Protocadherin

Overview
NameProtocadherin
Smed IDSMED30032108
Length (bp)3533
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Protocadherin (SMED30032108) t-SNE clustered cells

Violin plots show distribution of expression levels for Protocadherin (SMED30032108) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Protocadherin (SMED30032108) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Protocadherin (SMED30032108) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30032108

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30032108SMESG000033639.1 SmedASXL_017166SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
nervous systemSMED30032108SMESG000033639.1 dd_Smed_v4_12429_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30032108SMESG000033639.1 dd_Smed_v4_12429_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neuronSMED30032108SMESG000033639.1 dd_Smed_v4_12429_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		whole organism asexual adult colorimetric in situ hybridization evidence
parenchymaSMED30032108SMESG000033639.1 dd_Smed_v4_12429_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30032108SMESG000033639.1 dd_Smed_v4_12429_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30032108SMESG000033639.1 dd_Smed_v6_12429_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655])

HSP 1 Score: 263.077 bits (671), Expect = 4.354e-72
Identity = 236/788 (29.95%), Postives = 368/788 (46.70%), Query Frame = 1 
Query:  133 GSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETI--CAQHEMCCEEVECILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            G    V +K+ EE P + +IG++   +  F    +  K    +P+L++  K GD+  + + ID E +  C Q+++  +   CIL+  +   D   + S  +    + V D NDN P F  P  T+ + EN  IG    +  A D DA   N V  Y  +   E    F L      + + P   LIV   LD E    Y  T++  D     + ++  L + VLD NDN P F +  Y+ E+ EN P+G  +I V+A D D     +I Y FH+  +  +R    +  NTG I +Q  +  +     +F V A D+       A A + + VKD+NDN+P I        T   G + I  +  +    +  +QV+D D G NA V+C +        R      +   + Y L +    DYE  ++   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN + G  I +++ASD D    A L YS   EP     FTI P TG+I+     LDRE  E  E+ ++  D       G  TV++ VLD NDN P F+ +SG  F++ EN+ + S V G +   D DK E N +V   ++     F  QN            +G IL+    DRE    YT +++A D G+P  SA+   TI V D+NDN P    P ++    H + +T  +  G  + ++ A D D G N+ + YS+   N   LF +   +G + + + +     G  +L ++ SD G+PPR+    + +++N
Sbjct:   55 GHATRVVYKVPEEQPPNTLIGSLAADY-GFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLREC-QNQLPGDP--CILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDR-GTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKT-SLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NAQVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTS---HKL-LTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 813
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH1 (protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655])

HSP 1 Score: 263.462 bits (672), Expect = 1.227e-71
Identity = 236/788 (29.95%), Postives = 368/788 (46.70%), Query Frame = 1 
Query:  133 GSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETI--CAQHEMCCEEVECILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            G    V +K+ EE P + +IG++   +  F    +  K    +P+L++  K GD+  + + ID E +  C Q+++  +   CIL+  +   D   + S  +    + V D NDN P F  P  T+ + EN  IG    +  A D DA   N V  Y  +   E    F L      + + P   LIV   LD E    Y  T++  D     + ++  L + VLD NDN P F +  Y+ E+ EN P+G  +I V+A D D     +I Y FH+  +  +R    +  NTG I +Q  +  +     +F V A D+       A A + + VKD+NDN+P I        T   G + I  +  +    +  +QV+D D G NA V+C +        R      +   + Y L +    DYE  ++   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN + G  I +++ASD D    A L YS   EP     FTI P TG+I+     LDRE  E  E+ ++  D       G  TV++ VLD NDN P F+ +SG  F++ EN+ + S V G +   D DK E N +V   ++     F  QN            +G IL+    DRE    YT +++A D G+P  SA+   TI V D+NDN P    P ++    H + +T  +  G  + ++ A D D G N+ + YS+   N   LF +   +G + + + +     G  +L ++ SD G+PPR+    + +++N
Sbjct:   55 GHATRVVYKVPEEQPPNTLIGSLAADY-GFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLREC-QNQLPGDP--CILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDR-GTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKT-SLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NAQVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTS---HKL-LTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 813
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661])

HSP 1 Score: 256.529 bits (654), Expect = 5.351e-70
Identity = 237/794 (29.85%), Postives = 363/794 (45.72%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C +      Q + + I EE P ++ IGNI       H++ +   ++  +         +P +K+S   G++  +S RID E +CA      EE EC  +  ++     +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N V  Y        F LD    P       LIV++ LD E K  Y   ++  D  T ++ +T  L++ V D NDN P F + + ++ I EN PVG  +I + A D D     +I Y F        +  F +   TG I +Q+ L  +    +K  V A+D  +     A A + I V D+NDN P I         N  + ++E DP   ++  + V+D D  VN  V C + ++    F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L + EN  +G  +  +SA+D D        +   PN  +F +D  TG + +  R  DRE  ER    +   D    P   Q  VI+ VLDENDN P F      F +SENL  YS V G I  TD D  E N  V   +    +  +  + +P      SG I +    DRE   +YT +++A D G P  S+    TI V D NDN P  ++P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + +  +  P  +G  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE-NKAVTLSI---LNDNDNFVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVN 775
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661])

HSP 1 Score: 256.529 bits (654), Expect = 2.048e-69
Identity = 237/794 (29.85%), Postives = 363/794 (45.72%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C +      Q + + I EE P ++ IGNI       H++ +   ++  +         +P +K+S   G++  +S RID E +CA      EE EC  +  ++     +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N V  Y        F LD    P       LIV++ LD E K  Y   ++  D  T ++ +T  L++ V D NDN P F + + ++ I EN PVG  +I + A D D     +I Y F        +  F +   TG I +Q+ L  +    +K  V A+D  +     A A + I V D+NDN P I         N  + ++E DP   ++  + V+D D  VN  V C + ++    F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L + EN  +G  +  +SA+D D        +   PN  +F +D  TG + +  R  DRE  ER    +   D    P   Q  VI+ VLDENDN P F      F +SENL  YS V G I  TD D  E N  V   +    +  +  + +P      SG I +    DRE   +YT +++A D G P  S+    TI V D NDN P  ++P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + +  +  P  +G  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE-NKAVTLSI---LNDNDNFVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVN 775
[Close]
BLAST of Protocadherin vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661])

HSP 1 Score: 256.529 bits (654), Expect = 2.081e-69
Identity = 237/794 (29.85%), Postives = 363/794 (45.72%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C +      Q + + I EE P ++ IGNI       H++ +   ++  +         +P +K+S   G++  +S RID E +CA      EE EC  +  ++     +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N V  Y        F LD    P       LIV++ LD E K  Y   ++  D  T ++ +T  L++ V D NDN P F + + ++ I EN PVG  +I + A D D     +I Y F        +  F +   TG I +Q+ L  +    +K  V A+D  +     A A + I V D+NDN P I         N  + ++E DP   ++  + V+D D  VN  V C + ++    F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L + EN  +G  +  +SA+D D        +   PN  +F +D  TG + +  R  DRE  ER    +   D    P   Q  VI+ VLDENDN P F      F +SENL  YS V G I  TD D  E N  V   +    +  +  + +P      SG I +    DRE   +YT +++A D G P  S+    TI V D NDN P  ++P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + +  +  P  +G  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE-NKAVTLSI---LNDNDNFVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVN 775
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4])

HSP 1 Score: 165.622 bits (418), Expect = 7.371e-41
Identity = 168/590 (28.47%), Postives = 266/590 (45.08%), Query Frame = 1 
Query:  640 VKKPLDYEVKSQYFATL---EACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVL-DENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQND----NDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            + K +D EV  ++   +   E  D     +T  + +HVLD  DN P F +  Y  EI E+ P+G  +++V A D DS    +I Y    L + N +N   I   +G I+    L  +     +  V A+DK      ++ A + I V D+NDN+P   S S N  I  N T P   + T++ TD+D G N  V   +     I    +D    E+    ++R         I A I   D   P   +   L ++V DIN+ AP      + + L EN   G  + +V A D D     ++KYS  G  +  F ID  +G IK+  + LDRE   R  + +   D +  P     T I  VL D NDN PTF        ISE +   S++   + A D D+D+   K+ ++++      +R +   I  + + G IL+V    +  +H   VEI A D G   L       ++++D N     ND     P S       V I  +SP GY +I L+A D D G+N+ + YS+  ++   F ++  +G++ V+  L       F + + ASD+  PP +  T + + ++
Sbjct:  224 LAKSMDREVLDKHILKVTAYERVDPTISASTTVV-VHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYS---LGEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDK-GTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAV-IATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEV----TLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED--FIIDEDSGLIKT-TKLLDRETTARYSLKVTARD-MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQII-TLKAVDNDEDQ---KITYRIEEA----DREVFS-ILDIGDQGAILSVSGELKRQDHKVRVEISATDQG--GLQGRCVVNVFIDDVNSAPYFND----HPFS-------VKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI--DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILD 775

HSP 2 Score: 160.999 bits (406), Expect = 1.809e-39
Identity = 184/670 (27.46%), Postives = 306/670 (45.67%), Query Frame = 1 
Query:  355 ILKTTIMAKDKSSDQSESIN-IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEP-TGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQC--NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSL------SSIRSFDYENERE---IKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIE-NPKTGQCTVIIEVLDE-NDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN-NKLLFILNQVTGELRVARLLPIGQFQLFLRA 2310
            +++  ++A DK + + ES   + ++V D NDN P F      V + EN  I   +   +A D D  +  +VH  +      G   +D S   +  + +++ +D +  S   A + A D  +    +T  L I+V+D ND+ P+    +  I + EN  +G+++  V AID+DS     I Y      D      FII E++G IK  K L  +   +Y  KV A D M          I + +KD+NDN+P       N  + I+E  P   ++ TL+  D+D             Q I  +R++    E++S+       +I S   E +R+   ++ EI   D G  +      +NV + D+N  AP F      +K+ E+   G+ ++ + A D D     +  ++ + + +F IDP +G I S    LDRE  +R   ++IVT +   +P     T I  +LD+ NDN P F   S    ISE++   +    +++A D D    N  V + L  +  S     S  +F++   SG +    KLDRE      + I A D G P LSA    T+ + D NDN P +   LS     + + I  NSP G  +  + A D D G+N+++++ +    +  LF + +   +  V R+L   +F    +A
Sbjct:  340 LIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYS---TGEVTLRERIDAK-NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED------FIIDEDSGLIKTTKLLDRETTARYSLKVTARD-MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYN--VTISEEMPRGSQIITLKAVDND-----------EDQKIT-YRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQ--GRCVVNVFIDDVNS-APYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQFFRIDPSSGDI-SVSSDLDRE--DRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFL-QVSAIDADIGP-NGIVDYFLNESSSSP----SIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTF-EQLS-----YDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKA 966

HSP 3 Score: 147.132 bits (370), Expect = 3.399e-35
Identity = 193/741 (26.05%), Postives = 319/741 (43.05%), Query Frame = 1 
Query:  166 EESPIDMVIGNIVHLHPSFNKASYFIKSP--------FLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAK-DKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTI--DPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTY----SVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLR---ASDNGRP 2328
            E++PI+ +I ++   H S     Y + +P        F   +  G++ L+  +D E +  +H         ILK T   + D +   S ++ +HV   D  DN P F K      + E+ PIG  +    A D D+     + +Y   E  G  NL      S  +    PLD E  S     + A D  T K+ +T  +EI V+D NDN P F+   Y + ILEN  +   I  V+A D+D     K+ Y    ++ ++      I  +TG + L++++ AK        + A D    A    V  + I V D+ND++P + +      +E N      E+  +   D+D G N  +   +  +   DF +D     I    + +  D E       ++   D G+P      ++ V +KDIN+ AP F+K    + + E   +G  I+ + A D D    + Y       + F+I      G I S    L R+   ++ + I  TD  +    G+C V +  +D+ ++ P F D      I E+ S        + A D D+ + N ++++ +     SQ  RI +P      SG+I     LDRE    ++V + A D   P L+      + ++D NDN P + +  SS+       I+ + P G   +++ A D D G N  V Y    S  + +  LF L++ +G LRV+  L   QF + +    A D G P
Sbjct:  176 EDTPIETIIASVKASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVL-DKH---------ILKVTAYERVDPTISASTTVVVHVL--DVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEI-EYSLGEGNGK-NLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYS---MASSSGIGGLTIDYSTGEVTLRERIDAK-NSPITAVIRAKDGAQPALSSTVP-LTINVIDINDHAPTLIAAQKMITLEEN-VAIGEEVGRVYAIDEDSGPNGIIKYSM--EGSEDFIIDEDSGLI---KTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQD-HKVRVEISATD--QGGLQGRCVVNV-FIDDVNSAPYFNDHPFSVKIPEH-SPIGYPVITLKAEDHDRGD-NARIVYSID---SSQFFRI-DP-----SSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTS--SSYAA----TISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP 870

HSP 4 Score: 98.5969 bits (244), Expect = 2.322e-20
Identity = 114/423 (26.95%), Postives = 189/423 (44.68%), Query Frame = 1 
Query:  358 LKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACD-TNKQCNTQA-LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLL---QQYINDFRLDAVGNEIYSLSSIRSFDYENER-----EIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKL-KLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI 1587
            ++  I A D+   Q   + ++V + D N   P F     +V + E+ PIG+ +   +A D D     R+   I  + +  F +D    PS G I V   LD E ++ +   + A D  +   NT   +E+ + D NDN P F+   Y   I E+ PVG   + V AID D      + Y  +E S +     F +   +G++++  KL  +        +FA D+   +   A + I + + D+NDN+P    LS +  + I E  P    + T+   D D G NA++S ++       + D   DA  N +  + +   FDYE +      E++A        S +  +   + +HV D+N+  P   KDF  L    +N +    I  + A D D +A L+Y    E ND    + +TG+I
Sbjct:  651 VRVEISATDQGGLQGRCV-VNVFIDDVNSA-PYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI--DSSQFFRID----PSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSL-SAASEITLTLSDVNDNAPTFEQLSYD--LYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA-------SSGQLSSTVPVRIHVSDVNDNKPAL-KDFVILMNRFDNVQMARQIGFIPAFDPDQNATLEYFL--EENDLIEAEKYTGKI 1052
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0])

HSP 1 Score: 149.828 bits (377), Expect = 5.277e-36
Identity = 180/720 (25.00%), Postives = 307/720 (42.64%), Query Frame = 1 
Query:  157 KIMEESPIDMVIGNI---------VHLHPSFNKASYFIKSPFLKLSDKGD--LMLSSRIDLETICAQHE----MCCEEVECILKTTIMAKDKSSDQ-----SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND----FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYS-FTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFI 2235
            +I+ E P  + IG+I           +H S N+     ++   K  D G    +  S +D E +    E         ++C + + I  + ++ D      S  + +   + D     P+F K    V + E+ PIG  L    A ++   ++ R+ +Y  +       +D     S  + ++K  D+E +  Y  T+ A + N + +T  + I + D NDN+P F   EY + + E     + ++ V A D DS  F ++ Y  H LS++   ++F I   TG +  QK L+   R ++   V A D    +   + ANI I V D +  +P+ +     SK EI  T    E     +    +G  + V   +   Y  D    F +D    +IY     R  D +    +   I+        N     + + ++D N+  P+F     ++ + E+ +       V ASD+D   +  ++YS  +  P     ID  TGQ+ +G   LD E     ++ +  TD    P++   T+ I VLD NDN P F        + EN S    + G++ A DKD  E N ++++++  T  S+   I E +      G + T + +DRE+  +  + I A D G+P  S+  +  I V D NDN P  ++       I  + + A SP    I  + A DPD G N +V Y     + L  +
Sbjct:  420 QIIIEHPQLLTIGDINDNAPQWHSSQIHISLNRTQGGSRTLTAKDPDLGQNGWIRYSVLDTELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRI-RYSLQNQDEHLTVDTM---SGTVCIQKTFDFEKQKSYQTTVIATNANSETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSY--HILSES---SSFSINPVTGEVFAQKPLA---RGRFHLVVSAKDGGGQSSENS-ANIHITVIDKDTKTPQFS----RSKYEIRTT----EDILPGIAIGSVGAMSKVKYSI---YSGDQDHNFSIDEDTGKIY---VTRYLDADVHDTVLLNIQATLPSGESN--QTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTG-SLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLEN-SPPKTIVGKVVARDKDSLE-NGQIVYRI--TNGSEYFGIDEKL------GNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLS-------ITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQSSLFVV 1092

HSP 2 Score: 102.834 bits (255), Expect = 1.086e-21
Identity = 182/787 (23.13%), Postives = 315/787 (40.03%), Query Frame = 1 
Query:   88 KIDFCIIFLFYLCYQGSCQTVT-FKIMEESPIDMVIGNIVHLHPSFNKASYFIKSP------FLKLSDK-GDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEP--TGTFNLDQSRL---PSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALE--IHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAF-HKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNE-----------IYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHN-ILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFI 2364
            K +  I  L +L +   CQ +T F + E + I   IG I           YF+  P      FLK+ ++ G++   + +D E   ++ ++   +VE              +  E+I+I V V D+NDN P F      + ++E   +G    L    D D    + VH+++  +      F L   ++       L+V   LD E + +Y   +EA D  K      L   I ++D NDN P FS+  Y   +  N  +G  +I V+A D D    ++I Y   + S  +  N F I++ +G I     L       +   V A+D  + +    AV  I +    L+     I  L  ++   + E        TL        + A VS  + QQY  D +L  +G+            +Y L      D E   E   +      G    + H  L + + DIN+ AP++      + L  NR QG +  L     D   +  ++YS      +  +ID  TG+I      +D  +   I+  +   D      +    V+ ++LD    PP F        I E+ +       ++ A +      N+K   +++++  +Q+  ++      T SG +   K  D E   +Y   + A  T     ++    +I ++D NDN P +  P   H     + +     P   ++ + A+D D G    V+Y +++ +   F +N VTGE+   + L  G+F L + A D G     N  ++ I +
Sbjct:    6 KWNILIFSLIFLIFPTFCQCLTKFTVPESAQIGTRIGWISGKREESAAPKYFVVFPDEQTSKFLKVDERSGEISTIAHLDYEK-RSKFDIVAVKVE--------------ESGETIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFD-VHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSN-FAISQ-SGVITTTASLLPA--STHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENS------TLG------SIVARVS--IAQQY-RDTKLRLIGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQ-IIIEHPQL-LTIGDINDNAPQWHSSQIHISL--NRTQGGSRTLTAKDPDLGQNGWIRYSVLD--TELVSIDKETGRIFVP-NTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPED-TPIGTCLVKVVANNSQCG--NSK---RIRYSLQNQDEHLTVD----TMSGTVCIQKTFDFEKQKSYQTTVIA--TNANSETSTSLISIRLKDVNDNWPIFY-PNEYH-----LTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESS-SFSINPVTGEVFAQKPLARGRFHLVVSAKDGGGQSSENSANIHITV 731

HSP 3 Score: 91.2781 bits (225), Expect = 3.611e-18
Identity = 92/334 (27.54%), Postives = 155/334 (46.41%), Query Frame = 1 
Query: 1417 PRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPND----YFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD--KDEINNKVLFQ--LQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLL---FILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVAT 2385
            P F +   K  + E+ + G  I  +S   R+ SA  KY F   P++    +  +D  +G+I S I  LD E  +R + +I+     E+ +T    +++EV DENDN P+F D      ISE  +           TD D  K +++  V+ Q  + + F   +R+++E +       +++   +LDRE    Y + I A D G P        +I + D NDN P +          +T +++AN   G  +I +QATD D GENS ++Y +   +      F ++Q       A LLP     + + ASD+G P   +   + I + G  +++
Sbjct:   20 PTFCQCLTKFTVPESAQIGTRIGWISGK-REESAAPKY-FVVFPDEQTSKFLKVDERSGEI-STIAHLDYE--KRSKFDIVAVKVEESGET--IDILVEVDDENDNAPSFADQVVKLEISE-FAQLGTSFALPTVTDGDGPKFDVHRFVILQGNVNNVFKLASRKVNEQL-----QADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVF------SRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASLLPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSS 334

HSP 4 Score: 88.1965 bits (217), Expect = 3.470e-17
Identity = 132/572 (23.08%), Postives = 244/572 (42.66%), Query Frame = 1 
Query:  652 LDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEF-APRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTG-EPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEI----LTVKKLDREINHNYTVEIRAFDTGLPMLSA--HKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL-----PIGQFQLFLRASD-NGR 2325
            LD E+  +Y   +    + +Q  T+ +++ V + NDN PSF   + +  + EN  VG  +  V A  KD D    + Y     S       F I + TG+I L   L  +V  ++   + A D     F     N+ I V D+NDN+P  +     + +      P +    ++  D D      ++  L Q   + FR+      ++    ++      ER +   +   D+G P       ++V + +      P FEK   + +++EN + G  I  +S  +   S    Y     E +  F+ID       +G   +DRE     E  + + + +   +  QC   + VLDENDN P F  ++   ++ ++++   K+ G+I A+D+D  E N +V +++    D     ++       ++G I        +LD   N  + + + A D G P  +A      ++ +   + + P +V P      ++ V++  ++  G ++ K++A++     N  + YS+  +   L I +  TGEL +   L     PI    ++L  SD NGR
Sbjct: 1888 LDREILERYSLKVIGTGSGQQIGTR-VDVRVNNLNDNVPSFPMSKPR-RVPENLRVGSYVATVGA--KDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATDGSFDTF----TNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLD--ARGALTYSLGQGSSSIFRVAPESGALF----MKVLPPAGERYL-VTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSGEE---SREFHYRIQDPEASKIFSIDKFGRLFVAG--PIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLKDSMAHGQKI-GQIMASDQDSGE-NGRVSYRILSGNDLNIVTLNP------DTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLP------VYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSLKEHQGKLGI-DVKTGELTLKTHLDWESEPI--ISMYLSVSDGNGR 2422

HSP 5 Score: 74.3294 bits (181), Expect = 5.014e-13
Identity = 112/445 (25.17%), Postives = 199/445 (44.72%), Query Frame = 1 
Query:  451 PKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGT--FNLDQSRLPSIG-LIVKKPLDYEVKSQYFATLEACDTNKQCNTQALE----IHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQ----KYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVT-----------DDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINI--IVTDAIENP-KTGQCTVIIEV 1704
            P F K +    V EN  IG        +   +   +R   Y  ++P  +  F++D+      G L V  P+D E ++ +   +E    N+   +Q ++    + VLD+NDN P F+   Y + + ++   GQ+I  + A D+DS    ++ Y    LS N++ N   +  +TGSI+L +   A++ +     ++  V A D    A   AV  + + +        K++S SG++   +    P  E+  L+ T            + +G+  +     L+++     +D    E   L+     D+E+E  I   +   D G+ R+ A   L + V+ ++EFAP F K    L++  +   G ++ Q+ A D DG    V+KYS + +      I+ HTG I     RL + +V R  + I  I   A  +P K  + TV +E+
Sbjct: 2129 PGFEKAEFRFEVMENSKIGL------QIGNLSGEESREFHYRIQDPEASKIFSIDK-----FGRLFVAGPIDREQRATHEFQVEI--DNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRI--LSGNDL-NIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPA-RAAVGKVQVSL--------KMSSWSGSAPFFVL---PVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSLKEHQGKLGIDVKTGE---LTLKTHLDWESEPIISMYLSVSD-GNGRS-AVVPLKIVVEPVDEFAPVFTKSSYTLQIPISTPAGESVGQMQAIDEDGGVHGVVKYSIS-DRQSTVKIEEHTGII-----RLQKPLVSRRNLTIEQITVVAYSSPTKQSKTTVYLEI 2534

