSYKILTKSDDYDGIFHLDSTSGSLRSLKAFDAEKKRSYTFEYEAKDLGTPSKTTNCPATIFI 728
BLAST of Protocadherin vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 122.865 bits (307), Expect = 8.423e-28 Identity = 178/707 (25.18%), Postives = 303/707 (42.86%), Query Frame = 1 Query: 367 TIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAE----NEPI----GFYLYLDRALDADATSA-NRVHQYIFKEPTGT----FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQA---------LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEA--IDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAE---IECYDHGSPRNVAHKSLNVHVKDINEFAPRF-EKDFQKLKLLENREQGHN----ILQVSASDRDG----SAVLKYSFT------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIE--INIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH-------TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDN 2319 T+ A D +S + + V V D ND P+F T + E NE + G + +A+D D+ N VH I E G F +D+ + + + D E Y T+EA D + A ++I + D NDN PSF +Q+Y + E+ G +I ++A +DK S+L +H + R F + ++G+I +++ L + +Y + A+D H A N++I ++D+NDN+P+ + + + D P+ LF + TD D ++ L+ D FR +G ++ +++ D + + + ++ D V + + V+V+DIN+ +P F E+ F ++ ENRE H+ + V A D D +A ++Y GE F ID +TG+I + +R LDRE+ E I + D + G V I+V D NDN P F ++ E + V +A D D++ +N +QL T D +++ S + +V + + V + D + + IR D A + + D+ND+ P HG + + P G I + ATD D G+ + + ++ K F ++Q G LRVA L I + L + A DN Sbjct: 1181 TLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDEL---TGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLR------YHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASD----GRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFR---IGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIE--ENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGE--SVFRIDQNTGKIFA-MRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMS-FSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRD-----GFHLGIRVSDG---RHDAEAAVHVALVDRNDHAP------HIHGATEH-RVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQ-DGTLRVAHTLDREDIAVYNLIIEAYDN 1849 HSP 2 Score: 96.6709 bits (239), Expect = 8.934e-20 Identity = 152/638 (23.82%), Postives = 258/638 (40.44%), Query Frame = 1 Query: 451 PKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRL----PSIGLI-VKKPLDYE---VKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQK----------YKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLS------------GNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDY-ENEREIKAEIECYDHG------SPRNVAHKSLNVHVKDINEFAPRFE-----KDFQKLKLLENREQGHNILQVSASDRDGSA----VLKYSFT-GEPNDYFTIDPHTGQIKSGIRRL-DREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ-HTFDSQNRRISEPIFKVT--ESGEILTVKKLDREINHNYTVEIRAFDTGLP-MLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208 P+F K + V V+E+ + + + +A + R I G D+++ PS G+I + + LD++ + + + A + N++ + L I + D NDN P+F++ Y ++ E+ P+ Q I+ V A+DKD + +N R T+ + + SI ++SAKVR Y+F V A D + A I I+ ++ ND S S G I+I D R+ T D N + Q +N F +D + + + D E E I + D G S + ++ +L + ++D+N P F D K+ + I++V A+D D SA V +T E F ID TG + + DRE R ++ + TD + P G C +EV+D NDN P F S ++S + + V + A D D N ++ + L+ T + + F++ SGEI +K + + + + A D G+P L + T+ V D+ P W T GI + N +I++ +A NS+V Y + Sbjct: 528 PQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRSFEDGRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNRESHVD-LTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKD--------------TGDNSRITYSVDNHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDK----NGRST-----QKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVI-TVFAFDNDAAH-NAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMK-TQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGI---TVDENVELNKVILRCRAVSSGDSRNSDVIYKL 1135 HSP 3 Score: 68.1662 bits (165), Expect = 4.443e-11 Identity = 86/363 (23.69%), Postives = 151/363 (41.60%), Query Frame = 1 Query: 1288 IRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLE-NREQGHNILQVSASDRDG---SAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISE-NLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKL----DREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQ-------FQLFLRASDNGRP 2328 ++ +YE I A + S R +++ +HV DI+E L ++ N G + Q A D G S VL + P F +DP +G +++G + +R RI + +N + V I + ++ PP F +SE NL YS V + + +D + + ++ + F++ S I+ + +L D + + +++ A + +H + TI ++D NDN P + PL +T + + P I+K+ A D D G+NS +TYSV N+N F +N GE+ L Q ++ + A D+G P Sbjct: 381 LKPLNYEKTSSIIATVPINGLQSTRT---QTIRIHVADIDEPPSFVNSPLPMLAVVPLNPTIGRIVYQFVARDEHGDGDSNVLYKTIDVIPAGSFIVDPKSGVVRTGWSKYERGDTYRISAQAMDLSPSDNTTSQLSEVAILEILADERPPQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRSFED---GRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNR---ESHVDLTIRIDDVNDNVPTFTRPL------YTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHN---FSINS-NGEISAKVRLDADQLNERHFVYRFNVTARDHGEP 724
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0303223) HSP 1 Score: 191.43 bits (485), Expect = 1.292e-48 Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 Query: 370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364 + A D +S QSE + ++ V V D NDN+P+F + TV V E++ G + RA DAD + + I T + F++D S + L+ KPLDYE Y + A D + + NT L ++V+D NDN P F ++Q +LEN PVG II V+A D D +I Y E DN + TG ++ K L + + ++ F+V A D + A +++ I V+D+NDN P + + E PP T VT D ++ + ++ N ++ +S DY+ E+ + D G + A ++++++ D N FAP FE + E+ G +L VSA+D D A + YS G P D F+I+P TG I + LDRE + + D NP T V I V D NDN P F +I E+ + V ++AA+D D +N ++ + L +R I + F + SG I T K LDRE + + A D G P LS+ I +ED ND+ P + + T+ + NSP G ++ ++ A DPD G N+ V YS++ + F L G R A+LL + + F+L +RA+ PP N+ + I + Sbjct: 548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210 HSP 2 Score: 168.703 bits (426), Expect = 1.114e-41 Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 Query: 160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331 ++EE P + + P + Y + S L + + SR + T A + E+ + ++A D S +S + + V+V D ND+ P F + ++ E +G + RA D D N +Y + T L Q + I G+I + LD E Y + A D + ++ T ++++ VLD NDNYP FS++ Y +++ E+ G + + + A D D I Y + N ++ F I +G + L K L + + Y+ + A D + + + + V D NDN+P+ + + + + +Q D D G NA ++ + ++ N F L AV + +I+ D E + ++ D G P A S+ + V+D+N+ P F + + + E++ G + V+A+D D + L Y TG F I G+ + + + LD + +R + + TD+ ++ TV I + D N+ P F + ++ E+ + V ++ATD D +N ++ + L +S N S F + ++G I+T LDRE Y + + A D G P LS + I V D NDN P + +PL + +I ++ G +I++ A+DPD G N + Y + + + F+++ +G +R + L + F L A D G PP Sbjct: 368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092 HSP 3 Score: 166.007 bits (419), Expect = 7.817e-41 Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 Query: 451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208 P F + +V E +P G + RA D D+ + + F +D G++ LD E+ ++ + A D + + T L+++VLD ND+ P+F ++++ I E VG +I + A D+D +I YG ++D + F I +G I + L + Y V AAD + + A A++ +KV D NDN P+ + + ++ ++ + + ++ TD D G NA + ++ + F +D++ ++ S ++ DYE+ R + I D GSP L V+V D N+ APRF + +LEN G+NI++V A D D +A + YS + +++ +DP TG +++ I+ LDRE R ++ D PK+ +V+I V D NDN P F N+ E+ + V + ATD D+D +L + + N R I G I + LD + + + + A D+G S I + D N+ P + ++ ++ ++P G ++ + ATD D G N+ +TYS+ Sbjct: 357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936 HSP 4 Score: 132.494 bits (332), Expect = 1.357e-30 Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 Query: 370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848 ++AKD +S S ++ ++V D NDN P F NV E++P G + A D D S R+H I T G F + GLI + + LDY+ + ++ T+ A D+ + +T + I++ D N+ P F Y + E+ PVG ++ V A D D + +I Y +E S N + + F I TG+I L + Y V A D + ++ I V D+NDN+P S L G S I++ +DP D+G+N + L + I D F +D I + + D E+ D GSP + + + ++D+N+ P F D L + EN G + ++ A D D AV+ YS G + ++ F++ G ++ + LD E +R E+ V A P + I V D NDN P D +FN + ++ GRI A D D D+++ ++L Sbjct: 764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0088214) HSP 1 Score: 191.43 bits (485), Expect = 1.292e-48 Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 Query: 370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364 + A D +S QSE + ++ V V D NDN+P+F + TV V E++ G + RA DAD + + I T + F++D S + L+ KPLDYE Y + A D + + NT L ++V+D NDN P F ++Q +LEN PVG II V+A D D +I Y E DN + TG ++ K L + + ++ F+V A D + A +++ I V+D+NDN P + + E PP T VT D ++ + ++ N ++ +S DY+ E+ + D G + A ++++++ D N FAP FE + E+ G +L VSA+D D A + YS G P D F+I+P TG I + LDRE + + D NP T V I V D NDN P F +I E+ + V ++AA+D D +N ++ + L +R I + F + SG I T K LDRE + + A D G P LS+ I +ED ND+ P + + T+ + NSP G ++ ++ A DPD G N+ V YS++ + F L G R A+LL + + F+L +RA+ PP N+ + I + Sbjct: 548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210 HSP 2 Score: 168.703 bits (426), Expect = 1.114e-41 Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 Query: 160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331 ++EE P + + P + Y + S L + + SR + T A + E+ + ++A D S +S + + V+V D ND+ P F + ++ E +G + RA D D N +Y + T L Q + I G+I + LD E Y + A D + ++ T ++++ VLD NDNYP FS++ Y +++ E+ G + + + A D D I Y + N ++ F I +G + L K L + + Y+ + A D + + + + V D NDN+P+ + + + + +Q D D G NA ++ + ++ N F L AV + +I+ D E + ++ D G P A S+ + V+D+N+ P F + + + E++ G + V+A+D D + L Y TG F I G+ + + + LD + +R + + TD+ ++ TV I + D N+ P F + ++ E+ + V ++ATD D +N ++ + L +S N S F + ++G I+T LDRE Y + + A D G P LS + I V D NDN P + +PL + +I ++ G +I++ A+DPD G N + Y + + + F+++ +G +R + L + F L A D G PP Sbjct: 368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092 HSP 3 Score: 166.007 bits (419), Expect = 7.817e-41 Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 Query: 451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208 P F + +V E +P G + RA D D+ + + F +D G++ LD E+ ++ + A D + + T L+++VLD ND+ P+F ++++ I E VG +I + A D+D +I YG ++D + F I +G I + L + Y V AAD + + A A++ +KV D NDN P+ + + ++ ++ + + ++ TD D G NA + ++ + F +D++ ++ S ++ DYE+ R + I D GSP L V+V D N+ APRF + +LEN G+NI++V A D D +A + YS + +++ +DP TG +++ I+ LDRE R ++ D PK+ +V+I V D NDN P F N+ E+ + V + ATD D+D +L + + N R I G I + LD + + + + A D+G S I + D N+ P + ++ ++ ++P G ++ + ATD D G N+ +TYS+ Sbjct: 357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936 HSP 4 Score: 132.494 bits (332), Expect = 1.357e-30 Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 Query: 370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848 ++AKD +S S ++ ++V D NDN P F NV E++P G + A D D S R+H I T G F + GLI + + LDY+ + ++ T+ A D+ + +T + I++ D N+ P F Y + E+ PVG ++ V A D D + +I Y +E S N + + F I TG+I L + Y V A D + ++ I V D+NDN+P S L G S I++ +DP D+G+N + L + I D F +D I + + D E+ D GSP + + + ++D+N+ P F D L + EN G + ++ A D D AV+ YS G + ++ F++ G ++ + LD E +R E+ V A P + I V D NDN P D +FN + ++ GRI A D D D+++ ++L Sbjct: 764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304899) HSP 1 Score: 191.045 bits (484), Expect = 1.372e-48 Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 Query: 370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364 + A D +S QSE + ++ V V D NDN+P+F + TV V E++ G + RA DAD + + I T + F++D S + L+ KPLDYE Y + A D + + NT L ++V+D NDN P F ++Q +LEN PVG II V+A D D +I Y E DN + TG ++ K L + + ++ F+V A D + A +++ I V+D+NDN P + + E PP T VT D ++ + ++ N ++ +S DY+ E+ + D G + A ++++++ D N FAP FE + E+ G +L VSA+D D A + YS G P D F+I+P TG I + LDRE + + D NP T V I V D NDN P F +I E+ + V ++AA+D D +N ++ + L +R I + F + SG I T K LDRE + + A D G P LS+ I +ED ND+ P + + T+ + NSP G ++ ++ A DPD G N+ V YS++ + F L G R A+LL + + F+L +RA+ PP N+ + I + Sbjct: 548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210 HSP 2 Score: 168.318 bits (425), Expect = 1.343e-41 Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 Query: 160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331 ++EE P + + P + Y + S L + + SR + T A + E+ + ++A D S +S + + V+V D ND+ P F + ++ E +G + RA D D N +Y + T L Q + I G+I + LD E Y + A D + ++ T ++++ VLD NDNYP FS++ Y +++ E+ G + + + A D D I Y + N ++ F I +G + L K L + + Y+ + A D + + + + V D NDN+P+ + + + + +Q D D G NA ++ + ++ N F L AV + +I+ D E + ++ D G P A S+ + V+D+N+ P F + + + E++ G + V+A+D D + L Y TG F I G+ + + + LD + +R + + TD+ ++ TV I + D N+ P F + ++ E+ + V ++ATD D +N ++ + L +S N S F + ++G I+T LDRE Y + + A D G P LS + I V D NDN P + +PL + +I ++ G +I++ A+DPD G N + Y + + + F+++ +G +R + L + F L A D G PP Sbjct: 368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092 HSP 3 Score: 165.622 bits (418), Expect = 9.107e-41 Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 Query: 451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208 P F + +V E +P G + RA D D+ + + F +D G++ LD E+ ++ + A D + + T L+++VLD ND+ P+F ++++ I E VG +I + A D+D +I YG ++D + F I +G I + L + Y V AAD + + A A++ +KV D NDN P+ + + ++ ++ + + ++ TD D G NA + ++ + F +D++ ++ S ++ DYE+ R + I D GSP L V+V D N+ APRF + +LEN G+NI++V A D D +A + YS + +++ +DP TG +++ I+ LDRE R ++ D PK+ +V+I V D NDN P F N+ E+ + V + ATD D+D +L + + N R I G I + LD + + + + A D+G S I + D N+ P + ++ ++ ++P G ++ + ATD D G N+ +TYS+ Sbjct: 357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936 HSP 4 Score: 132.494 bits (332), Expect = 1.476e-30 Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 Query: 370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848 ++AKD +S S ++ ++V D NDN P F NV E++P G + A D D S R+H I T G F + GLI + + LDY+ + ++ T+ A D+ + +T + I++ D N+ P F Y + E+ PVG ++ V A D D + +I Y +E S N + + F I TG+I L + Y V A D + ++ I V D+NDN+P S L G S I++ +DP D+G+N + L + I D F +D I + + D E+ D GSP + + + ++D+N+ P F D L + EN G + ++ A D D AV+ YS G + ++ F++ G ++ + LD E +R E+ V A P + I V D NDN P D +FN + ++ GRI A D D D+++ ++L Sbjct: 764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0300578) HSP 1 Score: 191.045 bits (484), Expect = 1.372e-48 Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 Query: 370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364 + A D +S QSE + ++ V V D NDN+P+F + TV V E++ G + RA DAD + + I T + F++D S + L+ KPLDYE Y + A D + + NT L ++V+D NDN P F ++Q +LEN PVG II V+A D D +I Y E DN + TG ++ K L + + ++ F+V A D + A +++ I V+D+NDN P + + E PP T VT D ++ + ++ N ++ +S DY+ E+ + D G + A ++++++ D N FAP FE + E+ G +L VSA+D D A + YS G P D F+I+P TG I + LDRE + + D NP T V I V D NDN P F +I E+ + V ++AA+D D +N ++ + L +R I + F + SG I T K LDRE + + A D G P LS+ I +ED ND+ P + + T+ + NSP G ++ ++ A DPD G N+ V YS++ + F L G R A+LL + + F+L +RA+ PP N+ + I + Sbjct: 548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210 HSP 2 Score: 168.318 bits (425), Expect = 1.343e-41 Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 Query: 160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331 ++EE P + + P + Y + S L + + SR + T A + E+ + ++A D S +S + + V+V D ND+ P F + ++ E +G + RA D D N +Y + T L Q + I G+I + LD E Y + A D + ++ T ++++ VLD NDNYP FS++ Y +++ E+ G + + + A D D I Y + N ++ F I +G + L K L + + Y+ + A D + + + + V D NDN+P+ + + + + +Q D D G NA ++ + ++ N F L AV + +I+ D E + ++ D G P A S+ + V+D+N+ P F + + + E++ G + V+A+D D + L Y TG F I G+ + + + LD + +R + + TD+ ++ TV I + D N+ P F + ++ E+ + V ++ATD D +N ++ + L +S N S F + ++G I+T LDRE Y + + A D G P LS + I V D NDN P + +PL + +I ++ G +I++ A+DPD G N + Y + + + F+++ +G +R + L + F L A D G PP Sbjct: 368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092 HSP 3 Score: 165.622 bits (418), Expect = 9.107e-41 Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 Query: 451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208 P F + +V E +P G + RA D D+ + + F +D G++ LD E+ ++ + A D + + T L+++VLD ND+ P+F ++++ I E VG +I + A D+D +I YG ++D + F I +G I + L + Y V AAD + + A A++ +KV D NDN P+ + + ++ ++ + + ++ TD D G NA + ++ + F +D++ ++ S ++ DYE+ R + I D GSP L V+V D N+ APRF + +LEN G+NI++V A D D +A + YS + +++ +DP TG +++ I+ LDRE R ++ D PK+ +V+I V D NDN P F N+ E+ + V + ATD D+D +L + + N R I G I + LD + + + + A D+G S I + D N+ P + ++ ++ ++P G ++ + ATD D G N+ +TYS+ Sbjct: 357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936 HSP 4 Score: 132.494 bits (332), Expect = 1.476e-30 Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 Query: 370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848 ++AKD +S S ++ ++V D NDN P F NV E++P G + A D D S R+H I T G F + GLI + + LDY+ + ++ T+ A D+ + +T + I++ D N+ P F Y + E+ PVG ++ V A D D + +I Y +E S N + + F I TG+I L + Y V A D + ++ I V D+NDN+P S L G S I++ +DP D+G+N + L + I D F +D I + + D E+ D GSP + + + ++D+N+ P F D L + EN G + ++ A D D AV+ YS G + ++ F++ G ++ + LD E +R E+ V A P + I V D NDN P D +FN + ++ GRI A D D D+++ ++L Sbjct: 764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304900) HSP 1 Score: 191.045 bits (484), Expect = 1.482e-48 Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 Query: 370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364 + A D +S QSE + ++ V V D NDN+P+F + TV V E++ G + RA DAD + + I T + F++D S + L+ KPLDYE Y + A D + + NT L ++V+D NDN P F ++Q +LEN PVG II V+A D D +I Y E DN + TG ++ K L + + ++ F+V A D + A +++ I V+D+NDN P + + E PP T VT D ++ + ++ N ++ +S DY+ E+ + D G + A ++++++ D N FAP FE + E+ G +L VSA+D D A + YS G P D F+I+P TG I + LDRE + + D NP T V I V D NDN P F +I E+ + V ++AA+D D +N ++ + L +R I + F + SG I T K LDRE + + A D G P LS+ I +ED ND+ P + + T+ + NSP G ++ ++ A DPD G N+ V YS++ + F L G R A+LL + + F+L +RA+ PP N+ + I + Sbjct: 548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKI------TLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210 HSP 2 Score: 168.318 bits (425), Expect = 1.332e-41 Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 Query: 160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331 ++EE P + + P + Y + S L + + SR + T A + E+ + ++A D S +S + + V+V D ND+ P F + ++ E +G + RA D D N +Y + T L Q + I G+I + LD E Y + A D + ++ T ++++ VLD NDNYP FS++ Y +++ E+ G + + + A D D I Y + N ++ F I +G + L K L + + Y+ + A D + + + + V D NDN+P+ + + + + +Q D D G NA ++ + ++ N F L AV + +I+ D E + ++ D G P A S+ + V+D+N+ P F + + + E++ G + V+A+D D + L Y TG F I G+ + + + LD + +R + + TD+ ++ TV I + D N+ P F + ++ E+ + V ++ATD D +N ++ + L +S N S F + ++G I+T LDRE Y + + A D G P LS + I V D NDN P + +PL + +I ++ G +I++ A+DPD G N + Y + + + F+++ +G +R + L + F L A D G PP Sbjct: 368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092 HSP 3 Score: 165.622 bits (418), Expect = 9.187e-41 Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 Query: 451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208 P F + +V E +P G + RA D D+ + + F +D G++ LD E+ ++ + A D + + T L+++VLD ND+ P+F ++++ I E VG +I + A D+D +I YG ++D + F I +G I + L + Y V AAD + + A A++ +KV D NDN P+ + + ++ ++ + + ++ TD D G NA + ++ + F +D++ ++ S ++ DYE+ R + I D GSP L V+V D N+ APRF + +LEN G+NI++V A D D +A + YS + +++ +DP TG +++ I+ LDRE R ++ D PK+ +V+I V D NDN P F N+ E+ + V + ATD D+D +L + + N R I G I + LD + + + + A D+G S I + D N+ P + ++ ++ ++P G ++ + ATD D G N+ +TYS+ Sbjct: 357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936 HSP 4 Score: 132.494 bits (332), Expect = 1.514e-30 Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 Query: 370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848 ++AKD +S S ++ ++V D NDN P F NV E++P G + A D D S R+H I T G F + GLI + + LDY+ + ++ T+ A D+ + +T + I++ D N+ P F Y + E+ PVG ++ V A D D + +I Y +E S N + + F I TG+I L + Y V A D + ++ I V D+NDN+P S L G S I++ +DP D+G+N + L + I D F +D I + + D E+ D GSP + + + ++D+N+ P F D L + EN G + ++ A D D AV+ YS G + ++ F++ G ++ + LD E +R E+ V A P + I V D NDN P D +FN + ++ GRI A D D D+++ ++L Sbjct: 764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 257.299 bits (656), Expect = 1.620e-70 Identity = 235/798 (29.45%), Postives = 364/798 (45.61%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C+ Q + + I EE +++IGNI H++ + S + +P L+ +S+ G++ +S RID E +C + C E+E ++ +D I I + V D NDN P F P +++ EN I + A D D T N VH+Y F LD P LIV++ LD E K Y ++ D ++ +T L++ V D NDN P F + + ++ I EN PVG ++ ++A D D +I Y F R F + TG I +Q+ L + +K V A+D + A A I I V D+NDN+P I N + ++E DP ++ + V+D D VN V C + + F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L ++EN + + +SA+D D + + PN +F +D TG + + R DRE ER + D Q VI+ +LDENDN P F F +SENL YS V G I TD D E + +L D++N I +P +SG I + DRE +YT ++RA D G P S+ TI V D NDN P + P S+ V ++A PG ++ ++ A D D G N+ + Y++++ N + LF ++ VTG + + + IG +L + SD G P H +F+F+N Sbjct: 5 DFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVIL--------PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSS---SPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVRLSILNDNEN-FILDP-----DSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLSAI--PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHTLVLVFLFVN 774
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: CR847522.1 (pep chromosome:GRCz11:CHR_ALT_CTG6_1_1:4874141:4879379:1 gene:ENSDARG00000111493.1 transcript:ENSDART00000185190.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR847522.1) HSP 1 Score: 257.684 bits (657), Expect = 2.077e-70 Identity = 235/794 (29.60%), Postives = 364/794 (45.84%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C+ Q + + I EE +++IGNI H++ + S + +P L+ +S+ G++ +S RID E +C E+ EC + ++ +D I I + V D NDN P F P +++ EN I + A D D T N VH+Y F LD P LIV++ LD E K Y ++ D ++ +T L++ V D NDN P F + + ++ I EN PVG ++ ++A D D +I Y F R F + TG I +Q+ L + +K V A+D + A A I I V D+NDN+P I N + ++E DP ++ + V+D D VN V C + + F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L ++EN + + +SA+D D + + PN +F +D TG + + R DRE ER + D Q VI+ +LDENDN P F F +SENL YS V G I TD D E + +L D++N I +P +SG I + DRE +YT ++RA D G P S+ TI V D NDN P + P S+ V ++A PG ++ ++ A D D G N+ + Y++++ N + LF ++ VTG + + + IG +L + SD G P H +F+F+N Sbjct: 5 DFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSF--EDSECSFEIEVVIL--PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSS---SPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVRLSILNDNEN-FILDP-----DSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLSAI--PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHTLVLVFLFVN 774
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 256.914 bits (655), Expect = 3.563e-70 Identity = 235/798 (29.45%), Postives = 364/798 (45.61%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C+ Q + + I EE +++IGNI H++ + S + +P L+ +S+ G++ +S RID E +C + C E+E ++ +D I I + V D NDN P F P +++ EN I + A D D T N VH+Y F LD P LIV++ LD E K Y ++ D ++ +T L++ V D NDN P F + + ++ I EN PVG ++ ++A D D +I Y F R F + TG I +Q+ L + +K V A+D + A A I I V D+NDN+P I N + ++E DP ++ + V+D D VN V C + + F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L ++EN + + +SA+D D + + PN +F +D TG + + R DRE ER + D Q VI+ +LDENDN P F F +SENL YS V G I TD D E + +L D++N I +P +SG I + DRE +YT ++RA D G P S+ TI V D NDN P + P S+ V ++A PG ++ ++ A D D G N+ + Y++++ N + LF ++ VTG + + + IG +L + SD G P H +F+F+N Sbjct: 5 DFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVIL--------PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSS---SPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVRLSILNDNEN-FILDP-----DSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLSAI--PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHTLVLVFLFVN 774
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 256.914 bits (655), Expect = 3.563e-70 Identity = 235/798 (29.45%), Postives = 364/798 (45.61%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C+ Q + + I EE +++IGNI H++ + S + +P L+ +S+ G++ +S RID E +C + C E+E ++ +D I I + V D NDN P F P +++ EN I + A D D T N VH+Y F LD P LIV++ LD E K Y ++ D ++ +T L++ V D NDN P F + + ++ I EN PVG ++ ++A D D +I Y F R F + TG I +Q+ L + +K V A+D + A A I I V D+NDN+P I N + ++E DP ++ + V+D D VN V C + + F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L ++EN + + +SA+D D + + PN +F +D TG + + R DRE ER + D Q VI+ +LDENDN P F F +SENL YS V G I TD D E + +L D++N I +P +SG I + DRE +YT ++RA D G P S+ TI V D NDN P + P S+ V ++A PG ++ ++ A D D G N+ + Y++++ N + LF ++ VTG + + + IG +L + SD G P H +F+F+N Sbjct: 5 DFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVIL--------PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSS---SPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVRLSILNDNEN-FILDP-----DSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLSAI--PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHTLVLVFLFVN 774