HSP 6 Score: 69.707 bits (169), Expect = 1.661e-11
Identity = 128/535 (23.93%), Postives = 219/535 (40.93%), Query Frame = 1 
Query:  274 GDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKP--KQTVNVAENEPIGFYLYLDRALDADATSA-----NRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVL---DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFH-ELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAE----IECYDHGSPRNVAHKSLNVHVK--DINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG--SAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD 1821
            G + L++ +D E +  +H +           TI A D S D     N+ + VSD NDN P F KP  + TV+ A   P   +  ++ A D DA  A      +    IF+    +  L    LP  G             +Y  T+ A D      + ++ + V+    +  + P F + E++ E++EN  +G QI          +L  +    FH  + D      F I +  G + +   +  + R  ++F+V   ++M M   K      + V D NDN P  TS++    ++ +     +++  +  +D D G N  VS ++L    ND  +  +  +  S+      D + +    A     +E  DHG P   A   + V +K    +  AP F     ++ +LE+   G  + ++ AS+R G  +  L YS   E      ID  TG++      LD E    I + + V+D           +++E +DE    P F   S    I  +  +   V G++ A D+D
Sbjct: 1982 GTIHLTAPLDFE-VLPEHTL-----------TIKATDGSFDTF--TNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIE-AHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPPAG------------ERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQI---------GNLSGEESREFHYRIQDPEASKIFSI-DKFGRLFVAGPIDREQRATHEFQVEIDNEM-MTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLK-DSMAHGQKIGQIMASDQDSGENGRVSYRILSG--NDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYSLK-EHQGKLGIDVKTGELTLKT-HLDWESEPIISMYLSVSDGNGRSAVVPLKIVVEPVDE--FAPVFTKSSYTLQIPISTPAGESV-GQMQAIDED 2470

HSP 7 Score: 62.003 bits (149), Expect = 2.969e-9
Identity = 135/583 (23.16%), Postives = 232/583 (39.79%), Query Frame = 1 
Query:  364 TTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQ-------TVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSF-SQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENEREI--KAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF----TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDND 2064
            T +  KD   D S ++ IHV         P F +P +        V + EN  I  +    R L    T  +R   + F+     F+++ +     G I   PLD E   ++   +   D   + ++  + + V DQNDN P   +    ++EI E+  VG  +    A D D     K  + F  L D++   +  +   TG + L ++LS+    K K +V       +   K   N+ I  ++    +         + +   +   PR  F  ++  +  G+  ++    ++  I+  F +D+ G        IR+ + E +REI  +  ++    GS + +  + ++V V ++N+  P F    +  ++ EN   G  +  V A D D  A L+Y      +G+   +F ID  TG I      LD E++    + I  TD   +  T    + I V D NDN PTF        +S    S  +   +I A D D       + + L           S  IF+V  ESG +    K+       Y V + A D G+P  S     ++ + +    D
Sbjct: 1603 TIVAQKDDELDYS-TLKIHVE--------PVFTEPPKISSTSCGVVTIEENVGIEDF---KRILATGMTEESR---FRFQGNAPKFSINST----TGSISVLPLDREASQEHLLIIILTDGGSRNDSCTVRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGK--FSFELLEDSS--GSLDLVPETGDLVL-RRLSSLQSWKIKLRVVDHGVPGLYVEK---NLEISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAKLQPELAGLTYSI----VEGNIDSAFSVDSEG-------VIRT-NLELDREILERYSLKVIGTGSGQQIGTR-VDVRVNNLNDNVPSFPMS-KPRRVPENLRVGSYVATVGAKDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHL-TAPLDFEVLPEHTLTIKATDGSFDTFT---NLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDA---RGALTYSLGQG--------SSSIFRVAPESGALFM--KVLPPAGERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTD 2127
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4])

HSP 1 Score: 129.798 bits (325), Expect = 6.988e-30
Identity = 165/589 (28.01%), Postives = 263/589 (44.65%), Query Frame = 1 
Query:  358 LKTTIMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKV-FAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKY----SFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGE------ILTVKKLDREINHN-YTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDP 2067
            +   I AKD +    S ++ + ++V D ND+ P  +  ++ + + EN  IG  +    A+D D +  N + +Y   E +  F +D+      GLI   K LD E  ++Y   + A D        +  I V+  D NDN P+F ++EY + I E  P G QII ++A+D D D   KI Y   E +D  + +   I +    + +  +L    RQ +K +V  +A        + V N+FI   D+N ++P       + KI   E  P    + TL+  D D G NA +   +       FR+D    +I S+SS    D E+       +   DH SP       + V + DIN+ +P+F        + E+   G + LQVSA D D   + ++ Y    S +      F +D  +G ++    +LDRE    I + I   D      +    + + + D NDN PTF  +S    I+EN    S V G I A D D+ + N  + F++    D++       +F + E  E      ILT  + D E   N +  E++A  +G   LS+     I+V D NDN P
Sbjct:   86 ITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDED-SGPNGIIKYSM-EGSEDFIIDEDS----GLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDED--QKITYRIEE-ADREVFSILDIGDQGAILSVSGELK---RQDHKVRVEISATDQGGLQGRCVVNVFI--DDVN-SAPYFNDHPFSVKIP--EHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF--FRIDPSSGDI-SVSS--DLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVS-SKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTV-GTIVARDADEGD-NADISFRIFGGADAK-------LFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA-SSG--QLSSTVPVRIHVSDVNDNKP 639

HSP 2 Score: 123.25 bits (308), Expect = 7.454e-28
Identity = 128/446 (28.70%), Postives = 201/446 (45.07%), Query Frame = 1 
Query: 1063 IKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVL-DENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQND----NDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            I V D+NDN+P   S S N  I  N T P   + T++ TD+D G N  V   +     I    +D    E+    ++R         I A I   D   P   +   L ++V DIN+ AP      + + L EN   G  + +V A D D     ++KYS  G  +  F ID  +G IK+  + LDRE   R  + +   D +  P     T I  VL D NDN PTF        ISE +   S++   + A D D+D+   K+ ++++      +R +   I  + + G IL+V    +  +H   VEI A D G   L       ++++D N     ND     P S       V I  +SP GY +I L+A D D G+N+ + YS+  ++   F ++  +G++ V+  L       F + + ASD+  PP +  T + + ++
Sbjct:    4 ITVVDVNDNAPVFASDSYNVTILENITIPAV-IATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEV----TLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED--FIIDEDSGLIKT-TKLLDRETTARYSLKVTARD-MGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQII-TLKAVDNDEDQ---KITYRIEEA----DREVFS-ILDIGDQGAILSVSGELKRQDHKVRVEISATDQG--GLQGRCVVNVFIDDVNSAPYFND----HPFS-------VKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI--DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILD 416

HSP 3 Score: 120.939 bits (302), Expect = 3.396e-27
Identity = 142/542 (26.20%), Postives = 238/542 (43.91%), Query Frame = 1 
Query:  730 LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTI--DPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTY----SVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLR---ASDNGRP 2328
            +EI V+D NDN P F+   Y + ILEN  +   I  V+A D+D     K+ Y    ++ ++      I  +TG + L++++ AK        + A D    A    V  + I V D+ND++P + +      +E N      E+  +   D+D G N  +   +  +   DF +D     I    + +  D E       ++   D G+P      ++ V +KDIN+ AP F+K    + + E   +G  I+ + A D D    + Y       + F+I      G I S    L R+   ++ + I  TD  +    G+C V +  +D+ ++ P F D      I E+ S        + A D D+ + N ++++ +     SQ  RI +P      SG+I     LDRE    ++V + A D   P L+      + ++D NDN P + +  SS+       I+ + P G   +++ A D D G N  V Y    S  + +  LF L++ +G LRV+  L   QF + +    A D G P
Sbjct:    2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHY---SMASSSGIGGLTIDYSTGEVTLRERIDAK-NSPITAVIRAKDGAQPALSSTVP-LTINVIDINDHAPTLIAAQKMITLEEN-VAIGEEVGRVYAIDEDSGPNGIIKYSM--EGSEDFIIDEDSGLI---KTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQD-HKVRVEISATD--QGGLQGRCVVNV-FIDDVNSAPYFNDHPFSVKIPEH-SPIGYPVITLKAEDHDRGD-NARIVYSID---SSQFFRI-DP-----SSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTS--SSYAA----TISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTP 511

HSP 4 Score: 98.2117 bits (243), Expect = 2.802e-20
Identity = 114/423 (26.95%), Postives = 189/423 (44.68%), Query Frame = 1 
Query:  358 LKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACD-TNKQCNTQA-LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLL---QQYINDFRLDAVGNEIYSLSSIRSFDYENER-----EIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKL-KLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI 1587
            ++  I A D+   Q   + ++V + D N   P F     +V + E+ PIG+ +   +A D D     R+   I  + +  F +D    PS G I V   LD E ++ +   + A D  +   NT   +E+ + D NDN P F+   Y   I E+ PVG   + V AID D      + Y  +E S +     F +   +G++++  KL  +        +FA D+   +   A + I + + D+NDN+P    LS +  + I E  P    + T+   D D G NA++S ++       + D   DA  N +  + +   FDYE +      E++A        S +  +   + +HV D+N+  P   KDF  L    +N +    I  + A D D +A L+Y    E ND    + +TG+I
Sbjct:  292 VRVEISATDQGGLQGRCV-VNVFIDDVNSA-PYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI--DSSQFFRID----PSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSL-SAASEITLTLSDVNDNAPTFEQLSYD--LYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA-------SSGQLSSTVPVRIHVSDVNDNKPAL-KDFVILMNRFDNVQMARQIGFIPAFDPDQNATLEYFL--EENDLIEAEKYTGKI 693
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: cdh-3 (Cadherin-3 [Source:UniProtKB/Swiss-Prot;Acc:P34616])

HSP 1 Score: 124.405 bits (311), Expect = 3.507e-28
Identity = 169/628 (26.91%), Postives = 270/628 (42.99%), Query Frame = 1 
Query:  421 VSVSDKNDNWPKFVKPKQTVNVA---ENEPIGFYLYLDRAL--DADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYEN-EREIKAEIECYDHGSPRNVAHKSLNVHVKDINE-FAPRFEKDF----QKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIEN-PKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDY---------GENSNVTYSVMNNNKLLFI 2235
            + V+D+ND  P+F+     VN+    E + + + L +  ++  D D      V   I    T  F ++ +    + LI   PLD E  S +   +EA D        T  + IHV D NDN P F    Y I+I EN  +G +II + A DKD D   ++ Y     S++ I   F I   TG I +  K++ +  ++++F V   D    +  K +    I V+D NDN P I     NS I +   DP R +  + V                   IN   LD   +  +SL++      EN E  +K+ ++      P  V       HV  +   F P   K F    +KL  +  RE     L V  ++ D    ++YS     +D+  ++  TG +K+    LD E      + II T   +N P +      I+++D NDN P F      FN++EN  S  K+ G + A D D+   +++V +++    D+ +       F VTESG+I +V+ LDRE    Y + + A D G P    +    + V D++DN P +         I  V +  +   G  +I+L A+D D          G    + + V  N  ++F+
Sbjct: 1636 IHVTDENDEAPRFIT-GDVVNLKVLEELDTVSYPLIIGSSIAEDLDEGQNGLVTYSILSGNTSLFAVNSTTGDILSLI---PLDREESSLHELLIEAKDAGIPSLSATSKILIHVGDINDNTPEFELSSYFIKISENSKIGSKIIRILATDKDKDA--ELQYSLE--SNDEITIPFRINVATGWITVAGKVNREENEEFRFFVKVTDGEKSS--KVIVE--IHVEDFNDNHPMIN--DRNSDIFV--PDPTRSVEIIHV-------------------INVHDLDKSDHLKFSLNNSNLNLSENGEITLKSPLQT---AVPVRVTVSDDAGHVAFMEYLFHPHSRKHFPVFVEKLDTVSVREHDEQELAVFKANGDS---IRYSIVSRCSDHLEMEKSTGILKTK-SSLDAEEYSECLVFIIATTYFDNKPLSTITKATIKIVDINDNSPRFDQQLYRFNVTEN--SGPKLIGHVIARDIDR---SSRVFYEIVGG-DANHE------FMVTESGQIESVRDLDRETKSEYHLIVEAIDDGKPRRRGNTTVIVTVLDEDDNAPRF-------SRIFHVEVPEDVRIGEPVIQLSASDADEHSNHRFELDGGGEGIPFRVDENTGMVFV 2202

HSP 2 Score: 78.9518 bits (193), Expect = 2.150e-14
Identity = 83/279 (29.75%), Postives = 127/279 (45.52%), Query Frame = 1 
Query:  925 FIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPK-ITSLSGNSKI--EINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDY----FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFID 1740
            F I+   G+I     L  +  + Y+F + A         K+ + + I V D ND +P+ IT    N K+  E++    P  + +    D D G N  V+  +L    + F +++   +I SL  +   D E     +  IE  D G P   A   + +HV DIN+  P FE     +K+ EN + G  I+++ A+D+D  A L+YS   E ND     F I+  TG I     +++RE  E     + VTD     K+ +  V I V D NDN P   D
Sbjct: 1598 FTISPFDGTIFTNSPLDFENIKTYRFNITAG--------KSTSQVIIHVTDENDEAPRFITGDVVNLKVLEELDTVSYPLIIGSSIAEDLDEGQNGLVTYSILSGNTSLFAVNSTTGDILSLIPL---DREESSLHELLIEAKDAGIPSLSATSKILIHVGDINDNTPEFELSSYFIKISENSKIGSKIIRILATDKDKDAELQYSL--ESNDEITIPFRINVATGWITVA-GKVNREENEEFRFFVKVTDG---EKSSKVIVEIHVEDFNDNHPMIND 1859

HSP 3 Score: 70.8626 bits (172), Expect = 6.007e-12
Identity = 96/386 (24.87%), Postives = 170/386 (44.04%), Query Frame = 1 
Query:  445 NWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEAC---DTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE-LFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG--SAVLKYSFTGEPNDYFTIDPHTG 1581
            ++P FV+   TV+V E++        ++ L     + + +   I    +    +++S     G++  K  LD E  S+    + A    D           I ++D NDN P F QQ Y+  + EN   G ++I    I +D D  +++   F+E+   +  + F++TE +G I+  + L  + + +Y   V A D       +    + + V D +DN+P+ + +     +E+ E     E +  L  +D D   N         + I  FR+D     ++   S+   D+E ++  + +++  D      +   SL V+VKD+N+ AP FEK      L  + E    I Q  ASD D   +  ++YS T     YF I+P TG
Sbjct: 1944 HFPVFVEKLDTVSVREHD--------EQELAVFKANGDSIRYSIVSRCSDHLEMEKS----TGILKTKSSLDAEEYSECLVFIIATTYFDNKPLSTITKATIKIVDINDNSPRFDQQLYRFNVTEN--SGPKLIG-HVIARDIDRSSRV---FYEIVGGDANHEFMVTE-SGQIESVRDLDRETKSEYHLIVEAIDD-GKPRRRGNTTVIVTVLDEDDNAPRFSRIF---HVEVPEDVRIGEPVIQLSASDADEHSNHRFELDGGGEGI-PFRVDENTGMVFVNDSL---DFEKKQSYRIKVKLTDGAW---LIETSLFVNVKDVNDNAPIFEK---PEYLFISEENSAEIGQFHASDMDSENNGKIRYSVTSP---YFKIEPSTG 2293

HSP 4 Score: 65.855 bits (159), Expect = 2.197e-10
Identity = 64/206 (31.07%), Postives = 98/206 (47.57%), Query Frame = 1 
Query: 1606 LDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTF-IDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVK---KLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVM 2211
            LDRE    I++ II +            ++I+VLD NDN P F ID+  V  I E      +V+    ATD D+ +      ++L    DS     +   F + +S   L ++   KLDRE    Y++ + A D G+P LS+  +  I + D NDN P++        GI ++ +  N  P   +  L ATD D  ENS +TY ++
Sbjct:   81 LDRESENAIDMLIITSPP------SIIHILIDVLDVNDNSPIFPIDVQRV-EIPETAPIGWRVQIS-GATDPDEGKNGTIGKYEL---VDSLATVDTMSPFGIVQSDGFLFLEVTGKLDRETRDLYSMRLTAIDQGVPELSSSCHLNILILDINDNPPNF--------GIRSLTLNWNGLPNTKLFSLNATDLDSNENSLLTYRIL 267

HSP 5 Score: 61.6178 bits (148), Expect = 4.883e-9
Identity = 113/475 (23.79%), Postives = 184/475 (38.74%), Query Frame = 1 
Query: 1021 KMAMAFHKAVANIFIKVKDLNDNSPKITSLSG--------NSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGE-PNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVF--NISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES---GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNI-----TANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQ-----FQLFLRASDNGRPPRHNETSLFIFINGD 2373
            KM       + N+ I + D+NDN PKI +  G        N K+E  + D      +  + D D+  N                L+   + + SL+SI      NE    A I  YD+  P  V    + +  +   +      +D +      N + G  I          S ++ +    +  +D F IDP TG I+S         + +++I  I  D     + G C V I + D+       +  +G F  NISE    +++V G+I                 L    +    RI +  +  T S   G I T   LD E    Y   I A  +   ++       I+V D+ND  P ++T     G +  + +     T + P   +I    A D D G+N  VTYS+++ N  LF +N  TG+  +  L+P+ +      +L + A D G P     + + I + GD
Sbjct: 1342 KMIEPSENRIWNLLIFIADVNDNKPKILNAPGRIIVYDDLNYKLEWEDLDAIASDVSFSIVDGDVFGN----------------LEIEDSGVISLNSI-----PNE-SFNATIRIYDNRPPFKVHFDDVTIEFQVTQKLRAVTCEDAEFWMFFGNEDVGMLI---------ASEIVTWRIVPQIGSDSFKIDPITGIIQSTPNTKPTSDIAKLKIQAISYDG---ERVGFCDVKIHI-DKAAFVENVVLSNGTFEFNISETADRFTEV-GKIVI---------------LGAGLEGSVFRIQDNDYNFTISPFDGTIFTNSPLDFENIKTYRFNITAGKSTSQVI-------IHVTDENDEAPRFIT-----GDVVNLKVLEELDTVSYP--LIIGSSIAEDLDEGQNGLVTYSILSGNTSLFAVNSTTGD--ILSLIPLDREESSLHELLIEAKDAGIPSLSATSKILIHV-GD 1748

HSP 6 Score: 59.3066 bits (142), Expect = 2.263e-8
Identity = 49/184 (26.63%), Postives = 90/184 (48.91%), Query Frame = 1 
Query: 1057 IFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELF-TLQVTDDDIGVNANVSCQLLQQ---YINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD-GSAVLKYSFTGEPNDYFTIDPHTGQIKS 1593
            I + VK LN +SP    +   ++I + E  P   +F  +Q  D+D G++  VS ++L +   Y   F LD+      SL S+++FD E +R    E E  D G+P    +    + ++D+N+  P+F   +    +     +   I+Q + +D D  +  L+Y      +D+F +D  TG++ +
Sbjct:  619 ITLIVKPLNQHSP----ICQITEIHVLENAPIGTIFGRIQARDEDSGLSGVVSYKILTKSDDYDGIFHLDSTSG---SLRSLKAFDAEKKRSYTFEYEAKDLGTPSKTTNCPATIFIEDVNDNVPKFGSRYYTATISGKSNETVAIVQANDNDVDVKNQKLQYHLLNY-HDFFQLDKETGKVTT 794

HSP 7 Score: 55.4546 bits (132), Expect = 3.382e-7
Identity = 172/810 (21.23%), Postives = 301/810 (37.16%), Query Frame = 1 
Query:  112 LFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKS-PFLKLSDKG-DLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGT------FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYG---------FHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-----------RELFTLQVTDDDIGVNANVSCQLL---QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRN-VAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKY--------SFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDE--------NDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHG---GIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN---KLLFILNQVTGELRVARLLPIGQ---FQLFLRASDNGRPPRHNETSLFIFI 2364
            LF   +Q S +T+ F + E++ ++ +IG   HL           +    +K  ++  +L +SS +D E+  A   +       I                 I+I + V D NDN P F    Q V + E  PIG+ + +  A D D      + +Y   +   T      F + QS    + L V   LD E +  Y   L A D    +  ++  L I +LD NDN P+F  +   +      P   ++ ++ A D DS+  + + Y             +SD NI    ++T+N          + +  Q+ +F V A D         + NI + ++  N++ P I        I    +D P           + L  L +TD D  + AN +  +    +Q I  F L  +  +  ++ +++  +  N+ +   E    D  SP + +  K L +           F K + K   +    + H  + V      GS V           SF    +D F IDP  G I +    +  E V    + I +     + +  +  V ++V+ E        +   P  +  +  F   +++ S   V GR+                Q+  T D+    +SE    V   G +   K +  +               LP+   ++N T     Q       V PL+ H     I  +++  N+P G +  ++QA D D G +  V+Y ++  +     +F L+  +G LR  +     +   +     A D G P +       IFI
Sbjct:   20 LFNFTHQFSEETIKFSVSEDAKLNTIIG---HLEAEIGYTYRLSRGNSKIKFDEQTLELSVSSPLDRESENAIDMLIITSPPSI-----------------IHILIDVLDVNDNSPIFPIDVQRVEIPETAPIGWRVQISGATDPDEGKNGTIGKYELVDSLATVDTMSPFGIVQSD-GFLFLEVTGKLDRETRDLYSMRLTAIDQGVPELSSSCHLNILILDINDNPPNFGIRSLTLN-WNGLP-NTKLFSLNATDLDSNENSLLTYRILPSGPTSEMFSISDENI----LVTQN----------NTECLQRCEFVVEARDSGVPPLSTTL-NIVVNMEYGNEHEPNI-------NIRFYPSDYPFIIVQPEDVNGKTLAILSITDSDGPLGANSTIWIENGNEQSI--FSL--ISRQSINILTVKHVENANQEQYILEFRANDGQSPADRITRKELKI-----------FFKKYVKSTQIHVERESH--VTVEKDTVPGSFVAHVETNCTDMCSFELANSDVFKIDPFNGIIVTS--SILPEGVTSYHLPIRIHLPPPSTQLVEADVFVKVIQESVPKNLIRSSESPIHLKRAYTFTTWQDV-SLGTVIGRLPKA-------------QIYSTIDT----VSE--LGVFPDGSVFVGKTITSDF------------VTLPVTLVNRNTT-----QTSIITLIVKPLNQHSPICQITEIHVLENAPIGTIFGRIQARDEDSGLSGVVSYKILTKSDDYDGIFHLDSTSGSLRSLKAFDAEKKRSYTFEYEAKDLGTPSKTTNCPATIFI 728
[Close]
BLAST of Protocadherin vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4])

HSP 1 Score: 122.865 bits (307), Expect = 8.423e-28
Identity = 178/707 (25.18%), Postives = 303/707 (42.86%), Query Frame = 1 
Query:  367 TIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAE----NEPI----GFYLYLDRALDADATSA-NRVHQYIFKEPTGT----FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQA---------LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEA--IDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAE---IECYDHGSPRNVAHKSLNVHVKDINEFAPRF-EKDFQKLKLLENREQGHN----ILQVSASDRDG----SAVLKYSFT------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIE--INIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH-------TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDN 2319
            T+ A D +S  + +    V V D ND  P+F     T  + E    NE +    G  +   +A+D D+    N VH  I  E  G     F +D+    +  +   +  D E    Y  T+EA D +      A         ++I + D NDN PSF +Q+Y   + E+   G  +I ++A  +DK S+L       +H +     R  F +  ++G+I +++ L  +   +Y   + A+D      H A  N++I ++D+NDN+P+       + +   + D P+ LF +  TD D    ++     L+    D  FR   +G    ++  +++ D +    + +    ++  D      V +  + V+V+DIN+ +P F E+ F  ++  ENRE  H+     + V A D D     +A ++Y         GE    F ID +TG+I + +R LDRE+    E  I +   D     + G   V I+V D NDN P F       ++ E     + V    +A D D++  +N   +QL         T D  +++ S  + +V +  +   V + D      + + IR  D       A     + + D+ND+ P        HG      +  + P G  I +  ATD D G+ +    +  ++ K  F ++Q  G LRVA  L    I  + L + A DN
Sbjct: 1181 TLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDEL---TGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLR------YHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASD----GRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFR---IGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIE--ENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGE--SVFRIDQNTGKIFA-MRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMS-FSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRD-----GFHLGIRVSDG---RHDAEAAVHVALVDRNDHAP------HIHGATEH-RVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQ-DGTLRVAHTLDREDIAVYNLIIEAYDN 1849

HSP 2 Score: 96.6709 bits (239), Expect = 8.934e-20
Identity = 152/638 (23.82%), Postives = 258/638 (40.44%), Query Frame = 1 
Query:  451 PKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRL----PSIGLI-VKKPLDYE---VKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQK----------YKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLS------------GNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDY-ENEREIKAEIECYDHG------SPRNVAHKSLNVHVKDINEFAPRFE-----KDFQKLKLLENREQGHNILQVSASDRDGSA----VLKYSFT-GEPNDYFTIDPHTGQIKSGIRRL-DREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ-HTFDSQNRRISEPIFKVT--ESGEILTVKKLDREINHNYTVEIRAFDTGLP-MLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208
            P+F K +  V V+E+  + + +   +A    +    R    I     G    D+++     PS G+I + + LD++   +   +   + A + N++ +   L I + D NDN P+F++  Y  ++ E+ P+ Q I+ V A+DKD              + +N R T+ +  +  SI    ++SAKVR            Y+F V A D        + A I I+ ++ ND S      S            G   I+I   D  R+  T    D     N   +     Q +N F +D     +     + + D  E E  I   +   D G      S  + ++ +L + ++D+N   P F       D  K+     +     I++V A+D D SA    V    +T  E    F ID  TG +      + DRE   R ++ +  TD  + P  G C   +EV+D NDN P F   S   ++S   +  + V   + A D D    N ++ + L+  T   +  +     F++    SGEI  +K +  +    +   + A D G+P  L +    T+ V D+    P W T      GI    +  N     +I++ +A       NS+V Y +
Sbjct:  528 PQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRSFEDGRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNRESHVD-LTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKD--------------TGDNSRITYSVDNHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDK----NGRST-----QKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVI-TVFAFDNDAAH-NAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMK-TQKFIFNVIADDNGIPEALQSSAQVTLNVLDKQQKAPKWQTSPDCKPGI---TVDENVELNKVILRCRAVSSGDSRNSDVIYKL 1135

HSP 3 Score: 68.1662 bits (165), Expect = 4.443e-11
Identity = 86/363 (23.69%), Postives = 151/363 (41.60%), Query Frame = 1 
Query: 1288 IRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLE-NREQGHNILQVSASDRDG---SAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISE-NLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKL----DREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQ-------FQLFLRASDNGRP 2328
            ++  +YE    I A +      S R    +++ +HV DI+E           L ++  N   G  + Q  A D  G   S VL  +    P   F +DP +G +++G  + +R    RI    +     +N  +    V I  +  ++ PP F        +SE NL  YS V  +  +    +D    +    + ++ +          F++  S  I+ + +L    D  +   + +++ A +       +H + TI ++D NDN P +  PL      +T  +  + P    I+K+ A D D G+NS +TYSV N+N   F +N   GE+     L   Q       ++  + A D+G P
Sbjct:  381 LKPLNYEKTSSIIATVPINGLQSTRT---QTIRIHVADIDEPPSFVNSPLPMLAVVPLNPTIGRIVYQFVARDEHGDGDSNVLYKTIDVIPAGSFIVDPKSGVVRTGWSKYERGDTYRISAQAMDLSPSDNTTSQLSEVAILEILADERPPQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRSFED---GRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNR---ESHVDLTIRIDDVNDNVPTFTRPL------YTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHN---FSINS-NGEISAKVRLDADQLNERHFVYRFNVTARDHGEP 724
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0303223)

HSP 1 Score: 191.43 bits (485), Expect = 1.292e-48
Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 
Query:  370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364
            + A D +S QSE    + ++ V V D NDN+P+F +   TV V E++  G     +   RA DAD  +   +   I    T + F++D S    + L+  KPLDYE    Y   + A D  +  + NT  L ++V+D NDN P F   ++Q  +LEN PVG  II V+A D D     +I Y   E  DN       +   TG ++  K L  + + ++ F+V A D   +    A +++ I V+D+NDN P         +  + E  PP    T  VT  D   ++ +  ++              N    ++  +S DY+ E+     +   D G   + A  ++++++ D N FAP FE       + E+   G  +L VSA+D D    A + YS         G P D F+I+P TG I +    LDRE      + +   D   NP     T V I V D NDN P F       +I E+    + V  ++AA+D D   +N ++ + L       +R I +  F +   SG I T K LDRE    + +   A D G P LS+     I +ED ND+ P + +         T+ +  NSP G ++ ++ A DPD G N+ V YS++  +    F L    G  R A+LL + +         F+L +RA+    PP  N+  + I +
Sbjct:  548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210

HSP 2 Score: 168.703 bits (426), Expect = 1.114e-41
Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 
Query:  160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331
            ++EE P    +  +    P  +   Y + S  L    +    + SR  + T  A  +    E+  +    ++A D S   +S +  + V+V D ND+ P F   +   ++ E   +G  +   RA D D    N   +Y  +  T    L Q +   I       G+I  +  LD E    Y   + A D     + ++  T ++++ VLD NDNYP FS++ Y +++ E+   G +   +  + A D D      I Y    +   N ++ F I   +G + L K L  +  + Y+  + A D  + +       + + V D NDN+P+  +      + +        +  +Q  D D G NA ++  + ++  N F L AV      + +I+  D E +     ++   D G P   A  S+ + V+D+N+  P F   + +  + E++  G  +  V+A+D D  + L Y   TG     F I    G+ + +  + LD +  +R  + +  TD+    ++   TV I + D N+  P F +     ++ E+    + V   ++ATD D   +N ++ + L    +S N   S   F +  ++G I+T   LDRE    Y + + A D G P LS   +  I V D NDN P + +PL      +  +I  ++  G  +I++ A+DPD G N  + Y + + +     F+++  +G +R  + L    +  F L   A D G PP
Sbjct:  368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092

HSP 3 Score: 166.007 bits (419), Expect = 7.817e-41
Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 
Query:  451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208
            P F +     +V E +P G  +   RA D  D+     +   +       F +D       G++     LD E+   ++  + A D +   +  T  L+++VLD ND+ P+F  ++++  I E   VG  +I + A D+D     +I YG   ++D      +     F I   +G I  +  L  +    Y   V AAD  +    +  A A++ +KV D NDN P+ +  +   ++  ++     +  +  ++ TD D G NA +   ++     + F +D++  ++   S ++  DYE+ R  +  I   D GSP       L V+V D N+ APRF     +  +LEN   G+NI++V A D D   +A + YS +   +++   +DP TG +++ I+ LDRE   R    ++  D    PK+   +V+I V D NDN P F       N+ E+    + V   + ATD D+D        +L +   + N R    I      G I   + LD +    + + + A D+G    S      I + D N+  P +          ++ ++  ++P G  ++ + ATD D G N+ +TYS+
Sbjct:  357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936

HSP 4 Score: 132.494 bits (332), Expect = 1.357e-30
Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 
Query:  370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848
            ++AKD     +S S ++ ++V D NDN P F       NV E++P G  +    A D D  S  R+H  I    T G F +        GLI + + LDY+ + ++  T+ A D+  + +T  + I++ D N+  P F    Y   + E+ PVG  ++ V A D D  +  +I Y  +E S N +   + F I   TG+I     L  +    Y   V A D    +      ++ I V D+NDN+P   S           L G S I++  +DP            D+G+N  +   L  + I D  F +D     I    + +  D E+           D GSP   +   + + ++D+N+  P F  D   L + EN   G  + ++ A D D    AV+ YS  G + ++ F++    G  ++ +     LD E   +R E+   V  A   P      + I V D NDN P   D   +FN   +     ++ GRI A D D  D+++ ++L
Sbjct:  764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0088214)

HSP 1 Score: 191.43 bits (485), Expect = 1.292e-48
Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 
Query:  370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364
            + A D +S QSE    + ++ V V D NDN+P+F +   TV V E++  G     +   RA DAD  +   +   I    T + F++D S    + L+  KPLDYE    Y   + A D  +  + NT  L ++V+D NDN P F   ++Q  +LEN PVG  II V+A D D     +I Y   E  DN       +   TG ++  K L  + + ++ F+V A D   +    A +++ I V+D+NDN P         +  + E  PP    T  VT  D   ++ +  ++              N    ++  +S DY+ E+     +   D G   + A  ++++++ D N FAP FE       + E+   G  +L VSA+D D    A + YS         G P D F+I+P TG I +    LDRE      + +   D   NP     T V I V D NDN P F       +I E+    + V  ++AA+D D   +N ++ + L       +R I +  F +   SG I T K LDRE    + +   A D G P LS+     I +ED ND+ P + +         T+ +  NSP G ++ ++ A DPD G N+ V YS++  +    F L    G  R A+LL + +         F+L +RA+    PP  N+  + I +
Sbjct:  548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210

HSP 2 Score: 168.703 bits (426), Expect = 1.114e-41
Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 
Query:  160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331
            ++EE P    +  +    P  +   Y + S  L    +    + SR  + T  A  +    E+  +    ++A D S   +S +  + V+V D ND+ P F   +   ++ E   +G  +   RA D D    N   +Y  +  T    L Q +   I       G+I  +  LD E    Y   + A D     + ++  T ++++ VLD NDNYP FS++ Y +++ E+   G +   +  + A D D      I Y    +   N ++ F I   +G + L K L  +  + Y+  + A D  + +       + + V D NDN+P+  +      + +        +  +Q  D D G NA ++  + ++  N F L AV      + +I+  D E +     ++   D G P   A  S+ + V+D+N+  P F   + +  + E++  G  +  V+A+D D  + L Y   TG     F I    G+ + +  + LD +  +R  + +  TD+    ++   TV I + D N+  P F +     ++ E+    + V   ++ATD D   +N ++ + L    +S N   S   F +  ++G I+T   LDRE    Y + + A D G P LS   +  I V D NDN P + +PL      +  +I  ++  G  +I++ A+DPD G N  + Y + + +     F+++  +G +R  + L    +  F L   A D G PP
Sbjct:  368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092

HSP 3 Score: 166.007 bits (419), Expect = 7.817e-41
Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 
Query:  451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208
            P F +     +V E +P G  +   RA D  D+     +   +       F +D       G++     LD E+   ++  + A D +   +  T  L+++VLD ND+ P+F  ++++  I E   VG  +I + A D+D     +I YG   ++D      +     F I   +G I  +  L  +    Y   V AAD  +    +  A A++ +KV D NDN P+ +  +   ++  ++     +  +  ++ TD D G NA +   ++     + F +D++  ++   S ++  DYE+ R  +  I   D GSP       L V+V D N+ APRF     +  +LEN   G+NI++V A D D   +A + YS +   +++   +DP TG +++ I+ LDRE   R    ++  D    PK+   +V+I V D NDN P F       N+ E+    + V   + ATD D+D        +L +   + N R    I      G I   + LD +    + + + A D+G    S      I + D N+  P +          ++ ++  ++P G  ++ + ATD D G N+ +TYS+
Sbjct:  357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936

HSP 4 Score: 132.494 bits (332), Expect = 1.357e-30
Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 
Query:  370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848
            ++AKD     +S S ++ ++V D NDN P F       NV E++P G  +    A D D  S  R+H  I    T G F +        GLI + + LDY+ + ++  T+ A D+  + +T  + I++ D N+  P F    Y   + E+ PVG  ++ V A D D  +  +I Y  +E S N +   + F I   TG+I     L  +    Y   V A D    +      ++ I V D+NDN+P   S           L G S I++  +DP            D+G+N  +   L  + I D  F +D     I    + +  D E+           D GSP   +   + + ++D+N+  P F  D   L + EN   G  + ++ A D D    AV+ YS  G + ++ F++    G  ++ +     LD E   +R E+   V  A   P      + I V D NDN P   D   +FN   +     ++ GRI A D D  D+++ ++L
Sbjct:  764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304899)

HSP 1 Score: 191.045 bits (484), Expect = 1.372e-48
Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 
Query:  370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364
            + A D +S QSE    + ++ V V D NDN+P+F +   TV V E++  G     +   RA DAD  +   +   I    T + F++D S    + L+  KPLDYE    Y   + A D  +  + NT  L ++V+D NDN P F   ++Q  +LEN PVG  II V+A D D     +I Y   E  DN       +   TG ++  K L  + + ++ F+V A D   +    A +++ I V+D+NDN P         +  + E  PP    T  VT  D   ++ +  ++              N    ++  +S DY+ E+     +   D G   + A  ++++++ D N FAP FE       + E+   G  +L VSA+D D    A + YS         G P D F+I+P TG I +    LDRE      + +   D   NP     T V I V D NDN P F       +I E+    + V  ++AA+D D   +N ++ + L       +R I +  F +   SG I T K LDRE    + +   A D G P LS+     I +ED ND+ P + +         T+ +  NSP G ++ ++ A DPD G N+ V YS++  +    F L    G  R A+LL + +         F+L +RA+    PP  N+  + I +
Sbjct:  548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210

HSP 2 Score: 168.318 bits (425), Expect = 1.343e-41
Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 
Query:  160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331
            ++EE P    +  +    P  +   Y + S  L    +    + SR  + T  A  +    E+  +    ++A D S   +S +  + V+V D ND+ P F   +   ++ E   +G  +   RA D D    N   +Y  +  T    L Q +   I       G+I  +  LD E    Y   + A D     + ++  T ++++ VLD NDNYP FS++ Y +++ E+   G +   +  + A D D      I Y    +   N ++ F I   +G + L K L  +  + Y+  + A D  + +       + + V D NDN+P+  +      + +        +  +Q  D D G NA ++  + ++  N F L AV      + +I+  D E +     ++   D G P   A  S+ + V+D+N+  P F   + +  + E++  G  +  V+A+D D  + L Y   TG     F I    G+ + +  + LD +  +R  + +  TD+    ++   TV I + D N+  P F +     ++ E+    + V   ++ATD D   +N ++ + L    +S N   S   F +  ++G I+T   LDRE    Y + + A D G P LS   +  I V D NDN P + +PL      +  +I  ++  G  +I++ A+DPD G N  + Y + + +     F+++  +G +R  + L    +  F L   A D G PP
Sbjct:  368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092

HSP 3 Score: 165.622 bits (418), Expect = 9.107e-41
Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 
Query:  451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208
            P F +     +V E +P G  +   RA D  D+     +   +       F +D       G++     LD E+   ++  + A D +   +  T  L+++VLD ND+ P+F  ++++  I E   VG  +I + A D+D     +I YG   ++D      +     F I   +G I  +  L  +    Y   V AAD  +    +  A A++ +KV D NDN P+ +  +   ++  ++     +  +  ++ TD D G NA +   ++     + F +D++  ++   S ++  DYE+ R  +  I   D GSP       L V+V D N+ APRF     +  +LEN   G+NI++V A D D   +A + YS +   +++   +DP TG +++ I+ LDRE   R    ++  D    PK+   +V+I V D NDN P F       N+ E+    + V   + ATD D+D        +L +   + N R    I      G I   + LD +    + + + A D+G    S      I + D N+  P +          ++ ++  ++P G  ++ + ATD D G N+ +TYS+
Sbjct:  357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936

HSP 4 Score: 132.494 bits (332), Expect = 1.476e-30
Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 
Query:  370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848
            ++AKD     +S S ++ ++V D NDN P F       NV E++P G  +    A D D  S  R+H  I    T G F +        GLI + + LDY+ + ++  T+ A D+  + +T  + I++ D N+  P F    Y   + E+ PVG  ++ V A D D  +  +I Y  +E S N +   + F I   TG+I     L  +    Y   V A D    +      ++ I V D+NDN+P   S           L G S I++  +DP            D+G+N  +   L  + I D  F +D     I    + +  D E+           D GSP   +   + + ++D+N+  P F  D   L + EN   G  + ++ A D D    AV+ YS  G + ++ F++    G  ++ +     LD E   +R E+   V  A   P      + I V D NDN P   D   +FN   +     ++ GRI A D D  D+++ ++L
Sbjct:  764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0300578)

HSP 1 Score: 191.045 bits (484), Expect = 1.372e-48
Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 
Query:  370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364
            + A D +S QSE    + ++ V V D NDN+P+F +   TV V E++  G     +   RA DAD  +   +   I    T + F++D S    + L+  KPLDYE    Y   + A D  +  + NT  L ++V+D NDN P F   ++Q  +LEN PVG  II V+A D D     +I Y   E  DN       +   TG ++  K L  + + ++ F+V A D   +    A +++ I V+D+NDN P         +  + E  PP    T  VT  D   ++ +  ++              N    ++  +S DY+ E+     +   D G   + A  ++++++ D N FAP FE       + E+   G  +L VSA+D D    A + YS         G P D F+I+P TG I +    LDRE      + +   D   NP     T V I V D NDN P F       +I E+    + V  ++AA+D D   +N ++ + L       +R I +  F +   SG I T K LDRE    + +   A D G P LS+     I +ED ND+ P + +         T+ +  NSP G ++ ++ A DPD G N+ V YS++  +    F L    G  R A+LL + +         F+L +RA+    PP  N+  + I +
Sbjct:  548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFAS------DKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210

HSP 2 Score: 168.318 bits (425), Expect = 1.343e-41
Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 
Query:  160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331
            ++EE P    +  +    P  +   Y + S  L    +    + SR  + T  A  +    E+  +    ++A D S   +S +  + V+V D ND+ P F   +   ++ E   +G  +   RA D D    N   +Y  +  T    L Q +   I       G+I  +  LD E    Y   + A D     + ++  T ++++ VLD NDNYP FS++ Y +++ E+   G +   +  + A D D      I Y    +   N ++ F I   +G + L K L  +  + Y+  + A D  + +       + + V D NDN+P+  +      + +        +  +Q  D D G NA ++  + ++  N F L AV      + +I+  D E +     ++   D G P   A  S+ + V+D+N+  P F   + +  + E++  G  +  V+A+D D  + L Y   TG     F I    G+ + +  + LD +  +R  + +  TD+    ++   TV I + D N+  P F +     ++ E+    + V   ++ATD D   +N ++ + L    +S N   S   F +  ++G I+T   LDRE    Y + + A D G P LS   +  I V D NDN P + +PL      +  +I  ++  G  +I++ A+DPD G N  + Y + + +     F+++  +G +R  + L    +  F L   A D G PP
Sbjct:  368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092

HSP 3 Score: 165.622 bits (418), Expect = 9.107e-41
Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 
Query:  451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208
            P F +     +V E +P G  +   RA D  D+     +   +       F +D       G++     LD E+   ++  + A D +   +  T  L+++VLD ND+ P+F  ++++  I E   VG  +I + A D+D     +I YG   ++D      +     F I   +G I  +  L  +    Y   V AAD  +    +  A A++ +KV D NDN P+ +  +   ++  ++     +  +  ++ TD D G NA +   ++     + F +D++  ++   S ++  DYE+ R  +  I   D GSP       L V+V D N+ APRF     +  +LEN   G+NI++V A D D   +A + YS +   +++   +DP TG +++ I+ LDRE   R    ++  D    PK+   +V+I V D NDN P F       N+ E+    + V   + ATD D+D        +L +   + N R    I      G I   + LD +    + + + A D+G    S      I + D N+  P +          ++ ++  ++P G  ++ + ATD D G N+ +TYS+
Sbjct:  357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936

HSP 4 Score: 132.494 bits (332), Expect = 1.476e-30
Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 
Query:  370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848
            ++AKD     +S S ++ ++V D NDN P F       NV E++P G  +    A D D  S  R+H  I    T G F +        GLI + + LDY+ + ++  T+ A D+  + +T  + I++ D N+  P F    Y   + E+ PVG  ++ V A D D  +  +I Y  +E S N +   + F I   TG+I     L  +    Y   V A D    +      ++ I V D+NDN+P   S           L G S I++  +DP            D+G+N  +   L  + I D  F +D     I    + +  D E+           D GSP   +   + + ++D+N+  P F  D   L + EN   G  + ++ A D D    AV+ YS  G + ++ F++    G  ++ +     LD E   +R E+   V  A   P      + I V D NDN P   D   +FN   +     ++ GRI A D D  D+++ ++L
Sbjct:  764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
[Close]
BLAST of Protocadherin vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304900)

HSP 1 Score: 191.045 bits (484), Expect = 1.482e-48
Identity = 204/696 (29.31%), Postives = 316/696 (45.40%), Query Frame = 1 
Query:  370 IMAKDKSSDQSE----SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFKEPTGT-FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-------GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPIGQ---------FQLFLRASDNGRPPRHNETSLFIFI 2364
            + A D +S QSE    + ++ V V D NDN+P+F +   TV V E++  G     +   RA DAD  +   +   I    T + F++D S    + L+  KPLDYE    Y   + A D  +  + NT  L ++V+D NDN P F   ++Q  +LEN PVG  II V+A D D     +I Y   E  DN       +   TG ++  K L  + + ++ F+V A D   +    A +++ I V+D+NDN P         +  + E  PP    T  VT  D   ++ +  ++              N    ++  +S DY+ E+     +   D G   + A  ++++++ D N FAP FE       + E+   G  +L VSA+D D    A + YS         G P D F+I+P TG I +    LDRE      + +   D   NP     T V I V D NDN P F       +I E+    + V  ++AA+D D   +N ++ + L       +R I +  F +   SG I T K LDRE    + +   A D G P LS+     I +ED ND+ P + +         T+ +  NSP G ++ ++ A DPD G N+ V YS++  +    F L    G  R A+LL + +         F+L +RA+    PP  N+  + I +
Sbjct:  548 VTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID-SMSGDVSLV--KPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN---FPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDG-GVPPKSASSSVVITVQDVNDNDPAFN--PKYYEANVGEDQPPGTPVT-TVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTA--TVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSP-DPFSINPQTGAIVTNA-PLDRETTSGYLLTVTAKDG-GNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVI-QVAASDPDVG-LNGRIKYLL------SDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKI------TLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSER-AQLLTMTELDYESTRKRFELVVRAAS---PPLRNDAHIEILV 1210