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016]) HSP 1 Score: 250.751 bits (639), Expect = 3.110e-68 Identity = 232/817 (28.40%), Postives = 369/817 (45.17%), Query Frame = 1 Query: 22 FQHFYMFQCLLNSLKF*KLLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVECILKTTIMAKD-KSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSG-------NSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFR-LDAVGNE---IYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGE--PNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVAR-LLP--IGQFQLFLRASDNGRPPRHNETSLFIFIN 2367 +HF Q LL+S F + I L C T+ +++ EE P + +IG++ + + + +P+L++ K GD+ + + ID E++ + E C L+ + D I + + D+NDN P+F P T+++ EN +G + A D D+ S N + Y E T F+L + +LP LIV LD E++ Y ++ D + ++ L I + D NDN P F + Y+ E+ EN PVG ++ V+A D D ++ Y H+ S +R I NTG I ++ + + KF V A D + + A + I VKD NDN+P I + G + I+E P L +V+D D G NA V+C + R GN+ Y L + DYE +E + EI D G+P + SL V V D+N+ AP F +++ E + G +L V A+D D A L YS TG P F I+P+TG+++ + +LDRE ++ + + D G TV+++VLD NDN P F+ F++ EN+ S V G + D D+ E N +V QL D+ I + IL+ DRE Y+ ++A D G P S++ TI V D+NDN P P +S + + P + ++A D D G NS + ++++ N GE+ +A+ P IG +L ++ D G PPR + I++N Sbjct: 17 LRHFSPLQPLLHSALFNYAM-----LVWILLLLCCSANVVNTILYQVTEEQPPNTLIGSLASDQGLPDTGHLYKLEVGAPYLRVDGKTGDIYTTENSIDRESLKDCRNLF-EGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGS-NGIADYALTTGPEATNLFSLQVAQDSDEKLPQ--LIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMR-LLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQS-KSSKALVTITVKDQNDNAPSI-RIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRV-MSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPV-GMVTVNDHDEGE-NARV--QLSVEPDNGKFMIQNGTYT------ILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKF----LDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVN 806 HSP 2 Score: 93.9745 bits (232), Expect = 7.598e-19 Identity = 150/653 (22.97%), Postives = 264/653 (40.43%), Query Frame = 1 Query: 388 SSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI----GLI-VKKPLDYEVKSQYFATLEACDTNKQC-NTQAL-EIHVLDQNDNYPSF--------SQQEYQIEILENFPVGQQIIAVEAIDKDSD---LFNKIIYG--------FHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEP-NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDK----DKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQ-ATDPDYGEN--SNVTYSVMNNNKLLFIL 2238 S + S + ++++D NDN PKF + + EN P+G + +A D+D V Y +P+ RL SI G+I VK +D E S ++A D Q +++AL I V DQNDN PS + ++ I E+ PVG + VE D+D + ++ G E ++ R F+ T L + ++Y+ ++ A D A + ++ ++V D+NDN+P + + E P ++ + TD D G NA ++ + + + F ++ E+ +S + D E + + D G P ++ V V D N+ P+F + + EN + V+ +D D + + EP N F I T I S I DRE + D + P++ + I VLDENDN P + SSY + R + + ++I+ + +L N +F+++ GEI K+ + + + ++ D G P IYV + N V+ H + +S Y +++ A DPDY + SN+ ++V+ ++ ++ Sbjct: 251 SPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEV-TYSLHQPSSPV----MRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTL--------LDYERIKEYRIEIVAVDSGNPAL-SSTNSLKVQVTDMNDNAPVFSPTLYEVEF-FEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQL---DREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKFMIQNGTYTILSTIS-FDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPAN--------SSYKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGN---PHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNETIGN----VS--------HVEGLVGHSL--YTPLEMDIAGDPDYSRDPHSNILFAVLGGFSVVILI 859
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 271.166 bits (692), Expect = 7.038e-75 Identity = 244/815 (29.94%), Postives = 385/815 (47.24%), Query Frame = 1 Query: 55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGN------EIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367 NSLK ++ C ++LF+ L GS V +++ EE P +++IG++ + + + + K P+L++ K GD+ + + ID E++ + E +C L+ + D S ++ + + D NDN P F P T+++ EN IG + A D D + N V Y + E F L DQ + P LIV LD E + Y T++ D T + ++ L I +LD NDN P F + Y+ E+ EN P+G ++ V+A D D + +I Y FH+ SD +R + +TG I +Q + + KF V A DK A A + I ++D NDN P I T G + I D P E + +QV+D D GVNA V+C + F+L V + + Y L + + DYE+ +E EI D G+P + SL V V D+N+ AP F + ++ EN + +++VSA+D D + L YS +P+ F+I+P +GQI+ LDRE E + +++ D G +V+I VLD NDN P F+ F++ EN+ S V G + D DK E N + ++ F QN +G IL+ DRE YT ++A D G P S++ TI V D+NDN P V P I +T + PG + ++A D D G N+ + YS+ + N LF ++ GE+ + + + G +L ++ +D G+P RH + +IN Sbjct: 39 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRECQNLEPGE-KCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRD-SGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDV--PFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQNG-----------TGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 821
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 270.781 bits (691), Expect = 1.040e-74 Identity = 246/817 (30.11%), Postives = 387/817 (47.37%), Query Frame = 1 Query: 55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSC--------QLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367 NSLK ++ C ++LF+ L GS V +++ EE P +++IG++ + + + + K P+L++ K GD+ + + ID E++ + E +C L+ + D S ++ + + D NDN P F P T+++ EN IG + A D D + N V Y + E F L DQ + P LIV LD E + Y T++ D T + ++ L I +LD NDN P F + Y+ E+ EN P+G ++ V+A D D + +I Y FH+ SD +R + +TG I +Q + + KF V A DK A A + I ++D NDN P I T G + I D P E + +QV+D D GVNA V+C QL Q ++D D+ + Y L + + DYE+ +E EI D G+P + SL V V D+N+ AP F + ++ EN + +++VSA+D D + L YS +P+ F+I+P +GQI+ LDRE E + +++ D G +V+I VLD NDN P F+ F++ EN+ S V G + D DK E N + ++ F QN +G IL+ DRE YT ++A D G P S++ TI V D+NDN P V P I +T + PG + ++A D D G N+ + YS+ + N LF ++ GE+ + + + G +L ++ +D G+P RH + +IN Sbjct: 39 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRECQNLEPGE-KCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRD-SGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ--VSDTGSDS--KKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQN-----------GTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 821
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 271.166 bits (692), Expect = 2.001e-74 Identity = 246/817 (30.11%), Postives = 387/817 (47.37%), Query Frame = 1 Query: 55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSC--------QLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367 NSLK ++ C ++LF+ L GS V +++ EE P +++IG++ + + + + K P+L++ K GD+ + + ID E++ + E +C L+ + D S ++ + + D NDN P F P T+++ EN IG + A D D + N V Y + E F L DQ + P LIV LD E + Y T++ D T + ++ L I +LD NDN P F + Y+ E+ EN P+G ++ V+A D D + +I Y FH+ SD +R + +TG I +Q + + KF V A DK A A + I ++D NDN P I T G + I D P E + +QV+D D GVNA V+C QL Q ++D D+ + Y L + + DYE+ +E EI D G+P + SL V V D+N+ AP F + ++ EN + +++VSA+D D + L YS +P+ F+I+P +GQI+ LDRE E + +++ D G +V+I VLD NDN P F+ F++ EN+ S V G + D DK E N + ++ F QN +G IL+ DRE YT ++A D G P S++ TI V D+NDN P V P I +T + PG + ++A D D G N+ + YS+ + N LF ++ GE+ + + + G +L ++ +D G+P RH + +IN Sbjct: 39 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRECQNLEPGE-KCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRD-SGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ--VSDTGSDS--KKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQN-----------GTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 821
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 271.552 bits (693), Expect = 2.303e-74 Identity = 245/819 (29.91%), Postives = 386/819 (47.13%), Query Frame = 1 Query: 55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVE----CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGN------EIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367 NSLK ++ C ++LF+ L GS V +++ EE P +++IG++ + + + + K P+L++ K GD+ + + ID E++ C+ +E C L+ + D S ++ + + D NDN P F P T+++ EN IG + A D D+ N V Y + E F L DQ + P LIV LD E + Y T++ D T + ++ L I +LD NDN P F + Y+ E+ EN P+G ++ V+A D D + +I Y FH+ SD +R + +TG I +Q + + KF V A DK A A + I ++D NDN P I T G + I D P E + +QV+D D GVNA V+C + F+L V + + Y L + + DYE+ +E EI D G+P + SL V V D+N+ AP F + ++ EN + +++VSA+D D + L YS +P+ F+I+P +GQI+ LDRE E + +++ D G +V+I VLD NDN P F+ F++ EN+ S V G + D DK E N + ++ F QN +G IL+ DRE YT ++A D G P S++ TI V D+NDN P V P I +T + PG + ++A D D G N+ + YS+ + N LF ++ GE+ + + + G +L ++ +D G+P RH + +IN Sbjct: 31 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRE-----CQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDS-GVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDV--PFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQNG-----------TGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 813
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 271.552 bits (693), Expect = 2.478e-74 Identity = 247/821 (30.09%), Postives = 388/821 (47.26%), Query Frame = 1 Query: 55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVE----CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSC--------QLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367 NSLK ++ C ++LF+ L GS V +++ EE P +++IG++ + + + + K P+L++ K GD+ + + ID E++ C+ +E C L+ + D S ++ + + D NDN P F P T+++ EN IG + A D D+ N V Y + E F L DQ + P LIV LD E + Y T++ D T + ++ L I +LD NDN P F + Y+ E+ EN P+G ++ V+A D D + +I Y FH+ SD +R + +TG I +Q + + KF V A DK A A + I ++D NDN P I T G + I D P E + +QV+D D GVNA V+C QL Q ++D D+ + Y L + + DYE+ +E EI D G+P + SL V V D+N+ AP F + ++ EN + +++VSA+D D + L YS +P+ F+I+P +GQI+ LDRE E + +++ D G +V+I VLD NDN P F+ F++ EN+ S V G + D DK E N + ++ F QN +G IL+ DRE YT ++A D G P S++ TI V D+NDN P V P I +T + PG + ++A D D G N+ + YS+ + N LF ++ GE+ + + + G +L ++ +D G+P RH + +IN Sbjct: 39 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRE-----CQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDS-GVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ--VSDTGSDS--KKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQNG-----------TGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 821
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 261.922 bits (668), Expect = 5.627e-72 Identity = 232/783 (29.63%), Postives = 365/783 (46.62%), Query Frame = 1 Query: 148 VTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVE---CILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 V +K+ EE P + +IG++ + + + + +P+L++ K GD+ + + ID E + C ++ CIL+ + D + S + + V D NDN P F P T+ + EN IG + A D DA N V Y + E F L + + P LIV LD E Y T++ D + ++ L + VLD NDN P F + Y+ E+ EN P+G +I V+A D D +I Y FH+ + +R + NTG I +Q + + +F V A D+ A A A + + VKD+NDN+P I T G + I + + + +QV+D D G NA V+C + R + + Y L + DYE ++ EI D G+P + SL V V D+N+ AP F + ++ EN + G + +V+ASD D A L YS EP FTI P G+I+ LDRE + E+ ++ D G TV++ VLD NDN P F+ +SG F++ EN+ + S V G + D DK E N +V ++ F QN +G IL+ DRE YT +++A D G+P SA+ TI V D+NDN P P ++ H + +T + G + ++ A D D G N+ +TYS+ N LF + +G + + + + G +L ++ SD G+PPR+ + +++N Sbjct: 38 VVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL----RECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGATP-KSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKT-SLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NARVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTS---HRL-LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 791
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692]) HSP 1 Score: 261.922 bits (668), Expect = 5.627e-72 Identity = 232/783 (29.63%), Postives = 365/783 (46.62%), Query Frame = 1 Query: 148 VTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVE---CILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 V +K+ EE P + +IG++ + + + + +P+L++ K GD+ + + ID E + C ++ CIL+ + D + S + + V D NDN P F P T+ + EN IG + A D DA N V Y + E F L + + P LIV LD E Y T++ D + ++ L + VLD NDN P F + Y+ E+ EN P+G +I V+A D D +I Y FH+ + +R + NTG I +Q + + +F V A D+ A A A + + VKD+NDN+P I T G + I + + + +QV+D D G NA V+C + R + + Y L + DYE ++ EI D G+P + SL V V D+N+ AP F + ++ EN + G + +V+ASD D A L YS EP FTI P G+I+ LDRE + E+ ++ D G TV++ VLD NDN P F+ +SG F++ EN+ + S V G + D DK E N +V ++ F QN +G IL+ DRE YT +++A D G+P SA+ TI V D+NDN P P ++ H + +T + G + ++ A D D G N+ +TYS+ N LF + +G + + + + G +L ++ SD G+PPR+ + +++N Sbjct: 38 VVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL----RECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGATP-KSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKT-SLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NARVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTS---HRL-LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 791
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 254.218 bits (648), Expect = 3.482e-70 Identity = 238/794 (29.97%), Postives = 367/794 (46.22%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C + Q + + I EE P ++ IGNI H++ + ++ + +P +K+S G++ +S RID E +CA EE EC + ++ +D I I + V D NDN P F P +++ EN I + A D D T N V Y F LD P LIV++ LD E K Y ++ D T ++ +T L++ V D NDN P F + + ++ I EN PVG +I + A D D +I Y F + F + TG I +Q+ L + +K V A+D + A A + I V D+NDN P I N + ++E DP ++ + V+D D VN V C + ++ F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L + EN +G + +SA+D D + PN +F +D TG + + R +RE ER + D P Q VI+ VLDENDN P F F +SENL YS V G I TD+D E N V + + D++N + +P SG I + DRE +YT +++A D G P S+ TI V D NDN P ++P S+ V ++A PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + + + P +G +L + SD G P H +F+++N Sbjct: 5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTAS-RVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDEDAGE-NKAVTLSILN--DNEN-FVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSA--IPGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVN 775
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 254.218 bits (648), Expect = 7.814e-69 Identity = 238/794 (29.97%), Postives = 367/794 (46.22%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C + Q + + I EE P ++ IGNI H++ + ++ + +P +K+S G++ +S RID E +CA EE EC + ++ +D I I + V D NDN P F P +++ EN I + A D D T N V Y F LD P LIV++ LD E K Y ++ D T ++ +T L++ V D NDN P F + + ++ I EN PVG +I + A D D +I Y F + F + TG I +Q+ L + +K V A+D + A A + I V D+NDN P I N + ++E DP ++ + V+D D VN V C + ++ F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L + EN +G + +SA+D D + PN +F +D TG + + R +RE ER + D P Q VI+ VLDENDN P F F +SENL YS V G I TD+D E N V + + D++N + +P SG I + DRE +YT +++A D G P S+ TI V D NDN P ++P S+ V ++A PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + + + P +G +L + SD G P H +F+++N Sbjct: 5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDEDAGE-NKAVTLSILN--DNEN-FVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVN 775
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 254.218 bits (648), Expect = 7.814e-69 Identity = 238/794 (29.97%), Postives = 367/794 (46.22%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C + Q + + I EE P ++ IGNI H++ + ++ + +P +K+S G++ +S RID E +CA EE EC + ++ +D I I + V D NDN P F P +++ EN I + A D D T N V Y F LD P LIV++ LD E K Y ++ D T ++ +T L++ V D NDN P F + + ++ I EN PVG +I + A D D +I Y F + F + TG I +Q+ L + +K V A+D + A A + I V D+NDN P I N + ++E DP ++ + V+D D VN V C + ++ F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L + EN +G + +SA+D D + PN +F +D TG + + R +RE ER + D P Q VI+ VLDENDN P F F +SENL YS V G I TD+D E N V + + D++N + +P SG I + DRE +YT +++A D G P S+ TI V D NDN P ++P S+ V ++A PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + + + P +G +L + SD G P H +F+++N Sbjct: 5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDEDAGE-NKAVTLSILN--DNEN-FVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVN 775
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q08174|PCDH1_HUMAN (Protocadherin-1 OS=Homo sapiens OX=9606 GN=PCDH1 PE=1 SV=2) HSP 1 Score: 263.077 bits (671), Expect = 2.091e-71 Identity = 236/788 (29.95%), Postives = 368/788 (46.70%), Query Frame = 1 Query: 133 GSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETI--CAQHEMCCEEVECILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 G V +K+ EE P + +IG++ + F + K +P+L++ K GD+ + + ID E + C Q+++ + CIL+ + D + S + + V D NDN P F P T+ + EN IG + A D DA N V Y + E F L + + P LIV LD E Y T++ D + ++ L + VLD NDN P F + Y+ E+ EN P+G +I V+A D D +I Y FH+ + +R + NTG I +Q + + +F V A D+ A A + + VKD+NDN+P I T G + I + + + +QV+D D G NA V+C + R + + Y L + DYE ++ EI D G+P + SL V V D+N+ AP F + ++ EN + G I +++ASD D A L YS EP FTI P TG+I+ LDRE E E+ ++ D G TV++ VLD NDN P F+ +SG F++ EN+ + S V G + D DK E N +V ++ F QN +G IL+ DRE YT +++A D G+P SA+ TI V D+NDN P P ++ H + +T + G + ++ A D D G N+ + YS+ N LF + +G + + + + G +L ++ SD G+PPR+ + +++N Sbjct: 55 GHATRVVYKVPEEQPPNTLIGSLAADY-GFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLREC-QNQLPGDP--CILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDR-GTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKT-SLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NAQVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTS---HKL-LTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 813
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q9HC56|PCDH9_HUMAN (Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2) HSP 1 Score: 256.144 bits (653), Expect = 1.468e-68 Identity = 237/794 (29.85%), Postives = 363/794 (45.72%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C + Q + + I EE P ++ IGNI H++ + ++ + +P +K+S G++ +S RID E +CA EE EC + ++ +D I I + V D NDN P F P +++ EN I + A D D T N V Y F LD P LIV++ LD E K Y ++ D T ++ +T L++ V D NDN P F + + ++ I EN PVG +I + A D D +I Y F + F + TG I +Q+ L + +K V A+D + A A + I V D+NDN P I N + ++E DP ++ + V+D D VN V C + ++ F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L + EN +G + +SA+D D + PN +F +D TG + + R DRE ER + D P Q VI+ VLDENDN P F F +SENL YS V G I TD D E N V + + + + +P SG I + DRE +YT +++A D G P S+ TI V D NDN P ++P S+ V ++A PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + + + P +G +L + SD G P H +F+++N Sbjct: 5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE-NKAVTLSI---LNDNDNFVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVN 775
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6KEQ9|PC11X_PIG (Protocadherin-11 X-linked OS=Sus scrofa OX=9823 GN=PCDH11X PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.439e-64 Identity = 229/777 (29.47%), Postives = 343/777 (44.14%), Query Frame = 1 Query: 106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH-LHPSFNKASYFIKSPFLKLSDK-GDLML-------------SSRIDLETICAQ---HEMCCEEVE-CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRP 2328 + L + +Q Q + I EE P +++IG+++ L+ S KL K GD+ L +RID E +CA C EVE +L I + I + D NDN P F +++ EN I L +D D T N V Y + F LD P LIV+K LD E K Y ++ D ++ +T L++ V D NDN P F + E ++ I EN PVG + + A D D KI + F L N + F + TG I +++ L + +K V A+D A A + + V D+NDN P I N + ++E P ++ + VTD D N VSC + FRL V + + L + DYE+ RE ++ D G P L + VKD N+ AP F + F L + EN G + ++SA D D A + Y + F +D TG I + +++LDRE E+ ++ D P TV++ VLD+NDN P F F + ENL + V G I TD D E N+ V+ + D+ + +P ++G I DRE +YT ++A D G S+ TI V D NDN P +V P SS+ V + N PG ++ + A D D G N+ + YS++ N K LFI++Q +G + + +G +L ++A D G+P Sbjct: 12 VLLACIVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDRSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVVDAHCFYEVEVAVLPDEIF---------RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPATIDPD-TGINGVQNYHLIKGQSIFGLDVIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGSSVTQLHATDADIGENAKIHFYFSNLISNMAKKLFHLNSTTGLITIKEPLDREESPNHKLLVLASDG---GLTPARAMVLVNVTDINDNIPSIDIRYIINPINGTVVLSENAPLNTKIALITVTDKDADHNGWVSC--FTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFLSLSVPENNSPGTQLTKISAMDADSGRNAEINYLLGFDAPSEFNLDHRTG-ILTAVKKLDREKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEYNFYVPENLPRHGTV-GLITVTDPDYGE-NSAVILSI---LDANDDFTIDP-----QTGVIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVTINVVDVNDNKPVFVVP-SSNYSFELVPPSTN--PGTVVFTVVAIDNDTGMNAELRYSMVGGNTKGLFIIDQTSGNITLKEKCVFADLGLHRLVVKAKDLGQP 759
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.735e-63 Identity = 226/782 (28.90%), Postives = 351/782 (44.88%), Query Frame = 1 Query: 106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH-----LHP--SFNKASYFI------KSPFLKLS-DKGDLMLS-SRIDLETICA---QHEMCCEEVE-CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQL-----QHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRP 2328 + L + + Q + I EE P +++IG+++ L P S A F P +++ D G++ + +RID E +CA + E C EVE IL I + I + D NDN P F +++ EN I L A+D D N V Y + F LD P LIV+K LD E K Y ++ D ++ +T L++ V D NDN+P F + E ++ I EN PVG + + A D D KI + F L N R F + TG I +++ L + +K V A+D M A A + + V D+NDN P I N + ++E P ++ + VTD D N V+C + FRL V + + L + DYE+ +E ++ D G P L + VKD N+ AP F + F + + EN G + +VSA+D D A + Y + F++D TG + + +++LDRE ++ I+ D P T TV + ++D+NDN P F F + ENL + V G I TD D + N+ V + T DSQ +G I DRE +YT ++A D G S+ TI V D NDN P ++ P S++ V + N PG ++ ++ A D D G N+ V YS++ N + LF ++Q TG + + + +G ++ ++A+D G+P Sbjct: 12 VLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIF---------RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDV-GTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLM---PARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC--FTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGML-TVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTV-GLITVTDPDYGD-NSAVTLSILDENDDFTIDSQ-------------TGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNY-SYELVLPSTN--PGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759 HSP 2 Score: 122.094 bits (305), Expect = 1.586e-26 Identity = 129/455 (28.35%), Postives = 212/455 (46.59%), Query Frame = 1 Query: 1069 VKDLNDNSPKITSLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAV----GNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPND----YFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-------ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEIL--TVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364 ++D+NDN+P + N I I E +TL D D+G N + +L++ N F LD + G+++ L + D E + +++ D G P+ + L V V D N+ P F++ ++ + EN G ++ Q+ A+D D +A + +SF+ ++ F ++ TG I LDRE ++ ++ +D P + V++ V D NDN P+ IDI + N +SEN+ +K+ I TDKD D N +V H + R P+F S + L T LD E Y +++ A D G P L+ I V+D+NDN P + TV+I N+ PG + K+ ATD D G N+ + Y + + F L++ TG L V + L ++ + A DNG PP + ++F+ I Sbjct: 129 IEDINDNAPLFPATVIN--ISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQ-NIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIK-EPLDREETPNHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPS-IDIRYIVNPVNDTVVLSENIPLNTKI-ALITVTDKDADH-NGRVTCFTDHEIPFRLR----PVF----SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQ------SFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSI 560
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.813e-63 Identity = 226/782 (28.90%), Postives = 351/782 (44.88%), Query Frame = 1 Query: 106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH-----LHP--SFNKASYFI------KSPFLKLS-DKGDLMLS-SRIDLETICA---QHEMCCEEVE-CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQL-----QHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRP 2328 + L + + Q + I EE P +++IG+++ L P S A F P +++ D G++ + +RID E +CA + E C EVE IL I + I + D NDN P F +++ EN I L A+D D N V Y + F LD P LIV+K LD E K Y ++ D ++ +T L++ V D NDN+P F + E ++ I EN PVG + + A D D KI + F L N R F + TG I +++ L + +K V A+D M A A + + V D+NDN P I N + ++E P ++ + VTD D N V+C + FRL V + + L + DYE+ +E ++ D G P L + VKD N+ AP F + F + + EN G + +VSA+D D A + Y + F++D TG + + +++LDRE ++ I+ D P T TV + ++D+NDN P F F + ENL + V G I TD D + N+ V + T DSQ +G I DRE +YT ++A D G S+ TI V D NDN P ++ P S++ V + N PG ++ ++ A D D G N+ V YS++ N + LF ++Q TG + + + +G ++ ++A+D G+P Sbjct: 12 VLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIF---------RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDV-GTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLM---PARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC--FTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGML-TVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTV-GLITVTDPDYGD-NSAVTLSILDENDDFTIDSQ-------------TGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNY-SYELVLPSTN--PGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759 HSP 2 Score: 122.094 bits (305), Expect = 1.586e-26 Identity = 129/455 (28.35%), Postives = 212/455 (46.59%), Query Frame = 1 Query: 1069 VKDLNDNSPKITSLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAV----GNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPND----YFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-------ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEIL--TVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364 ++D+NDN+P + N I I E +TL D D+G N + +L++ N F LD + G+++ L + D E + +++ D G P+ + L V V D N+ P F++ ++ + EN G ++ Q+ A+D D +A + +SF+ ++ F ++ TG I LDRE ++ ++ +D P + V++ V D NDN P+ IDI + N +SEN+ +K+ I TDKD D N +V H + R P+F S + L T LD E Y +++ A D G P L+ I V+D+NDN P + TV+I N+ PG + K+ ATD D G N+ + Y + + F L++ TG L V + L ++ + A DNG PP + ++F+ I Sbjct: 129 IEDINDNAPLFPATVIN--ISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQ-NIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIK-EPLDREETPNHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPS-IDIRYIVNPVNDTVVLSENIPLNTKI-ALITVTDKDADH-NGRVTCFTDHEIPFRLR----PVF----SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQ------SFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSI 560
BLAST of Protocadherin vs. TrEMBL
Match: A0A4S2LI76 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_008677 PE=4 SV=1) HSP 1 Score: 422.935 bits (1086), Expect = 5.442e-124 Identity = 316/952 (33.19%), Postives = 484/952 (50.84%), Query Frame = 1 Query: 76 LLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHL---HPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCE-EVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKF---VKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK--EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAF--HKA-------------VANIFIKVKDLNDNSP--KITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-------INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI-----------KSGI--RRLDREMVERIEINIIVTDAIENPKTGQC------------------------------TVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG--LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVAR--------------------LLPIGQFQLFLRASDNGRPPRHNETSLFI-FINGDEV--ATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQ-----NSFEPPKTSNHHVTGT-------WGHHTDEGSY 2589 LL + + F F+ Y + + + F + EES + IGNI HP+ S F ++ G + L+ R+DLE++C ++ +CC+ E C L +++ + +S + + + I V + D NDN P F + Q + V+E +G L A+D D + N+V +Y E F LD S P++ L + + LDYE + Y +LEACD + C Q L I V D NDN P F + Y + + ENF VGQ ++ +EA D DS + ++ + FH +D ++ NTF + NTG + L+ +L+A R +YKF V + + A H + +A++ I V+DLND SP K+ S S ++ + E PP + +QVTD D G N V+C+L+Q ++ F L G ++Y+LS+ RSFD E E ++ I C D GSP+ + + L + ++DINEF P +K + EN E G ++++SA D D SA L Y + + YF +DP TG I +G+ LDRE ER+ + V+D P T C TV + VLD+NDN P FI+ G F+++EN +++V GR+ A D+D E N +V + L+ ++ S N + +F+V G I T++ LDRE + YT+E+ A D+ P+ ++ N T+ V D+NDN P W P H VNITA+ PPG++I ++ ATD D EN V YS+++ + + +F ++ TG++ VA+ LLP G ++L LRASD G P ET L + + D V A LN II+V++G+TG ISI L+IAIICVRRR ++ + GS N F P + S G +G+ D Y Sbjct: 9 LLAVCLGFFCAFVSYSTTEQTTPVLRFVVNEESALRTTIGNISAYLLPHPTIT-----TDSKFFDVTTTGLVQLARRLDLESLCTENFLCCKLEQPCELSFSVVIESGTSREMQPLEIRVRILDINDNVPSFGPNSENGQVLEVSEMAKVGSLFSLTPAVDRDVSKENQVQRYTLHGVELLRMFELDDSEPPNVRLRLVRSLDYEKTTSYTGSLEACDP-RSCMRQNLTIRVTDANDNPPRFVKSTYSVSVPENFTVGQMVLQLEAEDIDSPPYAQMDFRFHGTADQDLYNTFRLERNTGRVVLRTRLAAHRRSEYKFDVSVVEGSSTAIMDHGSSTSVSNPILGSSNLAHVTITVEDLNDFSPNIKMFSPSEGQQLSVPENSPPTRVCVVQVTDSDSGDNGRVACRLVQSAASASETTLDSFVLSNAG-KLYTLSTTRSFDAEREPQVAVTIVCTDFGSPQRSSGRDLVIKIEDINEFPPELDKTTYHAAVYENAEAGVEVVRISARDPDHSAKLYYELSAQGKQYFHVDPLTGSILTIGETGTDFDSAGLLSSTLDREKTERVTFTVCVSDG---PPTSVCGGGDNNSKPSVRKMKQGSNTESTHAHTVSATVFVTVLDQNDNRPHFIE-KGPFSVAENQPRFTQVSGRLVAIDQDDGE-NGRVRYSLRQSWKSANGAPAPDLFQVDADGRIQTMEVLDRETTNAYTLELMACDSAPQTPLCTS-LNATVTVLDENDNKPIWRYP---HDQDKEVNITADLPPGHVIARVHATDQDAAENGRVVYSLIDPHRRTVFQVDNKTGDIAVAQSNPAAPSEANFQPSANKPSPLLP-GIYRLRLRASDQGHPQLVAETWLQVNVFSTDTVVSAGLNFMIIVVMVGVTGLISICLVIAIICVRRR-SFSLRASHGSHDRTRSNGFRPGRDSGDGAEGVHFPLKHDYGYPVDSTGY 942