HSP 2 Score: 168.318 bits (425), Expect = 1.332e-41
Identity = 183/749 (24.43%), Postives = 327/749 (43.66%), Query Frame = 1 
Query:  160 IMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI-------GLI-VKKPLDYEVKSQYFATLEACD-----TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ---IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVT-ESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN--KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331
            ++EE P    +  +    P  +   Y + S  L    +    + SR  + T  A  +    E+  +    ++A D S   +S +  + V+V D ND+ P F   +   ++ E   +G  +   RA D D    N   +Y  +  T    L Q +   I       G+I  +  LD E    Y   + A D     + ++  T ++++ VLD NDNYP FS++ Y +++ E+   G +   +  + A D D      I Y    +   N ++ F I   +G + L K L  +  + Y+  + A D  + +       + + V D NDN+P+  +      + +        +  +Q  D D G NA ++  + ++  N F L AV      + +I+  D E +     ++   D G P   A  S+ + V+D+N+  P F   + +  + E++  G  +  V+A+D D  + L Y   TG     F I    G+ + +  + LD +  +R  + +  TD+    ++   TV I + D N+  P F +     ++ E+    + V   ++ATD D   +N ++ + L    +S N   S   F +  ++G I+T   LDRE    Y + + A D G P LS   +  I V D NDN P + +PL      +  +I  ++  G  +I++ A+DPD G N  + Y + + +     F+++  +G +R  + L    +  F L   A D G PP
Sbjct:  368 VLEEQPAGAAVTTVRARDPEDSPVVYSMVS-LLDSRSQSLFKVDSRTGVVTTSASLD---RELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQD-IGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYA---IIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPS-RSNTTQLLVNVIDANDNAPRFYTSQFQESV-LENVPVGYNIIRVQAYDSDEGANAEITYSISERDDN-FPL-AVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDS--GGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVL-VVSATDSDVG-VNAQITYSLNE--ESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPL------YQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP 1092

HSP 3 Score: 165.622 bits (418), Expect = 9.187e-41
Identity = 155/604 (25.66%), Postives = 271/604 (44.87%), Query Frame = 1 
Query:  451 PKFVKPKQTVNVAENEPIGFYLYLDRALDA-DATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSD------NNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHK--AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSV 2208
            P F +     +V E +P G  +   RA D  D+     +   +       F +D       G++     LD E+   ++  + A D +   +  T  L+++VLD ND+ P+F  ++++  I E   VG  +I + A D+D     +I YG   ++D      +     F I   +G I  +  L  +    Y   V AAD  +    +  A A++ +KV D NDN P+ +  +   ++  ++     +  +  ++ TD D G NA +   ++     + F +D++  ++   S ++  DYE+ R  +  I   D GSP       L V+V D N+ APRF     +  +LEN   G+NI++V A D D   +A + YS +   +++   +DP TG +++ I+ LDRE   R    ++  D    PK+   +V+I V D NDN P F       N+ E+    + V   + ATD D+D        +L +   + N R    I      G I   + LD +    + + + A D+G    S      I + D N+  P +          ++ ++  ++P G  ++ + ATD D G N+ +TYS+
Sbjct:  357 PYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPVVYSMVSLLDSRSQSLFKVDSR----TGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDV---SLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQT-IKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVT-TVTATDPDEDS-------RLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSG--GRSDTATVHINITDANNFAPIF------ENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL 936

HSP 4 Score: 132.494 bits (332), Expect = 1.514e-30
Identity = 140/519 (26.97%), Postives = 225/519 (43.35%), Query Frame = 1 
Query:  370 IMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR--NTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITS-----------LSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTG-EPNDYFTIDPHTGQIKSGI---RRLDREMV-ERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKD-KDEINNKVL 1848
            ++AKD     +S S ++ ++V D NDN P F       NV E++P G  +    A D D  S  R+H  I    T G F +        GLI + + LDY+ + ++  T+ A D+  + +T  + I++ D N+  P F    Y   + E+ PVG  ++ V A D D  +  +I Y  +E S N +   + F I   TG+I     L  +    Y   V A D    +      ++ I V D+NDN+P   S           L G S I++  +DP            D+G+N  +   L  + I D  F +D     I    + +  D E+           D GSP   +   + + ++D+N+  P F  D   L + EN   G  + ++ A D D    AV+ YS  G + ++ F++    G  ++ +     LD E   +R E+   V  A   P      + I V D NDN P   D   +FN   +     ++ GRI A D D  D+++ ++L
Sbjct:  764 VVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDS--RLHYEITTGNTRGRFAITSQN--GRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTT-DVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDP------------DVGLNGRIKYLLSDRDIEDGSFVIDPTSGTI---RTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFEL---VVRAASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHFPSGEI-GRIPAFDADVSDKLHYRIL 1258
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 257.299 bits (656), Expect = 1.620e-70
Identity = 235/798 (29.45%), Postives = 364/798 (45.61%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C+       Q + + I EE   +++IGNI       H++ +    S  +         +P L+ +S+ G++  +S RID E +C     +   C  E+E ++          +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N VH+Y        F LD    P       LIV++ LD E K  Y   ++  D    ++ +T  L++ V D NDN P F + + ++ I EN PVG  ++ ++A D D     +I Y F        R  F +   TG I +Q+ L  +    +K  V A+D  +     A A I I V D+NDN+P I         N  + ++E DP   ++  + V+D D  VN  V C + +     F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L ++EN  +   +  +SA+D D     +  +   PN  +F +D  TG + +  R  DRE  ER    +   D        Q  VI+ +LDENDN P F      F +SENL  YS V G I  TD D  E     + +L    D++N  I +P     +SG I +    DRE   +YT ++RA D G P  S+    TI V D NDN P  + P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ N + LF ++ VTG + +     +  IG  +L +  SD G P   H    +F+F+N
Sbjct:    5 DFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVIL--------PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSS---SPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVRLSILNDNEN-FILDP-----DSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLSAI--PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHTLVLVFLFVN 774
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: CR847522.1 (pep chromosome:GRCz11:CHR_ALT_CTG6_1_1:4874141:4879379:1 gene:ENSDARG00000111493.1 transcript:ENSDART00000185190.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR847522.1)

HSP 1 Score: 257.684 bits (657), Expect = 2.077e-70
Identity = 235/794 (29.60%), Postives = 364/794 (45.84%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C+       Q + + I EE   +++IGNI       H++ +    S  +         +P L+ +S+ G++  +S RID E +C       E+ EC  +  ++     +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N VH+Y        F LD    P       LIV++ LD E K  Y   ++  D    ++ +T  L++ V D NDN P F + + ++ I EN PVG  ++ ++A D D     +I Y F        R  F +   TG I +Q+ L  +    +K  V A+D  +     A A I I V D+NDN+P I         N  + ++E DP   ++  + V+D D  VN  V C + +     F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L ++EN  +   +  +SA+D D     +  +   PN  +F +D  TG + +  R  DRE  ER    +   D        Q  VI+ +LDENDN P F      F +SENL  YS V G I  TD D  E     + +L    D++N  I +P     +SG I +    DRE   +YT ++RA D G P  S+    TI V D NDN P  + P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ N + LF ++ VTG + +     +  IG  +L +  SD G P   H    +F+F+N
Sbjct:    5 DFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSF--EDSECSFEIEVVIL--PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSS---SPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVRLSILNDNEN-FILDP-----DSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLSAI--PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHTLVLVFLFVN 774
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 256.914 bits (655), Expect = 3.563e-70
Identity = 235/798 (29.45%), Postives = 364/798 (45.61%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C+       Q + + I EE   +++IGNI       H++ +    S  +         +P L+ +S+ G++  +S RID E +C     +   C  E+E ++          +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N VH+Y        F LD    P       LIV++ LD E K  Y   ++  D    ++ +T  L++ V D NDN P F + + ++ I EN PVG  ++ ++A D D     +I Y F        R  F +   TG I +Q+ L  +    +K  V A+D  +     A A I I V D+NDN+P I         N  + ++E DP   ++  + V+D D  VN  V C + +     F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L ++EN  +   +  +SA+D D     +  +   PN  +F +D  TG + +  R  DRE  ER    +   D        Q  VI+ +LDENDN P F      F +SENL  YS V G I  TD D  E     + +L    D++N  I +P     +SG I +    DRE   +YT ++RA D G P  S+    TI V D NDN P  + P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ N + LF ++ VTG + +     +  IG  +L +  SD G P   H    +F+F+N
Sbjct:    5 DFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVIL--------PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSS---SPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVRLSILNDNEN-FILDP-----DSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLSAI--PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHTLVLVFLFVN 774
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 256.914 bits (655), Expect = 3.563e-70
Identity = 235/798 (29.45%), Postives = 364/798 (45.61%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C+       Q + + I EE   +++IGNI       H++ +    S  +         +P L+ +S+ G++  +S RID E +C     +   C  E+E ++          +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N VH+Y        F LD    P       LIV++ LD E K  Y   ++  D    ++ +T  L++ V D NDN P F + + ++ I EN PVG  ++ ++A D D     +I Y F        R  F +   TG I +Q+ L  +    +K  V A+D  +     A A I I V D+NDN+P I         N  + ++E DP   ++  + V+D D  VN  V C + +     F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L ++EN  +   +  +SA+D D     +  +   PN  +F +D  TG + +  R  DRE  ER    +   D        Q  VI+ +LDENDN P F      F +SENL  YS V G I  TD D  E     + +L    D++N  I +P     +SG I +    DRE   +YT ++RA D G P  S+    TI V D NDN P  + P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ N + LF ++ VTG + +     +  IG  +L +  SD G P   H    +F+F+N
Sbjct:    5 DFFLLATLVACFWLDPTIAQELIYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVIL--------PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSS---SPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVRLSILNDNEN-FILDP-----DSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLSAI--PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHTLVLVFLFVN 774
[Close]
BLAST of Protocadherin vs. Ensembl Zebrafish
Match: CT030123.1 (protocadherin 1b [Source:NCBI gene;Acc:572016])

HSP 1 Score: 250.751 bits (639), Expect = 3.110e-68
Identity = 232/817 (28.40%), Postives = 369/817 (45.17%), Query Frame = 1 
Query:   22 FQHFYMFQCLLNSLKF*KLLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVECILKTTIMAKD-KSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSG-------NSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFR-LDAVGNE---IYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGE--PNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVAR-LLP--IGQFQLFLRASDNGRPPRHNETSLFIFIN 2367
             +HF   Q LL+S  F   +        I L   C      T+ +++ EE P + +IG++       +    +   + +P+L++  K GD+  + + ID E++     +  E   C L+  +   D         I   + + D+NDN P+F  P  T+++ EN  +G    +  A D D+ S N +  Y      E T  F+L  +     +LP   LIV   LD E++  Y   ++  D     + ++  L I + D NDN P F +  Y+ E+ EN PVG  ++ V+A D D     ++ Y  H+ S   +R    I  NTG I ++  +  +     KF V A D    +   + A + I VKD NDN+P I  + G       +    I+E  P      L +V+D D G NA V+C +        R     GN+    Y L +    DYE  +E + EI   D G+P   +  SL V V D+N+ AP F     +++  E  + G  +L V A+D D    A L YS TG   P   F I+P+TG+++  + +LDRE ++  +  +   D       G  TV+++VLD NDN P F+     F++ EN+   S V G +   D D+ E N +V  QL    D+    I    +       IL+    DRE    Y+  ++A D G P  S++   TI V D+NDN P    P +S        +   + P   +  ++A D D G NS + ++++  N          GE+ +A+   P  IG  +L ++  D G PPR     + I++N
Sbjct:   17 LRHFSPLQPLLHSALFNYAM-----LVWILLLLCCSANVVNTILYQVTEEQPPNTLIGSLASDQGLPDTGHLYKLEVGAPYLRVDGKTGDIYTTENSIDRESLKDCRNLF-EGDPCFLEFEVSITDLMKGTGPRLIEGRIEILDENDNTPQFSSPVLTLSIPENTHVGALFAIPVATDRDSGS-NGIADYALTTGPEATNLFSLQVAQDSDEKLPQ--LIVLGNLDRELRDSYDLNIKVVDGGSPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEVTYSLHQPSSPVMR-LLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQS-KSSKALVTITVKDQNDNAPSI-RIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTLLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPTLYEVEFFEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRV-MSQLDREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPV-GMVTVNDHDEGE-NARV--QLSVEPDNGKFMIQNGTYT------ILSTISFDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPANSSYKF----LDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGNPHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVN 806

HSP 2 Score: 93.9745 bits (232), Expect = 7.598e-19
Identity = 150/653 (22.97%), Postives = 264/653 (40.43%), Query Frame = 1 
Query:  388 SSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSI----GLI-VKKPLDYEVKSQYFATLEACDTNKQC-NTQAL-EIHVLDQNDNYPSF--------SQQEYQIEILENFPVGQQIIAVEAIDKDSD---LFNKIIYG--------FHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEP-NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDK----DKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQ-ATDPDYGEN--SNVTYSVMNNNKLLFIL 2238
            S  +  S  + ++++D NDN PKF +      + EN P+G  +   +A D+D      V  Y   +P+        RL SI    G+I VK  +D E  S     ++A D   Q  +++AL  I V DQNDN PS         + ++    I E+ PVG  +  VE  D+D     +   ++ G          E  ++  R  F+ T           L  +  ++Y+ ++ A D    A   +  ++ ++V D+NDN+P  +      +    E  P  ++  +  TD D G NA ++  +    + +  F ++    E+  +S +   D E     +  +   D G P      ++ V V D N+  P+F  +     + EN      +  V+ +D D     +   + EP N  F I   T  I S I   DRE        +   D  + P++    + I VLDENDN P     +         SSY  +  R +        + ++I+  +  +L       N      +F+++  GEI   K+   +    + + ++  D G P         IYV +   N    V+        H   +  +S   Y  +++  A DPDY  +  SN+ ++V+    ++ ++
Sbjct:  251 SPPRQSSALLRITITDANDNVPKFERSHYEGELPENSPVGHSVLQVKANDSDMGPNGEV-TYSLHQPSSPV----MRLLSIDRNTGIIFVKGSVDREEISILKFYVQAKDNGPQSKSSKALVTITVKDQNDNAPSIRIRGIGLVTHEDGVANISEDMPVGTAVALVEVSDRDEGENAVVTCVVAGDVPFQLRSASETGNDRKRKYFLQTTTL--------LDYERIKEYRIEIVAVDSGNPAL-SSTNSLKVQVTDMNDNAPVFSPTLYEVEF-FEENQPGDKVLDVVATDADSGTNAELTYSITGGSVPEGLFEINPNTGEVRVMSQL---DREQLDHYQFLVAAADKGVPSLRGTATVVVKVLDRNDNDPKFMLNGYSFSVQENMPPLSPVGMVTVNDHDEGENARVQLSVEPDNGKFMIQNGTYTILSTIS-FDREKESTYSFRLKAVDGGDPPRSSYVGITINVLDENDNAPYVTKPAN--------SSYKFLDPRTSPETHVESVEAEDIDIGLNSELDFNIVGGN---PHGLFRISSEGEITLAKEFTPKHIGLHRLVVKVKDKGTPPRQTTALVHIYVNETIGN----VS--------HVEGLVGHSL--YTPLEMDIAGDPDYSRDPHSNILFAVLGGFSVVILI 859
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 271.166 bits (692), Expect = 7.038e-75
Identity = 244/815 (29.94%), Postives = 385/815 (47.24%), Query Frame = 1 
Query:   55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGN------EIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            NSLK    ++     C ++LF+ L   GS   V +++ EE P +++IG++   +  +  + +  K     P+L++  K GD+  + + ID E++     +   E +C L+  +   D  S     ++  + + D NDN P F  P  T+++ EN  IG    +  A D D +  N V  Y   +  E    F L    DQ  + P   LIV   LD E +  Y  T++  D  T  + ++  L I +LD NDN P F +  Y+ E+ EN P+G  ++ V+A D D  +  +I Y FH+ SD  +R    +  +TG I +Q  +  +     KF V A DK A     A   + I ++D NDN P I        T   G + I     D P E  +  +QV+D D GVNA V+C +       F+L  V +      + Y L +  + DYE+ +E   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN +    +++VSA+D D    + L YS   +P+    F+I+P +GQI+     LDRE  E  + +++  D       G  +V+I VLD NDN P F+     F++ EN+   S V G +   D DK E N  +   ++     F  QN            +G IL+    DRE    YT  ++A D G P  S++   TI V D+NDN P  V P      I    +T  + PG  +  ++A D D G N+ + YS+ + N   LF ++   GE+ + + +     G  +L ++ +D G+P RH    +  +IN
Sbjct:   39 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRECQNLEPGE-KCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRD-SGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDV--PFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQNG-----------TGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 821
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 270.781 bits (691), Expect = 1.040e-74
Identity = 246/817 (30.11%), Postives = 387/817 (47.37%), Query Frame = 1 
Query:   55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSC--------QLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            NSLK    ++     C ++LF+ L   GS   V +++ EE P +++IG++   +  +  + +  K     P+L++  K GD+  + + ID E++     +   E +C L+  +   D  S     ++  + + D NDN P F  P  T+++ EN  IG    +  A D D +  N V  Y   +  E    F L    DQ  + P   LIV   LD E +  Y  T++  D  T  + ++  L I +LD NDN P F +  Y+ E+ EN P+G  ++ V+A D D  +  +I Y FH+ SD  +R    +  +TG I +Q  +  +     KF V A DK A     A   + I ++D NDN P I        T   G + I     D P E  +  +QV+D D GVNA V+C        QL Q  ++D   D+   + Y L +  + DYE+ +E   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN +    +++VSA+D D    + L YS   +P+    F+I+P +GQI+     LDRE  E  + +++  D       G  +V+I VLD NDN P F+     F++ EN+   S V G +   D DK E N  +   ++     F  QN            +G IL+    DRE    YT  ++A D G P  S++   TI V D+NDN P  V P      I    +T  + PG  +  ++A D D G N+ + YS+ + N   LF ++   GE+ + + +     G  +L ++ +D G+P RH    +  +IN
Sbjct:   39 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRECQNLEPGE-KCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRD-SGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ--VSDTGSDS--KKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQN-----------GTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 821
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 271.166 bits (692), Expect = 2.001e-74
Identity = 246/817 (30.11%), Postives = 387/817 (47.37%), Query Frame = 1 
Query:   55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSC--------QLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            NSLK    ++     C ++LF+ L   GS   V +++ EE P +++IG++   +  +  + +  K     P+L++  K GD+  + + ID E++     +   E +C L+  +   D  S     ++  + + D NDN P F  P  T+++ EN  IG    +  A D D +  N V  Y   +  E    F L    DQ  + P   LIV   LD E +  Y  T++  D  T  + ++  L I +LD NDN P F +  Y+ E+ EN P+G  ++ V+A D D  +  +I Y FH+ SD  +R    +  +TG I +Q  +  +     KF V A DK A     A   + I ++D NDN P I        T   G + I     D P E  +  +QV+D D GVNA V+C        QL Q  ++D   D+   + Y L +  + DYE+ +E   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN +    +++VSA+D D    + L YS   +P+    F+I+P +GQI+     LDRE  E  + +++  D       G  +V+I VLD NDN P F+     F++ EN+   S V G +   D DK E N  +   ++     F  QN            +G IL+    DRE    YT  ++A D G P  S++   TI V D+NDN P  V P      I    +T  + PG  +  ++A D D G N+ + YS+ + N   LF ++   GE+ + + +     G  +L ++ +D G+P RH    +  +IN
Sbjct:   39 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRECQNLEPGE-KCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRD-SGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ--VSDTGSDS--KKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQN-----------GTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 821
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 271.552 bits (693), Expect = 2.303e-74
Identity = 245/819 (29.91%), Postives = 386/819 (47.13%), Query Frame = 1 
Query:   55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVE----CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGN------EIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            NSLK    ++     C ++LF+ L   GS   V +++ EE P +++IG++   +  +  + +  K     P+L++  K GD+  + + ID E++       C+ +E    C L+  +   D  S     ++  + + D NDN P F  P  T+++ EN  IG    +  A D D+   N V  Y   +  E    F L    DQ  + P   LIV   LD E +  Y  T++  D  T  + ++  L I +LD NDN P F +  Y+ E+ EN P+G  ++ V+A D D  +  +I Y FH+ SD  +R    +  +TG I +Q  +  +     KF V A DK A     A   + I ++D NDN P I        T   G + I     D P E  +  +QV+D D GVNA V+C +       F+L  V +      + Y L +  + DYE+ +E   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN +    +++VSA+D D    + L YS   +P+    F+I+P +GQI+     LDRE  E  + +++  D       G  +V+I VLD NDN P F+     F++ EN+   S V G +   D DK E N  +   ++     F  QN            +G IL+    DRE    YT  ++A D G P  S++   TI V D+NDN P  V P      I    +T  + PG  +  ++A D D G N+ + YS+ + N   LF ++   GE+ + + +     G  +L ++ +D G+P RH    +  +IN
Sbjct:   31 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRE-----CQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDS-GVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDV--PFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQNG-----------TGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 813
[Close]
BLAST of Protocadherin vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220])

HSP 1 Score: 271.552 bits (693), Expect = 2.478e-74
Identity = 247/821 (30.09%), Postives = 388/821 (47.26%), Query Frame = 1 
Query:   55 NSLKF*KLLEMKIDFCIIFLFY-LCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVE----CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY---IFKEPTGTFNL----DQ-SRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRE--LFTLQVTDDDIGVNANVSC--------QLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            NSLK    ++     C ++LF+ L   GS   V +++ EE P +++IG++   +  +  + +  K     P+L++  K GD+  + + ID E++       C+ +E    C L+  +   D  S     ++  + + D NDN P F  P  T+++ EN  IG    +  A D D+   N V  Y   +  E    F L    DQ  + P   LIV   LD E +  Y  T++  D  T  + ++  L I +LD NDN P F +  Y+ E+ EN P+G  ++ V+A D D  +  +I Y FH+ SD  +R    +  +TG I +Q  +  +     KF V A DK A     A   + I ++D NDN P I        T   G + I     D P E  +  +QV+D D GVNA V+C        QL Q  ++D   D+   + Y L +  + DYE+ +E   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN +    +++VSA+D D    + L YS   +P+    F+I+P +GQI+     LDRE  E  + +++  D       G  +V+I VLD NDN P F+     F++ EN+   S V G +   D DK E N  +   ++     F  QN            +G IL+    DRE    YT  ++A D G P  S++   TI V D+NDN P  V P      I    +T  + PG  +  ++A D D G N+ + YS+ + N   LF ++   GE+ + + +     G  +L ++ +D G+P RH    +  +IN
Sbjct:   39 NSLKL--AMKRTATACFLWLFFQLPILGSSTKVAYRVPEEQPPNILIGSLASDY-GYPDSKHLYKLELGHPYLRVDGKTGDIYTTETSIDRESLRE-----CQNLEPGEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDS-GVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQ--LIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASD-TVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANP-KTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANI---SEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQ--VSDTGSDS--KKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNT-VLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPV-GMVTVIDADKGE-NAHIHLSVEPESGEFVIQNG-----------TGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP----SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 821
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692])

HSP 1 Score: 261.922 bits (668), Expect = 5.627e-72
Identity = 232/783 (29.63%), Postives = 365/783 (46.62%), Query Frame = 1 
Query:  148 VTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVE---CILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            V +K+ EE P + +IG++   +   +    +   + +P+L++  K GD+  + + ID E +      C  ++    CIL+  +   D   + S  +    + V D NDN P F  P  T+ + EN  IG    +  A D DA   N V  Y  +   E    F L      + + P   LIV   LD E    Y  T++  D     + ++  L + VLD NDN P F +  Y+ E+ EN P+G  +I V+A D D     +I Y FH+  +  +R    +  NTG I +Q  +  +     +F V A D+ A     A A + + VKD+NDN+P I        T   G + I  +  +    +  +QV+D D G NA V+C +        R      +   + Y L +    DYE  ++   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN + G  + +V+ASD D    A L YS   EP     FTI P  G+I+     LDRE  +  E+ ++  D       G  TV++ VLD NDN P F+ +SG  F++ EN+ + S V G +   D DK E N +V   ++     F  QN            +G IL+    DRE    YT +++A D G+P  SA+   TI V D+NDN P    P ++    H + +T  +  G  + ++ A D D G N+ +TYS+   N   LF +   +G + + + +     G  +L ++ SD G+PPR+    + +++N
Sbjct:   38 VVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL----RECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGATP-KSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKT-SLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NARVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTS---HRL-LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 791
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh1 (protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692])

HSP 1 Score: 261.922 bits (668), Expect = 5.627e-72
Identity = 232/783 (29.63%), Postives = 365/783 (46.62%), Query Frame = 1 
Query:  148 VTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLS-SRIDLETICAQHEMCCEEVE---CILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            V +K+ EE P + +IG++   +   +    +   + +P+L++  K GD+  + + ID E +      C  ++    CIL+  +   D   + S  +    + V D NDN P F  P  T+ + EN  IG    +  A D DA   N V  Y  +   E    F L      + + P   LIV   LD E    Y  T++  D     + ++  L + VLD NDN P F +  Y+ E+ EN P+G  +I V+A D D     +I Y FH+  +  +R    +  NTG I +Q  +  +     +F V A D+ A     A A + + VKD+NDN+P I        T   G + I  +  +    +  +QV+D D G NA V+C +        R      +   + Y L +    DYE  ++   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN + G  + +V+ASD D    A L YS   EP     FTI P  G+I+     LDRE  +  E+ ++  D       G  TV++ VLD NDN P F+ +SG  F++ EN+ + S V G +   D DK E N +V   ++     F  QN            +G IL+    DRE    YT +++A D G+P  SA+   TI V D+NDN P    P ++    H + +T  +  G  + ++ A D D G N+ +TYS+   N   LF +   +G + + + +     G  +L ++ SD G+PPR+    + +++N
Sbjct:   38 VVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL----RECQNQIPGNPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLATDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPKFERPTYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGATP-KSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEIRVKT-SLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NARVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTS---HRL-LTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 791
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801])

HSP 1 Score: 254.218 bits (648), Expect = 3.482e-70
Identity = 238/794 (29.97%), Postives = 367/794 (46.22%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C +      Q + + I EE P ++ IGNI       H++ +   ++  +         +P +K+S   G++  +S RID E +CA      EE EC  +  ++     +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N V  Y        F LD    P       LIV++ LD E K  Y   ++  D  T ++ +T  L++ V D NDN P F + + ++ I EN PVG  +I + A D D     +I Y F        +  F +   TG I +Q+ L  +    +K  V A+D  +     A A + I V D+NDN P I         N  + ++E DP   ++  + V+D D  VN  V C + ++    F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L + EN  +G  +  +SA+D D        +   PN  +F +D  TG + +  R  +RE  ER    +   D    P   Q  VI+ VLDENDN P F      F +SENL  YS V G I  TD+D  E N  V   + +  D++N  + +P      SG I +    DRE   +YT +++A D G P  S+    TI V D NDN P  ++P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + +  +  P  +G  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTAS-RVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDEDAGE-NKAVTLSILN--DNEN-FVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSA--IPGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVN 775
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801])

HSP 1 Score: 254.218 bits (648), Expect = 7.814e-69
Identity = 238/794 (29.97%), Postives = 367/794 (46.22%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C +      Q + + I EE P ++ IGNI       H++ +   ++  +         +P +K+S   G++  +S RID E +CA      EE EC  +  ++     +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N V  Y        F LD    P       LIV++ LD E K  Y   ++  D  T ++ +T  L++ V D NDN P F + + ++ I EN PVG  +I + A D D     +I Y F        +  F +   TG I +Q+ L  +    +K  V A+D  +     A A + I V D+NDN P I         N  + ++E DP   ++  + V+D D  VN  V C + ++    F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L + EN  +G  +  +SA+D D        +   PN  +F +D  TG + +  R  +RE  ER    +   D    P   Q  VI+ VLDENDN P F      F +SENL  YS V G I  TD+D  E N  V   + +  D++N  + +P      SG I +    DRE   +YT +++A D G P  S+    TI V D NDN P  ++P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + +  +  P  +G  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDEDAGE-NKAVTLSILN--DNEN-FVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVN 775
[Close]
BLAST of Protocadherin vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801])

HSP 1 Score: 254.218 bits (648), Expect = 7.814e-69
Identity = 238/794 (29.97%), Postives = 367/794 (46.22%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C +      Q + + I EE P ++ IGNI       H++ +   ++  +         +P +K+S   G++  +S RID E +CA      EE EC  +  ++     +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N V  Y        F LD    P       LIV++ LD E K  Y   ++  D  T ++ +T  L++ V D NDN P F + + ++ I EN PVG  +I + A D D     +I Y F        +  F +   TG I +Q+ L  +    +K  V A+D  +     A A + I V D+NDN P I         N  + ++E DP   ++  + V+D D  VN  V C + ++    F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L + EN  +G  +  +SA+D D        +   PN  +F +D  TG + +  R  +RE  ER    +   D    P   Q  VI+ VLDENDN P F      F +SENL  YS V G I  TD+D  E N  V   + +  D++N  + +P      SG I +    DRE   +YT +++A D G P  S+    TI V D NDN P  ++P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + +  +  P  +G  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDEDAGE-NKAVTLSILN--DNEN-FVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHTLVLVFLYVN 775
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q08174|PCDH1_HUMAN (Protocadherin-1 OS=Homo sapiens OX=9606 GN=PCDH1 PE=1 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 2.091e-71
Identity = 236/788 (29.95%), Postives = 368/788 (46.70%), Query Frame = 1 
Query:  133 GSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIK----SPFLKLSDK-GDLMLS-SRIDLETI--CAQHEMCCEEVECILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI--------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGV-FNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQH---TFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            G    V +K+ EE P + +IG++   +  F    +  K    +P+L++  K GD+  + + ID E +  C Q+++  +   CIL+  +   D   + S  +    + V D NDN P F  P  T+ + EN  IG    +  A D DA   N V  Y  +   E    F L      + + P   LIV   LD E    Y  T++  D     + ++  L + VLD NDN P F +  Y+ E+ EN P+G  +I V+A D D     +I Y FH+  +  +R    +  NTG I +Q  +  +     +F V A D+       A A + + VKD+NDN+P I        T   G + I  +  +    +  +QV+D D G NA V+C +        R      +   + Y L +    DYE  ++   EI   D G+P   +  SL V V D+N+ AP F +   ++   EN + G  I +++ASD D    A L YS   EP     FTI P TG+I+     LDRE  E  E+ ++  D       G  TV++ VLD NDN P F+ +SG  F++ EN+ + S V G +   D DK E N +V   ++     F  QN            +G IL+    DRE    YT +++A D G+P  SA+   TI V D+NDN P    P ++    H + +T  +  G  + ++ A D D G N+ + YS+   N   LF +   +G + + + +     G  +L ++ SD G+PPR+    + +++N
Sbjct:   55 GHATRVVYKVPEEQPPNTLIGSLAADY-GFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLREC-QNQLPGDP--CILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDA-GPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQ--LIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIEYTFHQAPEV-VRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDR-GTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEE-TAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAELVYSLEPEPAAKGLFTISPETGEIQVKT-SLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM-LSGYNFSVMENMPALSPV-GMVTVIDGDKGE-NAQVQLSVEQDNGDFVIQNG-----------TGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSNTS---HKL-LTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVN 813
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q9HC56|PCDH9_HUMAN (Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.468e-68
Identity = 237/794 (29.85%), Postives = 363/794 (45.72%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C +      Q + + I EE P ++ IGNI       H++ +   ++  +         +P +K+S   G++  +S RID E +CA      EE EC  +  ++     +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N V  Y        F LD    P       LIV++ LD E K  Y   ++  D  T ++ +T  L++ V D NDN P F + + ++ I EN PVG  +I + A D D     +I Y F        +  F +   TG I +Q+ L  +    +K  V A+D  +     A A + I V D+NDN P I         N  + ++E DP   ++  + V+D D  VN  V C + ++    F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L + EN  +G  +  +SA+D D        +   PN  +F +D  TG + +  R  DRE  ER    +   D    P   Q  VI+ VLDENDN P F      F +SENL  YS V G I  TD D  E N  V   +    +  +  + +P      SG I +    DRE   +YT +++A D G P  S+    TI V D NDN P  ++P  S+     V ++A   PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + +  +  P  +G  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYA-EENECFFELEVVIL--PNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPD-TGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP---ARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREV--PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG-VLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE-NKAVTLSI---LNDNDNFVLDPY-----SGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISP-PSNTSFKLVPLSAI--PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVN 775
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6KEQ9|PC11X_PIG (Protocadherin-11 X-linked OS=Sus scrofa OX=9823 GN=PCDH11X PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.439e-64
Identity = 229/777 (29.47%), Postives = 343/777 (44.14%), Query Frame = 1 
Query:  106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH-LHPSFNKASYFIKSPFLKLSDK-GDLML-------------SSRIDLETICAQ---HEMCCEEVE-CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRP 2328
            + L  + +Q   Q   + I EE P +++IG+++  L+ S             KL  K GD+ L              +RID E +CA       C  EVE  +L   I            + I   + D NDN P F      +++ EN  I     L   +D D T  N V  Y   +    F LD    P       LIV+K LD E K  Y   ++  D    ++ +T  L++ V D NDN P F + E ++ I EN PVG  +  + A D D     KI + F  L  N  +  F +   TG I +++ L  +    +K  V A+D        A A + + V D+NDN P I         N  + ++E  P   ++  + VTD D   N  VSC     +   FRL  V +  + L +    DYE+ RE   ++   D G P       L + VKD N+ AP F + F  L + EN   G  + ++SA D D    A + Y    +    F +D  TG I + +++LDRE  E+    ++  D    P     TV++ VLD+NDN P F      F + ENL  +  V G I  TD D  E N+ V+  +    D+ +    +P     ++G I      DRE   +YT  ++A D G    S+    TI V D NDN P +V P SS+     V  + N  PG ++  + A D D G N+ + YS++  N K LFI++Q +G + +        +G  +L ++A D G+P
Sbjct:   12 VLLACIVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDRSLTTPMQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVVDAHCFYEVEVAVLPDEIF---------RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPATIDPD-TGINGVQNYHLIKGQSIFGLDVIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGSSVTQLHATDADIGENAKIHFYFSNLISNMAKKLFHLNSTTGLITIKEPLDREESPNHKLLVLASDG---GLTPARAMVLVNVTDINDNIPSIDIRYIINPINGTVVLSENAPLNTKIALITVTDKDADHNGWVSC--FTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFLSLSVPENNSPGTQLTKISAMDADSGRNAEINYLLGFDAPSEFNLDHRTG-ILTAVKKLDREKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEYNFYVPENLPRHGTV-GLITVTDPDYGE-NSAVILSI---LDANDDFTIDP-----QTGVIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVTINVVDVNDNKPVFVVP-SSNYSFELVPPSTN--PGTVVFTVVAIDNDTGMNAELRYSMVGGNTKGLFIIDQTSGNITLKEKCVFADLGLHRLVVKAKDLGQP 759
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.735e-63
Identity = 226/782 (28.90%), Postives = 351/782 (44.88%), Query Frame = 1 
Query:  106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH-----LHP--SFNKASYFI------KSPFLKLS-DKGDLMLS-SRIDLETICA---QHEMCCEEVE-CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQL-----QHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRP 2328
            + L  + +    Q   + I EE P +++IG+++      L P  S   A  F         P +++  D G++  + +RID E +CA   + E C  EVE  IL   I            + I   + D NDN P F      +++ EN  I     L  A+D D    N V  Y   +    F LD    P       LIV+K LD E K  Y   ++  D    ++ +T  L++ V D NDN+P F + E ++ I EN PVG  +  + A D D     KI + F  L  N  R  F +   TG I +++ L  +    +K  V A+D   M    A A + + V D+NDN P I         N  + ++E  P   ++  + VTD D   N  V+C     +   FRL  V +  + L +    DYE+ +E   ++   D G P       L + VKD N+ AP F + F  + + EN   G  + +VSA+D D    A + Y    +    F++D  TG + + +++LDRE  ++    I+  D    P T   TV + ++D+NDN P F      F + ENL  +  V G I  TD D  + N+ V   +       T DSQ             +G I      DRE   +YT  ++A D G    S+    TI V D NDN P ++ P S++     V  + N  PG ++ ++ A D D G N+ V YS++  N + LF ++Q TG + +     +  +G  ++ ++A+D G+P
Sbjct:   12 VLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIF---------RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDV-GTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLM---PARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC--FTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGML-TVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTV-GLITVTDPDYGD-NSAVTLSILDENDDFTIDSQ-------------TGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNY-SYELVLPSTN--PGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759

HSP 2 Score: 122.094 bits (305), Expect = 1.586e-26
Identity = 129/455 (28.35%), Postives = 212/455 (46.59%), Query Frame = 1 
Query: 1069 VKDLNDNSPKITSLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAV----GNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPND----YFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-------ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEIL--TVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364
            ++D+NDN+P   +   N  I I E       +TL    D D+G N   + +L++   N F LD +    G+++  L   +  D E +     +++  D G P+  +   L V V D N+  P F++   ++ + EN   G ++ Q+ A+D D   +A + +SF+   ++     F ++  TG I      LDRE     ++ ++ +D    P   +  V++ V D NDN P+ IDI  + N       +SEN+   +K+   I  TDKD D  N +V     H    + R    P+F    S + L  T   LD E    Y +++ A D G P L+      I V+D+NDN P +           TV+I  N+ PG  + K+ ATD D G N+ + Y +  +    F L++ TG L V + L      ++   + A DNG PP  +  ++F+ I
Sbjct:  129 IEDINDNAPLFPATVIN--ISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQ-NIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIK-EPLDREETPNHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPS-IDIRYIVNPVNDTVVLSENIPLNTKI-ALITVTDKDADH-NGRVTCFTDHEIPFRLR----PVF----SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQ------SFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSI 560
[Close]
BLAST of Protocadherin vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 1.813e-63
Identity = 226/782 (28.90%), Postives = 351/782 (44.88%), Query Frame = 1 
Query:  106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH-----LHP--SFNKASYFI------KSPFLKLS-DKGDLMLS-SRIDLETICA---QHEMCCEEVE-CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL----SGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQL-----QHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVAR---LLPIGQFQLFLRASDNGRP 2328
            + L  + +    Q   + I EE P +++IG+++      L P  S   A  F         P +++  D G++  + +RID E +CA   + E C  EVE  IL   I            + I   + D NDN P F      +++ EN  I     L  A+D D    N V  Y   +    F LD    P       LIV+K LD E K  Y   ++  D    ++ +T  L++ V D NDN+P F + E ++ I EN PVG  +  + A D D     KI + F  L  N  R  F +   TG I +++ L  +    +K  V A+D   M    A A + + V D+NDN P I         N  + ++E  P   ++  + VTD D   N  V+C     +   FRL  V +  + L +    DYE+ +E   ++   D G P       L + VKD N+ AP F + F  + + EN   G  + +VSA+D D    A + Y    +    F++D  TG + + +++LDRE  ++    I+  D    P T   TV + ++D+NDN P F      F + ENL  +  V G I  TD D  + N+ V   +       T DSQ             +G I      DRE   +YT  ++A D G    S+    TI V D NDN P ++ P S++     V  + N  PG ++ ++ A D D G N+ V YS++  N + LF ++Q TG + +     +  +G  ++ ++A+D G+P
Sbjct:   12 VLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIF---------RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDV-GTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLM---PARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTC--FTDHEIPFRLRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGML-TVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTV-GLITVTDPDYGD-NSAVTLSILDENDDFTIDSQ-------------TGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNY-SYELVLPSTN--PGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQP 759

HSP 2 Score: 122.094 bits (305), Expect = 1.586e-26
Identity = 129/455 (28.35%), Postives = 212/455 (46.59%), Query Frame = 1 
Query: 1069 VKDLNDNSPKITSLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAV----GNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPND----YFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-------ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEIL--TVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364
            ++D+NDN+P   +   N  I I E       +TL    D D+G N   + +L++   N F LD +    G+++  L   +  D E +     +++  D G P+  +   L V V D N+  P F++   ++ + EN   G ++ Q+ A+D D   +A + +SF+   ++     F ++  TG I      LDRE     ++ ++ +D    P   +  V++ V D NDN P+ IDI  + N       +SEN+   +K+   I  TDKD D  N +V     H    + R    P+F    S + L  T   LD E    Y +++ A D G P L+      I V+D+NDN P +           TV+I  N+ PG  + K+ ATD D G N+ + Y +  +    F L++ TG L V + L      ++   + A DNG PP  +  ++F+ I
Sbjct:  129 IEDINDNAPLFPATVIN--ISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQ-NIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIK-EPLDREETPNHKLLVLASDGGLMP--ARAMVLVNVTDVNDNVPS-IDIRYIVNPVNDTVVLSENIPLNTKI-ALITVTDKDADH-NGRVTCFTDHEIPFRLR----PVF----SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQ------SFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSI 560
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: A0A4S2LI76 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_008677 PE=4 SV=1)

HSP 1 Score: 422.935 bits (1086), Expect = 5.442e-124
Identity = 316/952 (33.19%), Postives = 484/952 (50.84%), Query Frame = 1 
Query:   76 LLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHL---HPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCE-EVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKF---VKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK--EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAF--HKA-------------VANIFIKVKDLNDNSP--KITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-------INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI-----------KSGI--RRLDREMVERIEINIIVTDAIENPKTGQC------------------------------TVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG--LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVAR--------------------LLPIGQFQLFLRASDNGRPPRHNETSLFI-FINGDEV--ATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQ-----NSFEPPKTSNHHVTGT-------WGHHTDEGSY 2589
            LL + + F   F+ Y   + +   + F + EES +   IGNI      HP+         S F  ++  G + L+ R+DLE++C ++ +CC+ E  C L  +++ +  +S + + + I V + D NDN P F    +  Q + V+E   +G    L  A+D D +  N+V +Y     E    F LD S  P++ L + + LDYE  + Y  +LEACD  + C  Q L I V D NDN P F +  Y + + ENF VGQ ++ +EA D DS  + ++ + FH  +D ++ NTF +  NTG + L+ +L+A  R +YKF V   +  + A   H +             +A++ I V+DLND SP  K+ S S   ++ + E  PP  +  +QVTD D G N  V+C+L+Q         ++ F L   G ++Y+LS+ RSFD E E ++   I C D GSP+  + + L + ++DINEF P  +K      + EN E G  ++++SA D D SA L Y  + +   YF +DP TG I            +G+    LDRE  ER+   + V+D    P T  C                              TV + VLD+NDN P FI+  G F+++EN   +++V GR+ A D+D  E N +V + L+ ++ S N   +  +F+V   G I T++ LDRE  + YT+E+ A D+    P+ ++  N T+ V D+NDN P W  P   H     VNITA+ PPG++I ++ ATD D  EN  V YS+++ + + +F ++  TG++ VA+                    LLP G ++L LRASD G P    ET L +   + D V  A LN  II+V++G+TG ISI L+IAIICVRRR  ++   + GS      N F P + S     G        +G+  D   Y
Sbjct:    9 LLAVCLGFFCAFVSYSTTEQTTPVLRFVVNEESALRTTIGNISAYLLPHPTIT-----TDSKFFDVTTTGLVQLARRLDLESLCTENFLCCKLEQPCELSFSVVIESGTSREMQPLEIRVRILDINDNVPSFGPNSENGQVLEVSEMAKVGSLFSLTPAVDRDVSKENQVQRYTLHGVELLRMFELDDSEPPNVRLRLVRSLDYEKTTSYTGSLEACDP-RSCMRQNLTIRVTDANDNPPRFVKSTYSVSVPENFTVGQMVLQLEAEDIDSPPYAQMDFRFHGTADQDLYNTFRLERNTGRVVLRTRLAAHRRSEYKFDVSVVEGSSTAIMDHGSSTSVSNPILGSSNLAHVTITVEDLNDFSPNIKMFSPSEGQQLSVPENSPPTRVCVVQVTDSDSGDNGRVACRLVQSAASASETTLDSFVLSNAG-KLYTLSTTRSFDAEREPQVAVTIVCTDFGSPQRSSGRDLVIKIEDINEFPPELDKTTYHAAVYENAEAGVEVVRISARDPDHSAKLYYELSAQGKQYFHVDPLTGSILTIGETGTDFDSAGLLSSTLDREKTERVTFTVCVSDG---PPTSVCGGGDNNSKPSVRKMKQGSNTESTHAHTVSATVFVTVLDQNDNRPHFIE-KGPFSVAENQPRFTQVSGRLVAIDQDDGE-NGRVRYSLRQSWKSANGAPAPDLFQVDADGRIQTMEVLDRETTNAYTLELMACDSAPQTPLCTS-LNATVTVLDENDNKPIWRYP---HDQDKEVNITADLPPGHVIARVHATDQDAAENGRVVYSLIDPHRRTVFQVDNKTGDIAVAQSNPAAPSEANFQPSANKPSPLLP-GIYRLRLRASDQGHPQLVAETWLQVNVFSTDTVVSAGLNFMIIVVMVGVTGLISICLVIAIICVRRR-SFSLRASHGSHDRTRSNGFRPGRDSGDGAEGVHFPLKHDYGYPVDSTGY 942
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: A0A074ZL43 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_05267 PE=4 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 9.591e-124
Identity = 315/952 (33.09%), Postives = 486/952 (51.05%), Query Frame = 1 
Query:   76 LLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHL---HPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCE-EVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKF---VKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK--EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAF--HKA-------------VANIFIKVKDLNDNSP--KITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-------INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI-----------KSGI--RRLDREMVERIEINIIVTDAIENPKTGQC------------------------------TVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG--LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVAR--------------------LLPIGQFQLFLRASDNGRPPRHNETSLFI-FINGDEV--ATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQ-----NSFEPPKTSNHHVTGT-------WGHHTDEGSY 2589
            LL + + F   F+ Y   + +   + F + EES +   IGNI      HP+         S F  ++  G + L+ R+DLE++C ++ +CC+ E  C L  +++ +  +S + + + I V + D NDN P F    +  Q + V+E   +G    L  A+D D +  N+V +Y     E    F LD S  P++ L + + LDYE  + Y  +LEACD  + C  Q L I + D NDN P F +  Y + + ENF VGQ ++ +EA D DS  + ++ + FH  +D ++ NTF +  NTG + L+ +L+A  R +YKF V   +  + A   H +             +A++ I V+DLND SP  K+ S S   ++ + E  PP  +  +QVTD D G N  V+C+L++         ++ F L   G ++Y+LS+ RSFD E E ++   I C D GSP+  + + L + ++DINEF P  +K      + EN E G  ++++SA D D SA L Y  + +   YF +DP TG I            +G+    LDRE  ER+   + V+D    P T  C                              TV + VLD+NDN P FI+  G F+++EN   +++V GR+ A D+D  E N +V + L+H++ S N   +  +F+V   G I T++ LDRE  + YT+E+ A D+    P+ ++  N T+ V D+NDN P W  P   H     VNITA+ PPG++I ++ ATD D  EN  V YS+++ + + +F ++  TG++ VA+                    LLP G ++L LRASD G P +  ET L +   + D V  A LN  II+V++G+TG ISI L+IAIICVRRR  ++   + GS      N F P + S     G        +G+  D   Y
Sbjct:    9 LLAVYLGFFCAFVSYSNTEQATPVLRFVVNEESALRTTIGNISAYLLPHPTIT-----TDSKFFDVTTTGLVQLARRLDLESLCTENFLCCKLEQPCELSFSVVIESGTSREMQPLEIRVRILDINDNVPSFGPNSENGQVLEVSEMAKVGSLFSLTPAVDRDVSKENQVQRYTLHGVELLRMFELDDSEPPNVRLRLVRSLDYEKTTSYTGSLEACDP-RSCMRQNLTIRITDANDNPPRFVKNTYSVNVPENFTVGQVVLQLEAEDIDSPPYAQMDFRFHGTADQDLYNTFRLERNTGRVVLRTRLAAHRRSEYKFDVSVVEGSSTAIMDHGSSTSVSNPILGSSNLAHVTITVEDLNDFSPNIKMFSPSEGQQLSVPENSPPTRVCVVQVTDSDSGDNGRVACRLVRSAASASETTLDSFVLSNAG-KLYTLSTTRSFDAEREPQVAVTIVCTDFGSPQRSSGRDLVIKIEDINEFPPELDKTTYHAAVYENAEAGVEVVRISARDPDHSAKLHYELSAQGKQYFHVDPLTGSILTIGDTGTDFDSAGLLSSTLDREKTERVTFTVCVSDG---PPTSVCGGDDSNSKPSMRAMKQGSNTESARTHTVSATVFVTVLDQNDNRPHFIE-KGPFSVAENQPRFTQVSGRLVAIDQDDGE-NGRVRYSLRHSWKSANGVPAPDLFQVDADGRIQTMEVLDRETTNAYTLELMACDSAPQTPLCTS-LNATVTVLDENDNKPIWRYP---HDQDKEVNITADLPPGHVIARVHATDQDAAENGRVVYSLIDPHRRTVFQVDNKTGDIAVAQSNPAAPSETNFQSNANKPSPLLP-GIYRLRLRASDQGHPQQVAETWLQVNVFSTDTVVSAGLNFMIIVVMVGVTGLISICLVIAIICVRRR-SFSLRASHGSHDRTRPNGFRPGRDSGDGAEGVHFPLKHDYGYPVDSTGY 942
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: A0A4E0RRX5 (Protocadherin-1 OS=Fasciola hepatica OX=6192 GN=D915_000244 PE=4 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 2.459e-123
Identity = 300/876 (34.25%), Postives = 454/876 (51.83%), Query Frame = 1 
Query:  148 VTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCE-EVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPK----QTVNVAENEPIGFYLYLDRALDADATSANRVHQYIF--KEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKA------------------VANIFIKVKDLNDNSPKITSLS---GNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLL--QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI----KSGIRR---LDREMVERIEINIIVTD--------AIENPK--------------------------TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPM-LSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVAR------------------------LLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEV---ATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRR 2475
            V FK+ EE+ +   IGN+        +      SPF K++  G + L+ R+DLET+C +  +CC+ E  C L  T+  + +S+     + + V + D NDN P+F   +    Q V ++E    G  + L  A D D    +++ +Y+    +   TF LD + LPS+ L +  PLDYE  +QY  TLEACD+ + C +Q L + V+D+NDN P F +  Y++ +LEN  VGQ ++ +EAIDKDS +  ++ + FH   D  +R TF + ++TG I LQ +L+A+ R +Y+F V       +A                      VA +FIKV+DLND SP+I   S   G + I + E   P+ +  +QVTDDD+G N+ V+C ++        F L   G + Y+LS+ R  D E E      I C D G+P   + + L V V+D+NEF P   +   +  + EN + G  ++++ A DRD SA L Y    E   YF IDP +G I     +G +    LDRE  E+I +++ VTD         I  P                           T   TV + VLDENDN P F    G F ++EN   +++VRG++AA D D+ + N  V + L+H + S +   +  +F+V   G I T+  LDRE  + YT+E+ A D+     L    N T+ V+D+NDN P W  P   H     VNIT++ PPG+LI++++A+D D G+N  V Y +++ +K  +F ++  TG++ +A                         LLP G ++L LRASD G P    ET L + + G ++   A LN  II+V++ +TG ISI L+IAIICVRRR
Sbjct:   32 VQFKVEEEAHLHTTIGNVSRY--LLAQPRITSDSPFFKITTNGMVQLTHRVDLETLCLERSLCCDLEKPCELICTVAVESESTRAIRLLELRVHILDINDNAPQFATGQTDGQQVVQISELAEPGHMISLMPATDRDLAKEHQIQRYLIHGTQLQRTFELDYTDLPSVRLRLLTPLDYESVTQYSGTLEACDS-RSCTSQNLTVKVIDENDNRPVFLKHSYEVVVLENATVGQTVLQLEAIDKDSSVNAQMNFHFHGPIDPGLRETFRVEQDTGRIVLQSRLAAQRRIEYRFAVAVDGAKPVAIGPGPSDPSTSRAVTLNAGTPDVAKVFIKVQDLNDFSPQIRMFSPAEGQALI-VPENAQPQRVCVVQVTDDDVGENSQVTCDIVGPSGISGTFALTGSG-KYYTLSTTRILDAEVESRFTVTIACSDAGTPPRSSSRDLLVRVEDLNEFPPHLAQSTYQASVYENAKSGTEVVRIQAEDRDQSAKLYYDLKAESKQYFGIDPSSGVIFTLGDTGTQTSTVLDREKTEQITLHVCVTDGPSTSGGCGILEPDRQSLSSSSDRKDSTSGTSTSTSRLVYTASATVFVTVLDENDNRPVFTQ-KGPFFVTENQPRFTQVRGQLAAMDPDEGQ-NGLVRYSLRHIWVSADGTSASDLFQVDAQGVIRTMDVLDREKTNAYTLELVACDSAPKSPLCTTLNVTVTVDDENDNKPIWHYP---HDQDKEVNITSDLPPGHLIVRIRASDRDAGDNGRVVYHLIDPHKRTVFEVDNYTGDVAIAGAQHKRDMDDEVIPSGTGDPEPPSPLLP-GIYRLRLRASDLGHPQHSTETWLQVNVFGPQIMANAGLNFMIIVVMVAVTGLISICLVIAIICVRRR 896
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: H2KQG9 (Protocadherin-1 OS=Clonorchis sinensis OX=79923 GN=PCDH1 PE=4 SV=1)