BLAST of Protocadherin vs. TrEMBL
Match: A0A074ZL43 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_05267 PE=4 SV=1) HSP 1 Score: 422.165 bits (1084), Expect = 9.591e-124 Identity = 315/952 (33.09%), Postives = 486/952 (51.05%), Query Frame = 1 Query: 76 LLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHL---HPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCE-EVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKF---VKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK--EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAF--HKA-------------VANIFIKVKDLNDNSP--KITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-------INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI-----------KSGI--RRLDREMVERIEINIIVTDAIENPKTGQC------------------------------TVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG--LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVAR--------------------LLPIGQFQLFLRASDNGRPPRHNETSLFI-FINGDEV--ATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQ-----NSFEPPKTSNHHVTGT-------WGHHTDEGSY 2589 LL + + F F+ Y + + + F + EES + IGNI HP+ S F ++ G + L+ R+DLE++C ++ +CC+ E C L +++ + +S + + + I V + D NDN P F + Q + V+E +G L A+D D + N+V +Y E F LD S P++ L + + LDYE + Y +LEACD + C Q L I + D NDN P F + Y + + ENF VGQ ++ +EA D DS + ++ + FH +D ++ NTF + NTG + L+ +L+A R +YKF V + + A H + +A++ I V+DLND SP K+ S S ++ + E PP + +QVTD D G N V+C+L++ ++ F L G ++Y+LS+ RSFD E E ++ I C D GSP+ + + L + ++DINEF P +K + EN E G ++++SA D D SA L Y + + YF +DP TG I +G+ LDRE ER+ + V+D P T C TV + VLD+NDN P FI+ G F+++EN +++V GR+ A D+D E N +V + L+H++ S N + +F+V G I T++ LDRE + YT+E+ A D+ P+ ++ N T+ V D+NDN P W P H VNITA+ PPG++I ++ ATD D EN V YS+++ + + +F ++ TG++ VA+ LLP G ++L LRASD G P + ET L + + D V A LN II+V++G+TG ISI L+IAIICVRRR ++ + GS N F P + S G +G+ D Y Sbjct: 9 LLAVYLGFFCAFVSYSNTEQATPVLRFVVNEESALRTTIGNISAYLLPHPTIT-----TDSKFFDVTTTGLVQLARRLDLESLCTENFLCCKLEQPCELSFSVVIESGTSREMQPLEIRVRILDINDNVPSFGPNSENGQVLEVSEMAKVGSLFSLTPAVDRDVSKENQVQRYTLHGVELLRMFELDDSEPPNVRLRLVRSLDYEKTTSYTGSLEACDP-RSCMRQNLTIRITDANDNPPRFVKNTYSVNVPENFTVGQVVLQLEAEDIDSPPYAQMDFRFHGTADQDLYNTFRLERNTGRVVLRTRLAAHRRSEYKFDVSVVEGSSTAIMDHGSSTSVSNPILGSSNLAHVTITVEDLNDFSPNIKMFSPSEGQQLSVPENSPPTRVCVVQVTDSDSGDNGRVACRLVRSAASASETTLDSFVLSNAG-KLYTLSTTRSFDAEREPQVAVTIVCTDFGSPQRSSGRDLVIKIEDINEFPPELDKTTYHAAVYENAEAGVEVVRISARDPDHSAKLHYELSAQGKQYFHVDPLTGSILTIGDTGTDFDSAGLLSSTLDREKTERVTFTVCVSDG---PPTSVCGGDDSNSKPSMRAMKQGSNTESARTHTVSATVFVTVLDQNDNRPHFIE-KGPFSVAENQPRFTQVSGRLVAIDQDDGE-NGRVRYSLRHSWKSANGVPAPDLFQVDADGRIQTMEVLDRETTNAYTLELMACDSAPQTPLCTS-LNATVTVLDENDNKPIWRYP---HDQDKEVNITADLPPGHVIARVHATDQDAAENGRVVYSLIDPHRRTVFQVDNKTGDIAVAQSNPAAPSETNFQSNANKPSPLLP-GIYRLRLRASDQGHPQQVAETWLQVNVFSTDTVVSAGLNFMIIVVMVGVTGLISICLVIAIICVRRR-SFSLRASHGSHDRTRPNGFRPGRDSGDGAEGVHFPLKHDYGYPVDSTGY 942
BLAST of Protocadherin vs. TrEMBL
Match: A0A4E0RRX5 (Protocadherin-1 OS=Fasciola hepatica OX=6192 GN=D915_000244 PE=4 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 2.459e-123 Identity = 300/876 (34.25%), Postives = 454/876 (51.83%), Query Frame = 1 Query: 148 VTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCE-EVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPK----QTVNVAENEPIGFYLYLDRALDADATSANRVHQYIF--KEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKA------------------VANIFIKVKDLNDNSPKITSLS---GNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLL--QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI----KSGIRR---LDREMVERIEINIIVTD--------AIENPK--------------------------TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPM-LSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVAR------------------------LLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEV---ATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRR 2475 V FK+ EE+ + IGN+ + SPF K++ G + L+ R+DLET+C + +CC+ E C L T+ + +S+ + + V + D NDN P+F + Q V ++E G + L A D D +++ +Y+ + TF LD + LPS+ L + PLDYE +QY TLEACD+ + C +Q L + V+D+NDN P F + Y++ +LEN VGQ ++ +EAIDKDS + ++ + FH D +R TF + ++TG I LQ +L+A+ R +Y+F V +A VA +FIKV+DLND SP+I S G + I + E P+ + +QVTDDD+G N+ V+C ++ F L G + Y+LS+ R D E E I C D G+P + + L V V+D+NEF P + + + EN + G ++++ A DRD SA L Y E YF IDP +G I +G + LDRE E+I +++ VTD I P T TV + VLDENDN P F G F ++EN +++VRG++AA D D+ + N V + L+H + S + + +F+V G I T+ LDRE + YT+E+ A D+ L N T+ V+D+NDN P W P H VNIT++ PPG+LI++++A+D D G+N V Y +++ +K +F ++ TG++ +A LLP G ++L LRASD G P ET L + + G ++ A LN II+V++ +TG ISI L+IAIICVRRR Sbjct: 32 VQFKVEEEAHLHTTIGNVSRY--LLAQPRITSDSPFFKITTNGMVQLTHRVDLETLCLERSLCCDLEKPCELICTVAVESESTRAIRLLELRVHILDINDNAPQFATGQTDGQQVVQISELAEPGHMISLMPATDRDLAKEHQIQRYLIHGTQLQRTFELDYTDLPSVRLRLLTPLDYESVTQYSGTLEACDS-RSCTSQNLTVKVIDENDNRPVFLKHSYEVVVLENATVGQTVLQLEAIDKDSSVNAQMNFHFHGPIDPGLRETFRVEQDTGRIVLQSRLAAQRRIEYRFAVAVDGAKPVAIGPGPSDPSTSRAVTLNAGTPDVAKVFIKVQDLNDFSPQIRMFSPAEGQALI-VPENAQPQRVCVVQVTDDDVGENSQVTCDIVGPSGISGTFALTGSG-KYYTLSTTRILDAEVESRFTVTIACSDAGTPPRSSSRDLLVRVEDLNEFPPHLAQSTYQASVYENAKSGTEVVRIQAEDRDQSAKLYYDLKAESKQYFGIDPSSGVIFTLGDTGTQTSTVLDREKTEQITLHVCVTDGPSTSGGCGILEPDRQSLSSSSDRKDSTSGTSTSTSRLVYTASATVFVTVLDENDNRPVFTQ-KGPFFVTENQPRFTQVRGQLAAMDPDEGQ-NGLVRYSLRHIWVSADGTSASDLFQVDAQGVIRTMDVLDREKTNAYTLELVACDSAPKSPLCTTLNVTVTVDDENDNKPIWHYP---HDQDKEVNITSDLPPGHLIVRIRASDRDAGDNGRVVYHLIDPHKRTVFEVDNYTGDVAIAGAQHKRDMDDEVIPSGTGDPEPPSPLLP-GIYRLRLRASDLGHPQHSTETWLQVNVFGPQIMANAGLNFMIIVVMVAVTGLISICLVIAIICVRRR 896
BLAST of Protocadherin vs. TrEMBL
Match: H2KQG9 (Protocadherin-1 OS=Clonorchis sinensis OX=79923 GN=PCDH1 PE=4 SV=1) HSP 1 Score: 420.239 bits (1079), Expect = 5.246e-123 Identity = 312/931 (33.51%), Postives = 479/931 (51.45%), Query Frame = 1 Query: 76 LLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHL---HPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCE-EVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKF---VKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK--EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAF--HKA-------------VANIFIKVKDLNDNSP--KITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-------INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI-----------KSGI--RRLDREMVERIEINIIVTDAIENPKTG---------------------------QCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG--LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVAR--------------------LLPIGQFQLFLRASDNGRPPRHNETSLFIFI-NGDEV--ATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQ-----NSFEPPKTSNHHVTG 2556 L + + F F+ Y + + + F + EES + IGNI HP+ S F ++ G + L+ R+DLE++C ++ +CC+ E C L +++ + +S + + + I V + D NDN P F + Q + V+E +G L A+D D + N+V +Y E F LD S P++ L + + LDYE + Y +LEACD + C Q L I V D NDN P F + Y + + ENF VGQ ++ +EA D DS + ++ + FH +D ++ NTF + NTG + L+ +L+A R +YKF V + + A H + VA++ I V+DLND SP K+ S S ++ + E PP + +QVTD D G N V+C+L+Q ++ F L G ++Y+LS+ RSFD E E ++ I C D GSP+ + + L + ++DINEF P +K + EN E G ++++SA D D SA L Y + + YF +DP TG I +G+ LDRE ER+ + V+D N G TV + VLD+NDN P FI+ G F+++EN +++V GR+ A D+D E N +V + L+ ++ S N + +F+V G I T++ LDRE + YT+E+ A D+ P+ ++ N T+ V D+NDN P W P H VNITA+ PPG++I ++ ATD D EN V YS+++ + + +F ++ TG++ VA+ LLP G ++L LRASD G P + ET L + + + D V A LN II+V++G+TG ISI L+IAIICVRRR ++ + GS N F P + S G Sbjct: 9 LFAVCLGFFCAFVSYSNTEQTTPVLRFVVNEESALRTTIGNISAYLLPHPTIT-----TDSKFFDVTTLGLVQLARRLDLESLCTENFLCCKLEQPCELSFSVVIESGTSREMQPLEIRVKILDINDNVPSFGPNSENGQVLEVSEMAKVGSLFSLTPAVDRDVSKENQVQRYTLHGVELLRMFELDDSEPPNVRLRLVRSLDYEKTTSYTGSLEACDP-RSCMRQNLTIRVTDANDNPPRFVKNTYSVNVPENFTVGQTVLQLEAEDIDSPPYAQMDFRFHGTADQDLYNTFRLERNTGRVVLRTRLAAHRRSEYKFDVSVVEGSSTATMDHGSSTSVSNPILGSSNVAHVTITVEDLNDFSPNIKMFSPSEGQQLSVPENSPPTRVCVVQVTDSDSGDNGRVACRLVQSAASASETTLDSFVLSNAG-KLYTLSTTRSFDAEREPQVAVTIVCTDFGSPQRSSGRDLVIKIEDINEFPPELDKTTYHAAVYENAEAGVEVVRISARDPDHSAKLYYELSAQGKQYFHVDPLTGSILTIGDTGTDFDSAGLLSSTLDREKTERVTFTVCVSDGPPNSVCGGGESNSKPSMRTMKQGSNTESTHTHTVSATVFVTVLDQNDNRPHFIE-KGPFSVTENQPRFTQVSGRLVAIDQDDGE-NGRVRYSLRQSWKSANGAPAPDLFQVDADGRIQTLEVLDRETTNAYTLELMACDSAPQTPLCTS-LNATVTVLDENDNKPIWRYP---HDQDKEVNITADLPPGHVIARVHATDQDAAENGRVVYSLIDPHRRTVFQVDNKTGDIAVAQSNPAAPSETNFQPNANKPSPLLP-GIYRLRLRASDQGHPQQVAETWLQVNVFSTDNVVSAGLNFMIIVVMVGVTGLISICLVIAIICVRRR-SFSLRASHGSHDRTRPNGFRPGRDSGDGAEG 924
BLAST of Protocadherin vs. TrEMBL
Match: A0A4Z2DTZ9 (Protocadherin-1 isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_005628 PE=4 SV=1) HSP 1 Score: 409.453 bits (1051), Expect = 1.179e-122 Identity = 287/878 (32.69%), Postives = 434/878 (49.43%), Query Frame = 1 Query: 85 MKI-DFCIIFLFYL-----CYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVE-CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPK-QTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK--EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKA-------------VANIFIKVKDLNDNSPKITSLS--GNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYI---------------NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKS-------------GIRRLDREMVERIEINIIVTDAI----------------------------ENPK--------TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG-LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVAR------------------------LLPIGQFQLFLRASDNGRPPRHNETSLFI--FIN 2367 MK+ D+ +IF+ L + V KI EESP+ +GNI F+++ S F ++ G + L R+DLET+C + +CCE + C L + ++ + +S++ E + +++ + D ND+ P+F+ Q V ++E IG L L A DAD N++ +Y E TF LD S LP++ L + +PLDYE+ + Y +EACD +QC Q L I V+D NDN P F Q Y++ I ENF VGQ ++ + AIDKDS+L ++ + D N++ TF + ++G + LQ +L+A R +Y+F V ++ ++ AN+ I V+DLND SP I +S + I E + LQVTD+D+ N V C+L+ + F L GN Y+L + RSFD E E ++ I C D+G P + + L + V+D+NE+ P E+ ++EN + G ++QV A DRD +A L Y + E YFTIDP TG I + LDRE E+I ++ VTD NP T T+ + VLD NDN P FI G F+I EN ++++ GR+ A D D E N V + ++H + S S +F+V G+I T++ +DRE + YT+EI A D+ L L N TI V D+NDN P+W P H VNIT++ PPG ++ ++ A D D GEN V YS+++ +K +F ++ +TGE+ V + LLP G ++L LRASD G P + ET L + F+N Sbjct: 1 MKLNDYFLIFILQLIVSVNAFTSKPPIVKLKIDEESPLHTTLGNISSY--LFSQSKITSDSIFFTVTQNGLIQLIRRLDLETLCLEQALCCEHNKPCELTSNVVIEGVNSEELELVELNILIQDINDHVPQFISGNNQIVKISELAEIGSTLNLMPASDADLAPDNQIQRYAIHGVELQQTFELDTSDLPNVRLRLTQPLDYELTTNYSGIIEACD-RRQCAQQNLTILVIDANDNKPMFVQHSYELTIPENFSVGQTVLVLNAIDKDSELNARMDFRLQGDVDMNLKKTFRLDSHSGHLILQSRLAAHQRSEYRFSVTVSEVLSSQVQSIDALSSRIPVTSTDTANVIITVQDLNDFSPSIRMISPMEGKHLSIQENSAHVRVCVLQVTDNDLHDNGRVQCRLVANSFEPSSSTSDSHNSTSTDSFELTQTGNH-YTLLTTRSFDAELEPQLTVTIACTDYGVPPRSSSRELMIQVEDVNEYPPELERINYHASIMENVKSGIEVMQVVAHDRDQAAKLTYELSNEGKQYFTIDPITGVITTLGGDEKDENGNLLSFSLLDREKTEKITFSVCVTDGTPTNGCGLIALDHHSTMNNKEREKHSQQPANPLGDISRPVFTASATIFVTVLDVNDNQPQFI-TKGPFSILENQPRFTQINGRLTALDADAGE-NGHVRYSIRHIWISATGIPSPDVFEVDSEGQIRTMEVMDREQINAYTLEIVACDSAPLNPLCTELNITITVLDENDNKPEWHYP---HARDKEVNITSDLPPGRVVARILAMDLDTGENGRVIYSLIDPHKRTVFQIDNITGEISVVKNNLNELGQNGDGTYILDDSIHSTPLLP-GVYRLRLRASDMGHPEQATETWLQVSYFLN 868
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 262.692 bits (670), Expect = 1.864e-72 Identity = 236/794 (29.72%), Postives = 368/794 (46.35%), Query Frame = 1 Query: 97 FCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH---LHPSFNKASYFIKSPFLKLSDKGDLMLSSRI--DLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKIT------SLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGN------EIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 F + L + + + + EE P + +IG++ L S + + +P+L++ K + ++ I D ET+ + + C L+ + D +QS I + V D NDN P+F P T++V EN +G + +A D D T N V +Y E + F+L + +LP LIV LD E+K Y T+ A D T + ++ L + + D NDN P F + Y+ E+ EN PVG ++ V+A D D +I Y H+ SD + I +TG I ++ L + +KF V A DK + + + I+V D NDN+P + + I+E P L QV+D D G NA V+C + F+L G+ + Y L + DYE R+ + EI D G+P + SL V V D N+ +P F +++ E + G +L V A D D A L YS + + F IDP +G++++ LDRE ER E + D G TV+I+VLD NDN P F+ S F++ EN+ S V G + D DK E N +V QL D N + +G IL+ DRE +YT ++A D G P S++ TI V D+NDN P P +S ++ + P ++ ++A D DYG N+ + YS+ N LF ++ GE+++ + L G +L ++ SD G+P RH + I++N Sbjct: 8 FLLFALLVDSINSALGGILYHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLRVDGKTGEIFTTEIPIDRETL---KDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRD-TERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQ--LIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASD-PVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDK-GPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDV--PFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRAR-SPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPV-GMVTVLDMDKGE-NAQV--QLSVEPDVGNFVVQ------NGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNS----SFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVN 776 HSP 2 Score: 110.923 bits (276), Expect = 4.163e-24 Identity = 154/631 (24.41%), Postives = 255/631 (40.41%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDT--NKQCNTQALEIHVLDQNDNYPSF--------SQQEYQIEILENFPVGQQIIAVEAIDKDSD--------LFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE-LFTLQVTDDDIGVNANVSCQLLQQYIND------FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDIS-GVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYG---ENSNVTYSVM 2211 + V ++D NDN P+F K V+EN P+G+ + +A D+D + I + + Q S G+I VK PLD E S + + A D + + +T + I V DQNDN P+ + + I E+ PVG + V+ DKD + + + D+++ N + ++ L + + Y+ ++ A D A + ++ ++V D NDNSP + ++E E + P E + + D D G NA +L+ I D F +D E+ + S + D E++ + + D G P + ++ + V D N+ P+F +LEN + V+ D D + + EP+ F + TG I S I DRE + D E P++ V I VLDENDN P S F L++ V + A D D N ++++ + + +F ++ S GEI K+L R+ + + ++ D G P A IYV + N V L H ++ A DPDYG + SN+ Y + Sbjct: 229 LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIER-STGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDN-----KKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPAL-SSTNSLRVQVTDTNDNSPIFSPPL--FEVEFAEENQPGEKVLDVIALDADSGTNA----ELVYSIIADSSTRGLFEIDPSSGEVRARSPL---DREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSIS-FDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGS-NAELVYSIAGGNPHE-------LFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISN-VSLVEGLVGHSLYTPLDTDI------------AGDPDYGLAAQRSNIVYGSL 821
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 263.848 bits (673), Expect = 4.909e-72 Identity = 235/797 (29.49%), Postives = 368/797 (46.17%), Query Frame = 1 Query: 97 FCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH---LHPSFNKASYFIKSPFLKLSDKGDLMLSSRI--DLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKIT------SLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGN------EIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 F + L + + + + EE P + +IG++ L S + + +P+L++ K + ++ I D ET+ + + C L+ + D +QS I + V D NDN P+F P T++V EN +G + +A D D T N V +Y E + F+L + +LP LIV LD E+K Y T+ A D T + ++ L + + D NDN P F + Y+ E+ EN PVG ++ V+A D D +I Y H+ SD + I +TG I ++ L + +KF V A DK + + + I+V D NDN+P + + I+E P L QV+D D G NA V+C + F+L G+ + Y L + DYE R+ + EI D G+P + SL V V D N+ +P F +++ E + G +L V A D D A L YS + + F IDP +G++++ LDRE ER E + D G TV+I+VLD NDN P F+ S F++ EN+ S V G + D DK E N +V ++ F QN +G IL+ DRE +YT ++A D G P S++ TI V D+NDN P P +S ++ + P ++ ++A D DYG N+ + YS+ N LF ++ GE+++ + L G +L ++ SD G+P RH + I++N Sbjct: 44 FLLFALLVDSINSALGGILYHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLRVDGKTGEIFTTEIPIDRETL---KDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRD-TERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQ--LIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASD-PVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDK-GPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDV--PFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRA-RSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPV-GMVTVLDMDKGE-NAQVQLSVEPDVGNFVVQN-----------GTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNS----SFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVN 812 HSP 2 Score: 112.464 bits (280), Expect = 1.388e-24 Identity = 154/631 (24.41%), Postives = 255/631 (40.41%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDT--NKQCNTQALEIHVLDQNDNYPSF--------SQQEYQIEILENFPVGQQIIAVEAIDKDSD--------LFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE-LFTLQVTDDDIGVNANVSCQLLQQYIND------FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDIS-GVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYG---ENSNVTYSVM 2211 + V ++D NDN P+F K V+EN P+G+ + +A D+D + I + + Q S G+I VK PLD E S + + A D + + +T + I V DQNDN P+ + + I E+ PVG + V+ DKD + + + D+++ N + ++ L + + Y+ ++ A D A + ++ ++V D NDNSP + ++E E + P E + + D D G NA +L+ I D F +D E+ + S + D E++ + + D G P + ++ + V D N+ P+F +LEN + V+ D D + + EP+ F + TG I S I DRE + D E P++ V I VLDENDN P S F L++ V + A D D N ++++ + + +F ++ S GEI K+L R+ + + ++ D G P A IYV + N V L H ++ A DPDYG + SN+ Y + Sbjct: 265 LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIER-STGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDN-----KKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPAL-SSTNSLRVQVTDTNDNSPIFSPPL--FEVEFAEENQPGEKVLDVIALDADSGTNA----ELVYSIIADSSTRGLFEIDPSSGEVRARSPL---DREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSIS-FDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGS-NAELVYSIAGGNPHE-------LFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISNV-SLVEGLVGHSLYTPLDTDI------------AGDPDYGLAAQRSNIVYGSL 857
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh1b (protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]) HSP 1 Score: 259.225 bits (661), Expect = 3.955e-71 Identity = 231/791 (29.20%), Postives = 366/791 (46.27%), Query Frame = 1 Query: 106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKD-KSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNL--------DQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIE-------INETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 + L Y C S ++T+++ EE P + ++G++ + + + P+L++ K GD+ + ID ET+ + E C L+ + D I + + D+NDN P+F P + + EN +G + + A+D DA S N + Y + NL ++P LIV LD E + Y +++ D T + ++ L I + D NDN P F + Y+ E+ EN PVGQ ++ V+A D D ++ Y FH+ S N++ I NTG I+++ + + KF V A D A + A + I VKD NDN+P I + G + ++E P L +V+D D G NA V+C + R D+ Y L + DYE +E + EI D G+P + SL V V D+N+ AP F ++ E + G +L V A+D D A L YS + F I+P+TG+++ + +LDRE ER E ++ D G TV++ VLD NDN P F+ F++ EN+ S V G + D DK E +Q + + +N + F + +G IL+ DRE YT ++A D G P S++ TI V D+NDN P +VT S+ +T+ P + K+ A D D G N+ + YS+ N LF ++ GE+ +A+ G +L ++ SD G+P RH + IF+N Sbjct: 22 VLLLYSC-GSSLASITYQLREEQPPNTLVGSLAADQGLPDTGHLYKLEVGGPYLRVDGKTGDIYTTDVPIDRETLKDCRNLF-EGDPCFLEFEVSITDLMKGSGPRLIEGRIEIQDENDNTPQFPSPILELAIPENTYVGAHYSIPVAMDKDAGS-NGIADYKLNSGSDAMNLFSLQVADNTDEKVPQ--LIVLGNLDREQRDTYDLSIKVIDGGTPPRYSSALLRITITDTNDNVPKFERSHYEGEMAENTPVGQSVLQVKANDDDLGANGQVTYSFHQPSP-NVQRLLHIDHNTGIIQVKGSVDREEVPLLKFSVQARDNGPQA-KSSKAMVTITVKDRNDNAPSI-RIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVPFQLRSASASDSTSKRKYFLQTTTPLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPSLYEVDFAEENQPGDKVLDVVATDADSGTNAELLYSIITDSATKGLFDINPNTGEVRV-MNQLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMPPLSPV-GMVTVIDADKGEN-----AHVQLSVEPENGK-----FVIQNGTGTILSSISFDREKESTYTFRLKAVDGGDPPRSSYVGITINVLDENDNAP-YVTKPSNSSYKFLQPLTS---PDTRVEKVDAEDIDTGLNAELVYSITGGNPHGLFRISSTDGEITLAKEFTRKHNGLHRLVVKVSDKGKPSRHTTALVHIFVN 788
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 243.817 bits (621), Expect = 5.034e-66 Identity = 228/798 (28.57%), Postives = 363/798 (45.49%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVARL---LPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C Q + + I EE +++IGNI H++ + ++ + +P L+ +S+ G++ +S RID E +C + C E+E ++ +D I I + V D NDN P F P +++ EN I + A D D N V++Y F LD P LIV++ LD E K Y ++ D + ++ +T L++ V D NDN P F + + ++ I E+ PVG ++ ++A D D +I Y F R F + TG I +Q+ L + +K V A+D + + A A + I V D+NDN+P I N + ++E DP ++ + V+D D VN V C + + F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L + EN ++ + ++A+D D + + PN +F +D TG + + R DRE ER + D Q VI+ +LD+NDN P F F +SENL YS V G I TD D E + L D++N I +P +G I + DRE +YT ++RA D+G P S+ TI V D NDN P + P S+ V ++A PG ++ ++ A D D G N+ + Y+++N NNK LF ++ VTG + + G +L + SD G P H +F+++N Sbjct: 5 DFYLLATLVACLWLDPAIAQELIYPIREELQENVLIGNIPKDLNISHMNTATGASNNLVYRLVSKAGDNPLLRVMSNTGEIFTTSNRIDREKLCPGPSYEDSECSFEIEVVIL--------PNDYFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDM-GPNSVYKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREETANHKLSVLASDGSSSS---ARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVSLSILNDNEN-FILDPY-----TGVIKSNVSFDREQQSSYTFDVRAVDSGHPPCSSAAKVTINVIDVNDNPPIVIYP-PSNTSFKLVPLSA--IPGSVVAEVFAVDGDTGMNAELKYTIVNGNNKGLFRIDPVTGNITLEEKPTEADSGLHRLVVNISDLGYPKSLHTLVLVFLYVN 774
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 243.817 bits (621), Expect = 6.692e-66 Identity = 228/798 (28.57%), Postives = 363/798 (45.49%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVARL---LPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C Q + + I EE +++IGNI H++ + ++ + +P L+ +S+ G++ +S RID E +C + C E+E ++ +D I I + V D NDN P F P +++ EN I + A D D N V++Y F LD P LIV++ LD E K Y ++ D + ++ +T L++ V D NDN P F + + ++ I E+ PVG ++ ++A D D +I Y F R F + TG I +Q+ L + +K V A+D + + A A + I V D+NDN+P I N + ++E DP ++ + V+D D VN V C + + F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L + EN ++ + ++A+D D + + PN +F +D TG + + R DRE ER + D Q VI+ +LD+NDN P F F +SENL YS V G I TD D E + L D++N I +P +G I + DRE +YT ++RA D+G P S+ TI V D NDN P + P S+ V ++A PG ++ ++ A D D G N+ + Y+++N NNK LF ++ VTG + + G +L + SD G P H +F+++N Sbjct: 5 DFYLLATLVACLWLDPAIAQELIYPIREELQENVLIGNIPKDLNISHMNTATGASNNLVYRLVSKAGDNPLLRVMSNTGEIFTTSNRIDREKLCPGPSYEDSECSFEIEVVIL--------PNDYFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDM-GPNSVYKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREETANHKLSVLASDGSSSS---ARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVSLSILNDNEN-FILDPY-----TGVIKSNVSFDREQQSSYTFDVRAVDSGHPPCSSAAKVTINVIDVNDNPPIVIYP-PSNTSFKLVPLSA--IPGSVVAEVFAVDGDTGMNAELKYTIVNGNNKGLFRIDPVTGNITLEEKPTEADSGLHRLVVNISDLGYPKSLHTLVLVFLYVN 774
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 210.69 bits (535), Expect = 4.191e-56 Identity = 209/746 (28.02%), Postives = 341/746 (45.71%), Query Frame = 1 Query: 250 PFLKLSDK-GDLMLSSR-IDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY--IFKEPT--GTFNL------DQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGF-----HELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADK-----------MAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVG--NEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDR--DGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLF-IFIN 2367 P ++++ + G+L + R +D E +C + +E ++ ++ + + I + ++V D NDN P F P TV+V EN P G + A D D + AN V +Y + +P F L + ++P L+V+K LD E + Y L A D + L I+V D NDN P F Q E +EI EN PVG ++ + A D+D+ +++Y S + F + +N+G + + L+ + Y+ + A DK + I+++D+ + +S S + + P L T V+D DIG N V+C + + F+L + N+ Y L + + DYE + E +I+ D G+ S+ + + D N+ AP F + K+ + EN G +++ VSA+DR D +A + Y + F +DP TG I S +LDRE I+ D G TVI+ VLD NDN P F F ++EN+ +S V G + D D+ E N +V + T + Q +F + ESG I + DRE H Y +E++A D G P+ S+ I+V D NDN P + P S+ V T PG ++ ++ A D D N+ + Y ++ N LF ++ V G + + L G +L +R SD G +H+ +L +F+N Sbjct: 84 PLVRVNPRTGELFAAGRKMDREALCGGQD-PGDECHVDVQVGVLPV-QPGPFFKLIEVRINVEDINDNAPAFAAPVLTVSVPENAPAGKRFPIQPANDPD-SEANGVRRYELLPSDPATVSAFELSVTETANGEKVPY--LVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVIYISEASHVNL-----PVALIT--VSDPDIGANGAVTCYIYNPEV-PFQLKKLTYPNQ-YLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETG-IISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTV-GMVTVADSDEGE-NGRVRLSILGTDNRQ-------LFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTL---PGTIVTEVSAVDNDAEINAELRYHIVGGNPHNLFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIGIAVQHHAVALVHVFVN 802 HSP 2 Score: 60.8474 bits (146), Expect = 1.711e-9 Identity = 78/289 (26.99%), Postives = 122/289 (42.21%), Query Frame = 1 Query: 298 IDLET-ICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGT-----FNLDQSRLPSIGLIVKK-PLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSF----SQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNS 1122 +D ET I + E E + TI+AKD+ E + V+V D NDN P+F + V EN P + + D+D RV I GT F++D P G+I D E + Y ++A D + + +T + IHV+D NDN P S Y+ + P G + V A+D D+++ ++ Y + N N F I G+I L + L+ ++ V +D H AVA + + V + +N+ I L S Sbjct: 542 MDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLSIL----GTDNRQLFSID----PESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTLP-GTIVTEVSAVDNDAEINAELRY---HIVGGNPHNLFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIGIAVQHHAVALVHVFVNETLENATYIEWLIAGS 818