HSP 1 Score: 420.239 bits (1079), Expect = 5.246e-123
Identity = 312/931 (33.51%), Postives = 479/931 (51.45%), Query Frame = 1 
Query:   76 LLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHL---HPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCE-EVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKF---VKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK--EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAF--HKA-------------VANIFIKVKDLNDNSP--KITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-------INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQI-----------KSGI--RRLDREMVERIEINIIVTDAIENPKTG---------------------------QCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG--LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVAR--------------------LLPIGQFQLFLRASDNGRPPRHNETSLFIFI-NGDEV--ATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQ-----NSFEPPKTSNHHVTG 2556
            L  + + F   F+ Y   + +   + F + EES +   IGNI      HP+         S F  ++  G + L+ R+DLE++C ++ +CC+ E  C L  +++ +  +S + + + I V + D NDN P F    +  Q + V+E   +G    L  A+D D +  N+V +Y     E    F LD S  P++ L + + LDYE  + Y  +LEACD  + C  Q L I V D NDN P F +  Y + + ENF VGQ ++ +EA D DS  + ++ + FH  +D ++ NTF +  NTG + L+ +L+A  R +YKF V   +  + A   H +             VA++ I V+DLND SP  K+ S S   ++ + E  PP  +  +QVTD D G N  V+C+L+Q         ++ F L   G ++Y+LS+ RSFD E E ++   I C D GSP+  + + L + ++DINEF P  +K      + EN E G  ++++SA D D SA L Y  + +   YF +DP TG I            +G+    LDRE  ER+   + V+D   N   G                             TV + VLD+NDN P FI+  G F+++EN   +++V GR+ A D+D  E N +V + L+ ++ S N   +  +F+V   G I T++ LDRE  + YT+E+ A D+    P+ ++  N T+ V D+NDN P W  P   H     VNITA+ PPG++I ++ ATD D  EN  V YS+++ + + +F ++  TG++ VA+                    LLP G ++L LRASD G P +  ET L + + + D V  A LN  II+V++G+TG ISI L+IAIICVRRR  ++   + GS      N F P + S     G
Sbjct:    9 LFAVCLGFFCAFVSYSNTEQTTPVLRFVVNEESALRTTIGNISAYLLPHPTIT-----TDSKFFDVTTLGLVQLARRLDLESLCTENFLCCKLEQPCELSFSVVIESGTSREMQPLEIRVKILDINDNVPSFGPNSENGQVLEVSEMAKVGSLFSLTPAVDRDVSKENQVQRYTLHGVELLRMFELDDSEPPNVRLRLVRSLDYEKTTSYTGSLEACDP-RSCMRQNLTIRVTDANDNPPRFVKNTYSVNVPENFTVGQTVLQLEAEDIDSPPYAQMDFRFHGTADQDLYNTFRLERNTGRVVLRTRLAAHRRSEYKFDVSVVEGSSTATMDHGSSTSVSNPILGSSNVAHVTITVEDLNDFSPNIKMFSPSEGQQLSVPENSPPTRVCVVQVTDSDSGDNGRVACRLVQSAASASETTLDSFVLSNAG-KLYTLSTTRSFDAEREPQVAVTIVCTDFGSPQRSSGRDLVIKIEDINEFPPELDKTTYHAAVYENAEAGVEVVRISARDPDHSAKLYYELSAQGKQYFHVDPLTGSILTIGDTGTDFDSAGLLSSTLDREKTERVTFTVCVSDGPPNSVCGGGESNSKPSMRTMKQGSNTESTHTHTVSATVFVTVLDQNDNRPHFIE-KGPFSVTENQPRFTQVSGRLVAIDQDDGE-NGRVRYSLRQSWKSANGAPAPDLFQVDADGRIQTLEVLDRETTNAYTLELMACDSAPQTPLCTS-LNATVTVLDENDNKPIWRYP---HDQDKEVNITADLPPGHVIARVHATDQDAAENGRVVYSLIDPHRRTVFQVDNKTGDIAVAQSNPAAPSETNFQPNANKPSPLLP-GIYRLRLRASDQGHPQQVAETWLQVNVFSTDNVVSAGLNFMIIVVMVGVTGLISICLVIAIICVRRR-SFSLRASHGSHDRTRPNGFRPGRDSGDGAEG 924
[Close]
BLAST of Protocadherin vs. TrEMBL
Match: A0A4Z2DTZ9 (Protocadherin-1 isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_005628 PE=4 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 1.179e-122
Identity = 287/878 (32.69%), Postives = 434/878 (49.43%), Query Frame = 1 
Query:   85 MKI-DFCIIFLFYL-----CYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVE-CILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPK-QTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK--EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKA-------------VANIFIKVKDLNDNSPKITSLS--GNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYI---------------NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKS-------------GIRRLDREMVERIEINIIVTDAI----------------------------ENPK--------TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG-LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVAR------------------------LLPIGQFQLFLRASDNGRPPRHNETSLFI--FIN 2367
            MK+ D+ +IF+  L      +      V  KI EESP+   +GNI      F+++     S F  ++  G + L  R+DLET+C +  +CCE  + C L + ++ +  +S++ E + +++ + D ND+ P+F+    Q V ++E   IG  L L  A DAD    N++ +Y     E   TF LD S LP++ L + +PLDYE+ + Y   +EACD  +QC  Q L I V+D NDN P F Q  Y++ I ENF VGQ ++ + AIDKDS+L  ++ +      D N++ TF +  ++G + LQ +L+A  R +Y+F V  ++ ++                    AN+ I V+DLND SP I  +S      + I E      +  LQVTD+D+  N  V C+L+                   + F L   GN  Y+L + RSFD E E ++   I C D+G P   + + L + V+D+NE+ P  E+      ++EN + G  ++QV A DRD +A L Y  + E   YFTIDP TG I +                 LDRE  E+I  ++ VTD                               NP         T   T+ + VLD NDN P FI   G F+I EN   ++++ GR+ A D D  E N  V + ++H + S     S  +F+V   G+I T++ +DRE  + YT+EI A D+  L  L    N TI V D+NDN P+W  P   H     VNIT++ PPG ++ ++ A D D GEN  V YS+++ +K  +F ++ +TGE+ V +                        LLP G ++L LRASD G P +  ET L +  F+N
Sbjct:    1 MKLNDYFLIFILQLIVSVNAFTSKPPIVKLKIDEESPLHTTLGNISSY--LFSQSKITSDSIFFTVTQNGLIQLIRRLDLETLCLEQALCCEHNKPCELTSNVVIEGVNSEELELVELNILIQDINDHVPQFISGNNQIVKISELAEIGSTLNLMPASDADLAPDNQIQRYAIHGVELQQTFELDTSDLPNVRLRLTQPLDYELTTNYSGIIEACD-RRQCAQQNLTILVIDANDNKPMFVQHSYELTIPENFSVGQTVLVLNAIDKDSELNARMDFRLQGDVDMNLKKTFRLDSHSGHLILQSRLAAHQRSEYRFSVTVSEVLSSQVQSIDALSSRIPVTSTDTANVIITVQDLNDFSPSIRMISPMEGKHLSIQENSAHVRVCVLQVTDNDLHDNGRVQCRLVANSFEPSSSTSDSHNSTSTDSFELTQTGNH-YTLLTTRSFDAELEPQLTVTIACTDYGVPPRSSSRELMIQVEDVNEYPPELERINYHASIMENVKSGIEVMQVVAHDRDQAAKLTYELSNEGKQYFTIDPITGVITTLGGDEKDENGNLLSFSLLDREKTEKITFSVCVTDGTPTNGCGLIALDHHSTMNNKEREKHSQQPANPLGDISRPVFTASATIFVTVLDVNDNQPQFI-TKGPFSILENQPRFTQINGRLTALDADAGE-NGHVRYSIRHIWISATGIPSPDVFEVDSEGQIRTMEVMDREQINAYTLEIVACDSAPLNPLCTELNITITVLDENDNKPEWHYP---HARDKEVNITSDLPPGRVVARILAMDLDTGENGRVIYSLIDPHKRTVFQIDNITGEISVVKNNLNELGQNGDGTYILDDSIHSTPLLP-GVYRLRLRASDMGHPEQATETWLQVSYFLN 868
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 262.692 bits (670), Expect = 1.864e-72
Identity = 236/794 (29.72%), Postives = 368/794 (46.35%), Query Frame = 1 
Query:   97 FCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH---LHPSFNKASYFIKSPFLKLSDKGDLMLSSRI--DLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKIT------SLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGN------EIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            F +  L       +   + + + EE P + +IG++     L  S +     + +P+L++  K   + ++ I  D ET+    +   +   C L+  +   D   +QS   I   + V D NDN P+F  P  T++V EN  +G    + +A D D T  N V +Y      E +  F+L  +     +LP   LIV   LD E+K  Y  T+ A D  T  + ++  L + + D NDN P F +  Y+ E+ EN PVG  ++ V+A D D     +I Y  H+ SD  +     I  +TG I ++  L  +    +KF V A DK   +   +   + I+V D NDN+P +           +    I+E  P      L QV+D D G NA V+C +       F+L   G+      + Y L +    DYE  R+ + EI   D G+P   +  SL V V D N+ +P F     +++  E  + G  +L V A D D    A L YS   + +    F IDP +G++++    LDRE  ER E  +   D       G  TV+I+VLD NDN P F+  S  F++ EN+   S V G +   D DK E N +V  QL    D  N  +         +G IL+    DRE   +YT  ++A D G P  S++   TI V D+NDN P    P +S        ++  + P  ++  ++A D DYG N+ + YS+   N   LF ++   GE+++ + L     G  +L ++ SD G+P RH    + I++N
Sbjct:    8 FLLFALLVDSINSALGGILYHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLRVDGKTGEIFTTEIPIDRETL---KDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRD-TERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQ--LIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASD-PVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDK-GPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDV--PFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRAR-SPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPV-GMVTVLDMDKGE-NAQV--QLSVEPDVGNFVVQ------NGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNS----SFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVN 776

HSP 2 Score: 110.923 bits (276), Expect = 4.163e-24
Identity = 154/631 (24.41%), Postives = 255/631 (40.41%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDT--NKQCNTQALEIHVLDQNDNYPSF--------SQQEYQIEILENFPVGQQIIAVEAIDKDSD--------LFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE-LFTLQVTDDDIGVNANVSCQLLQQYIND------FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDIS-GVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYG---ENSNVTYSVM 2211
            + V ++D NDN P+F K      V+EN P+G+ +   +A D+D      +   I +       + Q    S G+I VK PLD E  S +   + A D   + + +T  + I V DQNDN P+         +  +    I E+ PVG  +  V+  DKD          +   + +      D+++ N     +    ++    L  +  + Y+ ++ A D    A   +  ++ ++V D NDNSP  +      ++E  E + P E +  +   D D G NA    +L+   I D      F +D    E+ + S +   D E++   +  +   D G P +    ++ + V D N+  P+F        +LEN      +  V+  D D     +   + EP+   F +   TG I S I   DRE        +   D  E P++    V I VLDENDN P     S   F     L++   V   + A D D    N ++++ +      +       +F ++ S GEI   K+L R+    + + ++  D G P   A     IYV +   N    V  L  H     ++               A DPDYG   + SN+ Y  +
Sbjct:  229 LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIER-STGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDN-----KKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPAL-SSTNSLRVQVTDTNDNSPIFSPPL--FEVEFAEENQPGEKVLDVIALDADSGTNA----ELVYSIIADSSTRGLFEIDPSSGEVRARSPL---DREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSIS-FDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGS-NAELVYSIAGGNPHE-------LFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISN-VSLVEGLVGHSLYTPLDTDI------------AGDPDYGLAAQRSNIVYGSL 821
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32])

HSP 1 Score: 263.848 bits (673), Expect = 4.909e-72
Identity = 235/797 (29.49%), Postives = 368/797 (46.17%), Query Frame = 1 
Query:   97 FCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVH---LHPSFNKASYFIKSPFLKLSDKGDLMLSSRI--DLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKIT------SLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGN------EIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPN--DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            F +  L       +   + + + EE P + +IG++     L  S +     + +P+L++  K   + ++ I  D ET+    +   +   C L+  +   D   +QS   I   + V D NDN P+F  P  T++V EN  +G    + +A D D T  N V +Y      E +  F+L  +     +LP   LIV   LD E+K  Y  T+ A D  T  + ++  L + + D NDN P F +  Y+ E+ EN PVG  ++ V+A D D     +I Y  H+ SD  +     I  +TG I ++  L  +    +KF V A DK   +   +   + I+V D NDN+P +           +    I+E  P      L QV+D D G NA V+C +       F+L   G+      + Y L +    DYE  R+ + EI   D G+P   +  SL V V D N+ +P F     +++  E  + G  +L V A D D    A L YS   + +    F IDP +G++++    LDRE  ER E  +   D       G  TV+I+VLD NDN P F+  S  F++ EN+   S V G +   D DK E N +V   ++     F  QN            +G IL+    DRE   +YT  ++A D G P  S++   TI V D+NDN P    P +S        ++  + P  ++  ++A D DYG N+ + YS+   N   LF ++   GE+++ + L     G  +L ++ SD G+P RH    + I++N
Sbjct:   44 FLLFALLVDSINSALGGILYHVREEQPPNTLIGSLAADQGLPDSGHLYKLEVGAPYLRVDGKTGEIFTTEIPIDRETL---KDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRD-TERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQ--LIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASD-PVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDK-GPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDV--PFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRA-RSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPV-GMVTVLDMDKGE-NAQVQLSVEPDVGNFVVQN-----------GTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNS----SFRRLSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVN 812

HSP 2 Score: 112.464 bits (280), Expect = 1.388e-24
Identity = 154/631 (24.41%), Postives = 255/631 (40.41%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDT--NKQCNTQALEIHVLDQNDNYPSF--------SQQEYQIEILENFPVGQQIIAVEAIDKDSD--------LFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRE-LFTLQVTDDDIGVNANVSCQLLQQYIND------FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDIS-GVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYG---ENSNVTYSVM 2211
            + V ++D NDN P+F K      V+EN P+G+ +   +A D+D      +   I +       + Q    S G+I VK PLD E  S +   + A D   + + +T  + I V DQNDN P+         +  +    I E+ PVG  +  V+  DKD          +   + +      D+++ N     +    ++    L  +  + Y+ ++ A D    A   +  ++ ++V D NDNSP  +      ++E  E + P E +  +   D D G NA    +L+   I D      F +D    E+ + S +   D E++   +  +   D G P +    ++ + V D N+  P+F        +LEN      +  V+  D D     +   + EP+   F +   TG I S I   DRE        +   D  E P++    V I VLDENDN P     S   F     L++   V   + A D D    N ++++ +      +       +F ++ S GEI   K+L R+    + + ++  D G P   A     IYV +   N    V  L  H     ++               A DPDYG   + SN+ Y  +
Sbjct:  265 LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIER-STGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDN-----KKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPAL-SSTNSLRVQVTDTNDNSPIFSPPL--FEVEFAEENQPGEKVLDVIALDADSGTNA----ELVYSIIADSSTRGLFEIDPSSGEVRARSPL---DREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSIS-FDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLSPLAAPDSVVEVVEAEDIDYGS-NAELVYSIAGGNPHE-------LFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSRHAIALVHIYVNETISNV-SLVEGLVGHSLYTPLDTDI------------AGDPDYGLAAQRSNIVYGSL 857
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh1b (protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2])

HSP 1 Score: 259.225 bits (661), Expect = 3.955e-71
Identity = 231/791 (29.20%), Postives = 366/791 (46.27%), Query Frame = 1 
Query:  106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKD-KSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNL--------DQSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIE-------INETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFR----LDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            + L Y C   S  ++T+++ EE P + ++G++       +    +   +  P+L++  K GD+  +   ID ET+     +  E   C L+  +   D         I   + + D+NDN P+F  P   + + EN  +G +  +  A+D DA S N +  Y     +   NL           ++P   LIV   LD E +  Y  +++  D  T  + ++  L I + D NDN P F +  Y+ E+ EN PVGQ ++ V+A D D     ++ Y FH+ S  N++    I  NTG I+++  +  +     KF V A D    A   + A + I VKD NDN+P I  + G   +        ++E  P      L +V+D D G NA V+C +        R     D+     Y L +    DYE  +E + EI   D G+P   +  SL V V D+N+ AP F     ++   E  + G  +L V A+D D    A L YS   +      F I+P+TG+++  + +LDRE  ER E ++   D       G  TV++ VLD NDN P F+     F++ EN+   S V G +   D DK E        +Q + + +N +     F +   +G IL+    DRE    YT  ++A D G P  S++   TI V D+NDN P +VT  S+        +T+   P   + K+ A D D G N+ + YS+   N   LF ++   GE+ +A+       G  +L ++ SD G+P RH    + IF+N
Sbjct:   22 VLLLYSC-GSSLASITYQLREEQPPNTLVGSLAADQGLPDTGHLYKLEVGGPYLRVDGKTGDIYTTDVPIDRETLKDCRNLF-EGDPCFLEFEVSITDLMKGSGPRLIEGRIEIQDENDNTPQFPSPILELAIPENTYVGAHYSIPVAMDKDAGS-NGIADYKLNSGSDAMNLFSLQVADNTDEKVPQ--LIVLGNLDREQRDTYDLSIKVIDGGTPPRYSSALLRITITDTNDNVPKFERSHYEGEMAENTPVGQSVLQVKANDDDLGANGQVTYSFHQPSP-NVQRLLHIDHNTGIIQVKGSVDREEVPLLKFSVQARDNGPQA-KSSKAMVTITVKDRNDNAPSI-RIRGFGLVAHEDGIANVSEDMPVGTPVALVEVSDKDEGENAVVTCVVAGDVPFQLRSASASDSTSKRKYFLQTTTPLDYERIKEYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPSLYEVDFAEENQPGDKVLDVVATDADSGTNAELLYSIITDSATKGLFDINPNTGEVRV-MNQLDREYKERYEFHVEAADKGVPSLKGTATVVVRVLDRNDNDPKFMLNGYSFSVLENMPPLSPV-GMVTVIDADKGEN-----AHVQLSVEPENGK-----FVIQNGTGTILSSISFDREKESTYTFRLKAVDGGDPPRSSYVGITINVLDENDNAP-YVTKPSNSSYKFLQPLTS---PDTRVEKVDAEDIDTGLNAELVYSITGGNPHGLFRISSTDGEITLAKEFTRKHNGLHRLVVKVSDKGKPSRHTTALVHIFVN 788
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 243.817 bits (621), Expect = 5.034e-66
Identity = 228/798 (28.57%), Postives = 363/798 (45.49%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVARL---LPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C        Q + + I EE   +++IGNI       H++ +   ++  +         +P L+ +S+ G++  +S RID E +C     +   C  E+E ++          +D    I I + V D NDN P F  P   +++ EN  I     +  A D D    N V++Y        F LD    P       LIV++ LD E K  Y   ++  D  + ++ +T  L++ V D NDN P F + + ++ I E+ PVG  ++ ++A D D     +I Y F        R  F +   TG I +Q+ L  +    +K  V A+D  + +   A A + I V D+NDN+P I         N  + ++E DP   ++  + V+D D  VN  V C + +     F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L + EN ++   +  ++A+D D     +  +   PN  +F +D  TG + +  R  DRE  ER    +   D        Q  VI+ +LD+NDN P F      F +SENL  YS V G I  TD D  E     +  L    D++N  I +P      +G I +    DRE   +YT ++RA D+G P  S+    TI V D NDN P  + P  S+     V ++A   PG ++ ++ A D D G N+ + Y+++N NNK LF ++ VTG + +         G  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLATLVACLWLDPAIAQELIYPIREELQENVLIGNIPKDLNISHMNTATGASNNLVYRLVSKAGDNPLLRVMSNTGEIFTTSNRIDREKLCPGPSYEDSECSFEIEVVIL--------PNDYFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDM-GPNSVYKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREETANHKLSVLASDGSSSS---ARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVSLSILNDNEN-FILDPY-----TGVIKSNVSFDREQQSSYTFDVRAVDSGHPPCSSAAKVTINVIDVNDNPPIVIYP-PSNTSFKLVPLSA--IPGSVVAEVFAVDGDTGMNAELKYTIVNGNNKGLFRIDPVTGNITLEEKPTEADSGLHRLVVNISDLGYPKSLHTLVLVFLYVN 774
[Close]
BLAST of Protocadherin vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1])

HSP 1 Score: 243.817 bits (621), Expect = 6.692e-66
Identity = 228/798 (28.57%), Postives = 363/798 (45.49%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICA----QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVARL---LPIGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C        Q + + I EE   +++IGNI       H++ +   ++  +         +P L+ +S+ G++  +S RID E +C     +   C  E+E ++          +D    I I + V D NDN P F  P   +++ EN  I     +  A D D    N V++Y        F LD    P       LIV++ LD E K  Y   ++  D  + ++ +T  L++ V D NDN P F + + ++ I E+ PVG  ++ ++A D D     +I Y F        R  F +   TG I +Q+ L  +    +K  V A+D  + +   A A + I V D+NDN+P I         N  + ++E DP   ++  + V+D D  VN  V C + +     F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L + EN ++   +  ++A+D D     +  +   PN  +F +D  TG + +  R  DRE  ER    +   D        Q  VI+ +LD+NDN P F      F +SENL  YS V G I  TD D  E     +  L    D++N  I +P      +G I +    DRE   +YT ++RA D+G P  S+    TI V D NDN P  + P  S+     V ++A   PG ++ ++ A D D G N+ + Y+++N NNK LF ++ VTG + +         G  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLATLVACLWLDPAIAQELIYPIREELQENVLIGNIPKDLNISHMNTATGASNNLVYRLVSKAGDNPLLRVMSNTGEIFTTSNRIDREKLCPGPSYEDSECSFEIEVVIL--------PNDYFRLIKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDM-GPNSVYKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREETANHKLSVLASDGSSSS---ARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTV-GVITVTDADAGE---NAVVSLSILNDNEN-FILDPY-----TGVIKSNVSFDREQQSSYTFDVRAVDSGHPPCSSAAKVTINVIDVNDNPPIVIYP-PSNTSFKLVPLSA--IPGSVVAEVFAVDGDTGMNAELKYTIVNGNNKGLFRIDPVTGNITLEEKPTEADSGLHRLVVNISDLGYPKSLHTLVLVFLYVN 774
[Close]
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21])

HSP 1 Score: 210.69 bits (535), Expect = 4.191e-56
Identity = 209/746 (28.02%), Postives = 341/746 (45.71%), Query Frame = 1 
Query:  250 PFLKLSDK-GDLMLSSR-IDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQY--IFKEPT--GTFNL------DQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGF-----HELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADK-----------MAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVG--NEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDR--DGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLF-IFIN 2367
            P ++++ + G+L  + R +D E +C   +   +E    ++  ++   +     + I + ++V D NDN P F  P  TV+V EN P G    +  A D D + AN V +Y  +  +P     F L      +  ++P   L+V+K LD E +  Y   L A D        +  L I+V D NDN P F Q E  +EI EN PVG  ++ + A D+D+    +++Y          S    +  F + +N+G + +   L+ +    Y+  + A DK                     +  I+++D+      +  +S  S + +     P  L T  V+D DIG N  V+C +    +  F+L  +   N+ Y L +  + DYE + E   +I+  D G+       S+ + + D N+ AP F +   K+ + EN   G +++ VSA+DR  D +A + Y    +    F +DP TG I S   +LDRE        I+  D       G  TVI+ VLD NDN P F      F ++EN+  +S V G +   D D+ E N +V   +  T + Q       +F +  ESG I +    DRE  H Y +E++A D G P+ S+     I+V D NDN P  + P S+      V  T    PG ++ ++ A D D   N+ + Y ++  N   LF ++ V G + +   L     G  +L +R SD G   +H+  +L  +F+N
Sbjct:   84 PLVRVNPRTGELFAAGRKMDREALCGGQD-PGDECHVDVQVGVLPV-QPGPFFKLIEVRINVEDINDNAPAFAAPVLTVSVPENAPAGKRFPIQPANDPD-SEANGVRRYELLPSDPATVSAFELSVTETANGEKVPY--LVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVNGVIYISEASHVNL-----PVALIT--VSDPDIGANGAVTCYIYNPEV-PFQLKKLTYPNQ-YLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETG-IISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTV-GMVTVADSDEGE-NGRVRLSILGTDNRQ-------LFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTL---PGTIVTEVSAVDNDAEINAELRYHIVGGNPHNLFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIGIAVQHHAVALVHVFVN 802

HSP 2 Score: 60.8474 bits (146), Expect = 1.711e-9
Identity = 78/289 (26.99%), Postives = 122/289 (42.21%), Query Frame = 1 
Query:  298 IDLET-ICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGT-----FNLDQSRLPSIGLIVKK-PLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSF----SQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNS 1122
            +D ET I +  E    E +     TI+AKD+     E    + V+V D NDN P+F   +    V EN P    + +    D+D     RV   I     GT     F++D    P  G+I      D E +  Y   ++A D  +  + +T  + IHV+D NDN P      S   Y+  +    P G  +  V A+D D+++  ++ Y    +   N  N F I    G+I L + L+      ++  V  +D      H AVA + + V +  +N+  I  L   S
Sbjct:  542 MDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLSIL----GTDNRQLFSID----PESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTLP-GTIVTEVSAVDNDAEINAELRY---HIVGGNPHNLFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIGIAVQHHAVALVHVFVNETLENATYIEWLIAGS 818
[Close]
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 205.682 bits (522), Expect = 9.221e-55
Identity = 210/799 (26.28%), Postives = 357/799 (44.68%), Query Frame = 1 
Query:  154 FKIMEESPIDMVIGN--------IVHLHPSFNKASYFIKSPFLKLSDK--GDLMLSSRIDLETICAQHEMCCEEVECI--LKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG------TFNLDQSRLPS------------IG----LIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQ-IEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFH-ELSDNNIRNTFIITENTGSIKLQ--KKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSP--KITSLSG----NSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRF------EKDFQ--KLKLLENREQGHNILQVSASDRDGSAVLKYSFT------GEP-NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-----ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIF----KVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLI-IKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARL---LPIGQFQLFLRASDNG 2322
            +++ EE  +  VIG+        +    P+ + +   + +P L + ++  G+L ++ R+D E +C +    C     +  ++   MAK + S     +++ + V D ND+ P F  P   V+++E+E +G  + L RA+D DA + N +  Y     +G       F+L +S                +G    L +++ LD E    Y   L   D    K   +  L I V+D NDN P F     + + I E+  VG  ++ + A D D+     I Y FH +L+    +    +   TG + ++  +KL  +    ++  V A D   ++   A   + +++ D NDN+P  ++ +L G    +  ++I E  P    +  + V+D D+G +  V  +L  ++     L +     + L + R  DYE  ++    +   D G+P+     +L + V DIN+  P F      E D    ++ L EN   G  +L + A+D D       +FT      GE   + F+++  TGQ+      LDRE   R E+++   D     +  +  V + VLDENDN PTF+ +S   N       E  +S     G ++ +D D+ + N +V   L         R + P +      T  G + T+  LDRE    Y + +RA D+G P LSA    +I V D NDN P   +P ++    H   +   SP G L+ + + A D D G+N    Y ++  N K +F+LN  +G L +AR    L  G  +L +R  D G
Sbjct:   31 YEVDEEVLVGYVIGDLRQSNLLCVCFFPPAPHVSPLPLHTPSLCIVNELSGELSVALRLDREALCMEEPDACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGT-NSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLS-RSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRL--EFPTGAELASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATP-LDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGD-NARVALNLV--------REAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSPNTNDTWKH---VRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRG 812

HSP 2 Score: 91.2781 bits (225), Expect = 7.422e-19
Identity = 138/603 (22.89%), Postives = 244/603 (40.46%), Query Frame = 1 
Query:  718 NTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR-NTFIITENT-------------------GSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSP----------KITSLS--GNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQL---LQQYINDFRLDAVGNE-IYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQK--------LKLLENREQGHNILQVSASDRD----GSAVLKYSFTGEPNDYFTIDPHTGQ-IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT-VIIEVLDENDNPPTFID---ISG---VFNIS--ENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPI------GQFQLFLRASDNGRP 2328
            N + L++ +L  D ND+ P+F      + I E+  VG+++    AID D+   +   Y     S + ++   F + E+                      ++L+++L  +    Y+  ++  D        +V  + I V D NDN+P          +IT  S  G S +++   DP            D G N  ++      L        L   G   + ++ +    D E     +  +   D G     A  ++ V + D N+ AP FE    +        +K++EN   G  ++ +S SD D    G+  ++  F   P       P+  Q +    R LD E  ++  ++++  D    PK  +   +II V+D NDN P F++   I G   V+ +S  EN  + + V   + ATD D    N  + F L      ++  ++E       +G++     LDRE    Y + + A D G P   A     + V D+NDN P +V   +S   ++   +   +  G  +  +  +D D G+N+ V  +++      +I         V R L +       Q++L +RA D+GRP
Sbjct:  124 NLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNPKLSGSVL-LTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADP------------DAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEF---PTGAELASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADR-GTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVL-NLLATDADSGP-NGAITFTLSELAGGES--VAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRP 705
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BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 202.601 bits (514), Expect = 6.737e-53
Identity = 185/639 (28.95%), Postives = 295/639 (46.17%), Query Frame = 1 
Query:  412 NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG--TFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQ--CNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKL--SAKVRQ----KYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND------FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG--SAVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKD-EINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHN-YTVEIRAFDTGLPM---LSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTG 2253
            ++ V V D N++ P F +    V++AE+EP+    +  RA D D+     V +Y   E  G   F +     P   L V+  LD E + +Y  T+ A DT  +   ++  + + VLD NDN P F+   Y     E   VG  + AV+A D D+     + Y F +   N     F +   TG I   +     A +RQ     + F V A D       +  A + + V+D+NDN P+       + +  + ++   +L  +  +D D GVN       L+  IN+      F +DA   +I  L S+   D E        +   D G+    A  ++ V V D N+  PRF +    +  LE+   G  ++ ++ASD D   S  ++Y+   G  +  F ID  TG +    RRLD E      +N+   D    P++    +++ V D NDNPP F+      +I EN+   ++V   I  T +D D ++N ++ + +   F        +P     ESGEI T  ++DRE+    + V +RA D  +P+    SA KN T+ V D+NDN P +VTP +    I    + A +  G ++  LQA+DPD  EN+ V Y+V   +  +LF L++ TG
Sbjct:  743 SVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEV-KYEIGEGNGGEKFGI----FPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVN-----FELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNL-TQLLRVTASDVDEGVNG-----ALRYAINEGNEGGKFTVDASTGQITLLGSL---DREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLA-RRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRV---ITVTARDPDADVNGELHYSIARQFPPGAHFTIDP-----ESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTA----ILVDGLRAAA--GSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTG 1347

HSP 2 Score: 172.17 bits (435), Expect = 2.022e-43
Identity = 168/619 (27.14%), Postives = 276/619 (44.59%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILEN-FPVGQQ----IIAVEAIDKDSDLFNKIIYGFHELSDNNIRN-TFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYD---HGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGE----------PNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDW-VTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTY 2202
            + +SV D NDN P F  P+  + V EN   G  ++   A DAD      V   +     G F +D +   S  L   + LD E ++ Y  T+ A D     + + L + V D NDN P FS+  Y  ++ E+  P G+     I  V A D DS  F ++ Y      D++  +  F +   TG++ + + L  + R  Y  +  A D   +A   A A +++ V D NDN+P + + S     E+ E  PP   L  +  TDDD GVNA +    +     + R  AVGN+   LS  R+ D E +      +   D   H   R  +   +++ + D+N+ AP F      L   E+   G  +  V A D D    + ++Y+   +              F ++  TG+++  +R LDRE  +   + ++  D    P T   T+ + V D NDN P F        I+E+    ++V  R++A D D+   N ++ + +     + + R+ +P+      G +   + LDRE   +Y + +RA D G P  S   +  + + D ND  P + ++P + H   +T       PP  LI+++ A D D G +  VTY
Sbjct: 1502 VEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEGAFVVDAA---SGVLRASRRLDREERASYLLTVRASDGTHATDAR-LSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGGLA---ATARLYVNVLDANDNAPSVQNDS--LAAEVPEDAPPGTSLLRISATDDDEGVNAELEFS-ISSGDPEGRF-AVGND-GQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALA-PEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRL-VRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVL-RLSAWDPDEGA-NGELRYDIASGDPTGDFRL-DPVL-----GTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTVHARENT-----QGPP-VLILQVVARDDDLGSSGQVTY 2092

HSP 3 Score: 170.244 bits (430), Expect = 7.920e-43
Identity = 181/683 (26.50%), Postives = 299/683 (43.78%), Query Frame = 1 
Query:  367 TIMAKD--KSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADAT-SANRVHQYIFKEPTGTFNLDQSRLPSIGLIVK-KPLDYEVKSQYFATLEACDTNKQCNTQ--ALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---------PIGQFQLFLRASDNGRP-PRHNETSLFIFI 2364
            TI+A D  K   +S + ++ V V+D ND+ P+F        ++E  P G Y+    A+DAD+  +A   +  +     G F++D+S     GL+     +D EV S     + A D   Q  T   +L + +LD ND  P F+Q +Y    +EN   G  +++V A D D      + Y F        R  F +   TG +   K L  +  ++Y   V A D+ +     + A + + V DLNDN P    +   + I  NE      + T+  TD D G N  V  QL       F+++AV   +   S+  S D E     + ++   D G  R  +   + + V D  +  P F +D     + EN   G  +  VSAS  D +A + Y   +G+    F+I+   G+I +    +DRE     ++ ++   A      G+ +V + V D N++ P F   S   +I+E+    S+    + ATDKD  + N +V +++      +        F +   G++    +LDRE    Y++ + A DTG+  LS+     + V D NDN P +      +   +  +       G L+  +QATD D G N  VTYS     ++ F L+  TG +   R+              F   + A+D GRP P  +  ++ +F+
Sbjct:  309 TILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDES----TGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPL-GSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPG-GTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAV---STRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSGDQRGSFSIEWSGGRIFTA-NAIDREEQAFYQLRVV---ANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFS-VRATDKDSGK-NGEVKYEIGEGNGGEK-------FGIFPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLF------NSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYS-FEKPQVNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFV 962

HSP 4 Score: 169.859 bits (429), Expect = 1.014e-42
Identity = 168/662 (25.38%), Postives = 296/662 (44.71%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYE------NEREIKAEIECYDHGSPRNVAHKS-LNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN--NKLLFILNQVTGELRVA----RLLPIGQFQLFLRASDNGRPPRHNETSL 2352
            + ++V+D  D  P F +   +  V EN   G  +    A   D  +AN  +  +  +  G+F+++ S      +     +D E +  ++      ++       ++ + V D N++ P F +  Y++ I E+ PV  +  +V A DKDS    ++ Y   E+ + N    F I  + G + ++ +L  + R++Y   V A D        +V  + + V D+NDN P   S S        E +    +  +Q TD D G N  V+    +  +N F LD   +E   ++S+R FD E              +   D G P+ +  ++ + V V+D+N+  P+F K   +  + E+      +L+V+ASD D      L+Y+   G     FT+D  TGQI + +  LDRE      + +  TD+  +P    CTV ++VLDENDNPP F +     +  E+ +   ++   + A+D+D     +     +++   + N   +  I + T  G +   ++LD E    Y + + A D G P  S+     ++V D NDN P ++       G    +I  N P G  +I + A DPD   N  + YS+         F ++  +GE+  A    R +  G F++ +RA+D   P     ++L
Sbjct:  644 VTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLD-LNANVTYLIVSGDQRGSFSIEWS---GGRIFTANAIDRE-EQAFYQLRVVANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKY---EIGEGNGGEKFGIFPD-GQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSV-TVNVTVLDVNDNKPLFNSSSYVFHF-CEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVN-FELD---SETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQI-TLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALES-TRVGELLITLTASDEDTGPSGD-----VRYAIVAGNTHATFAIDRST--GSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLP------GDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSAL 1275

HSP 5 Score: 168.318 bits (425), Expect = 3.074e-42
Identity = 180/640 (28.12%), Postives = 277/640 (43.28%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPK-QTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKK---------PLDYEVKSQYFATLEACDTNKQCNTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL---SGNSKIEINETDPPRELFTL-QVTD-DDIGVNANVSCQLL-QQYINDFRLDAVGNEIYSLSSIRS-FDYENEREIKAEIECYDHGSP-RNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISEN-LSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGEL 2259
            + V V D NDN P F +P    V   E+  +G  + LD A+D D    N V+ + +K  +G    ++ RL     + K+         PLD E    Y   ++A D         L+++V   D NDN P+F +  Y+  + E+ PVG  +          DL ++   G   L+             TG +  ++ L  + R++Y   + AAD          A   I++ D+NDN P I  +          ++E+  P  +  L  VTD D    N  +S  ++       F L A G     +  + S  D E        I   D+G P    A  SL V+V D+N+ APRF        L E    G  +  V+A D D    A L+YS  +G    +F++D  TG + +   ++DRE+   + +NI   D    PKT   ++ + +LD ND PP F     V    EN L     V   ++A D D  E N  V +       +Q R     +F++ + +G++ T+K LDRE    Y + ++A D G P L +    T+ V D NDN P +  P+      +  +I  N P G  +  + ATDPD G N  V Y +   +   F +N VTG +
Sbjct:    9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRD-VGPNGVNHHAYKIVSGN---EEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAAL---------RDLLHR---GRGPLA-------VPFDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPL-SGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTD-GKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVV--SVSAADSDLGE-NGTVRYNFDPDMPAQYRE----MFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFY-PVQ-----YFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAVTGAV 610

HSP 6 Score: 166.392 bits (420), Expect = 1.077e-41
Identity = 178/691 (25.76%), Postives = 308/691 (44.57%), Query Frame = 1 
Query:  370 IMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEA--IDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSL--SSIRSFDYENEREIKAE----IECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSA--VLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVER------IEINIIVTDAIE-NPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYS-VMNNNKLLFILNQVTGELRVARLLPIGQFQLF---LRASDNGRPPRHNETSLFIFI 2364
            + A+D+ S     +  + V V D NDN P F   +   ++ ENEP G  +    A D D  +   V   +       F ++     +  +  +  LD E ++ Y   + A D    +  +   + I V D  D  P+F++ +Y   + EN   G  + +V A  +D ++++   I+ G       + R +F I  + G I     +  + +  Y+ +V A +   +A     A++ + V D+N+++P     S   ++ I E +P     F+++ TD D G N  V  ++ +           G E + +         YE +RE + E    +   D G     +  ++NV V D+N+  P F          E +E G  +  V A+D D  +   + YSF  +P   F +D  TG+I S +R  DRE + R         +++ TD     P   + TV + V D NDNPP F       ++SE+ S+ +++  R+ A+D D+  +N  + + +    +          F V  S G+I  +  LDRE   +YT+ + A D+G   L+A     + V D+NDN P +   L S   + +  +      G L+I L A+D D G + +V Y+ V  N    F +++ TG + +AR L     +L+   + A D GRPPR + T L + +
Sbjct:  524 VQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGDAARFQVNAV---TGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDLNANVTYLIVSG-------DQRGSFSIEWSGGRIFTANAIDREEQAFYQLRVVA-NSGGVAGE---ASVSVLVHDVNNHAPVFDRAS--YEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGN---------GGEKFGIFPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFE-KPQVNFELDSETGRIAS-LRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLL-RVTASDVDEG-VNGALRYAINEGNEGGK-------FTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRV------GELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHV 1172

HSP 7 Score: 157.532 bits (397), Expect = 5.835e-39
Identity = 155/567 (27.34%), Postives = 249/567 (43.92%), Query Frame = 1 
Query:  730 LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-----RELF-TLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNE--IYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPK---TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ--HTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLL-FILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            +EI V D NDN P F+  E ++E+ EN   G+ I  + A D D      + Y     S+      F++   +G ++  ++L  + R  Y   V A+D      H   A + + V+D NDNSP+ +  +     ++ E   P     R +  T+   D D G    V+  L     +D+   A G      +L+  R  D E+           D G     A   L V+V D N+ AP  + D    ++ E+   G ++L++SA+D D    A L++S + G+P   F +  + GQ+ S  R LDRE      + + V+D   +P    +    V + + D NDN P F   S    ++   S    V   + A D D    N+ V + L                 F + T +GE+  V++LDRE   +Y + + A D G P L++     + V D NDN P +  P       +   I  + PPG  +++L A DPD G N  + Y + + +    F L+ V G L VAR L       ++L +RA D G P R +  S+ + ++
Sbjct: 1502 VEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEG----AFVVDAASGVLRASRRLDREERASYLLTVRASDGT----HATDARLSVAVRDANDNSPRFSRHA--YSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGG--LAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVG-NDGQL-SVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFT--SPRSALAPEDSPVGAVVATVQAVDPDSGR-NSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRF--PRRE----YEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLS 2045