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 205.682 bits (522), Expect = 9.221e-55 Identity = 210/799 (26.28%), Postives = 357/799 (44.68%), Query Frame = 1 Query: 154 FKIMEESPIDMVIGN--------IVHLHPSFNKASYFIKSPFLKLSDK--GDLMLSSRIDLETICAQHEMCCEEVECI--LKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG------TFNLDQSRLPS------------IG----LIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQ-IEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFH-ELSDNNIRNTFIITENTGSIKLQ--KKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSP--KITSLSG----NSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRF------EKDFQ--KLKLLENREQGHNILQVSASDRDGSAVLKYSFT------GEP-NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-----ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIF----KVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLI-IKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARL---LPIGQFQLFLRASDNG 2322 +++ EE + VIG+ + P+ + + + +P L + ++ G+L ++ R+D E +C + C + ++ MAK + S +++ + V D ND+ P F P V+++E+E +G + L RA+D DA + N + Y +G F+L +S +G L +++ LD E Y L D K + L I V+D NDN P F + + I E+ VG ++ + A D D+ I Y FH +L+ + + TG + ++ +KL + ++ V A D ++ A + +++ D NDN+P ++ +L G + ++I E P + + V+D D+G + V +L ++ L + + L + R DYE ++ + D G+P+ +L + V DIN+ P F E D ++ L EN G +L + A+D D +FT GE + F+++ TGQ+ LDRE R E+++ D + + V + VLDENDN PTF+ +S N E +S G ++ +D D+ + N +V L R + P + T G + T+ LDRE Y + +RA D+G P LSA +I V D NDN P +P ++ H + SP G L+ + + A D D G+N Y ++ N K +F+LN +G L +AR L G +L +R D G Sbjct: 31 YEVDEEVLVGYVIGDLRQSNLLCVCFFPPAPHVSPLPLHTPSLCIVNELSGELSVALRLDREALCMEEPDACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGT-NSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLS-RSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRL--EFPTGAELASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATP-LDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGD-NARVALNLV--------REAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSPNTNDTWKH---VRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRG 812 HSP 2 Score: 91.2781 bits (225), Expect = 7.422e-19 Identity = 138/603 (22.89%), Postives = 244/603 (40.46%), Query Frame = 1 Query: 718 NTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR-NTFIITENT-------------------GSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSP----------KITSLS--GNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQL---LQQYINDFRLDAVGNE-IYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQK--------LKLLENREQGHNILQVSASDRD----GSAVLKYSFTGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFID---ISG---VFNIS--ENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPI------GQFQLFLRASDNGRP 2328 N + L++ +L D ND+ P+F + I E+ VG+++ AID D+ + Y S + ++ F + E+ ++L+++L + Y+ ++ D +V + I V D NDN+P +IT S G S +++ DP D G N ++ L L G + ++ + D E + + D G A ++ V + D N+ AP FE + +K++EN G ++ +S SD D G+ ++ F P P+ Q + R LD E ++ ++++ D PK + +II V+D NDN P F++ I G V+ +S EN + + V + ATD D N + F L ++ ++E +G++ LDRE Y + + A D G P A + V D+NDN P +V +S ++ + + G + + +D D G+N+ V +++ +I V R L + Q++L +RA D+GRP Sbjct: 124 NLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNPKLSGSVL-LTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADP------------DAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEF---PTGAELASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADR-GTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVL-NLLATDADSGP-NGAITFTLSELAGGES--VAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRP 705
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 202.601 bits (514), Expect = 6.737e-53 Identity = 185/639 (28.95%), Postives = 295/639 (46.17%), Query Frame = 1 Query: 412 NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG--TFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQ--CNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKL--SAKVRQ----KYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND------FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG--SAVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKD-EINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHN-YTVEIRAFDTGLPM---LSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTG 2253 ++ V V D N++ P F + V++AE+EP+ + RA D D+ V +Y E G F + P L V+ LD E + +Y T+ A DT + ++ + + VLD NDN P F+ Y E VG + AV+A D D+ + Y F + N F + TG I + A +RQ + F V A D + A + + V+D+NDN P+ + + + ++ +L + +D D GVN L+ IN+ F +DA +I L S+ D E + D G+ A ++ V V D N+ PRF + + LE+ G ++ ++ASD D S ++Y+ G + F ID TG + RRLD E +N+ D P++ +++ V D NDNPP F+ +I EN+ ++V I T +D D ++N ++ + + F +P ESGEI T ++DRE+ + V +RA D +P+ SA KN T+ V D+NDN P +VTP + I + A + G ++ LQA+DPD EN+ V Y+V + +LF L++ TG Sbjct: 743 SVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEV-KYEIGEGNGGEKFGI----FPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVN-----FELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNL-TQLLRVTASDVDEGVNG-----ALRYAINEGNEGGKFTVDASTGQITLLGSL---DREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLA-RRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRV---ITVTARDPDADVNGELHYSIARQFPPGAHFTIDP-----ESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTA----ILVDGLRAAA--GSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTG 1347 HSP 2 Score: 172.17 bits (435), Expect = 2.022e-43 Identity = 168/619 (27.14%), Postives = 276/619 (44.59%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILEN-FPVGQQ----IIAVEAIDKDSDLFNKIIYGFHELSDNNIRN-TFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYD---HGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGE----------PNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDW-VTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTY 2202 + +SV D NDN P F P+ + V EN G ++ A DAD V + G F +D + S L + LD E ++ Y T+ A D + + L + V D NDN P FS+ Y ++ E+ P G+ I V A D DS F ++ Y D++ + F + TG++ + + L + R Y + A D +A A A +++ V D NDN+P + + S E+ E PP L + TDDD GVNA + + + R AVGN+ LS R+ D E + + D H R + +++ + D+N+ AP F L E+ G + V A D D + ++Y+ + F ++ TG+++ +R LDRE + + ++ D P T T+ + V D NDN P F I+E+ ++V R++A D D+ N ++ + + + + R+ +P+ G + + LDRE +Y + +RA D G P S + + + D ND P + ++P + H +T PP LI+++ A D D G + VTY Sbjct: 1502 VEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEGAFVVDAA---SGVLRASRRLDREERASYLLTVRASDGTHATDAR-LSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGGLA---ATARLYVNVLDANDNAPSVQNDS--LAAEVPEDAPPGTSLLRISATDDDEGVNAELEFS-ISSGDPEGRF-AVGND-GQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALA-PEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRL-VRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVL-RLSAWDPDEGA-NGELRYDIASGDPTGDFRL-DPVL-----GTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTVHARENT-----QGPP-VLILQVVARDDDLGSSGQVTY 2092 HSP 3 Score: 170.244 bits (430), Expect = 7.920e-43 Identity = 181/683 (26.50%), Postives = 299/683 (43.78%), Query Frame = 1 Query: 367 TIMAKD--KSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADAT-SANRVHQYIFKEPTGTFNLDQSRLPSIGLIVK-KPLDYEVKSQYFATLEACDTNKQCNTQ--ALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---------PIGQFQLFLRASDNGRP-PRHNETSLFIFI 2364 TI+A D K +S + ++ V V+D ND+ P+F ++E P G Y+ A+DAD+ +A + + G F++D+S GL+ +D EV S + A D Q T +L + +LD ND P F+Q +Y +EN G +++V A D D + Y F R F + TG + K L + ++Y V A D+ + + A + + V DLNDN P + + I NE + T+ TD D G N V QL F+++AV + S+ S D E + ++ D G R + + + V D + P F +D + EN G + VSAS D +A + Y +G+ F+I+ G+I + +DRE ++ ++ A G+ +V + V D N++ P F S +I+E+ S+ + ATDKD + N +V +++ + F + G++ +LDRE Y++ + A DTG+ LS+ + V D NDN P + + + + G L+ +QATD D G N VTYS ++ F L+ TG + R+ F + A+D GRP P + ++ +F+ Sbjct: 309 TILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDES----TGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPL-GSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPG-GTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAV---STRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSGDQRGSFSIEWSGGRIFTA-NAIDREEQAFYQLRVV---ANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFS-VRATDKDSGK-NGEVKYEIGEGNGGEK-------FGIFPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLF------NSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYS-FEKPQVNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFV 962 HSP 4 Score: 169.859 bits (429), Expect = 1.014e-42 Identity = 168/662 (25.38%), Postives = 296/662 (44.71%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYE------NEREIKAEIECYDHGSPRNVAHKS-LNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN--NKLLFILNQVTGELRVA----RLLPIGQFQLFLRASDNGRPPRHNETSL 2352 + ++V+D D P F + + V EN G + A D +AN + + + G+F+++ S + +D E + ++ ++ ++ + V D N++ P F + Y++ I E+ PV + +V A DKDS ++ Y E+ + N F I + G + ++ +L + R++Y V A D +V + + V D+NDN P S S E + + +Q TD D G N V+ + +N F LD +E ++S+R FD E + D G P+ + ++ + V V+D+N+ P+F K + + E+ +L+V+ASD D L+Y+ G FT+D TGQI + + LDRE + + TD+ +P CTV ++VLDENDNPP F + + E+ + ++ + A+D+D + +++ + N + I + T G + ++LD E Y + + A D G P S+ ++V D NDN P ++ G +I N P G +I + A DPD N + YS+ F ++ +GE+ A R + G F++ +RA+D P ++L Sbjct: 644 VTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLD-LNANVTYLIVSGDQRGSFSIEWS---GGRIFTANAIDRE-EQAFYQLRVVANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKY---EIGEGNGGEKFGIFPD-GQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSV-TVNVTVLDVNDNKPLFNSSSYVFHF-CEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVN-FELD---SETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQI-TLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALES-TRVGELLITLTASDEDTGPSGD-----VRYAIVAGNTHATFAIDRST--GSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLP------GDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSAL 1275 HSP 5 Score: 168.318 bits (425), Expect = 3.074e-42 Identity = 180/640 (28.12%), Postives = 277/640 (43.28%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPK-QTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKK---------PLDYEVKSQYFATLEACDTNKQCNTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL---SGNSKIEINETDPPRELFTL-QVTD-DDIGVNANVSCQLL-QQYINDFRLDAVGNEIYSLSSIRS-FDYENEREIKAEIECYDHGSP-RNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISEN-LSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGEL 2259 + V V D NDN P F +P V E+ +G + LD A+D D N V+ + +K +G ++ RL + K+ PLD E Y ++A D L+++V D NDN P+F + Y+ + E+ PVG + DL ++ G L+ TG + ++ L + R++Y + AAD A I++ D+NDN P I + ++E+ P + L VTD D N +S ++ F L A G + + S D E I D+G P A SL V+V D+N+ APRF L E G + V+A D D A L+YS +G +F++D TG + + ++DRE+ + +NI D PKT ++ + +LD ND PP F V EN L V ++A D D E N V + +Q R +F++ + +G++ T+K LDRE Y + ++A D G P L + T+ V D NDN P + P+ + +I N P G + + ATDPD G N V Y + + F +N VTG + Sbjct: 9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRD-VGPNGVNHHAYKIVSGN---EEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAAL---------RDLLHR---GRGPLA-------VPFDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPL-SGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTD-GKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVV--SVSAADSDLGE-NGTVRYNFDPDMPAQYRE----MFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFY-PVQ-----YFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAV 610 HSP 6 Score: 166.392 bits (420), Expect = 1.077e-41 Identity = 178/691 (25.76%), Postives = 308/691 (44.57%), Query Frame = 1 Query: 370 IMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEA--IDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSL--SSIRSFDYENEREIKAE----IECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSA--VLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVER------IEINIIVTDAIE-NPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYS-VMNNNKLLFILNQVTGELRVARLLPIGQFQLF---LRASDNGRPPRHNETSLFIFI 2364 + A+D+ S + + V V D NDN P F + ++ ENEP G + A D D + V + F ++ + + + LD E ++ Y + A D + + + I V D D P+F++ +Y + EN G + +V A +D ++++ I+ G + R +F I + G I + + + Y+ +V A + +A A++ + V D+N+++P S ++ I E +P F+++ TD D G N V ++ + G E + + YE +RE + E + D G + ++NV V D+N+ P F E +E G + V A+D D + + YSF +P F +D TG+I S +R DRE + R +++ TD P + TV + V D NDNPP F ++SE+ S+ +++ R+ A+D D+ +N + + + + F V S G+I + LDRE +YT+ + A D+G L+A + V D+NDN P + L S + + + G L+I L A+D D G + +V Y+ V N F +++ TG + +AR L +L+ + A D GRPPR + T L + + Sbjct: 524 VQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAV---TGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSG-------DQRGSFSIEWSGGRIFTANAIDREEQAFYQLRVVA-NSGGVAGE---ASVSVLVHDVNNHAPVFDRAS--YEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGN---------GGEKFGIFPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFE-KPQVNFELDSETGRIAS-LRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLL-RVTASDVDEG-VNGALRYAINEGNEGGK-------FTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRV------GELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHV 1172 HSP 7 Score: 157.532 bits (397), Expect = 5.835e-39 Identity = 155/567 (27.34%), Postives = 249/567 (43.92%), Query Frame = 1 Query: 730 LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-----RELF-TLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNE--IYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPK---TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ--HTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLL-FILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFIN 2367 +EI V D NDN P F+ E ++E+ EN G+ I + A D D + Y S+ F++ +G ++ ++L + R Y V A+D H A + + V+D NDNSP+ + + ++ E P R + T+ D D G V+ L +D+ A G +L+ R D E+ D G A L V+V D N+ AP + D ++ E+ G ++L++SA+D D A L++S + G+P F + + GQ+ S R LDRE + + V+D +P + V + + D NDN P F S ++ S V + A D D N+ V + L F + T +GE+ V++LDRE +Y + + A D G P L++ + V D NDN P + P + I + PPG +++L A DPD G N + Y + + + F L+ V G L VAR L ++L +RA D G P R + S+ + ++ Sbjct: 1502 VEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEG----AFVVDAASGVLRASRRLDREERASYLLTVRASDGT----HATDARLSVAVRDANDNSPRFSRHA--YSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGG--LAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVG-NDGQL-SVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFT--SPRSALAPEDSPVGAVVATVQAVDPDSGR-NSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRF--PRRE----YEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLS 2045 HSP 8 Score: 131.724 bits (330), Expect = 4.590e-31 Identity = 165/645 (25.58%), Postives = 269/645 (41.71%), Query Frame = 1 Query: 367 TIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACD-TNKQCNTQALE-IHVLDQNDNYPS-----FSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELS----DNNIRNTFII-TENTGSIKLQKKLSAKVRQK---YKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVT--DDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGE-PNDY---FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK 2223 + A+D S + + ++V+V D NDN P F KP +VAE+ P+G L + +H+ G L P G++ ++PLD+E + QY +L A D N + +A I +LD NDN P+ + E+ G V D DS N ELS N R F++ +++ K S R++ Y + A+D A A++ + V D+ND++P+ ++ P + VT D D G+NA + ++ ND +V +++ D E + I D G+ A+ SL V + D+N+ P F + +EN G ++ VSA+D D + ++Y+F + P Y F +D TG++ + ++ LDRE +E + + D P V + V D NDN P F + +I EN + ATD D+ N V +QL T R F+V +G + T LDRE Y +++ A D G + TI V D D P + ++ + N PG L+ + A+ D N+NVTY +++ ++ Sbjct: 105 AVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALR------------DLLHR-------GRGPLAVPFDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANG------ELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFAL---SAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSG--NDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTT-LKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILEN-EPGGTAVTTVTATDPDRGA-NGTVRYQL--TAGDAAR------FQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFAR------DDYSFVVFENVAPGTLVGSVSASTLDL--NANVTYLIVSGDQ 700 HSP 9 Score: 131.339 bits (329), Expect = 6.839e-31 Identity = 151/611 (24.71%), Postives = 244/611 (39.93%), Query Frame = 1 Query: 253 FLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEP---------IGFYLYLDRALDADATSANRVHQYIFKE-----PTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKM--AMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLL----------QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSA--VLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFD 1995 F+ + G L S R+D E E +L T+ A D + + + V+V D NDN P+F + + +VAE+ IG L A DAD+ V + G F L P G + V +PLD E ++ Y A D T L ++VLD NDN PS E+ E+ P G ++ + A D D + ++ + +S + F + N G + + + L + + Y V +D+ A + + + + D+NDN+P TS S + ++ + T+Q D D G N+ V L F L+ V E+ +R D E + + D G P + +L V V D N+ APRF + + + E+ G +L++SA D D A L+Y +G+P F +DP G + R LDRE E+ + D ++ +V + + D ND P F + EN + ++ A D D + +V + D F V+ G + ++ LDRE + + I A D Sbjct: 1563 FVVDAASGVLRASRRLDRE----------ERASYLL--TVRASDGT--HATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVL----AGDADSGPFGEVTYALAPSEDSDWADGAFGLH----PVTGALNVTRPLDRESRACYVLRARATDGGGLAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEF---SISSGDPEGRFAVG-NDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSP--RSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEV---RLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVA-RPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTVHARENTQGPPVLILQVVARDDDLGS-SGQVTYAAAGGNDGGA-------FSVSPDGHVHLLRSLDREAQPQHVLIITATD 2133 HSP 10 Score: 113.62 bits (283), Expect = 1.509e-25 Identity = 172/686 (25.07%), Postives = 282/686 (41.11%), Query Frame = 1 Query: 388 SSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQA--LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQK-YKFKVFAADKMAMAFH---KAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLL-QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRN-VAHKSLNVHVKDINEFAPRFEKDFQK-LKLLENREQGHNILQVSA---------SDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIEN--------PKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPG-----YLIIKLQATDPDYGENSNVTYSVMNNNKL-----LFILNQVTGELRVARLL---PIGQFQLFLRASDNG 2322 +S + S + V V D+NDN P+F + +V+ E+ +G L A D D + V I T TF +D+S + + + + LD+E + Y + A D + + A L +HV D NDN P+F + I+EN P+G ++I V A D D+D+ ++ Y F I +G I ++ +V ++ V A DK A+ H A+ N+ + V D NDN+P+ + + ++ + TLQ +D D NA V + FRLD I + + + ++ +PR A ++ + N PRF +D++ + LL QG I S+ + +G V G + I+P + R M I + +++ +N P + V I V D NDNPP F + EN + +V ++ATD D+ + N V + + SE F V SG + ++LDRE +Y + +RA D + ++ V D NDN P + S H ++ ++ ++ P +I + A D D G VTY++ + F L+ VTG L V R L + L RA+D G Sbjct: 1054 TSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRS---TGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAH--FTIDPESGEICTAAEIDREVTGGLFEVTVRATDK-AIPVHTRRSALKNVTVLVTDENDNAPRFVTPTA-ILVDGLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTGIIETSTELDRESGHGAFTLEVVAVEAKAAAPRTQRAENTIIANSMTFNHPLPRFPQDYESPINLL----QGQTIPMPSSYLFLRHHLDWEPEGQLVFFTLLLGVTRGHGVINPLDAPWRVSFDLTARCMF--IVFSSLLSSLRDNGAGSFIRPPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEEN-TGEGEVIFTLSATDADQGQ-NALVTYSVLSG--------SEGAFVVDAASGVLRASRRLDREERASYLLTVRASDG---THATDARLSVAVRDANDNSPRF----SRHA--YSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGG 1707 HSP 11 Score: 83.9593 bits (206), Expect = 1.907e-16 Identity = 106/452 (23.45%), Postives = 182/452 (40.27%), Query Frame = 1 Query: 1057 IFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNA-NVSCQLLQQYINDFRL----DAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPT----FIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPML-SAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTG----ELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFI 2364 + + V D+NDN+P G ++ E R++ D D+G N N + + RL L++ D E ++ D GSPR +NV V+D N+ P FEK + + E+ G + + R AV DP TG + S + LD E + +++ D P +G+ T +I++LD NDN P ++ + + ++ V + TD D N ++ + + + + P V + +LDRE Y + I A D G P+ SA + +YV D ND+ P + + ++ +P G + + A D D G N+ + YS+++ N L F +++ TG + +V R + L + A D G P+ TSL + + Sbjct: 9 VRVVVGDVNDNAPSFPE-PGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALRDLLHRGRGPLAV-------------PFDPKTGMV-STRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAP--GVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAA------ALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREV-ASSVVLNISAQDQGAQPKTAYTSLTVTL 436 HSP 12 Score: 70.4774 bits (171), Expect = 2.228e-12 Identity = 87/354 (24.58%), Postives = 148/354 (41.81%), Query Frame = 1 Query: 1381 LNVHVKDINEFAPRF-EKDFQKLKLLENREQGHNILQVSASDRD----GSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRR-----LDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPD----WVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDY-GENSNVTYSVMNNN-KLLFILNQ--VTGELRVARLLP------IGQFQLFLRASDNGRP-PRHNETSLFIFIN 2367 + V V D+N+ AP F E ++ E+ G +L +A DRD G Y + + P ++ + LDRE + + D + G+ V + V D NDNPP F + +++E+ + +R ++ ++ L FD + +G + T + LD E YT+ +RA D G P LS I + D NDNDP ++ P + + ++ ++ PG + + TD D N ++ S++ N + F+L+ V G LRV ++ I + L + ASDNG+P R SL +++N Sbjct: 9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALR-----------DLLHRGRGPLAVPFDPK-------------TGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAA-----RSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPG-LRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVN 332
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 171.014 bits (432), Expect = 4.541e-43 Identity = 176/686 (25.66%), Postives = 286/686 (41.69%), Query Frame = 1 Query: 355 ILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHV-LDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKL--------DREINHN-YTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTG--ELRVARLLPIGQ-FQLFLRASDNGRPPRHNETSLFIFI 2364 +L+ T + + S S + V+V+D ND+ P+F+ + P G ++ A DADA + + + F++D R G+I + T+ D + + V +P F+ E+ P G I V A + S + Y H S N+ + F + +G + + + L + + Y+ V A D F A + + V D+NDN+P+ +S +K+ E PPR + L D D G+N V ++ I N FR++ EI S+S++ D EN + ++ D GSP + + V D N+ +PRF + F + E+ G +L+VS D D A + +S +P+ F+I P TG+I RRL+RE + + +D T V I V D NDN P F + E + V R++A+D D D N +V F ++ ++N R+ +SGEI +V+ L N N Y+ + A D G P LS+ TI + N N P ++ ++ + A G I+ + A DPD N + YSV+ N G LR + G F + + A D GRPP + + I + Sbjct: 96 VLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRR----GVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAA--RSSRRAGPVSY--HLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPF-SAYLKLEVDVLDINDNAPEFSSSRFWAKVP--ENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTL---DRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-HVREDAAVGFPVLRVSTLDADEGPNAAITFSLL-DPSLPFSIHPSTGEITVS-RRLNREDRSGYAVKVRASDPAWTVST---DVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALV-ARVSASDAD-DGANGQVFFFMRS--QTENFRVGR------DSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRER------YSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISV 745 HSP 2 Score: 171.014 bits (432), Expect = 4.580e-43 Identity = 182/674 (27.00%), Postives = 290/674 (43.03%), Query Frame = 1 Query: 355 ILKTTIMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQ--ALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLL-QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIE--CYDHGSPR--NVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLK-YSF---TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILN--QVTGELRVARLLPIGQFQLFLRASDNGRPP 2331 I T+ A+D+ S +SV+++N P+F P +++ EN P G L A D DA N Y G+ D SR L+V + LDYE + Y ++ A D Q T+ + I V D NDN P + +Y I EN P G ++ ++A+D DS +Y D+ + F++ + TG + Q L + +Q Y+ V A + FH + A + +++ +N+ P+ N ++E+ P + ++ TD D G++ V L + F ++ EI I S + ERE A + + GS R +V +NV + D N+ P F ++ E G +++ VSA D D + +SF +G F+I+ HTG I LDRE V + ++ D E P TG V++ + D NDN P + S ++EN + V + A D D FQL + D R F ++ SG + T + +DRE + + + D G P L++ + V DQNDN P + H VN + PG I ++ DPD + N + N F N ++ + R A G+F+L +R SD P Sbjct: 720 IFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDA-GVNGAIVYSIASGDGSGLFDISRASGDVLLVGE-LDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSL----DDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFN-YPDTFHYSTAQVHVQITGVNEYFPRFVQREYN--FVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEI-----IVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVA-SPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSA--KVTENQPAGMTVL-NLEAGDPDLPPNKGPYTFQLLGS-DPAWRG----YFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN-PSEARDVRVH-----VNYFGSPFPGGFIGDVRPRDPDISDRFNCDLTSGPFNVFSFQPNTCRLISQPRSAE----GRFELSVRGSDGKHSP 1359 HSP 3 Score: 162.54 bits (410), Expect = 1.674e-40 Identity = 183/673 (27.19%), Postives = 281/673 (41.75%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIG-LIVKKPLDYEVKSQYFATLEACD---TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-IND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT--VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL----PIG--------QFQLFLRASDNGRPPRHNETSLFIFI 2364 + V V D+NDN P+F + V E+ PIG + L A DADA N + Y + G F+++ PS G +I LD E + Y + A D T ++ L + V D ND+ P F Y + P G + AV A D D+ + + + F + G I + L R V +D A AV + ++ +D + P+ G E PP T+ V VS L + D F +D E+ S R+ D+E + + +E D G P A+ L V V DIN+ AP F K+ EN I+ ++A D+D + YS G + F ++P++G+I+S + LDRE V E+ + TD T CT V+I V DENDN P F I ++ E+ + V R++ D D+ N + F L S P +GEI ++L+RE Y V++RA D P + + TI V+D NDN P + + + S L+ ++ A+D D G N V + M + F + + +GE+ R L P G ++ + A D GRPP ++ ++ I I Sbjct: 12 VTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADA-GLNAIISYRLRGGDGHFSVN----PSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSL----SGSASAGFSVDPRRGVIHAARALQGP-RDDLTLTVRVSDGGAPP-RSAVTTVTVRFRDAGE-FPRFA--PGPRSFSFREDQPPGTTITV-VAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEV---SVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPP-RTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRS-VSTLDRENVASYELTVKATD--RGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-HVREDAAVGFPVL-RVSTLDADEGP-NAAITFSLLDP--------SLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQT------AYYIEFPEPSEGEALVARVSASDADDGANGQVFF-FMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINI 641 HSP 4 Score: 162.54 bits (410), Expect = 2.019e-40 Identity = 139/525 (26.48%), Postives = 233/525 (44.38%), Query Frame = 1 Query: 718 NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPR--ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSA--SDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL 2277 T + + V D+NDN P F E + + E+ P+G + V A D D+ L N II D + F + +TG I L + R+ Y +V A D + A + + V D+ND++P+ + + + P +F + D D G N ++ L F +D I++ +++ ++ + D G+P A ++ V +D EF PRF + E++ G I V+A S R G + G D F +DP +G++ S R LD E E+ + D+ P + + ++VLD NDN P F + EN + V + A DKD IN +V + + + I +F+V SGEI +V LDRE +Y + ++A D G P I V D+NDN P + S+H + ++ G+ ++++ D D G N+ +T+S+++ + L F ++ TGE+ V+R L Sbjct: 8 GTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGL-NAIISYRLRGGDGH----FSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAP---YVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQG----PRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEV-SVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV--LTAVDKDSG-INGQVDYSII------DGNIGN-VFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAH-------VREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPS-LPFSIHPSTGEITVSRRL 500 HSP 5 Score: 127.102 bits (318), Expect = 1.207e-29 Identity = 179/729 (24.55%), Postives = 305/729 (41.84%), Query Frame = 1 Query: 178 IDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSS-DQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIA-VEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKL---------SAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI-----------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKK-LDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLL-FILNQVTGELRVARLL 2277 ID IGN+ ++P + G++ S +D E + A +E+ T+ A D+ S Q ++ + +SV+D+NDN P+F + + +V E+ +GF + LDAD N + +P+ F++ PS G I V + L+ E +S Y + A D +T + I V D NDN P F Q Y IE E G+ ++A V A D D ++ + ++N F + ++G I + L S KY F V A D+ + A + I + N N+P+ T +G ++++ DP R++ Q+ +G NA+ F +DA G L S + +E D G P + + + V + N++APRF +L L EN G ++ +V+A+D D + YS +G+ + F I +G + + LD E + +++ D KT V I V D NDNPP ++ S + I EN S + V + D D +N V ++ D +F + + +LT + LD E Y + +RAF+ + + + N+ P +V + ++ ++P G + + ATD D G + V Y + ++ F +N+ TGE+ V+ L Sbjct: 375 IDGNIGNVFRVNP-----------------NSGEIRSVSTLDRENV-ASYEL-----------TVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQ-IFSAHVREDAAVGFPVLRVSTLDAD-EGPNAAITFSLLDPSLPFSIH----PSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTD-VTIVVDDVNDNAPRFGQTAYYIEFPEPSE-GEALVARVSASDADDGANGQVFFFMRSQTEN-----FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPL-SSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDV-NGQIAYSVVGGNAS----------RRFDVDAGG----FLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLL-VGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPP-MLNASDYYPVIPENAPSGTTV---LVMDAVDADSPSNAVTM---YSLDDGE----ADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQRE------YNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQL 1027 HSP 6 Score: 114.39 bits (285), Expect = 1.079e-25 Identity = 107/449 (23.83%), Postives = 198/449 (44.10%), Query Frame = 1 Query: 1045 AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHG-SPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFI 2364 + + V+D NDN P+ + + + E P ++ + TD D G+NA +S +L + F ++ +I + +S+ D E E+ D G +P + +L V V D+N+ PRF + G + V+A D D L++S +G + F++DP G I + R + + + + + V+D P++ TV + D + P F F+ E+ + + A + + ++ + L + + +F V +SGE+ + LD E H+Y + + A D+G P SA+ + V D NDN P++ + + N+PP +++ L A D D G N V YS+++ N +F +N +GE+R L + ++L ++A+D G P +H + I + Sbjct: 8 GTGTVTVLVEDENDNLPRFGA--AELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL-RGGDGHFSVNPSTGQIITTASL---DREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAA--RALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFP-RFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVS----YHLASGGNLGD------VFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSS------SRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISV 430 HSP 7 Score: 102.449 bits (254), Expect = 4.103e-22 Identity = 122/510 (23.92%), Postives = 209/510 (40.98%), Query Frame = 1 Query: 271 KGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTNKQCNTQALEIHV--LDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNAN--------VSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD---GSAVLKYSFTG-EP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDI 1743 GD++L +D ET E + ++ A D ++E + +SV+D NDN P + EN P G + + A+DAD+ S N V Y + F L+Q G++ + LDYE K Y T+ A + + ++HV N+ +P F Q+EY + E+ PVG + +V A D+D+ + + F+ L + F + E+TG I + +L + +V A + ++ V + + V + N P + S S ++E V +GV+A+ + L Q N R ++ + D E+ + D G P + V ++D+N+ P K+ EN+ G +L + A D D + G +P YF++ +G +K+ R +DRE + + + DA P T T+ + VLD+NDNP D+ Sbjct: 809 SGDVLLVGELDYET------------EKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPS-NAVTMYSLDDGEADLFVLNQK----TGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTV---FYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFD-VDEVLVNVAITDANDPPVFS-SALYHGRVSE--------AASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLT--SSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLS-SSGLLKTA-RPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSEARDV 1284 HSP 8 Score: 80.1073 bits (196), Expect = 2.911e-15 Identity = 81/336 (24.11%), Postives = 142/336 (42.26%), Query Frame = 1 Query: 1351 GSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPK-TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDE-INNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL--LFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPP 2331 G PR ++ V V+D N+ PRF + + E+ G ++ V+A+D D A++ Y G + +F+++P TGQI + LDRE E + + D P + T+++ V D ND+ P F++ V + + + V A T +D D N + F L + + F V ++ + + + T+ +R D G P SA T+ D + P + G + + + PPG I + A V+Y + + L +F ++ +GE+ V R L ++L + A D+G PP Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGG-DGHFSVNPSTGQIIT-TASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAV---FAVTARDADAGPNGDLRFSLSGSASAG--------FSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAP------GPRSFSFREDQPPGTTITVVAARSSR--RAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPP 315
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 171.014 bits (432), Expect = 5.015e-43 Identity = 176/686 (25.66%), Postives = 286/686 (41.69%), Query Frame = 1 Query: 355 ILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHV-LDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKL--------DREINHN-YTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTG--ELRVARLLPIGQ-FQLFLRASDNGRPPRHNETSLFIFI 2364 +L+ T + + S S + V+V+D ND+ P+F+ + P G ++ A DADA + + + F++D R G+I + T+ D + + V +P F+ E+ P G I V A + S + Y H S N+ + F + +G + + + L + + Y+ V A D F A + + V D+NDN+P+ +S +K+ E PPR + L D D G+N V ++ I N FR++ EI S+S++ D EN + ++ D GSP + + V D N+ +PRF + F + E+ G +L+VS D D A + +S +P+ F+I P TG+I RRL+RE + + +D T V I V D NDN P F + E + V R++A+D D D N +V F ++ ++N R+ +SGEI +V+ L N N Y+ + A D G P LS+ TI + N N P ++ ++ + A G I+ + A DPD N + YSV+ N G LR + G F + + A D GRPP + + I + Sbjct: 96 VLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRR----GVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAA--RSSRRAGPVSY--HLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPF-SAYLKLEVDVLDINDNAPEFSSSRFWAKVP--ENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTL---DRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-HVREDAAVGFPVLRVSTLDADEGPNAAITFSLL-DPSLPFSIHPSTGEITVS-RRLNREDRSGYAVKVRASDPAWTVST---DVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALV-ARVSASDAD-DGANGQVFFFMRS--QTENFRVGR------DSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRER------YSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISV 745 HSP 2 Score: 170.629 bits (431), Expect = 5.461e-43 Identity = 182/674 (27.00%), Postives = 290/674 (43.03%), Query Frame = 1 Query: 355 ILKTTIMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQ--ALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLL-QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIE--CYDHGSPR--NVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLK-YSF---TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILN--QVTGELRVARLLPIGQFQLFLRASDNGRPP 2331 I T+ A+D+ S +SV+++N P+F P +++ EN P G L A D DA N Y G+ D SR L+V + LDYE + Y ++ A D Q T+ + I V D NDN P + +Y I EN P G ++ ++A+D DS +Y D+ + F++ + TG + Q L + +Q Y+ V A + FH + A + +++ +N+ P+ N ++E+ P + ++ TD D G++ V L + F ++ EI I S + ERE A + + GS R +V +NV + D N+ P F ++ E G +++ VSA D D + +SF +G F+I+ HTG I LDRE V + ++ D E P TG V++ + D NDN P + S ++EN + V + A D D FQL + D R F ++ SG + T + +DRE + + + D G P L++ + V DQNDN P + H VN + PG I ++ DPD + N + N F N ++ + R A G+F+L +R SD P Sbjct: 720 IFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDA-GVNGAIVYSIASGDGSGLFDISRASGDVLLVGE-LDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSL----DDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFN-YPDTFHYSTAQVHVQITGVNEYFPRFVQREYN--FVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEI-----IVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVA-SPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSA--KVTENQPAGMTVL-NLEAGDPDLPPNKGPYTFQLLGS-DPAWRG----YFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN-PSEARDVRVH-----VNYFGSPFPGGFIGDVRPRDPDISDRFNCDLTSGPFNVFSFQPNTCRLISQPRSAE----GRFELSVRGSDGKHSP 1359 HSP 3 Score: 162.54 bits (410), Expect = 1.897e-40 Identity = 183/673 (27.19%), Postives = 281/673 (41.75%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIG-LIVKKPLDYEVKSQYFATLEACD---TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-IND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT--VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL----PIG--------QFQLFLRASDNGRPPRHNETSLFIFI 2364 + V V D+NDN P+F + V E+ PIG + L A DADA N + Y + G F+++ PS G +I LD E + Y + A D T ++ L + V D ND+ P F Y + P G + AV A D D+ + + + F + G I + L R V +D A AV + ++ +D + P+ G E PP T+ V VS L + D F +D E+ S R+ D+E + + +E D G P A+ L V V DIN+ AP F K+ EN I+ ++A D+D + YS G + F ++P++G+I+S + LDRE V E+ + TD T CT V+I V DENDN P F I ++ E+ + V R++ D D+ N + F L S P +GEI ++L+RE Y V++RA D P + + TI V+D NDN P + + + S L+ ++ A+D D G N V + M + F + + +GE+ R L P G ++ + A D GRPP ++ ++ I I Sbjct: 12 VTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADA-GLNAIISYRLRGGDGHFSVN----PSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSL----SGSASAGFSVDPRRGVIHAARALQGP-RDDLTLTVRVSDGGAPP-RSAVTTVTVRFRDAGE-FPRFA--PGPRSFSFREDQPPGTTITV-VAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEV---SVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPP-RTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRS-VSTLDRENVASYELTVKATD--RGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-HVREDAAVGFPVL-RVSTLDADEGP-NAAITFSLLDP--------SLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQT------AYYIEFPEPSEGEALVARVSASDADDGANGQVFF-FMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINI 641 HSP 4 Score: 162.155 bits (409), Expect = 2.327e-40 Identity = 139/525 (26.48%), Postives = 233/525 (44.38%), Query Frame = 1 Query: 718 NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPR--ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSA--SDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL 2277 T + + V D+NDN P F E + + E+ P+G + V A D D+ L N II D + F + +TG I L + R+ Y +V A D + A + + V D+ND++P+ + + + P +F + D D G N ++ L F +D I++ +++ ++ + D G+P A ++ V +D EF PRF + E++ G I V+A S R G + G D F +DP +G++ S R LD E E+ + D+ P + + ++VLD NDN P F + EN + V + A DKD IN +V + + + I +F+V SGEI +V LDRE +Y + ++A D G P I V D+NDN P + S+H + ++ G+ ++++ D D G N+ +T+S+++ + L F ++ TGE+ V+R L Sbjct: 8 GTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGL-NAIISYRLRGGDGH----FSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAP---YVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQG----PRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEV-SVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV--LTAVDKDSG-INGQVDYSII------DGNIGN-VFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAH-------VREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPS-LPFSIHPSTGEITVSRRL 500 HSP 5 Score: 126.716 bits (317), Expect = 1.540e-29 Identity = 179/729 (24.55%), Postives = 305/729 (41.84%), Query Frame = 1 Query: 178 IDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSS-DQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIA-VEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKL---------SAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI-----------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKK-LDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLL-FILNQVTGELRVARLL 2277 ID IGN+ ++P + G++ S +D E + A +E+ T+ A D+ S Q ++ + +SV+D+NDN P+F + + +V E+ +GF + LDAD N + +P+ F++ PS G I V + L+ E +S Y + A D +T + I V D NDN P F Q Y IE E G+ ++A V A D D ++ + ++N F + ++G I + L S KY F V A D+ + A + I + N N+P+ T +G ++++ DP R++ Q+ +G NA+ F +DA G L S + +E D G P + + + V + N++APRF +L L EN G ++ +V+A+D D + YS +G+ + F I +G + + LD E + +++ D KT V I V D NDNPP ++ S + I EN S + V + D D +N V ++ D +F + + +LT + LD E Y + +RAF+ + + + N+ P +V + ++ ++P G + + ATD D G + V Y + ++ F +N+ TGE+ V+ L Sbjct: 375 IDGNIGNVFRVNP-----------------NSGEIRSVSTLDRENV-ASYEL-----------TVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQ-IFSAHVREDAAVGFPVLRVSTLDAD-EGPNAAITFSLLDPSLPFSIH----PSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTD-VTIVVDDVNDNAPRFGQTAYYIEFPEPSE-GEALVARVSASDADDGANGQVFFFMRSQTEN-----FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPL-SSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDV-NGQIAYSVVGGNAS----------RRFDVDAGG----FLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLL-VGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPP-MLNASDYYPVIPENAPSGTTV---LVMDAVDADSPSNAVTM---YSLDDGE----ADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQRE------YNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQL 1027 HSP 6 Score: 114.39 bits (285), Expect = 1.133e-25 Identity = 107/449 (23.83%), Postives = 198/449 (44.10%), Query Frame = 1 Query: 1045 AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHG-SPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFI 2364 + + V+D NDN P+ + + + E P ++ + TD D G+NA +S +L + F ++ +I + +S+ D E E+ D G +P + +L V V D+N+ PRF + G + V+A D D L++S +G + F++DP G I + R + + + + + V+D P++ TV + D + P F F+ E+ + + A + + ++ + L + + +F V +SGE+ + LD E H+Y + + A D+G P SA+ + V D NDN P++ + + N+PP +++ L A D D G N V YS+++ N +F +N +GE+R L + ++L ++A+D G P +H + I + Sbjct: 8 GTGTVTVLVEDENDNLPRFGA--AELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL-RGGDGHFSVNPSTGQIITTASL---DREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAA--RALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFP-RFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVS----YHLASGGNLGD------VFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSS------SRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISV 430 HSP 7 Score: 102.449 bits (254), Expect = 4.132e-22 Identity = 122/510 (23.92%), Postives = 209/510 (40.98%), Query Frame = 1 Query: 271 KGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTNKQCNTQALEIHV--LDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNAN--------VSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD---GSAVLKYSFTG-EP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDI 1743 GD++L +D ET E + ++ A D ++E + +SV+D NDN P + EN P G + + A+DAD+ S N V Y + F L+Q G++ + LDYE K Y T+ A + + ++HV N+ +P F Q+EY + E+ PVG + +V A D+D+ + + F+ L + F + E+TG I + +L + +V A + ++ V + + V + N P + S S ++E V +GV+A+ + L Q N R ++ + D E+ + D G P + V ++D+N+ P K+ EN+ G +L + A D D + G +P YF++ +G +K+ R +DRE + + + DA P T T+ + VLD+NDNP D+ Sbjct: 809 SGDVLLVGELDYET------------EKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPS-NAVTMYSLDDGEADLFVLNQK----TGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTV---FYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFD-VDEVLVNVAITDANDPPVFS-SALYHGRVSE--------AASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLT--SSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLS-SSGLLKTA-RPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSEARDV 1284 HSP 8 Score: 80.1073 bits (196), Expect = 2.958e-15 Identity = 81/336 (24.11%), Postives = 142/336 (42.26%), Query Frame = 1 Query: 1351 GSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPK-TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDE-INNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL--LFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPP 2331 G PR ++ V V+D N+ PRF + + E+ G ++ V+A+D D A++ Y G + +F+++P TGQI + LDRE E + + D P + T+++ V D ND+ P F++ V + + + V A T +D D N + F L + + F V ++ + + + T+ +R D G P SA T+ D + P + G + + + PPG I + A V+Y + + L +F ++ +GE+ V R L ++L + A D+G PP Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGG-DGHFSVNPSTGQIIT-TASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAV---FAVTARDADAGPNGDLRFSLSGSASAG--------FSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAP------GPRSFSFREDQPPGTTITVVAARSSR--RAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPP 315
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751]) HSP 1 Score: 232.261 bits (591), Expect = 7.527e-62 Identity = 213/680 (31.32%), Postives = 324/680 (47.65%), Query Frame = 1 Query: 370 IMAKDKSSDQS-ESIN-IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQ---CNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKA-----VANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVT-----DDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINN-KVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIG---QFQLFLRASDNGRPPR 2334 ++A DK +QS E+I I ++V D NDN+P F+ V E PIG + A+D+D +V I T GTF ++++ G+I + LD+EV ++Y + A D K+ + Q + I+V D NDN P+F + I EN P+ + ++A D DS L ++I Y S R F I TG I+ + + +Y KV A D+ AF + A + I ++DLNDN+PK S + +E E F QVT D D G NV +++ F LD + L I S DYE+ + I D GSP +++ NV V D+N+ P F +D + EN+ G ++++V+A DRD A L YS +G D F+ID H+G I + LDRE + + + T + +V I V+D NDNPP FI + EN S R T +D D NN KVL+ + S N ++ F + S GE+ T KLDRE +Y + ++A D P +A N TI++EDQNDN P + +++ I+ +PPG I+ L A+D D G N N+ Y++ N+ ++ ++ TG + A ++ F A D G+ P+ Sbjct: 1193 VVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINET----TGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSP---RAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQ---AFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTYVME-------DEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDL---KTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIVTN-SILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPEN----SPARLIYTLTVQDLDYGNNTKVLYSIM----SGN---TDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVF------QQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPK 1834 HSP 2 Score: 187.193 bits (474), Expect = 9.647e-48 Identity = 191/685 (27.88%), Postives = 318/685 (46.42%), Query Frame = 1 Query: 310 TICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQ-YFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAV---LKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVI-IEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPML-SAHKNFTIYVEDQNDNDPDW-VTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLL---PIGQFQLFLRASD 2316 T+ Q E+ E++ L T+ AKDK + N+ ++V D NDN P+F V + E+ PIG Y DAD+ RV + P FNLD + + L + K +DY ++ Y ++A D + +T LE+ V+D ND P F Y +LE P II V A D DS +I Y F D+ + + N G I ++ KL + ++Y KV A D + A++ + V D+NDN+P S + E +P L + +D D G N +V+ + Q + F +D +I ++ + D E + I D GS V + V V+D+N+ +P+F K+ + + E+ G ++L + A+D D + Y P F+++ TG + + + LDRE+ R ++++ +D N T I I VLD NDN P FI+ + + E L V + A D D+ + N KV +++ + ++ FK+ E +G I T++ LD E+ + Y + + A D G ++++ TIYVED NDN P + P+ + I N P + ++A D D G NS + Y++ + + + F +N TG ++ + I ++ L +RA+D Sbjct: 758 TLYLQSEVDHEKIPS-LYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSN---TGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAF----DSKVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDH-GTPRRSSSADVKVIVDDVNDNNPHFQQAS--YAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQ-VAQFIVDKQTGKI---TTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPK-AFSLNQVTG-VLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKL-PIGSVVAAVLAVDSDQGD-NGKVRYKIVNGN-------TDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITW-------IYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATD 1409 HSP 3 Score: 181.03 bits (458), Expect = 6.940e-46 Identity = 175/692 (25.29%), Postives = 306/692 (44.22%), Query Frame = 1 Query: 313 ICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIV-KKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAM-AFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFT--GEPNDYFTIDPHTGQIKSGIRRLDREMVER-IEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364 I ++ E++ ++ T ++ S S++ ++ V+++D NDN P F + ++ EN P G + A D D N + Y P F LD P GL+ + LD+EV+S Y + A D + + + + D NDN P F Y +E EN +GQ I ++AID+DS F + + N F + + +G I L K L + + Y V A D + +KA+ N I V D+ND P + N I+ + + + D G NA V + + ++ L +Y S + D+E + ++ D G+P + ++ + V DIN+ +P+F ++L E+ GH VS D D + + SF+ P F +D +TG + S + +D R + + D P++ + ++V+D ND P F + S ++ E S + + ATD D E N ++ + FDS ++ F + G+I KLDRE Y +++ A D G P S+ + + V+D NDN+P + + + N P + + A+D D G N +VTY + FI+++ TG++ +++L + + A+D G PR ++T + + + Sbjct: 450 ITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPD-IGENSLILYSILTPNTPFFLD----PRKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQ---GNADEVFSV-DGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVN--ITVLDVNDEPPIFSKAEYNFTIQ-EHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQSEV---DHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSNTGAL-SLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNII-EVVATDVDSGE-NGRI----SYAFDS---KVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHF------QQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYR-FDTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIV 1109 HSP 4 Score: 176.022 bits (445), Expect = 2.775e-44 Identity = 181/689 (26.27%), Postives = 297/689 (43.11%), Query Frame = 1 Query: 406 SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRF-EKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIK-SGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYS-KVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSS--------HGGI--------------HTVNITANSPPGYLIIKLQATDPDYGENSNVTYS--VMNNNKLLFILNQVTGELRVARLLPI----GQFQLFLRASDNGRPPRHNETSLFIFI 2364 S ++ ++V D+NDN PKF+ P T+ V EN P +Y D D + +V I T G F + +S + L LD E K+ Y +++A D T I + DQNDN P F Q Y I E P G I+ + A DKDS I+Y N+ + I TG + + ++Q+Y F A D+ A+ + IK++D N+++P+ T I N + + T D D N V+ +L N L V + S+ + F + I DHGSP + + + + +I + PRF + ++ + EN + G I V A + V +G F +DP TG I + LD E + ++++ T G + I V+D NDN P F + + ++E+ ++ + ++ ATD D N KV + + ++ +F + + +GEI T K LDRE ++ + IR D+G+P S + + V D NDN P PLS G + T N+ + S PG I+++ ATD D G N+ + YS + N++++ + ++ TG + R + + Q+ ++A D G PP+ + I I Sbjct: 1629 STSVRINVMDRNDNPPKFISPVVTLKVPENSPARL-IYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRS---TGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLS----NDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQ-GQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRL-DDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPENSKVGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGT-NGKVTYSIWTGNEAG-------VFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDN-PPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIII 2298 HSP 5 Score: 170.244 bits (430), Expect = 1.554e-42 Identity = 193/699 (27.61%), Postives = 305/699 (43.63%), Query Frame = 1 Query: 328 EMCCEEVECILKTTIMAKDK-SSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQA---LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPK------ITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHG---SPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG--SAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364 ++ E + +I+A D SS + + + V V D ND PKF K K +V V E+ P+G L A D D N Y+ F+L+Q + L + PLD EV ++ + A D + + +EI+VLD NDNYP F + + E P+G + AV A+D D K+ Y ++ + N TF I E TG I + L +V +Y +V A D + + I V+D NDN P IT + N I N T T++ DDD G+N+ + + Q F++++ E + + D E E ++ D R +L + ++D+N+ AP+F ++E+ + ++A D D ++Y F++D TG +K I LD E V + ++I TD P T + V+D NDNPP F + +SEN + + V ++ A D+D N ++ + + + I + SG I+T LDRE Y + + A P + + I V D+NDN P +++P + T+ + NS P LI L D DYG N+ V YS+M+ N F + + TGEL L +QL ++A D P ++ IFI Sbjct: 1075 QVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQV---TGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRY---KIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVT-------TIKAHDDDSGLNSRIWYTIDSQSPRAHFKINS---ETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSR-NLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLKL-IGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVV-KVTAYDRDSGS-NAELTYSIPSGVEMDKFSIDK------HSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISP------VVTLKVPENS-PARLIYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFI 1740 HSP 6 Score: 148.673 bits (374), Expect = 6.518e-36 Identity = 191/678 (28.17%), Postives = 287/678 (42.33%), Query Frame = 1 Query: 403 ESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQSR-------------LPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQ--ALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI---TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQ---------QYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD-GS-AVLKYSF--TGEPNDY---FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNG 2322 +S + V V D NDN P FV+ V F L A+D+D S + I G F L R SIG+ D E Y + A D N L I V D NDN P FS Y I EN VG I+ V A DKD +I Y SD + F I TG I +L + ++ Y V A DK + + A + I+V D+NDN+P I +L G+ ++ N T ++ + V+D D G N V+ L +ND + AVG +S D E + C D G P KS ++V D+N+ AP+F++ + ++ EN + V+A D+D GS + L Y+ T E Y F IDP +G I + LDRE + ++ + ++V D P + C+VI+ + D NDN P F S ++ EN S S V ++ A D D E N+ +L+ + + P F G + + LD E+ +YT ++ A D G S + + + D NDN P + P S ++V N+ G I +L+A D D + + + + N +G + +A+LL + L ++A D G Sbjct: 40 KSYTVLVYVQDLNDNSPSFVRGTSAKLVVFENDKDFRQKL-IAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGV------DRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDP--QAIFGIHPTTGVIVNNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENAT-IGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVG---------QSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTAT-DLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVV-QLLAQDPDIGE-NSLILYSILTP--------NTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGG--GRSCNATVHVSLTDLNDNQPVF-DPSS-----YSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGG 679 HSP 7 Score: 137.502 bits (345), Expect = 1.801e-32 Identity = 179/709 (25.25%), Postives = 293/709 (41.33%), Query Frame = 1 Query: 370 IMAKDKSSDQSESINI-HVSVSDKNDNWPKFV-KPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQSRLPSIGLIV---KKPLDYEVKSQYFATLEACDTNKQC--NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ--IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLS----------GNSKIEINETDPPRE----------------LFTLQVTDDDIGVNANV--SCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYE-NEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVL-KYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN-NKLLFILNQVTGELRVARLL-----PIGQFQLFLRASDNGRPPRHNETSLFI 2358 I+A+D S I + + + D+ P+F+ + V++ EN +G Y+ RA A+S +V I G F +D P G+I LDYE + L A L+I+V+D+NDN P+F ++ E+ + ++ V A D DS K+ Y + N F I TG I K L + + + D + + + V DLNDN P LS G + TD +E + + TD D G NA + S + D+++DA + +S+ R+ D + I+ ++ D G P ++L V+V+ I P+FE K+ EN G ++L V +D L + S+ E ++YF I +G I + LD E R + + D K + V I V D ND P F + SE + + V ++A DKD N +V F +Q D + I ++G I T + LD E + V +RA D G P + + TI V D NDN P + P G + V + N P + ++ ATD D G N+ ++++V+ + LF++++ +G L + Q+ L ++A+D G PP + ++ + Sbjct: 1932 IIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPENSKVGSYITTVRAR---ASSDAQVTYSIISGNKGRAFYVD----PFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTY---SIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDS-GIPPKSTNCQVKVVVTDLNDNPPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDA---DTGVISARRTIDVRIRDSFIQIPVQAMDQGVP---PQRAL-VYVRIIITREPKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENSNYFRIGQRSGVISVN-KPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVV-NVSAADKDSGA-NGRVWFAIQSGDDKGSFAIDR------KTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVP-----GPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIV 2608 HSP 8 Score: 118.627 bits (296), Expect = 8.180e-27 Identity = 105/361 (29.09%), Postives = 166/361 (45.98%), Query Frame = 1 Query: 451 PKFVKPKQTVNVAENEPIGFYLYLDRALD-ADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIH--VLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENER--EIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD 1509 PKF P V EN +G + R D A R+ I E + F + Q G+I V KPLDYE K ++ + A D + ++ V D ND P F Q Y + E PVG ++ V A DKDS ++ + D + +F I TG I+ Q+ L + + + V A D+ + H V+ + I+V DLNDN P + + G + +++ E P L+ + TD D G NA +S ++ F +D L++ +FDYEN + I+ D G+P ++ ++ V+V D +E+ P F + K + N + G + QV+A+DRD Sbjct: 2302 PKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNI--ENSNYFRIGQRS----GVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDD---KGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVS-VTIRVLDLNDN-PPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGW---LTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRD 2648 HSP 9 Score: 111.694 bits (278), Expect = 1.125e-24 Identity = 157/657 (23.90%), Postives = 277/657 (42.16%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFK-EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN---KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELS------------------DNNIRNTFIIT----------ENTGSIKLQKKLSAKVRQKY-KFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVN-ANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF---TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTF-IDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDRE--INHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTG 2253 + ++V D+NDN P F +AE+ F ++ A D D+ + +V I+ G F +D + + + K LD E + + + D+ K N Q +++ V D NDN P F ++ I E+ G + +V A D D + +++ Y S + I+ +F IT +TG I ++ + ++R + + V A D+ + +A+ + I + PK S K+ N + T++VTD+ G+ +S + N FR +G +S + DYE +R + D +P + ++V D+N+ P F + + E G ++ VSA+D+D A + F +G+ F ID TG I++ R LD E ++ +++ TD P +V I VLD NDNPP F + + ENL S++ I ATD+D N ++ F + + +F + + SG + T D E + Y++ I+A D G P LS++ + V D+++ DP + + + ++ N+ G + ++ ATD D G+ V + N +N TG Sbjct: 2053 LDINVIDRNDNSPAFHPSNMLAQLAEDTG-AFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDST---TGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQ-VKVVVTDLNDNPPLFDPLS-EVNIREDTRTGAVVTSVVATDTDKE--SRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQ-GVPPQRALVYVRIIIT----REPKFELPSYFGKVPENAM-MGTSVLTVRVTDNAAGLPLGRISYNIENS--NYFR---IGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQ-RALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLY-EINATDRDSGA-NARLSFTVIGG-------TGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSF------NRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNALKMNATTG 2674 HSP 10 Score: 55.4546 bits (132), Expect = 1.761e-7 Identity = 58/224 (25.89%), Postives = 103/224 (45.98%), Query Frame = 1 Query: 268 DKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPK-QTVNVAENEPIGFYLYLDRALDADATSANRVH-QYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKS--QYFATLEACDTNKQCNTQALEI--HVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR 918 DKG + + + I Q + E ++ ++ A D+ S + +++ + V D NDN P F P V V EN P+ LY A D D+ + R+ I G F +D+ S L DYE + QY T++A D + + I +V D+++ PSF++ +Y+ ++ N +G + V A D+DS ++ + F+ + N ++ Sbjct: 2451 DKGSFAIDRKTGV--IRTQRALDHETIKT-HHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKF---SGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNALK 2668
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 212.616 bits (540), Expect = 9.775e-56 Identity = 207/760 (27.24%), Postives = 341/760 (44.87%), Query Frame = 1 Query: 154 FKIMEESPIDMVIGNIVH----LHPSFNKASYFIKS-----PFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSS-DQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKK-PLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF---TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKK-LDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 F I E+SP +G + + P+ +Y I S F G L + S +D ETI + + A D S QS + +IHVSV D NDN P+F K + + E+ + + + D D S + + E + F +D S G ++ K PLDYE + Y T+ A D + T ++I +++ NDN PSF I E+ + ++ + A D D ++ + N ++F I +++G I + K+L + Y V A + + N I+V D+NDN+P G+ ++E P + + + TD D G NA V+ +L + F ++ + ++ R D E++ + DHG P A ++ + + D+N+ +P+F + L + EN G NIL+V ASD D A + ++ +G + F ID TG+I + + +DRE + + I D+ P V I V DENDN P F + I E +S S+V + ATD+D+ N +V + + R F + +LTVKK ++RE YT+ IRA D G PM+++ K T+ V D NDN P + +S I +V NS ++ + A D D G N+ + YS+++ N++ F +N +G + L Q+ L + A+D+ + N T I +N Sbjct: 796 FNISEDSPTGTRVGQLTATDRDIGPN-GAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPS------------YTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTID-----STGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSDGTPLT------FDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQG-ESVYNNATIRVLDVNDNAPVFNP--GSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLV---TTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRI-TVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRV-AVVTATDRDEGS-NAQVFYSIV--------RGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVF----NSQSYIGSVR--ENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVINLN 1508 HSP 2 Score: 197.978 bits (502), Expect = 3.624e-51 Identity = 187/674 (27.74%), Postives = 311/674 (46.14%), Query Frame = 1 Query: 358 LKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQS--RLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKD----SDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND---FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTG-EPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN-NKLLFILNQVTGELRVARLLPIGQ---FQLFLRASDNGRP 2328 L+ T M K S QS I ++++D NDN P+F + K T+ V EN G + A D DA + RV I G F +D + R+ +G++ D E + Y T+ A D+ +T + I V D+NDN P F+ E I E +G ++ V A D+D + +F I+ G + F I G + ++K+++ + Y + A+D+ + + + V D+NDN P S S + N + T+ D D+G NA + ++ ND F++++ I + + + D+E + + E+ D + A ++ + V ++N+ P F + + EN ++++VSASDRD L YS G + +D F+ID +G I + LDRE+V I + VTDA P + V I++LDENDN P F S +I EN S+ S ++AATD D+ N ++ + L ++ SG I + LDRE Y + I+A D G P ++ + V D ND+ P + S G + N P ++++ A+D D G N+ +T+S+++N +K +F L+ TG++ L Q + L + +D G P Sbjct: 1171 LRVTAMDHGKPS-QSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVV-----DREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDT--------SAFAINAMNGVLTVKKEINRETVPTYTLTIRASDR-GSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQS-TSVLTVAADDSDVGANAVLRYSIISG--NDEKRFKINSTSGVIMTTTPL---DFEEKSQYGLEVTATDS---KYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTA-DVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILEN-SAPSSFSFKLAATDADEG-TNARITYNLSR---------NDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRP-LINSSSLRGSVR-----ENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNP 1802 HSP 3 Score: 197.593 bits (501), Expect = 4.611e-51 Identity = 199/710 (28.03%), Postives = 317/710 (44.65%), Query Frame = 1 Query: 298 IDLETICAQHEMCCEEVECILKTTIMAKDKSS-DQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADA----------TSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQ--CNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADK-MAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSA--VLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364 +D + + E + + + A+D S +S + + + D NDN P F + T +V E+ IG + A D D TS N H + TG + V + LD+E +S Y L D +T L I+V D NDN P FS YQ + EN P G Q V A D+DS +++G + +D+ + F I +TG I + K + + +Y V A D+ + + + A IFI+ D+ND+SP + S S SK T + T+ TD D G + +L+ + F +DA I S + D E ++E D GS + + + ++DIN+ +P F+ + ++ E+ GH I QV+A+D D S+ ++Y+ + + D F+I+ TG I + LD E + + + D ++ V + V D NDNPP F + ENL++ V + ATD D N K+ + + S N ++ + + T GEI T LDRE +Y++ I A D L A I + D+NDN P + P NI+ +SP G + +L ATD D G N VTY++++ N+ F L+ +G L V L I + L ++ASD G P + S+ + + Sbjct: 217 VDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGV------------VTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQ---VSATDRDSSTNGALVFGIIKGNDDGV---FTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIE--DVNDHSP-VFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSEL---DRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPY-VFRVSESSSPGHQIGQVAATDADDSSNGDVRYALS-DNTDVFSINTSTGLITLKTQ-LDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAV-CYVTATDADSGA-NGKISYSIL----SGNENMAFAMDRFT--GEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGP-------SRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSV 884 HSP 4 Score: 187.963 bits (476), Expect = 3.723e-48 Identity = 170/645 (26.36%), Postives = 283/645 (43.88%), Query Frame = 1 Query: 421 VSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISG--VFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVK-KLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLL---PIGQFQLFLRASD 2316 ++V D NDN P F V E+ +G + A+D D R+ + T F +D S G+I K D E K+ Y L A D + +EI +LD NDN P FS +Y + E+ +G ++ V A DKD+ + Y F + N + F + TG + + + L + R Y + D+ + +++ I V D+NDN P + + S+++ N + + TD D N + +++ ND + + +S +S DYEN+ ++ D G P + + ++D+N+ +P F ++ E+ G ++ V+A+D D L+Y +G F ID ++G I+ LDRE + + D ++ V I + D NDN P F G VF +SE+ S ++ G++AATD D D N V + L D +F + S ++T+K +LD E Y V + A D G P S+ + V+D NDN P + L +T + N G + + ATD D G N ++YS+++ N+ + F +++ TGE+ L I + L + A D Sbjct: 156 ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVD-----SQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSF---TSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTD-TSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQ----VSATDRDSSTNGALVFGIIKG--NDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVS-SELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIF---QGPYVFRVSESSSPGHQI-GQVAATDAD-DSSNGDVRYALSDNTD---------VFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSL------YTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADD 764 HSP 5 Score: 165.622 bits (418), Expect = 3.625e-41 Identity = 160/569 (28.12%), Postives = 257/569 (45.17%), Query Frame = 1 Query: 592 GTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNT--QALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKL-DREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLL 2277 G F +D S SI +K D E +S+Y T+ A D +C+ + I V D+NDN P F Y I EN P Q I V A D+DS I Y N F++ TG I+ L + + Y ++ A D F I V D+NDN+P +LS + + L D D+G+NA +S L+ + F +D+ G + + +FD E + + + D GSP ++ + + D+N+ P F + E+ G ++ V+ASD+D A L+YSFT G N FT+D TG + R LD E + + VTD P T ++I V D NDNPP F + + EN + ++V +ATD+D N ++F + D + +F + S I+++ K D E Y + ++A D G+P+ TI++ED ND+ P + +P + ++ I ++ G ++ + ATD D G + Y +++ N K F ++ +G +RV+ L Sbjct: 10 GMFTIDSS-TGSITTTGRK-FDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAI-VTATDRDSGTNAAITYSLFSG-----ENKFMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHTTFVP-----LITVDDVNDNAP-FFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQG----VIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVS-RSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQV----SATDRDS-STNGALVFGIIKGND-------DGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVF-SPSN-----YSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSEL 541 HSP 6 Score: 154.066 bits (388), Expect = 1.202e-37 Identity = 183/688 (26.60%), Postives = 307/688 (44.62%), Query Frame = 1 Query: 340 EEVECILKTTIMAKDKSSDQSESINIHV-SVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADA-TSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIN-DFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS---AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPK--TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 E E + T++A+D ++ + + V V D+NDN P+F N+ EN P + + A D D+ T+A + E N + ++ PLD+E K Y + A D + T I V D NDN P F+ Y+ + E+ VG + + A+D D + ++ Y +S + ++ ++ G I+ + + + Y+ + A D + + A + I++ D+NDN P +S + ++ + + T+ +D D G NA++ N F LDAV + ++S RS D+E + D GSP L ++V DIN+ P F + ++ EN G QVSA+DRD S A++ G + FTID TG I S + D E R ++ + D K T Q T+ IE D ND+ P F + I E+ S V + ATD D +L++ S N + + F + SG I +LDRE +Y++++ A D G S+ TI ++D NDN P + P + ++ +S PG+ I ++ ATD D N +V Y+ +++N +F +N TG + + L Q+ + + A D G P R + T + + ++ Sbjct: 30 RESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAA-QVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTV-----TPLDHETKDSYTMRISAFD--GKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSL--VSGD---TSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPS-RSGQATVEIEILDVNDNRPVFSSAQYTASVD-EDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAV-TGVVTVS--RSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAG---TQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTG-IISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIE--DVNDHSPVFSPSNYSKQIPESTVIGSTVV-TVTATDLDSGPRG-----RLEYRLISGNVKGA---FNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGP-------YVFRVSESSSPGHQIGQVAATDADDSSNGDVRYA-LSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVD 676 HSP 7 Score: 130.954 bits (328), Expect = 1.486e-30 Identity = 153/594 (25.76%), Postives = 259/594 (43.60%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQL---QHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPD 2175 + ++V+D+NDN P F + + + E IG + + A D D S +V I + T F ++ + + L VKK ++ E Y T+ A D T E+ V+ D NDN P F+ Q Y + EN ++ V A DSD+ + + +S N+ + F I +G I L + + +Y +V A D + A N+ I+V +LND +P T + + + N P ++V+ D ++S ++ +D F +D I S+ D E ++ D G+P + + + D N+ +P+F+ +LEN +++A+D D + ++ ND F I +G I + LDRE ++ I D P+ T+ + V+D ND+ P S ++ EN + V RI A+D D +N ++ F L +H + +F + +G+I T LDRE YT+ I D G P LS+ + I V D++DN P + P + V I+ + P G I+++ A D D Sbjct: 1294 VAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINA--MNGV-LTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAA--DDSDVGANAVLRYSIISGNDEKR-FKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSK----YTAKTNVTIRVINLNDITPAFTQQNYTASVRENS---PTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGII---STADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITLA-QPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVM-RILASDADTG-LNAELTFSLLSNEH----------KSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRF-QPTE-----YNVTISESLPRGASIVQVTARDID 1852 HSP 8 Score: 111.309 bits (277), Expect = 1.484e-24 Identity = 88/280 (31.43%), Postives = 130/280 (46.43%), Query Frame = 1 Query: 1540 GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFT--IYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364 G FTID TG I + R+ DRE R + ++ DA G+ V+I+V DENDN P F S VFNI EN + + ATD+D N + + L F +N+ +++GEI TV LD E +YT+ I AFD H F I V+D NDN P + + G V + G ++ +L A D D G N+ ++YS+++ + F ++ G +R +Q+ LRA D G P R + ++ I I Sbjct: 6 GNDQGMFTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQV--AIVTATDRDSG-TNAAITYSL---FSGENK-----FMMNSKTGEIRTVTPLDHETKDSYTMRISAFD------GKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAV------GSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDS-QGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEI 261 HSP 9 Score: 60.077 bits (144), Expect = 5.586e-9 Identity = 51/167 (30.54%), Postives = 76/167 (45.51%), Query Frame = 1 Query: 370 IMAKDKSSD-QSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDAD-ATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALE--IHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKD 858 I A+D + Q+ SI I V+V D ND+ P +V EN+P ++ A DAD +A + E F LD + + + K PLD E ++ Y + D + + I V+D++DN P F EY + I E+ P G I+ V A D D Sbjct: 1689 IQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNT---TGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDID 1852
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 208.764 bits (530), Expect = 1.409e-54 Identity = 215/753 (28.55%), Postives = 350/753 (46.48%), Query Frame = 1 Query: 151 TFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSP--FLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK-EPTGTFNLDQSRLPS---IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYG--FHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSP--KITSL---SGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND---FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPND--YFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVM-NNNKLLFILNQVTGELRVARLLPIGQ-----FQLFLRASDNG 2322 TF + EE P +G + + AS F SP F S+ G + ++RID ET ++ L+T + ++ I++ V V D NDN P+F T+ + E+ + ++ A D DA + V I + T TF+L + P+ + +I KKPLD E Y + A D T + I +LD+ND+ P F+Q Y I EN G I+ V A D+DS I Y + + N+I F + +TG I+ ++ L +V+ Y F V A+D + +A + I V D NDNSP KIT L +G+ I + + + VTD D N+ ++ +D F+++ +G Y + + D E + D G P + + V D+N+ +P F + + E + G +LQ++A+D D + + YS TG ND +F +D +G + + + LDRE V + I I D PKTG TV + ++D NDN P F+ S ISE S + V +++ATD D + N ++ +++ + D+Q +F++ T++G + T +LDRE Y+ + A D G P L + + + D NDN P + P+ + +I N PPG L +++ ATD D G N+ ++Y ++ NN F ++ TG ++ L + F L + A D G Sbjct: 13 TFHVQEEQPPGTYVGKV-------DGASAFEGSPKQFGFNSNTGVISTTARIDRET--------TTQISLQLRTL-------NPSNQPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSI---FDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDG-GVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNG--DDEGCFKVEFLG--FYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGG-NDLGWFQVDFQSGLVTTA-KPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVL-QVSATDVDSGD-NGRITYEISSS-DAQ----VNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFY-PVE-----YFASIMENEPPGKL-LQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTG--VISTLASLDHEVEEFFSLIISAKDGG 717 HSP 2 Score: 182.956 bits (463), Expect = 1.518e-46 Identity = 184/666 (27.63%), Postives = 291/666 (43.69%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK-EPTGTFNLD-QSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIN-DFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTF------IDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK--LLFILNQVTGELRVARLLPI-GQFQLFLRASDNGRPPRHNETSLFIFI 2364 + + V+D NDN P F T N++E G Y+ A D D V I G F +D QS L + KPLD E S T+ A D + + + + + ++D NDN P F + Y+ I E +G ++ V A D DS +I Y SD + F + TG + + +L + + Y F V A D +V + + + D+NDN+P + + I NE PP +L + TD D G NA +S ++ N +F +D+ I S++ S D+E E I D G+ +NV V + + P F + + EN +G + +V A+ +D + + Y+ +G+P + F +D G IK +DRE + + +I P + Q TV IEVLD NDN P F +DI G + + + V AA D D + N V +QL +E + + + SG I +KL YTV++ A D+G P H TI++ ++ P + LSS + ++ A+ P Y + A D D G+N + YS+ N+ L I +R + L + G + L +RA+D G P + I+I Sbjct: 411 VLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGL----VTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISS-SDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSV-KVELTISDINDNAPVFYPVEYFASIMENE--PPGKLLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVI---STLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNGSISYAIVSGDPTNLFLVDSTGGIIKIN-GDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQ-------VVYNAAAVDLDAGK-NGLVRYQLTSN--------AEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSP--PQHSTMTIHITLSINHPPKFT--LSS----YVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIFPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYI 1040 HSP 3 Score: 158.688 bits (400), Expect = 3.993e-39 Identity = 191/686 (27.84%), Postives = 299/686 (43.59%), Query Frame = 1 Query: 343 EVECILKTTIMAKDKSSD-QSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVK--KPLDYEVKSQYF-ATLEACDTNKQCNTQA-LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAV--GNEIYSLSSIRSFDYENEREIKAE----IECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNI--LQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDRE-MVERIEINIIV--TDAIENPKT---GQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLLPIGQFQLF---LRASDNGRPP 2331 EVE I AKD + +++ ++V+V +K DN P F+ V EN P G + A D + + + + +PT F +D S G I+K +D E K+QY A + T K + QA + I VLD+NDN P FS ++I + VGQ + A+D D+ + Y +N I +G IKL +KL+ +Y +V A+D + H + I I L+ N P +LS + + F + D D G N + + Q N+ L + G ++Y S+ + +K + D G P A + ++++D N+ F + + + EN G + L A D + + YS + +F +D +GQI + +R LDRE +++ N+ + +A+ N T + VI+ V D NDN P F +SE LS RI A D D+ + N K + L + F + +GE+ K LDRE +Y + ++A D L + I V D ND P V P S + TVNIT ++ G L+I L A+D D G+N + YS+ N N +F + TG L VA+ L QL+ + A D+G P Sbjct: 702 EVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDK-NGSISYAIVSGDPTNLFLVD-----STGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLT----SNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMT-IHIT---LSINHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQG--NEEGLFGIFPGGKLYIRKSLL-------QALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSES-HFAVDVRSGQITTRVR-LDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSE-LSLPGSPVFRIKAMDADEGD-NAKFFYSLVSGTGM------DKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRP--VFPESDY----TVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIP 1348 HSP 4 Score: 156.762 bits (395), Expect = 1.702e-38 Identity = 165/686 (24.05%), Postives = 304/686 (44.31%), Query Frame = 1 Query: 370 IMAKDKSSD-QSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQAL--EIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLS-AKVRQKYKFKVFAADKMAM----AFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETD-PPRELFTLQVTDDDIGVNANVSCQLLQQY-INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREI----NHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQ--FQLFLRASDNGRPPRHNETSLFIFING 2370 ++A D S Q ++ IH+++S ++ PKF +V ++P+ + + A+D D+ + Q + P G P L ++K L +K Y + A D + ++ I++ D ND+ F ++ + EN G + + A D I+Y + F + +G I + +L ++ + V+ AM + A + + V DLNDN+P + I ++E P +F ++ D D G NA L+ ++ F +++ E++ LS ++ D E ++ D + + + + V D N+ P F + + + E+ G ++ ++ASD+D + ++KYS + G F ++ TG++ + LD E + E+ I D P + V + VLD NDN P F + EN+++ V GR A+D+D N + F + S+ ++ + + EI T+ +D E ++ + + A D G P LS K+ T+ V D+NDN P +V+P ++ G ++N ++ + A DPD N VTYS+++ N F L+ TG+L++ +P +QL ++ASD G+P R +T + +F G Sbjct: 918 VLASDSGSPPQHSTMTIHITLSI--NHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDS---GKNGQLFYSIPQGNEEGLFGIFPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSESH-----FAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAV--YAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELH-LS--KTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVA-KSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPV-GRCTASDRDTGT-NAHIAFSMYSQTPSKTFSVN------SATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAG-SSLN----------VMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQIPDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEG 1568 HSP 5 Score: 144.436 bits (363), Expect = 1.109e-34 Identity = 157/589 (26.66%), Postives = 258/589 (43.80%), Query Frame = 1 Query: 640 VKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINE-TDPPRELFTLQVTDDDIGVNANVSCQLLQ---QYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKK-LDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIG---QFQLFLRASDNGRPPRHNETSLFIFIN 2367 ++KPLD E+ Y TL D + + I V D NDN P+F+ Y I E G ++ + A D D + Y ++ N F + +G + K L + + A D A + + + D NDN P+ + + K I+E + + TD D G N ++ ++ Q F L+ +++ S + D E + + DHG P+ ++ + + + DIN+ AP F ++EN G +LQV+A+D D +AV+ Y G N+ F+ID TG I S + LD E+ E + I D V + VL++ DN P F+ F + EN+ + V GR+ AT KDK N + + + + D N +F V +G I+ + +DRE Y + + A + LSA I V D+NDN P + T V+I G ++ A D D G+N V Y + +N + L +N +G +++AR L G Q+ + + ASD+G PP+H+ ++ I ++ Sbjct: 379 LQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSY---SITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDH-GSAPKTGSTTVTVTIIDGNDNKPRF--MKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQL---DRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGK-LLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVI-STLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLV-GRVYATTKDK---NGSISYAIV-SGDPTN------LFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSV------IVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLS 939 HSP 6 Score: 119.398 bits (298), Expect = 4.434e-27 Identity = 129/458 (28.17%), Postives = 205/458 (44.76%), Query Frame = 1 Query: 1063 IKVKDLNDNSPKITSLSGNSKI----EINETDPPRELFTLQVTDDDIGVNANVSCQLLQ-QYINDFRLDAVGNEIYSLSSI---RSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSA--VLKYSFTGEP---NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPP----TFIDI-SGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESG--EILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364 ++V D+NDN P+ +L +I ++N T+P TD D G N V + F L S + + D E + I D G+P + + +N+ + D N+ AP F ++ + EN + G +IL+VSA+DRD + +KY+ + N F +D TG I++ + LD E+ N+I +D K TV I VLD NDN P T++ +G I S + I TDKD + N++ ++ + D E FKV G I K LDRE+ Y + + D G+P S I V D NDN P + + +T NI+ + G +++L ATDPD G+N V+YS+ N L F ++ +G + A+ L + + + A D+G P+ T++ + I Sbjct: 83 VQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPIN-----TATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTK-QNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNT-NSQTELKITNGDD-------EGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTS------NAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTI 520 HSP 7 Score: 86.2705 bits (212), Expect = 5.492e-17 Identity = 107/388 (27.58%), Postives = 172/388 (44.33%), Query Frame = 1 Query: 1279 LSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPH---TGQIKSGIRR--LDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDW-VTPLSSHGG---IHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK--------LLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEV 2379 +S+ D E +I ++ + P N S+ V V DIN+ PRF + L++ E+ + +A+D D + Y+ +G+ F++ TG I + LDRE + ++NI TD G C + I +LDEND+ P F S + +I+EN + R++A D+D N + + + +D+ S IF + + +G I T + LD E+ ++YT + A D G+P + TI V D NDN P +T L H G I + N N+ Y+++ TD D NS + N + L F Q+ L L+P + L L +D G P R T F+ I+ +V Sbjct: 51 ISTTARIDRETTTQISLQLRTLN---PSN-QPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSIL-RVSAADRDSGS-NGDIKYAID--WDAIQ---SNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILV----TDKDSNTNSQTELKITNGDDEGCFKVEFLGFYFIQLQKPLD-RELVPF--YNLTLNVTDKGVPSR--STLGFVLIDVTDV 418 HSP 8 Score: 69.3218 bits (168), Expect = 9.644e-12 Identity = 71/270 (26.30%), Postives = 115/270 (42.59%), Query Frame = 1 Query: 292 SRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQS--RLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQN--DNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAK-VRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLN 1083 + IDLET+ A + + +MA D+ S + S +I V V+D+NDN P FV P A + A D D S +V I G FNL S +L I I P Y++ T++A D + + V + P+FS +YQ + EN G ++ V A S L I Y L+ ++ + F + ++TG +K + + + + + V+A DK + + A + I V+D+N Sbjct: 1430 AAIDLETMPAGRDS--------FQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPP-----AAAAGSSLNVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQIPDNPTIYQL------TIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEY---YLTSDSSKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO33359 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSF2]) HSP 1 Score: 185.267 bits (469), Expect = 3.457e-48 Identity = 181/689 (26.27%), Postives = 310/689 (44.99%), Query Frame = 1 Query: 343 EVECILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATS-ANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN----KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAM----AFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIY------SLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD---GSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDK-DKDE-INNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331 E + + ++ A+D+ S +I IHV ++D NDN P F + V+EN P+G + +A+D D+TS A+ ++ G+F +D S + ++ +K D+E +Y T+ DT N + I V+D+NDN P F+Q+ Y + ENF VG ++ V A DKDS + Y H N + F+I ++G I L K L + + Y + D M + + + V N+ V +N+++P+ + N+ I E P + ++ +DD+ V A ++I + DA ++++ ++ R DYE R R+E ++ EN G +L + A DRD V Y T FT + TG + S LDRE V + + ++ D P+T V +EVLD NDNPP F + +SE S +++ R++A D+ DKDE +N ++ + L+ S+ I++ +G+I + +D E +Y+ E+ A D G L+ + I + D NDN P + P + V + N G + ++ A+D D N V +S++ N F+++Q TG + + L + ++ L ++A+D G PP Sbjct: 70 ETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAVDKDSTSNADLIYSIQNGNNNGSFTIDNS---TGEIMTRKEFDFEKTERYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPPEFAQKRYTATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHS---GNTDDAFVIIADSGDISLDKPLDKETIENYTLVLIVTD-MGIPPLESIKRMVVNVI--VSGVNEHAPRFLNEFYNASIP--ENLPLGTSIVRVRAVEDDVSVGA--------RFIYVIK-DAASSKVFLVNQTGDITLARELDYETRR----------------------------------RYE-----FEMYENVTSGTQVLTLFAHDRDEGINGQVFYYIVTSSVKGVFTTNSTTG-VVSLTAELDRESVYQYNMLVVAQDGGSPPRTASAHVKVEVLDCNDNPPVFTTLYYTLQLSEATSIGTRIL-RVSANDRDDKDEGVNAEIRYFLKDAIVSKKFSIND------TTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRP-YFLPTRYY-----VQLVENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDPP 685 HSP 2 Score: 125.946 bits (315), Expect = 2.165e-29 Identity = 159/628 (25.32%), Postives = 276/628 (43.95%), Query Frame = 1 Query: 253 FLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGT--FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVT-----DDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSI-------RSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFT---GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENP-KTGQCTVI-IEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQ-LQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVE--DQNDNDP 2067 F+ ++D GD+ L +D ETI E +L T M + + + ++V VS N++ P+F+ ++ EN P+G + RA++ D + R Y+ K+ + F ++Q+ + + + LDYE +++ Y+ E+ EN G Q++ + A D+D + ++ F+ + ++++ F TG + L +L + +Y V A D + A A++ ++V D NDN P T+L ++ + R L+V+ D D GVNA + F DA+ ++ +S++ ++ DYE E+ D G R S+ + + D+N+ P F ++L+EN G + QV+ASD D S K F+ G + F ID +TG + + + LD E V + I TD + P + Q ++ + V++ NDN P F +I EN ++ V R+ A+D D +N KVLF L+ D + F V + +G + T K LD E YT+ I+A D G P L++ + ++V + NDN P Sbjct: 264 FVIIADSGDISLDKPLDKETI--------ENYTLVLIVTDMGI-PPLESIKRMVVNVIVSGVNEHAPRFLNEFYNASIPENLPLGTSIVRVRAVEDDVSVGAR-FIYVIKDAASSKVFLVNQTG----DITLARELDYE-------------------------------------TRRRYEFEMYENVTSGTQVLTLFAHDRDEGINGQV---FYYIVTSSVKGVFTTNSTTGVVSLTAELDRESVYQYNMLVVAQDGGSPP-RTASAHVKVEVLDCNDNPPVFTTLYYTLQLSEATSIGTR---ILRVSANDRDDKDEGVNAEIRY---------FLKDAIVSKKFSINDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQLVENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTN-KSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKMYSASIDEN-TTVGHVILRVTASDLDS-SLNGKVLFSILEGNSDGK--------FVVDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSP 813 HSP 3 Score: 112.079 bits (279), Expect = 4.211e-25 Identity = 109/382 (28.53%), Postives = 180/382 (47.12%), Query Frame = 1 Query: 1159 LFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQ---CTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFT--IYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVARLL 2277 L T+ D D +NA V+ ++ + + + N + S + FDYE +R + D GSP A +++V + D N+ P F+ + ++ EN G + +V A D+D + A L YS G N FTID TG+I + + D E ER + I V+D P V+I V+DENDNPP F + EN + + V R+ A DKD N +L +++ S N + + +SG+I K LD+E NYT+ + D G+P L + K + V N++ P ++ + +I N P G I++++A + D + Y + + + +F++NQ TG++ +AR L Sbjct: 22 LLTVLARDQDAALNARVTYSIVS-FSTESDYFVIDNITGVVRSSKEFDYETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAVDKDSTSNADLIYSIQNGNNNGSFTIDNSTGEIMTR-KEFDFEKTERYNLTISVSDT-GVPALSSLNFANVVIIVVDENDNPPEFAQKRYTATVYENFTVGTVVL-RVTAHDKDSGP--NAML---KYSIHSGNT--DDAFVIIADSGDISLDKPLDKETIENYTLVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAPRFLNEF------YNASIPENLPLGTSIVRVRAVEDDVSVGARFIYVIKDAASSKVFLVNQ-TGDITLAREL 385 HSP 4 Score: 95.1301 bits (235), Expect = 7.440e-20 Identity = 87/316 (27.53%), Postives = 149/316 (47.15%), Query Frame = 1 Query: 1417 PRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYS---FTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSA--HKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331 P F + + E+ G +L V A D+D + A + YS F+ E +DYF ID TG ++S + D E ++ D ++ T+ +++ D NDN P F + +SEN + + R+ A DKD N +++ +Q+ ++ + I +GEI+T K+ D E Y + I DTG+P LS+ N I V D+NDN P++ +T + N G +++++ A D D G N+ + YS+ + N F++ +G++ + + L I + L L +D G PP Sbjct: 1 PIFNQTLYSAIIPEDFTVGGTLLTVLARDQDAALNARVTYSIVSFSTE-SDYFVIDNITGVVRSS-KEFDYETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSEN-TPLGTIVARVKAVDKDSTS-NADLIYSIQNGNNNGSFTIDN------STGEIMTRKEFDFEKTERYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPPEFAQKR------YTATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHSGNTDDAFVIIADSGDISLDKPLDKETIENYTLVLIVTDMGIPP 300
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO39230 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAP5]) HSP 1 Score: 182.57 bits (462), Expect = 2.459e-46 Identity = 191/638 (29.94%), Postives = 290/638 (45.45%), Query Frame = 1 Query: 370 IMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK-EPTGTFNLDQSRLPSIG-LIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDS-------DLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLS-AKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDD--IGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENE-REIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFT---GEPNDYFTIDPHTGQI-KSGIRRLDREMVERIEINIIVTDAIENPKTGQCT--VIIEVLDENDNPPTFIDISGVFNIS--ENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPD-YGENSNVTYSVMNN 2217 + AKD + ES ++++V D+ND P F ++V E+ PIG + A DAD ++ +I K +P G F++ S P G L+V LD+E KS Y + A D K +T + + + D ND P FS Y+ I EN G ++ V A D DS D K + + + N ++ TGS +L ++ S KV F V A D H A A I + + D+NDN+P+ + +E N+ ++ V DDD G NA +S +L + F +D + I + +FD E + K ++ D G+PR A +HV D N+ P+F + F + + EN G+++L+V+A+D D ++ F G F IDP G + SGI LD E + I + V D P G T V+IE+LD NDN P F I ++N S E++ + V + A DKD N F + D + EP G I T LD+E ++ +++ A D G L I V D NDN P W P G I ++A + KL+A DPD + ++ +T+S+ N Sbjct: 2645 VTAKDGVN--KESAILYITVVDQNDQPPVFAPKSYAISVPEDSPIGTSVLDIYATDADVGENAKITYFISKGDPEGKFSIVTS--PVKGELVVNGKLDFETKSSYTLEVTATD-GKFSDTAVVTVTIQDVNDLPPVFSSPLYESRIQENTGPGAGVVMVTASDIDSPTISFSLDDRGKDYFQITPIRASGPGNVWVGDIRTGSKQLDREESPVKV-----FTVIANDGK----HTAQAEIRVNLTDVNDNAPRFPASPYIGYVEENKPSGTSVMYIQAVDDDDPLAGGNAKLSYELTDSAGDKFSIDPLSGLI---KTKVTFDREQTPNKFKVRVKATDAGNPRLSASVDGIIHVSDANDHKPKFTEKFYRGSVAENAPPGYSVLRVTATDEDVGPNAEFEFVVVQGNDPHAFYIDPFNGTVLVSGI--LDYEKKKEYTITLTVADRGMPPLQGDETAYVVIEILDANDNAPEF--IPKIYNASVLEDVGARQPVL-TVTAVDKDSGP-NGNFTFAIDPRSDPDDAFTIEPNPNNASIGIIRTRVPLDQEKTPSFHLKVTATDAG--GLQGEGEVRINVIDVNDNGP-WFVPPFFVGQIKE-GVSARQ----FVTKLKAYDPDAFVKDQVITFSIYNG 3251 HSP 2 Score: 162.155 bits (409), Expect = 4.884e-40 Identity = 186/714 (26.05%), Postives = 311/714 (43.56%), Query Frame = 1 Query: 292 SRIDLETICAQH-EMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVK--KPLDYEVKSQYFATLEACDTNKQC-NTQALEIHVLDQNDNYPSF--SQQEYQIEILENFPVGQQIIAVEAIDKD-SDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYS-LSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDP---------HTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHN-YTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVM-NNNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFI 2364 +R+ LET E+ ++VE I T K + + I I VS N+ PKF + T ++ EN G + R +T A ++ + P R+ G I+ +P DYE + Y A D +T + I+++D ND P+F + +LEN P ++I+++AID D S+ ++ Y E+ DN F I +TG I + L +V KY +V A D + +K A ++I V D ND P S I + E P + + TD D+G NA ++ + + + + V + + L D+E + E+ D G + A + V ++D+N+ P F + ++ EN G ++ V+ASD D S + +S DYF I P G I++G ++LDRE + + A + T Q + + + D NDN P F + + EN S + V I A D D + T + ++ +P+ SG I T DRE N + V ++A D G P LSA + I+V D ND+ P + + ++ N+PPGY ++++ ATD D G N+ + V+ N+ F ++ G + V+ +L ++ + L +D G PP + + ++ I Sbjct: 2419 ARLQLETGKKLLLEVSAKDVESIAGT---QPGKPTKYTTQIEILVS----NEEPPKFSQQVYTASINENMETGSTV--TRITATSSTGAEISYENVDTNPRAKILF---RVQPDGYIITGDRP-DYERGTTYNMQFAAKDKKTLLYSTVKVVINIIDVNDVSPAFLLAINTRNARVLENKPAPTKVISMKAIDDDGSEPHRRVTY---EMKDNP---NFQIDASTGMITTKTTLDREVTPKYDVEVTAKDGV----NKESAILYITVVDQNDQPPVFAPKS--YAISVPEDSPIGTSVLDIYATDADVGENAKIT-YFISKGDPEGKFSIVTSPVKGELVVNGKLDFETKSSYTLEVTATD-GKFSDTA--VVTVTIQDVNDLPPVFSSPLYESRIQENTGPGAGVVMVTASDID-SPTISFSLDDRGKDYFQITPIRASGPGNVWVGDIRTGSKQLDRE---ESPVKVFTVIANDGKHTAQAEIRVNLTDVNDNAPRFPASPYIGYVEENKPSGTSVM-YIQAVDDDDPLAGGNAKLSYELTDSAGDKFSIDPL-----SGLIKTKVTFDREQTPNKFKVRVKATDAGNPRLSASVDGIIHVSDANDHKPKFTEKF------YRGSVAENAPPGYSVLRVTATDEDVGPNAEFEFVVVQGNDPHAFYIDPFNGTVLVSGILDYEKKKEYTITLTVADRGMPPLQGDETAYVVI 3087 HSP 3 Score: 133.65 bits (335), Expect = 2.474e-31 Identity = 176/727 (24.21%), Postives = 304/727 (41.82%), Query Frame = 1 Query: 154 FKIMEESPIDMVIGNIVHLHPSFNKASYFIKS-----PFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIF-------KEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQAL---EIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFT-LQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLS-------SIRSFDYENEREIKAEIECYDHGSPRNVAHK-----SLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGI--RRLDREMVERIEINIIVTD-----AIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGE-NSNVTYSVMNN 2217 F + E++ ++G I+ S + Y I S F+ + D G ++L+S +D E Q+ + + E I ++++ + V + ND++P F + +V + E+ +G + A D D S+ KE G F +D P+ G I V LDYE + + + A D K+ + Q L + + + NDN P+F + Y+ + E G+ + V A+D D D + Y S F + ++TG I L L + +Y +V A D + + ++ V D N+N P+ T+ + I E DP T L TD D G N ++ + DA ++S+ S+ S D EN+ A I+ D S ++ + + L ++V+D+N+ P F + + G NIL V A+D D A +KY+ F +D +G +++ RL E +++ + + D + K + T IE+L N+ PP F +I+EN+ + S V RI AT EI+ D+ R ++ +F+V G I+T + D E Y ++ A D + S K I + D ND P ++ +++ + N P +I ++A D D E + VTY + +N Sbjct: 1945 FMVSEDAKYLSLVGIILARSISGARLDYKIVSGNVGDKFIAMGD-GRILLNSLLDFERDQTQYNLKVKATEQI----------PDGLDSTVDVKIDVINANDHFPYFDQQLYSVQIPESTAVGVLVQEVTAKDCDCLSSCTCSPGFLTYSIEPSKEQGGKFYID----PATGKISVSVALDYEDQRYHLLKVYATDKGKK-SFQGLCFVNVTLTNVNDNRPTFLKSAYEFRVAEGAATGESLAIVVAVDADGD---AVTY-----SKAGGALQFSVDQSTGVITLNSALDPN-KNQYTLQVMAKDSGGLT---STVSVTFNVADANNNVPQFTNC---GTVSIRENDPRDTKITQLTATDADRGQNGQITYSI---------EDASSQTLFSIEPRTGVVRSLTSLDRENKDSYNAIIKAEDGSSKQDESERLLWYCYLTINVEDVNDNRPYFLAAKYFGSVFSSAPNGSNILTVQATDADSGSNAKIKYALLDSAGGLFRLD-SSGILRTNTNPARLQLETGKKLLLEVSAKDVESIAGTQPGKPTKYTTQIEILVSNEEPPKFSQQVYTASINENMETGSTVT-RITATSSTGAEIS-------YENVDTNPR--AKILFRVQPDGYIITGDRPDYERGTTYNMQFAAKDKKTLLYSTVK-VVINIIDVNDVSPAFLLAINT----RNARVLENKPAPTKVISMKAIDDDGSEPHRRVTYEMKDN 2615 HSP 4 Score: 132.109 bits (331), Expect = 7.953e-31 Identity = 184/740 (24.86%), Postives = 308/740 (41.62%), Query Frame = 1 Query: 268 DKGDLMLSSRIDLET-----ICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSR----LP-----SIGLI-VKKPLDYEVKSQYF----ATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND----FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAH-KSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREM----VERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPP----GYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQ---VTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSL-FIFIN 2367 D G + L ++D ET I + + +E L + ++AK V++ D NDN P+F + + V + L RALDAD+ S V T+ +D R LP G+I + + Y S Y AT A D +++ + + VLD PSF Q+ Y + E VG + V A+ + F K + N NTF + G I + K L + Y + ++ + H +++ + D+ND++P TS I+ + L + D D G N + +L D F +D+ +I ++ + DYE + I D+GSP+ ++ +++ V D N+ +P F F + K+ +G ++LQV A+D D + YS G + FTI+ + G+ +D+ + ++ + + D +P++G TV I V D PP F+ + E + + +V G AAT + L +T S N +F++ S G + ++LD E Y ++I A DT SA I V + NDN P +V + G I I SP G +I +L A D D E +T+ V ++ K LF ++ VT + + L I F + +A DNG PP+ + + +F++ Sbjct: 1058 DTGQVYLIKKLDFETKSYFPIAVRAKYSGGAIE--LASEVVAK-------------VTIVDVNDNGPRFAFHESSKTVVIDSFSAKDTQLARALDADSGSLGEV----------TYGIDGGRSTSNLPFNINVKTGMIFATREILYTQGSSYIIIVVATDGATDGSQKIQKFTVNVQVLD-TPRPPSFPQKTYSAPVTETAGVGDTVTTVRAVYSKPNAFLK-----YTFVSGNEDNTFCV-NGFGIISVAKSLDREKVAGYTLGM----RVTLGQHVDDTTVYVNLTDINDDAPHFTSAIYRRSIKEGLAEDTEILPPVIAVDHDFGSNGKILYSILSGVHPDWDKYFNIDSATGKI---TTKMTLDYETHKSHTLFIRAEDNGSPKRLSGIAQVDIDVIDRNDNSPVFAAAFYRAKISLGAVKGTSVLQVHATDLDSGQNGQITYSIIQGNEEEAFTIN------EQGVILVDKSLTTVAADKFSLKVEARDKNASPRSGSVTVEINVY-LPDGPPMFVVSPVTVYVKEGVPANHRVAGVKAATSE-----------ALTYTLLSGNE---AGMFRINPSTGSLDATRELDYEERRRYELKIEARDTR--DRSAMVELIIIVVNINDNKPTFVDIVD--GQIDRKAIGTCSPTDIAEGEVITRLGAFDRDGDE---ITFIVPDDVKDLFKIDSRGVVTAKKPIEDLPKIYPFNV--KALDNGEPPQETDVKVRLVFVH 1728 HSP 5 Score: 105.916 bits (263), Expect = 8.537e-23 Identity = 167/681 (24.52%), Postives = 278/681 (40.82%), Query Frame = 1 Query: 370 IMAKDKSSDQSES------INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRL-------PSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFII-TENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF---TGEPNDYFTI--DPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILT-VKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQAT---DPDYGENSNVTYSVMNNNKLLFILNQVTGELRVA----RLLPIGQFQLFLRASDNGRP 2328 I A+D SS Q ES + ++V D NDN P F+ K +V + P G + +A DAD+ S ++ + G F LD S + + L K L EV ++ ++ K +I +L N+ P FSQQ Y I EN G + + A S +I Y E D N R + + G I + + Y + A DK + + + + I + D+ND SP + E P P ++ +++ DDD G + + +F++DA I + +++ D E + E+ D N L + V D N+ P F + + E+ G ++L + A+D D K ++ G+P F+I P G++ +LD E + + TD + T TV I+ D ND PP F I EN + V + A+D D I+ + + + F R S P G+I T K+LDRE + + A D +A + + D NDN P + P S + G + N P G ++ +QA DP G N+ ++Y + ++ F ++ ++G ++ R +F++ ++A+D G P Sbjct: 2322 IKAEDGSSKQDESERLLWYCYLTINVEDVNDNRPYFLAAKYFGSVFSSAPNGSNILTVQATDADSGSNAKIKYALLDSAGGLFRLDSSGILRTNTNPARLQLETGKKLLLEVSAKDVESIAGTQPGKPTK-YTTQIEILVSNEEPPKFSQQVYTASINENMETGSTVTRITAT---SSTGAEISY---ENVDTNPRAKILFRVQPDGYIITGDRPDYERGTTYNMQFAAKDKKTLLY--STVKVVINIIDVNDVSPAFLLAINTRNARVLENKPAPTKVISMKAIDDD-GSEPHRRVTYEMKDNPNFQIDASTGMITTKTTL---DREVTPKYDVEVTAKDG---VNKESAILYITVVDQNDQPPVFAPKSYAISVPEDSPIGTSVLDIYATDADVGENAKITYFISKGDPEGKFSIVTSPVKGELVVN-GKLDFETKSSYTLEVTATDG-KFSDTAVVTVTIQ--DVNDLPPVFSSPLYESRIQENTGPGAGVV-MVTASDIDSPTISFSLDDRGKDYFQITPIRASGP--GNVWVGDIRTGSKQLDREESPVKVFTVIANDG---KHTAQAEIRVNLTDVNDNAPRF--PASPYIGY----VEENKPSGTSVMYIQAVDDDDPLAGGNAKLSYELTDSAGDKFSIDPLSGLIKTKVTFDREQTPNKFKVRVKATDAGNP 2970 HSP 6 Score: 103.219 bits (256), Expect = 4.541e-22 Identity = 106/397 (26.70%), Postives = 172/397 (43.32%), Query Frame = 1 Query: 718 NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL--SGNSK---------IEINETDPPR-ELFTLQVTDDD-IGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENE---REIKAEIECYDHGSPRNVAHKSLNVHVKDINEF--APRFEKDFQKLKLLENREQGHNILQVSASDRDG-------SAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDE 1830 T + ++V D ND P F +Y+ I EN P+ ++ V A DKD D N IY + + N + + F I TG I++ K L R K+ + A D+ A A + I +++ P S N+K I E PP+ L ++ D+D IG N + L ++ F +D E ++ S DYEN + D G A L + ++D++E +PRF+ L++ EN +Q + VSA+D D + YS G F +D +TG++K + LDRE + + + +D P++ + ++I +LDE+DN P F + + EN S + V +D DE Sbjct: 232 GTANIRVNVEDANDQTPVFESSQYRETIAENTPIQTSVLRVRATDKD-DGTNGGIYYYMK---NPVNSYFTIDAITGVIRVAKTLDYNARDKHTLYISARDRGDPPRTSAEATVEISLRENIQGWPLPDSADPKENTKPYFPQSRYTFSIREDFPPKGALLVMRAADNDPIGPNKRLRYSLSGNGVSKFAIDP---ESGVVTLTDSVDYENTPNNHVYDLTVTATDQGPGSLSATTQLLIEIQDVDENKNSPRFDPQQAILEISENLKQNSLVTTVSATDSDSVGNPSSPDGKVVYSIVGGTGLGVFRVDSNTGEVKVAVPSLDREGTSQYTLVVKASDNATFPRSSRLFLMINLLDEDDNFPYFSQPIYIAQVPENQPSGTFV---TVVVGRDADE 618 HSP 7 Score: 93.9745 bits (232), Expect = 3.170e-19 Identity = 152/670 (22.69%), Postives = 283/670 (42.24%), Query Frame = 1 Query: 415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDAD-ATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQA---LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAI--DKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVK--DLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND---FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQ----CTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLP-MLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFI 2358 + V+V D ND+ P+F++ ++V + P G L +A D D T+A ++ + +E + F L+ + S + + Y++ + A D+ + + A + + V +++ F + Y + E+ + +A S + +++ G+ ++ + F I +TG + L KKL + + + V A K + + + + KV D+NDN P+ + +SK + ++ ++ + D D G V+ + F ++ I++ I + I + GS + + ++NV V D P F + + E G + V A +A LKY+F +G ++ F ++ I S + LDRE V + + VT GQ TV + + D ND+ P F +I E L+ +++ + A D D N K+L+ + + F + + +G+I T LD E + ++T+ IRA D G P LS I V D+NDN P + + I+ + G ++++ ATD D G+N +TYS++ N + F +N+ G + V + L +F L + A D PR ++ I Sbjct: 887 VEVNVIDVNDHKPEFLQESYWLSVPSSTPAGSSLVTVQAEDMDIGTNAQVRYELLRQENSERFILNDNNQLSTASTLTPNVRYQL------LIRASDSATRNPSSAQVPVYVSVYSPSESPIVFDKSSYNQNLPEDSSANTLVFTAKATRSGSSSGITYELVGGYKQIGEA----MFSIKPDTGQVYLIKKLDFETKSYFPIAVRA--KYSGGAIELASEVVAKVTIVDVNDNGPRF-AFHESSKTVVIDSFSAKDTQLARALDADSGSLGEVTYGIDGGRSTSNLPFNINVKTGMIFATREILYTQGSSYIIIVVATDGATDGS-QKIQKFTVNVQVLDTPR-PPSFPQKTYSAPVTETAGVGDTVTTVRAVYSKPNAFLKYTFVSGNEDNTFCVNGF--GIISVAKSLDREKVAGYTLGMRVT-------LGQHVDDTTVYVNLTDINDDAPHFTSAIYRRSIKEGLAEDTEILPPVIAVDHDFGS-NGKILYSILSGVHPDWDKY----FNIDSATGKITTKMTLDYETHKSHTLFIRAEDNGSPKRLSGIAQVDIDVIDRNDNSPVFA------AAFYRAKISLGAVKGTSVLQVHATDLDSGQNGQITYSIIQGNEEEAFTINE-QGVILVDKSLTTVAADKFSLKVEARDKNASPRSGSVTVEI 1520 HSP 8 Score: 91.2781 bits (225), Expect = 1.944e-18 Identity = 130/522 (24.90%), Postives = 226/522 (43.30%), Query Frame = 1 Query: 235 YFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDAD--ATSANRVHQYIFKEPTG-TFNLDQSRLPSIGLI-VKKPLDYEVKSQYFAT-LEACDTNKQCNTQALE--IHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADK-MAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRS---FDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG---SAVLKYS-FTGEPNDYFTIDPHTGQIKS------GIRRLDREMVERIEINIIVTDAI-ENPKTGQCTVIIEVLDENDNPP 1728 YF +P ++ S G++ + D+ T Q + EE + T I K + Q+E I V+++D NDN P+F V EN+P G + +A+D D N Y + G F++D P GLI K D E F ++A D + +++ IHV D ND+ P F+++ Y+ + EN P G ++ V A D+D + + F + N+ + F I G++ + L + +++Y + AD+ M A + I++ D NDN+P+ N+ + + + + + T+ D D G N N + + + D F ++ N S+ IR+ D E ++ D G + + ++V D+N+ P F F ++ E + ++ A D D V+ +S + G + F +DP + +S G+ DRE +I I D + P+ V ++VLD NDN P Sbjct: 2819 YFQITP-IRASGPGNVWVG---DIRTGSKQLDR--EESPVKVFTVIANDGKHTAQAE---IRVNLTDVNDNAPRFPASPYIGYVEENKPSGTSVMYIQAVDDDDPLAGGNAKLSYELTDSAGDKFSID----PLSGLIKTKVTFDREQTPNKFKVRVKATDAGNPRLSASVDGIIHVSDANDHKPKFTEKFYRGSVAENAPPGYSVLRVTATDED--VGPNAEFEFVVVQGND-PHAFYIDPFNGTVLVSGILDYEKKKEYTITLTVADRGMPPLQGDETAYVVIEILDANDNAPEFIPKIYNASV-LEDVGARQPVLTVTAVDKDSGPNGNFTFAIDPRSDPDDAFTIEPNPNNA-SIGIIRTRVPLDQEKTPSFHLKVTATDAGGLQ--GEGEVRINVIDVNDNGPWFVPPFFVGQIKEGVSARQFVTKLKAYDPDAFVKDQVITFSIYNGTVGENFKLDPVSVTNESVDLHSYGV--FDREAAPVWKIGIEAVDNVGPKPQKNFTYVYVDVLDVNDNAP 3318 HSP 9 Score: 88.1965 bits (217), Expect = 1.879e-17 Identity = 115/489 (23.52%), Postives = 204/489 (41.72%), Query Frame = 1 Query: 355 ILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQA---LEIHVLD-------------QNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKL---SAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDL--NDNSPKITSLSGNSKIEINETDPPRELF-TLQVTD-DDIGVNANVSCQLLQQYIND-----FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTF 1734 I+ T + + S + NI V+V D ND P F + +AEN PI + RA D D + ++ Y+ F +D G+I V K LDY + ++ + A D T A +EI + + + + P F Q Y I E+FP ++ + A D D NK + + LS N + + F I +G + L + + Y V A D+ + A + I+++D+ N NSP+ + +EI+E L T+ TD D +G ++ +++ + FR+D+ E+ ++ S D E + ++ D+ + + L +++ D ++ P F + ++ EN+ G + V D D Y+ P + I+P TG I++ + LD+ + E+ +IV + KT V I V+ + + PP F Sbjct: 216 IMLTVQVTDGGNPSHSGTANIRVNVEDANDQTPVFESSQYRETIAENTPIQTSVLRVRATDKDDGTNGGIYYYMKNPVNSYFTIDA----ITGVIRVAKTLDYNARDKHTLYISARDRGDPPRTSAEATVEISLRENIQGWPLPDSADPKENTKPYFPQSRYTFSIREDFPPKGALLVMRAADNDPIGPNKRLR--YSLSGNGV-SKFAIDPESGVVTLTDSVDYENTPNNHVYDLTVTATDQGPGSL-SATTQLLIEIQDVDENKNSPRFDPQ--QAILEISENLKQNSLVTTVSATDSDSVGNPSSPDGKVVYSIVGGTGLGVFRVDSNTGEVK--VAVPSLDREGTSQYTLVVKASDNATFPRSSRLFLMINLLDEDDNFPYFSQPIYIAQVPENQPSGTFVTVVVGRDADEGFNPSYTVI-TPGVPYKIEPSTGVIRTS-KSLDQSELSTRELQVIVRVSTAGSKTADGQVNITVISKVNRPPVF 690 HSP 10 Score: 83.5741 bits (205), Expect = 4.219e-16 Identity = 185/774 (23.90%), Postives = 320/774 (41.34%), Query Frame = 1 Query: 106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG--------------TFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFP----VGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQ-KYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSC---------QLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPM-----LSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRV----ARL-LPIGQFQLFLRAS 2313 + L ++ Y+ + V + E++P VI + P+ + + + GD++L + +D E+ H M E + +Q+ +++ V V D NDN P +++ ++ V N G +Y A D D S+ V Y K P+ T N ++ G + + D +V + + N L P FS+ Y + E+ VG II +I + L KI+ G N+ + FI + G I L L + Q +Y KV A +++ V ++ I V + ND+ P ++I E+ L +VT D ++ +C + ++ F +D +I S + DYE++R ++ D G +NV + ++N+ P F K + ++ E G ++ V A D DG AV YS G F++D TG I LD + + ++ D+ T +V V D N+N P F + G +I EN +K+ ++ ATD D+ + N ++ + ++ SQ EP +G + ++ LDRE +Y I+A D L + TI VED NDN P ++ + + G ++ +++P G I+ +QATD D G N+ + Y+++++ LF L+ +G LR ARL L G+ +L L S Sbjct: 1722 VRLVFVHYRPDQKHVRVNVREDTPTGSVIATVRRYFPNGIVSLLLPEKANFSVRANGDVILLTPLDYES-QQFHRMTVRE-------------ELGNQTNDVDVEVVVLDVNDNRPIWMERERLARVNTNSRAGAQVYQLEARDEDDGSSGLVG-YQLKSPSNDAKRKRRSPPQHPFTINPKTRQMEVAGSLKDQRYDLDVFAFDYGIPRLTSDTITLNVDGSAAGQLP-----PRFSKVSYHFMVSEDAKYLSLVG--IILARSI-SGARLDYKIVSG-------NVGDKFIAMGD-GRILLNSLLDFERDQTQYNLKVKATEQIPDGLDSTV-DVKIDVINANDHFPYFDQQL--YSVQIPESTAVGVLVQ-EVTAKDCDCLSSCTCSPGFLTYSIEPSKEQGGKFYIDPATGKI---SVSVALDYEDQRYHLLKVYATDKGKKSFQGLCFVNVTLTNVNDNRPTFLKSAYEFRVAEGAATGESLAIVVAVDADGDAV-TYSKAGGALQ-FSVDQSTGVITLN-SALDPNK-NQYTLQVMAKDS--GGLTSTVSVTFNVADANNNVPQFTN-CGTVSIRENDPRDTKIT-QLTATDADRGQ-NGQITYSIEDA-SSQTLFSIEP-----RTGVVRSLTSLDRENKDSYNAIIKAEDGSSKQDESERLLWYCYLTINVEDVNDNRPYFLA--AKYFG----SVFSSAPNGSNILTVQATDADSGSNAKIKYALLDSAGGLFRLDS-SGILRTNTNPARLQLETGK-KLLLEVS 2434 HSP 11 Score: 83.1889 bits (204), Expect = 6.652e-16 Identity = 112/461 (24.30%), Postives = 190/461 (41.21%), Query Frame = 1 Query: 1039 HKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSP-RNVAHKSLNVHVKD-INEFA------------PRFEKDFQKLKLLENREQGHNILQVSASDRDG---SAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEI-NIIVTDAIENP----KTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDK----DEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEI-LTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARL-----LPIGQFQLFLRASDNG 2322 H ANI + V+D ND +P S I N T + ++ TD D G N + + + F +DA+ I ++ DY + I D G P R A ++ + +++ I + P F + + E+ +L + A+D D + L+YS +G F IDP +G + + +D E + ++ VT + P T Q + I+ +DEN N P F + ISENL S V ++ATD D + KV++ + +F+V + +GE+ + V LDRE YT+ ++A D S+ I + D++DN P + P I+ + N P G + + D D E N +Y+V+ + + + TG +R ++ L + Q+ +R S G Sbjct: 230 HSGTANIRVNVEDANDQTPVFESSQYRETIAEN-TPIQTSVLRVRATDKDDGTNGGIYYYMKNPVNSYFTIDAITGVI---RVAKTLDYNARDKHTLYISARDRGDPPRTSAEATVEISLRENIQGWPLPDSADPKENTKPYFPQSRYTFSIREDFPPKGALLVMRAADNDPIGPNKRLRYSLSGNGVSKFAIDPESGVV-TLTDSVDYENTPNNHVYDLTVTATDQGPGSLSATTQLLIEIQDVDENKNSPRFDPQQAILEISENLKQNSLVT-TVSATDSDSVGNPSSPDGKVVYSIVGG-------TGLGVFRVDSNTGEVKVAVPSLDREGTSQYTLVVKASDNATFPRSSRLFLMINLLDEDDNFPYFSQP------IYIAQVPENQPSGTFVTVVVGRDAD--EGFNPSYTVITPG-VPYKIEPSTGVIRTSKSLDQSELSTRELQVIVRVSTAG 668 HSP 12 Score: 82.4185 bits (202), Expect = 1.005e-15 Identity = 133/590 (22.54%), Postives = 242/590 (41.02%), Query Frame = 1 Query: 652 LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSS-------IRSFDYENEREIKAEIEC-YDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMV----ERIEINIIVTDAIEN--PKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAH-KNFTIYV--EDQNDNDPDWVTPL---SSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN----NNKLLFILNQVTGELRVARLLPIGQFQ---LFLRASDNGRPPR 2334 LD + S+Y + A D N T +E++V+D ND+ P F Q+ Y + + + P G ++ V+A D D ++ Y EL FI+ +N + L+ VR Y+ + A+D A +++ V ++ SP + S ++ ++ +FT + T G ++ ++ +L+ Y +G ++S+ I+ D+E + + Y G+ + V + D+N+ PRF ++ + + A D D ++ + ++ + + P +K+G+ RE++ I ++ TD + K + TV ++VLD PP+F + ++E + T + +K L++TF S N + F V G I K LDRE YT+ +R L H + T+YV D ND+ P + + + S G+ T PP + A D D+G N + YS+++ + F ++ TG++ L + LF+RA DNG P R Sbjct: 859 LDAHLASKYTFNVRATDRNFRNMFATAQVEVNVIDVNDHKPEFLQESYWLSVPSSTPAGSSLVTVQAEDMDIGTNAQVRY---ELLRQENSERFILNDNN-QLSTASTLTPNVR--YQLLIRASDSATRNPSSAQVPVYVSVYSPSE-SPIVFDKSSYNQNLPEDSSANTLVFTAKATRS--GSSSGITYELVGGY------KQIGEAMFSIKPDTGQVYLIKKLDFETKSYFPIAVRAKYSGGAIELASEVVAKVTIVDVNDNGPRFAFHESSKTVVIDSFSAKDTQLARALDADSGSLGEVTYGIDGGRSTSNLPFNINVKTGMIFATREILYTQGSSYIIIVVATDGATDGSQKIQKFTVNVQVLD-TPRPPSFPQKTYSAPVTETAG--------VGDTVTTVRAVYSKPNAFLKYTFVSGNE---DNTFCVNGFGIISVAKSLDREKVAGYTLGMRV------TLGQHVDDTTVYVNLTDINDDAPHFTSAIYRRSIKEGL--AEDTEILPP------VIAVDHDFGSNGKILYSILSGVHPDWDKYFNIDSATGKITTKMTLDYETHKSHTLFIRAEDNGSPKR 1407 HSP 13 Score: 77.411 bits (189), Expect = 4.103e-14 Identity = 126/493 (25.56%), Postives = 207/493 (41.99%), Query Frame = 1 Query: 322 QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQ-CNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQII-AVEAIDKD--SDLFN---KIIYGFHELSDNNIRNTFIITENTG----SIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVK--DINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGE----PNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVT---DAIENPKTGQCTVIIEVLDENDNPPTF 1734 Q E+ E++ I++ + A K++D ++++V K + P F +V V E L+ A+D S +R QY G F +D+ S L K +YE +Y +EA ++ Q + +L + V ++ D P FS YQ+ + E+ G + + ID D SD F+ + I H L + F +T+ +G ++ KL A + KY F V A D+ A A + + V D+ND+ P+ L + + + + P L T+Q D DIG NA V +LL+Q N R N S +S + + + I+A + RN + + V+V +E F+K L E+ + A+ S+ + Y G F+I P TGQ+ I++LD E I + AIE + + ++D NDN P F Sbjct: 650 QSELSTRELQVIVRVS-TAGSKTADG----QVNITVISKVNRPPVFKNTPYSVKVPEEMGPLPNLFCIAAVD----SLSRPVQYTLAPGADGLFEVDKD---SGRLHTKNSFNYENVDRYNLRIEARTSSVQEVASASLTVEVTEEKD-LPKFSSDSYQLTVDESAAPGTTLAPGLLIIDSDTSSDQFDCSMEAITSLHTLYN------FEVTQQSGRCFLRVQAGGKLDAHLASKYTFNVRATDRNFRNMF-ATAQVEVNVIDVNDHKPEF--LQESYWLSVPSSTPAGSSLVTVQAEDMDIGTNAQVRYELLRQE-NSERFILNDNNQLSTASTLTPNVRYQLLIRAS-----DSATRNPSSAQVPVYVSVYSPSESPIVFDKSSYNQNLPEDSSANTLVFTAKATRSGSSSGITYELVGGYKQIGEAMFSIKPDTGQVYL-IKKLDFETKSYFPIAVRAKYSGGAIE--LASEVVAKVTIVDVNDNGPRF 1111 HSP 14 Score: 57.3806 bits (137), Expect = 4.174e-8 Identity = 41/138 (29.71%), Postives = 66/138 (47.83%), Query Frame = 1 Query: 1933 TVKKLDREINHNY-TVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIG---QFQLFLRASDNGRPPR 2334 T K + R+ N+ Y + ++ D G P S N + VED ND P + + I N+P +++++ATD D G N + Y + N F ++ +TG +RVA+ L + L++ A D G PPR Sbjct: 203 TGKPIVRDDNNPYIMLTVQVTDGGNPSHSGTANIRVNVEDANDQTPVF------ESSQYRETIAENTPIQTSVLRVRATDKDDGTNGGIYYYMKNPVNSYFTIDAITGVIRVAKTLDYNARDKHTLYISARDRGDPPR 334 HSP 15 Score: 51.6026 bits (122), Expect = 2.859e-6 Identity = 55/243 (22.63%), Postives = 104/243 (42.80%), Query Frame = 1 Query: 403 ESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYI--FKEPTGTFNLDQS-RLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKII-YGFH--ELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL 1110 E+ + + + D NDN P+F+ +V E+ + A+D D+ I +P F ++ + SIG+I + PLD E + + A D + I+V+D NDN P F + +I E Q + ++A D D+ + +++I + + + +N + +T + + + +K + A D + K +++ V D+NDN+PK SL Sbjct: 3081 ETAYVVIEILDANDNAPEFIPKIYNASVLEDVGARQPVLTVTAVDKDSGPNGNFTFAIDPRSDPDDAFTIEPNPNNASIGIIRTRVPLDQEKTPSFHLKVTATDAGGLQGEGEVRINVIDVNDNGPWFVPPFFVGQIKEGVSARQFVTKLKAYDPDAFVKDQVITFSIYNGTVGENFKLDPVSVTNESVDLHSYGVFDREAAPVWKIGIEAVDNVGPKPQKNFTYVYVDVLDVNDNAPKDGSL 3323
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 254.218 bits (648), Expect = 1.094e-69 Identity = 238/781 (30.47%), Postives = 364/781 (46.61%), Query Frame = 1 Query: 145 TVTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIF---KEPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACDT-NKQCNTQAL-EIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSK--IEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEI------YSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 ++ +++ EE P + +IG++ H + + + +P+L++ K GD+ + ID ET+ + + C L+ + D + S I + V D NDN P+F T++V EN +G + A D D + N V Y + F L + +LP LIV LD E+K Y T++A D N Q +QAL + V D NDN P F Y+ E+ EN PVG ++ V+A D D +I Y H+ D + I TG I ++ L + F V A DK + + I+V D NDN+P + L +S+ I+E P L QV+D D G NA V+C + F+L + Y L + DYE +E + EI D G+P + SL V V D+N+ +P F ++ E + G IL V+A+D D A L Y+ G+ F IDP+TG++K+ LDRE ER E + D G TV+I+VLD NDN P F+ F++ EN+ S V G + D DK E N V ++ F QN +G IL+ DRE +YT ++A D G P S++ TI V D+NDNDP P S+ ++ A SP ++ + ++A D D G N+++ +S+ N LF ++ +GE+ +A+ + G +L +R SD G+PPRH + I++N Sbjct: 23 SILYRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGAPYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGK-PCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRD-SERNGVADYALTAGPDAATLFGLQVADDRGGKLPQ--LIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDP-VPKLLRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQP-KSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDV--PFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKART-PLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPV-GMVTVLDMDKGE-NAHVHLSVEPDGGKFVVQNG-----------TGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKP--SNSSFRQLSPVA-SPDSHVDV-VEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVN 777
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 256.144 bits (653), Expect = 1.765e-69 Identity = 238/781 (30.47%), Postives = 363/781 (46.48%), Query Frame = 1 Query: 145 TVTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIF---KEPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDT-NKQCNTQAL-EIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSK--IEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEI------YSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367 ++ +++ EE P + +IG++ H + + + +P+L++ K GD+ + ID ET+ + + C L+ + D + S I + V D NDN P+F T++V EN +G + A D D + N V Y + F L +LP LIV LD E+K Y T++A D N Q +QAL + V D NDN P F Y+ E+ EN PVG ++ V+A D D +I Y H+ D + I TG I ++ L + F V A DK + + I+V D NDN+P + L +S+ I+E P L QV+D D G NA V+C + F+L + Y L + DYE +E + EI D G+P + SL V V D+N+ +P F ++ E + G IL V+A+D D A L Y+ G+ F IDP+TG++K+ LDRE ER E + D G TV+I+VLD NDN P F+ F++ EN+ S V G + D DK E N V ++ F QN +G IL+ DRE +YT ++A D G P S++ TI V D+NDNDP P S+ ++ A SP ++ + ++A D D G N+++ +S+ N LF ++ +GE+ +A+ + G +L +R SD G+PPRH + I++N Sbjct: 100 SILYRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGAPYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGK-PCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRD-SERNGVADYALTAGPDAATLFGLQVADDRGGKLPQ--LIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDP-VPKLLRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQP-KSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDV--PFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKART-PLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPV-GMVTVLDMDKGE-NAHVHLSVEPDGGKFVVQN-----------GTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKP--SNSSFRQLSPVA-SPDSHVDV-VEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVN 854
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755]) HSP 1 Score: 251.906 bits (642), Expect = 8.793e-69 Identity = 234/801 (29.21%), Postives = 368/801 (45.94%), Query Frame = 1 Query: 100 CIIFLFYLCYQGSCQTV----TFKIMEESPIDMVIGNI---VHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRI--DLETI--CA---QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI------TSLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEI------YSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIR-RLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFIN 2367 C++ L + C V +K+ EE P + +IG++ + L S + + SP+L++ K + ++ I D ET+ C + + C E E + + E I + V D NDN P+F P T+++ EN G + A+D D+ S N V +Y + F L + ++P + IV LD E K Y + D K + ++ L I V DQNDN P F + +Y+ E+ EN P G ++ V A D D+ I Y H+ SD ++ I +TG I ++ + + KF V A D+ + + A + I +KD NDN+P I + N I+E P L QV+D D G NA V+C + F+L Y L + DYE ++ + EI D G+P + SL V V DIN+ P F ++ E+ + G ++ V A+D D A L YS F I+ +TG+I+ +R +LDRE VER E + D KTG V+I V D NDN P F+ F+++EN+ + V G + +D DK E + LF + N + I + +G IL+ DRE YT ++A D G P S++ TI V D+NDN P P +S ++ +SPP + ++A D D G N+ + Y++ N LF ++ +GE+++A+ G +L +R SD G+PPRH + +++N Sbjct: 22 CLVLL-TIVLMVPCGAVPSNNIYKLSEEQPPNTLIGSLAADLGLPDSGHLYKLEVGSPYLRVDSKTGEIYTTEIPIDRETLSDCRNLFEDDKCFLEFEVSITDMVKGIGLGPRLIEGI---IEVLDINDNTPQFSSPILTLSIPENTHTGTLFSIPVAVDRDSGS-NGVAEYALSAGPDANQLFGLQVAEDVDEKIPQV--IVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVRANDADTGANGDIDYSLHQASD-TVQRLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRGPNS-KSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDV--PFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIR--VRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPV-GVVTVSDADKGENSQVTLF-----VEPDNGKF---IIQ-NGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANS----SYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTALVHVYVN 795
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755]) HSP 1 Score: 252.292 bits (643), Expect = 2.538e-68 Identity = 234/801 (29.21%), Postives = 368/801 (45.94%), Query Frame = 1 Query: 100 CIIFLFYLCYQGSCQTVT----FKIMEESPIDMVIGNI---VHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRI--DLETI--CA---QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKIT------SLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEI------YSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIR-RLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFIN 2367 C++ L + C V +K+ EE P + +IG++ + L S + + SP+L++ K + ++ I D ET+ C + + C E E + + E I + V D NDN P+F P T+++ EN G + A+D D+ S N V +Y + F L + ++P + IV LD E K Y + D K + ++ L I V DQNDN P F + +Y+ E+ EN P G ++ V A D D+ I Y H+ SD ++ I +TG I ++ + + KF V A D+ + + A + I +KD NDN+P I + N I+E P L QV+D D G NA V+C + F+L Y L + DYE ++ + EI D G+P + SL V V DIN+ P F ++ E+ + G ++ V A+D D A L YS F I+ +TG+I+ +R +LDRE VER E + D KTG V+I V D NDN P F+ F+++EN+ + V G + +D DK E + LF + N + I + +G IL+ DRE YT ++A D G P S++ TI V D+NDN P P +S ++ +SPP + ++A D D G N+ + Y++ N LF ++ +GE+++A+ G +L +R SD G+PPRH + +++N Sbjct: 22 CLVLL-TIVLMVPCGAVPSNNIYKLSEEQPPNTLIGSLAADLGLPDSGHLYKLEVGSPYLRVDSKTGEIYTTEIPIDRETLSDCRNLFEDDKCFLEFEVSITDMVKGIGLGPRLIEGI---IEVLDINDNTPQFSSPILTLSIPENTHTGTLFSIPVAVDRDSGS-NGVAEYALSAGPDANQLFGLQVAEDVDEKIPQV--IVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVRANDADTGANGDIDYSLHQASD-TVQRLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRGPNS-KSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDV--PFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIR--VRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPV-GVVTVSDADKGENSQVTLF-----VEPDNGKF---IIQ-NGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANS----SYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTALVHVYVN 795
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238]) HSP 1 Score: 248.44 bits (633), Expect = 1.168e-67 Identity = 232/794 (29.22%), Postives = 363/794 (45.72%), Query Frame = 1 Query: 94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367 DF ++ C Q + + I EE +++IGNI H + ++ + SP ++ L + G++ +S RID E +C E+ EC + ++ +D I I + V D NDN P F P +++ EN I + A D D T N VH+Y F LD P LIV++ LD E K Y ++ D + ++ +T L++ V D NDN P F + + ++ I EN P+G ++ ++A D D +I Y F + F + +G I +Q+ L + +K V A+D + A A + I V D+NDN P I N + ++E DP ++ + V+D D +N V C + + F L AV + Y L + DYE +E +I D G P + V ++D N+ P F + +L ++EN ++ + +SA+D D + + PN +F +D TG + + R DRE +R + D P Q VI+ VLDENDN P F F +SENL YS V G I TD D E L D++N I +P SG I + DRE +YT ++RA D+G P S+ TI V D NDN P + P S+ V ++ S PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + + + P IG +L + SD G P H +F+++N Sbjct: 5 DFYLLGSLLACIWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTSAATGASANLVYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSF--EDAECSFEIEVVVL--PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSS---SPARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTV-GVITVTDSDAGE---NAAISLSILNDNEN-FILDPF-----SGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLS--SIPGSVVAEVFAVDSDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVN 774
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000033639.1 (SMESG000033639.1) HSP 1 Score: 2148.24 bits (5565), Expect = 0.000e+0 Identity = 1079/1080 (99.91%), Postives = 1080/1080 (100.00%), Query Frame = 1 Query: 85 MKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMXXXXXXXXXXXXXXXNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV 3324 MKIDFCIIFLFYLC+QGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMSIIIVLIGITGFISIFLIIAIICVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMDDDSADSGKGGSEDDNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV Sbjct: 1 MKIDFCIIFLFYLCHQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMSIIIVLIGITGFISIFLIIAIICVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMDDDSADSGKGGSEDDNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV 1080
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000033639.1 (SMESG000033639.1) HSP 1 Score: 2093.93 bits (5424), Expect = 0.000e+0 Identity = 1054/1054 (100.00%), Postives = 1054/1054 (100.00%), Query Frame = 1 Query: 163 MEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMXXXXXXXXXXXXXXXNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV 3324 MEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMSIIIVLIGITGFISIFLIIAIICVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMDDDSADSGKGGSEDDNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV Sbjct: 1 MEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMSIIIVLIGITGFISIFLIIAIICVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMDDDSADSGKGGSEDDNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV 1054
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000079318.1 (SMESG000079318.1) HSP 1 Score: 473.396 bits (1217), Expect = 1.417e-147 Identity = 321/887 (36.19%), Postives = 484/887 (54.57%), Query Frame = 1 Query: 97 FCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKAS---YFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKL--KLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG----LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVM-------------NNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSY-YPSGN---FLSDNTSVLYFPNEIDSSVPMNTFV 2679 FC+ +F L ++ ++ EE P + IG+I+ P +++ + +S F ++++G +++ IDLET+C+Q+++CC E CILK I+ +K + S+ I V + DKND+ P F P+ + ++E IG + L A D D +S R+ Y EPT +F LD S+LPSI L V K LD+E K QY A L+ACD + C TQ L IH+ D+NDN P F + Y + I E+ +G I V+A D+DS LF I Y D +I++TF + +G IKL+KKLS R +Y F++ A D + +++ ++ I V+D+ND+ P+I ++ S ++I E P + + TLQ+ D D G N V C L F L +IYSL S+R FD+E E++I A + C D G P + K + + + D+NEF P F+ Q L + EN E G ++ V A D+D SAVLKY +YF ID ++G I+ +DRE V I + V D+ PKT V I VLD NDN P F F+I EN + S++ G+I ATD D+DE N + F L+++++ + + F V +G I T+ KLDREI Y +EI A D+ +P+ S N T+ V D+ND P W +H + +NIT PG +++LQATD D G N V + ++ + FI+N TG L ++++L G L RASD G+P ++++ L I I GDE LNM+II V+I +T IS+FLI+AIICVRR+P ++ T +P V G ++DE YPSGN +++++ + P D ++PM T+ Sbjct: 8 FCVNTVFALS-----DKISIQMHEEIPPNSEIGSILSAIPHNLRSTSLEFITESDFFIVTEEGKILVRKLIDLETLCSQYKLCCGEPVCILKANILLNNKEKEVVSSVEIQVQILDKNDHNPIFETPETKIVISEFSQIGISISLTSATDKDHSSQYRIQNYKLDEPTNSFILDISQLPSIFLKVSKKLDFEEKKQYHAKLKACDED-NCTTQNLIIHIKDENDNQPIFETETYNLTIKEDVQIGSIIGQVKANDRDSGLFGTIKYSIRTDFDTDIQSTFYVETLSGRIKLKKKLSTFTRSRYPFRIVARDSDPINPKQSLCSVTILVEDVNDHKPEIRIIADLSSLKIQEEIPSKLITTLQIVDQDKGPNGIVYCHLDPVCEGSFELQNRSKDIYSLRSVRKFDHEVEQKIDAIVICKDQGEPSLESRKIIPIIITDLNEFRPTFKDKSQYLLGHVWENSEFGTKVMTVKAQDQDKSAVLKYQIDNYGAEYFEIDQNSGLIRCTNNLIDRERVSSISFTVHVMDSDTEPKTASVEVKITVLDANDNSPLFSTNLPQFSIIEN-TGPSQLVGQINATDADQDE-NALISFSLRNSWNGNTMQRHDNYFNVLPTGHIETLLKLDREICDLYILEIMASDSAKSPQIPLTSI-VNITLRVLDENDESPTW-----THPDNNILNITDTMRPGDHLLQLQATDRDVGANGKVRFEIIKQYRKEDGSSSFNQGSSQYFIVNSSTGALWISQMLHSGTVILLFRASDYGQPAKYSDHKLVINIFGDESGNLNMTIIAVMITVTAVISLFLIVAIICVRRKPPKYHSPTSSILTKEQP-------VPDWIGLNSDESLLAYPSGNKSPYITNSHRASFIPPMNDGTIPMRTYA 873
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000051413.1 (SMESG000051413.1) HSP 1 Score: 465.307 bits (1196), Expect = 1.699e-145 Identity = 280/798 (35.09%), Postives = 458/798 (57.39%), Query Frame = 1 Query: 73 KLLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKA-----SYFIKSPFLKLSDK-GDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNL--DQSRLPSIGLIVKKPLDYEVKSQYFATLEACD-TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNS----KIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTP--LSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-----NNKLLFILNQVTGELRVARL-LPIGQFQLFLRASDNGRPPRHNETSLFIFI---NGDEVATLNM 2394 K LE KI + YL S Q +TF ++EE+ +++GN+ + S K + + S + ++ ++ ++ + S IDL+TIC+ CC++ +C+++T ++ ++ S +S S ++ V V D +DN+P F+ KQ + ++E I + +D A+D D + N+ Y F + + TF L Q + ++V + L+YE+K YF L+ CD T + C +++ + V+D+NDN P F +++Y ++I E++P+G++I+ V A D DS LFNK YGF S+ N+++ F I + +G I L++ LS + +Y F V+A D +++ F K A++ I+++D+NDN P I+ L G I I+E PP+ LF++ V+D D G+NA V+C L + + + EIY + +IRSFDYE + I+AEI C D GSP ++ K++ + + D+NEF P +F++L EN + I+ + ASD+D A+L+YS YFTI+ TG+I LD+EM + ++ + +TD++ NP T V + +LD+NDN P F+ + F I E LS YSK+ RI A D DKDEIN+ ++F+L HT++++ + E IF V+ GEI TV +DRE + NYT+ I A D G P S N TI V D NDN P WV+P L+S NI+ + G ++ +L+A D D + ++Y +M+ + LN+ +G L + + L G+ L + A D+G PP N +L I + N + + LNM Sbjct: 3 KELEGKIILFHLLCGYLPSIISSQEITFHLVEENKRGLILGNLNYFITSKLKTDPRITEFHVSSKYFEIDNQTKNVQMVSTIDLDTICSTDSECCDKEKCVIETKVVVQEYSQYKS-SFSLKVEVKDLDDNFPLFLDDKQIIKLSEKISINTSISIDGAMDKDFSKINQKKNYQFFDESMTFQLFVYQYDPDILSIMVMRSLNYELKQIYFCKLKVCDKTYQNCVRKSIIVQVIDENDNEPIFVEKKYLVKIPESYPIGKKILKVTAKDADSSLFNKTFYGFQ--SNYNVKSIFNIEKESGVISLKQSLSINKKSRYLFTVYAIDALSVTFKKDYADVEIEIEDVNDNYPIISLLHGYMPDPYAIRIDENTPPKTLFSIHVSDKDTGINAVVNCSLRVRRKDLLEMIKADMEIYQIRTIRSFDYEILQLIEAEILCIDSGSPALLSRKAIKIIIVDVNEFEPSIRNNFEELSFKENIPEHKFIMSIDASDKDKGAILRYSLDEIGRIYFTINSRTGEIIMSNVTLDKEMNDSVKFKVFITDSLINPHTATMFVTVTILDQNDNAPQFVH-TLPFTIQEGLSFYSKLSTRIEAKDADKDEINHSIIFRLLHTYNNKMELLHEKIFDVSSKGEIETVVTIDREKDSNYTLTILAQDKGNPPKSTSTNITITVIDVNDNSPVWVSPPSLNSSEPEARFNISKEAAIGSIVAQLKALDQDQDDFGKISYVIMSTESHYQGEQFLTLNETSGILSIHQHPLSYGRTLLKISAHDHGHPPLKNYATLIINVQQPNDNLFSGLNM 796
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000051413.1 (SMESG000051413.1) HSP 1 Score: 464.922 bits (1195), Expect = 2.085e-145 Identity = 281/798 (35.21%), Postives = 459/798 (57.52%), Query Frame = 1 Query: 73 KLLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKA-----SYFIKSPFLKLSDK-GDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRL-PSI-GLIVKKPLDYEVKSQYFATLEACD-TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNS----KIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTP--LSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN-----NKLLFILNQVTGELRVARL-LPIGQFQLFLRASDNGRPPRHNETSLFIFI---NGDEVATLNM 2394 K LE KI + YL S Q +TF ++EE+ +++GN+ + S K + + S + ++ ++ ++ + S IDL+TIC+ CC++ +C+++T ++ ++ S +S S ++ V V D +DN+P F+ KQ + ++E I + +D A+D D + N+ Y F + + TF L + P I ++V + L+YE+K YF L+ CD T + C +++ + V+D+NDN P F +++Y ++I E++P+G++I+ V A D DS LFNK YGF S+ N+++ F I + +G I L++ LS + +Y F V+A D +++ F K A++ I+++D+NDN P I+ L G I I+E PP+ LF++ V+D D G+NA V+C L + + + EIY + +IRSFDYE + I+AEI C D GSP ++ K++ + + D+NEF P +F++L EN + I+ + ASD+D A+L+YS YFTI+ TG+I LD+EM + ++ + +TD++ NP T V + +LD+NDN P F+ + F I E LS YSK+ RI A D DKDEIN+ ++F+L HT++++ + E IF V+ GEI TV +DRE + NYT+ I A D G P S N TI V D NDN P WV+P L+S NI+ + G ++ +L+A D D + ++Y +M+ + LN+ +G L + + L G+ L + A D+G PP N +L I + N + + LNM Sbjct: 3 KELEGKIILFHLLCGYLPSIISSQEITFHLVEENKRGLILGNLNYFITSKLKTDPRITEFHVSSKYFEIDNQTKNVQMVSTIDLDTICSTDSECCDKEKCVIETKVVVQEYSQYKS-SFSLKVEVKDLDDNFPLFLDDKQIIKLSEKISINTSISIDGAMDKDFSKINQKKNYQFFDESMTFQLFVYQYDPDILSIMVMRSLNYELKQIYFCKLKVCDKTYQNCVRKSIIVQVIDENDNEPIFVEKKYLVKIPESYPIGKKILKVTAKDADSSLFNKTFYGFQ--SNYNVKSIFNIEKESGVISLKQSLSINKKSRYLFTVYAIDALSVTFKKDYADVEIEIEDVNDNYPIISLLHGYMPDPYAIRIDENTPPKTLFSIHVSDKDTGINAVVNCSLRVRRKDLLEMIKADMEIYQIRTIRSFDYEILQLIEAEILCIDSGSPALLSRKAIKIIIVDVNEFEPSIRNNFEELSFKENIPEHKFIMSIDASDKDKGAILRYSLDEIGRIYFTINSRTGEIIMSNVTLDKEMNDSVKFKVFITDSLINPHTATMFVTVTILDQNDNAPQFVH-TLPFTIQEGLSFYSKLSTRIEAKDADKDEINHSIIFRLLHTYNNKMELLHEKIFDVSSKGEIETVVTIDREKDSNYTLTILAQDKGNPPKSTSTNITITVIDVNDNSPVWVSPPSLNSSEPEARFNISKEAAIGSIVAQLKALDQDQDDFGKISYVIMSTESHYQGEQFLTLNETSGILSIHQHPLSYGRTLLKISAHDHGHPPLKNYATLIINVQQPNDNLFSGLNM 796 The following BLAST results are available for this feature:
BLAST of Protocadherin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30032108 ID=SMED30032108|Name=Protocadherin|organism=Schmidtea mediterranea sexual|type=transcript|length=3533bpback to top protein sequence of SMED30032108-orf-1 >SMED30032108-orf-1 ID=SMED30032108-orf-1|Name=SMED30032108-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1081bp MKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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