HSP 8 Score: 131.724 bits (330), Expect = 4.590e-31
Identity = 165/645 (25.58%), Postives = 269/645 (41.71%), Query Frame = 1 
Query:  367 TIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACD-TNKQCNTQALE-IHVLDQNDNYPS-----FSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELS----DNNIRNTFII-TENTGSIKLQKKLSAKVRQK---YKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVT--DDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGE-PNDY---FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK 2223
             + A+D  S +    + ++V+V D NDN P F KP    +VAE+ P+G  L             + +H+       G   L     P  G++  ++PLD+E + QY  +L A D  N   + +A   I +LD NDN P+              + E+   G     V   D DS   N       ELS      N R  F++       +++ K  S   R++   Y   + A+D        A A++ + V D+ND++P+      ++         P   +   VT  D D G+NA +   ++    ND    +V      +++    D E    +   I   D G+    A+ SL V + D+N+  P F +       +EN   G  ++ VSA+D D   +  ++Y+F  + P  Y   F +D  TG++ + ++ LDRE +E   + +   D    P      V + V D NDN P F  +    +I EN          + ATD D+   N  V +QL  T     R      F+V   +G + T   LDRE    Y +++ A D G     +    TI V D  D  P +          ++  +  N  PG L+  + A+  D   N+NVTY +++ ++
Sbjct:  105 AVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALR------------DLLHR-------GRGPLAVPFDPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANG------ELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFAL---SAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSG--NDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTT-LKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILEN-EPGGTAVTTVTATDPDRGA-NGTVRYQL--TAGDAAR------FQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFAR------DDYSFVVFENVAPGTLVGSVSASTLDL--NANVTYLIVSGDQ 700

HSP 9 Score: 131.339 bits (329), Expect = 6.839e-31
Identity = 151/611 (24.71%), Postives = 244/611 (39.93%), Query Frame = 1 
Query:  253 FLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEP---------IGFYLYLDRALDADATSANRVHQYIFKE-----PTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKM--AMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLL----------QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSA--VLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFD 1995
            F+  +  G L  S R+D E          E    +L  T+ A D +   +    + V+V D NDN P+F +   + +VAE+           IG  L    A DAD+     V   +          G F L     P  G + V +PLD E ++ Y     A D      T  L ++VLD NDN PS        E+ E+ P G  ++ + A D D  +  ++ +    +S  +    F +  N G + + + L  + +  Y   V  +D+     A   +   + + + D+NDN+P  TS    S +   ++     + T+Q  D D G N+ V   L                 F L+ V  E+     +R  D E  +     +   D G P   +  +L V V D N+ APRF +   +  + E+   G  +L++SA D D  A   L+Y   +G+P   F +DP  G +    R LDRE     E+ +   D     ++   +V + + D ND  P F       +  EN      +  ++ A D D    + +V +      D          F V+  G +  ++ LDRE    + + I A D
Sbjct: 1563 FVVDAASGVLRASRRLDRE----------ERASYLL--TVRASDGT--HATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVL----AGDADSGPFGEVTYALAPSEDSDWADGAFGLH----PVTGALNVTRPLDRESRACYVLRARATDGGGLAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEF---SISSGDPEGRFAVG-NDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSP--RSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEV---RLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVA-RPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTVHARENTQGPPVLILQVVARDDDLGS-SGQVTYAAAGGNDGGA-------FSVSPDGHVHLLRSLDREAQPQHVLIITATD 2133

HSP 10 Score: 113.62 bits (283), Expect = 1.509e-25
Identity = 172/686 (25.07%), Postives = 282/686 (41.11%), Query Frame = 1 
Query:  388 SSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQA--LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQK-YKFKVFAADKMAMAFH---KAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLL-QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRN-VAHKSLNVHVKDINEFAPRFEKDFQK-LKLLENREQGHNILQVSA---------SDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIEN--------PKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPG-----YLIIKLQATDPDYGENSNVTYSVMNNNKL-----LFILNQVTGELRVARLL---PIGQFQLFLRASDNG 2322
            +S  + S  + V V D+NDN P+F +   +V+  E+  +G  L    A D D   +  V   I    T  TF +D+S   +  + + + LD+E +  Y   + A D  +   + A  L +HV D NDN P+F   +    I+EN P+G ++I V A D D+D+  ++ Y             F I   +G I    ++  +V    ++  V A DK A+  H    A+ N+ + V D NDN+P+  + +    ++         + TLQ +D D   NA V   +        FRLD     I + + +          ++         +PR   A  ++  +    N   PRF +D++  + LL    QG  I   S+          + +G  V      G    +  I+P     +       R M   I  + +++   +N        P +    V I V D NDNPP F        + EN +   +V   ++ATD D+ + N  V + +           SE  F V   SG +   ++LDRE   +Y + +RA D      +     ++ V D NDN P +    S H   ++ ++  ++ P       +I  + A D D G    VTY++  +         F L+ VTG L V R L       + L  RA+D G
Sbjct: 1054 TSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRS---TGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAH--FTIDPESGEICTAAEIDREVTGGLFEVTVRATDK-AIPVHTRRSALKNVTVLVTDENDNAPRFVTPTA-ILVDGLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTGIIETSTELDRESGHGAFTLEVVAVEAKAAAPRTQRAENTIIANSMTFNHPLPRFPQDYESPINLL----QGQTIPMPSSYLFLRHHLDWEPEGQLVFFTLLLGVTRGHGVINPLDAPWRVSFDLTARCMF--IVFSSLLSSLRDNGAGSFIRPPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEEN-TGEGEVIFTLSATDADQGQ-NALVTYSVLSG--------SEGAFVVDAASGVLRASRRLDREERASYLLTVRASDG---THATDARLSVAVRDANDNSPRF----SRHA--YSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGG 1707

HSP 11 Score: 83.9593 bits (206), Expect = 1.907e-16
Identity = 106/452 (23.45%), Postives = 182/452 (40.27%), Query Frame = 1 
Query: 1057 IFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNA-NVSCQLLQQYINDFRL----DAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPT----FIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPML-SAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTG----ELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFI 2364
            + + V D+NDN+P      G  ++   E     R++      D D+G N  N     +     + RL             L++    D E        ++  D GSPR      +NV V+D N+  P FEK   +  + E+   G  +  +    R   AV               DP TG + S  + LD E   +  +++   D    P +G+ T +I++LD NDN P     ++  +      +  ++   V   +  TD D    N ++   +    +  +  +  P   V     +    +LDRE    Y + I A D G P+  SA  +  +YV D ND+ P +     +        ++  +P G  +  + A D D G N+ + YS+++ N L  F +++ TG    + +V R +      L + A D G  P+   TSL + +
Sbjct:    9 VRVVVGDVNDNAPSFPE-PGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALRDLLHRGRGPLAV-------------PFDPKTGMV-STRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAP--GVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAA------ALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREV-ASSVVLNISAQDQGAQPKTAYTSLTVTL 436

HSP 12 Score: 70.4774 bits (171), Expect = 2.228e-12
Identity = 87/354 (24.58%), Postives = 148/354 (41.81%), Query Frame = 1 
Query: 1381 LNVHVKDINEFAPRF-EKDFQKLKLLENREQGHNILQVSASDRD----GSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRR-----LDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPD----WVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDY-GENSNVTYSVMNNN-KLLFILNQ--VTGELRVARLLP------IGQFQLFLRASDNGRP-PRHNETSLFIFIN 2367
            + V V D+N+ AP F E    ++   E+   G  +L  +A DRD    G     Y       +   + P     ++ +       LDRE      + +   D     + G+  V + V D NDNPP F   +   +++E+    + +R           ++ ++    L   FD +             +G + T + LD E    YT+ +RA D G P LS      I + D NDNDP     ++ P +      + ++  ++ PG +   +  TD D    N  ++ S++  N +  F+L+   V G LRV ++        I  + L + ASDNG+P  R    SL +++N
Sbjct:    9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALR-----------DLLHRGRGPLAVPFDPK-------------TGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAA-----RSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPG-LRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVN 332
[Close]
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 171.014 bits (432), Expect = 4.541e-43
Identity = 176/686 (25.66%), Postives = 286/686 (41.69%), Query Frame = 1 
Query:  355 ILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHV-LDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKL--------DREINHN-YTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTG--ELRVARLLPIGQ-FQLFLRASDNGRPPRHNETSLFIFI 2364
            +L+ T +    +   S S  + V+V+D ND+ P+F+          + P G  ++   A DADA     +   +    +  F++D  R    G+I         +     T+   D      +    + V       +P F+         E+ P G  I  V A  + S     + Y  H  S  N+ + F +   +G + + + L  + +  Y+  V A D     F  A   + + V D+NDN+P+ +S    +K+   E  PPR +  L   D D G+N  V   ++   I N FR++    EI S+S++   D EN    +  ++  D GSP       + + V D N+ +PRF + F    + E+   G  +L+VS  D D    A + +S   +P+  F+I P TG+I    RRL+RE      + +  +D      T    V I V D NDN P F   +      E     + V  R++A+D D D  N +V F ++    ++N R+        +SGEI +V+ L            N N Y+  + A D G P LS+    TI +   N N P ++         ++  + A    G  I+ + A DPD   N  + YSV+  N          G   LR +     G  F + + A D GRPP  +  +  I +
Sbjct:   96 VLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRR----GVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAA--RSSRRAGPVSY--HLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPF-SAYLKLEVDVLDINDNAPEFSSSRFWAKVP--ENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTL---DRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-HVREDAAVGFPVLRVSTLDADEGPNAAITFSLL-DPSLPFSIHPSTGEITVS-RRLNREDRSGYAVKVRASDPAWTVST---DVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALV-ARVSASDAD-DGANGQVFFFMRS--QTENFRVGR------DSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRER------YSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISV 745

HSP 2 Score: 171.014 bits (432), Expect = 4.580e-43
Identity = 182/674 (27.00%), Postives = 290/674 (43.03%), Query Frame = 1 
Query:  355 ILKTTIMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQ--ALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLL-QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIE--CYDHGSPR--NVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLK-YSF---TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILN--QVTGELRVARLLPIGQFQLFLRASDNGRPP 2331
            I   T+ A+D+     S      +SV+++N   P+F  P   +++ EN P G  L    A D DA   N    Y      G+   D SR     L+V + LDYE +  Y  ++ A D   Q  T+   + I V D NDN P  +  +Y   I EN P G  ++ ++A+D DS      +Y      D+   + F++ + TG +  Q  L  + +Q Y+  V A +     FH + A + +++  +N+  P+      N    ++E+ P    + ++  TD D G++  V   L  +     F ++    EI     I S   + ERE  A +     + GS R  +V    +NV + D N+  P F       ++ E    G +++ VSA D D     + +SF   +G     F+I+ HTG I      LDRE V    + ++  D  E P TG   V++ + D NDN P  +  S    ++EN  +   V   + A D D         FQL  + D   R      F ++ SG + T + +DRE    + + +   D G P L++     + V DQNDN P     +  H     VN   +  PG  I  ++  DPD  +  N   +    N   F  N  ++  + R A     G+F+L +R SD    P
Sbjct:  720 IFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDA-GVNGAIVYSIASGDGSGLFDISRASGDVLLVGE-LDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSL----DDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFN-YPDTFHYSTAQVHVQITGVNEYFPRFVQREYN--FVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEI-----IVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVA-SPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSA--KVTENQPAGMTVL-NLEAGDPDLPPNKGPYTFQLLGS-DPAWRG----YFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN-PSEARDVRVH-----VNYFGSPFPGGFIGDVRPRDPDISDRFNCDLTSGPFNVFSFQPNTCRLISQPRSAE----GRFELSVRGSDGKHSP 1359

HSP 3 Score: 162.54 bits (410), Expect = 1.674e-40
Identity = 183/673 (27.19%), Postives = 281/673 (41.75%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIG-LIVKKPLDYEVKSQYFATLEACD---TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-IND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT--VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL----PIG--------QFQLFLRASDNGRPPRHNETSLFIFI 2364
            + V V D+NDN P+F   +    V E+ PIG  + L  A DADA   N +  Y  +   G F+++    PS G +I    LD E +  Y   + A D   T    ++  L + V D ND+ P F    Y      + P G  + AV A D D+     + +        +    F +    G I   + L    R      V  +D  A     AV  + ++ +D  +  P+     G       E  PP    T+ V          VS  L     + D F +D    E+   S  R+ D+E +   +  +E  D G P   A+  L V V DIN+ AP F       K+ EN      I+ ++A D+D      + YS   G   + F ++P++G+I+S +  LDRE V   E+ +  TD      T  CT  V+I V DENDN P F  I    ++ E+ +    V  R++  D D+   N  + F L           S P      +GEI   ++L+RE    Y V++RA D   P  +   + TI V+D NDN P +          + +     S    L+ ++ A+D D G N  V +  M +    F + + +GE+   R L    P G        ++   + A D GRPP  ++ ++ I I
Sbjct:   12 VTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADA-GLNAIISYRLRGGDGHFSVN----PSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSL----SGSASAGFSVDPRRGVIHAARALQGP-RDDLTLTVRVSDGGAPP-RSAVTTVTVRFRDAGE-FPRFA--PGPRSFSFREDQPPGTTITV-VAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEV---SVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPP-RTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRS-VSTLDRENVASYELTVKATD--RGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-HVREDAAVGFPVL-RVSTLDADEGP-NAAITFSLLDP--------SLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQT------AYYIEFPEPSEGEALVARVSASDADDGANGQVFF-FMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINI 641

HSP 4 Score: 162.54 bits (410), Expect = 2.019e-40
Identity = 139/525 (26.48%), Postives = 233/525 (44.38%), Query Frame = 1 
Query:  718 NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPR--ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSA--SDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL 2277
             T  + + V D+NDN P F   E +  + E+ P+G  +  V A D D+ L N II       D +    F +  +TG I     L  + R+ Y  +V A D        + A + + V D+ND++P+  +      +    +  P    +F +   D D G N ++   L       F +D     I++  +++        ++   +   D G+P   A  ++ V  +D  EF PRF    +     E++  G  I  V+A  S R G      +  G   D F +DP +G++ S  R LD E     E+ +   D+   P +    + ++VLD NDN P F        + EN    + V   + A DKD   IN +V + +       +  I   +F+V   SGEI +V  LDRE   +Y + ++A D G P         I V D+NDN P +    S+H       +  ++  G+ ++++   D D G N+ +T+S+++ + L F ++  TGE+ V+R L
Sbjct:    8 GTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGL-NAIISYRLRGGDGH----FSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAP---YVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQG----PRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEV-SVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV--LTAVDKDSG-INGQVDYSII------DGNIGN-VFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAH-------VREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPS-LPFSIHPSTGEITVSRRL 500

HSP 5 Score: 127.102 bits (318), Expect = 1.207e-29
Identity = 179/729 (24.55%), Postives = 305/729 (41.84%), Query Frame = 1 
Query:  178 IDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSS-DQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIA-VEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKL---------SAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI-----------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKK-LDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLL-FILNQVTGELRVARLL 2277
            ID  IGN+  ++P                 + G++   S +D E + A +E+           T+ A D+ S  Q  ++ + +SV+D+NDN P+F +   + +V E+  +GF +     LDAD    N    +   +P+  F++     PS G I V + L+ E +S Y   + A D     +T  + I V D NDN P F Q  Y IE  E    G+ ++A V A D D     ++ +     ++N     F +  ++G I   + L         S     KY F V A D+       + A + I +   N N+P+            T  +G   ++++  DP R++   Q+    +G NA+            F +DA G     L    S   +        +E  D G P   +  +  + V + N++APRF     +L L EN   G ++ +V+A+D D      + YS  +G+ +  F I   +G +   +  LD E  +   +++   D     KT    V I V D NDNPP  ++ S  +  I EN  S + V   +     D D  +N V     ++ D         +F + +   +LT +  LD E    Y + +RAF+       +     + +   N+  P +V         +   ++ ++P G  +  + ATD D G +  V Y +   ++   F +N+ TGE+ V+  L
Sbjct:  375 IDGNIGNVFRVNP-----------------NSGEIRSVSTLDRENV-ASYEL-----------TVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQ-IFSAHVREDAAVGFPVLRVSTLDAD-EGPNAAITFSLLDPSLPFSIH----PSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTD-VTIVVDDVNDNAPRFGQTAYYIEFPEPSE-GEALVARVSASDADDGANGQVFFFMRSQTEN-----FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPL-SSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDV-NGQIAYSVVGGNAS----------RRFDVDAGG----FLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLL-VGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPP-MLNASDYYPVIPENAPSGTTV---LVMDAVDADSPSNAVTM---YSLDDGE----ADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQRE------YNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQL 1027

HSP 6 Score: 114.39 bits (285), Expect = 1.079e-25
Identity = 107/449 (23.83%), Postives = 198/449 (44.10%), Query Frame = 1 
Query: 1045 AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHG-SPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFI 2364
                + + V+D NDN P+  +     +  + E  P   ++  +  TD D G+NA +S +L +     F ++    +I + +S+   D E       E+   D G +P   +  +L V V D+N+  PRF           +   G  +  V+A D D      L++S +G  +  F++DP  G I +   R  +   + + + + V+D    P++   TV +   D  + P  F      F+  E+    + +    A + +    ++    + L    +  +      +F V  +SGE+   + LD E  H+Y + + A D+G P  SA+    + V D NDN P++ +            +  N+PP  +++ L A D D G N  V YS+++ N   +F +N  +GE+R    L    +  ++L ++A+D G P +H    + I +
Sbjct:    8 GTGTVTVLVEDENDNLPRFGA--AELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL-RGGDGHFSVNPSTGQIITTASL---DREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAA--RALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFP-RFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVS----YHLASGGNLGD------VFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSS------SRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISV 430

HSP 7 Score: 102.449 bits (254), Expect = 4.103e-22
Identity = 122/510 (23.92%), Postives = 209/510 (40.98%), Query Frame = 1 
Query:  271 KGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTNKQCNTQALEIHV--LDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNAN--------VSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD---GSAVLKYSFTG-EP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDI 1743
             GD++L   +D ET            E +   ++ A D     ++E   + +SV+D NDN P          + EN P G  + +  A+DAD+ S N V  Y   +     F L+Q      G++  +  LDYE K  Y  T+ A +     +    ++HV     N+ +P F Q+EY   + E+ PVG  + +V A D+D+ +   +   F+ L   +    F + E+TG I +  +L  +       +V A +  ++     V  + + V   + N P + S S      ++E           V    +GV+A+         +   L Q  N  R  ++      +      D E+       +   D G P       + V ++D+N+  P         K+ EN+  G  +L + A D D         +   G +P    YF++   +G +K+  R +DRE      + + + DA   P T   T+ + VLD+NDNP    D+
Sbjct:  809 SGDVLLVGELDYET------------EKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPS-NAVTMYSLDDGEADLFVLNQK----TGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTV---FYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFD-VDEVLVNVAITDANDPPVFS-SALYHGRVSE--------AASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLT--SSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLS-SSGLLKTA-RPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSEARDV 1284

HSP 8 Score: 80.1073 bits (196), Expect = 2.911e-15
Identity = 81/336 (24.11%), Postives = 142/336 (42.26%), Query Frame = 1 
Query: 1351 GSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPK-TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDE-INNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL--LFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPP 2331
            G PR     ++ V V+D N+  PRF     +  + E+   G ++  V+A+D D    A++ Y   G  + +F+++P TGQI +    LDRE  E   + +   D    P  +   T+++ V D ND+ P F++   V     +  + + V    A T +D D   N  + F L  +  +         F V     ++   +  +    + T+ +R  D G P  SA    T+   D  +  P +        G  + +   + PPG  I  + A          V+Y + +   L  +F ++  +GE+ V R L       ++L + A D+G PP
Sbjct:    2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGG-DGHFSVNPSTGQIIT-TASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAV---FAVTARDADAGPNGDLRFSLSGSASAG--------FSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAP------GPRSFSFREDQPPGTTITVVAARSSR--RAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPP 315
[Close]
BLAST of Protocadherin vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 171.014 bits (432), Expect = 5.015e-43
Identity = 176/686 (25.66%), Postives = 286/686 (41.69%), Query Frame = 1 
Query:  355 ILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHV-LDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYI-NDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKL--------DREINHN-YTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTG--ELRVARLLPIGQ-FQLFLRASDNGRPPRHNETSLFIFI 2364
            +L+ T +    +   S S  + V+V+D ND+ P+F+          + P G  ++   A DADA     +   +    +  F++D  R    G+I         +     T+   D      +    + V       +P F+         E+ P G  I  V A  + S     + Y  H  S  N+ + F +   +G + + + L  + +  Y+  V A D     F  A   + + V D+NDN+P+ +S    +K+   E  PPR +  L   D D G+N  V   ++   I N FR++    EI S+S++   D EN    +  ++  D GSP       + + V D N+ +PRF + F    + E+   G  +L+VS  D D    A + +S   +P+  F+I P TG+I    RRL+RE      + +  +D      T    V I V D NDN P F   +      E     + V  R++A+D D D  N +V F ++    ++N R+        +SGEI +V+ L            N N Y+  + A D G P LS+    TI +   N N P ++         ++  + A    G  I+ + A DPD   N  + YSV+  N          G   LR +     G  F + + A D GRPP  +  +  I +
Sbjct:   96 VLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRR----GVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTITVVAA--RSSRRAGPVSY--HLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPF-SAYLKLEVDVLDINDNAPEFSSSRFWAKVP--ENTPPRTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTL---DRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-HVREDAAVGFPVLRVSTLDADEGPNAAITFSLL-DPSLPFSIHPSTGEITVS-RRLNREDRSGYAVKVRASDPAWTVST---DVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALV-ARVSASDAD-DGANGQVFFFMRS--QTENFRVGR------DSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRER------YSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISV 745

HSP 2 Score: 170.629 bits (431), Expect = 5.461e-43
Identity = 182/674 (27.00%), Postives = 290/674 (43.03%), Query Frame = 1 
Query:  355 ILKTTIMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQ--ALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLL-QQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIE--CYDHGSPR--NVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLK-YSF---TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILN--QVTGELRVARLLPIGQFQLFLRASDNGRPP 2331
            I   T+ A+D+     S      +SV+++N   P+F  P   +++ EN P G  L    A D DA   N    Y      G+   D SR     L+V + LDYE +  Y  ++ A D   Q  T+   + I V D NDN P  +  +Y   I EN P G  ++ ++A+D DS      +Y      D+   + F++ + TG +  Q  L  + +Q Y+  V A +     FH + A + +++  +N+  P+      N    ++E+ P    + ++  TD D G++  V   L  +     F ++    EI     I S   + ERE  A +     + GS R  +V    +NV + D N+  P F       ++ E    G +++ VSA D D     + +SF   +G     F+I+ HTG I      LDRE V    + ++  D  E P TG   V++ + D NDN P  +  S    ++EN  +   V   + A D D         FQL  + D   R      F ++ SG + T + +DRE    + + +   D G P L++     + V DQNDN P     +  H     VN   +  PG  I  ++  DPD  +  N   +    N   F  N  ++  + R A     G+F+L +R SD    P
Sbjct:  720 IFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDA-GVNGAIVYSIASGDGSGLFDISRASGDVLLVGE-LDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSL----DDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFN-YPDTFHYSTAQVHVQITGVNEYFPRFVQREYN--FVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEI-----IVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVA-SPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTSSA--KVTENQPAGMTVL-NLEAGDPDLPPNKGPYTFQLLGS-DPAWRG----YFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDN-PSEARDVRVH-----VNYFGSPFPGGFIGDVRPRDPDISDRFNCDLTSGPFNVFSFQPNTCRLISQPRSAE----GRFELSVRGSDGKHSP 1359

HSP 3 Score: 162.54 bits (410), Expect = 1.897e-40
Identity = 183/673 (27.19%), Postives = 281/673 (41.75%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIG-LIVKKPLDYEVKSQYFATLEACD---TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQY-IND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCT--VIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL----PIG--------QFQLFLRASDNGRPPRHNETSLFIFI 2364
            + V V D+NDN P+F   +    V E+ PIG  + L  A DADA   N +  Y  +   G F+++    PS G +I    LD E +  Y   + A D   T    ++  L + V D ND+ P F    Y      + P G  + AV A D D+     + +        +    F +    G I   + L    R      V  +D  A     AV  + ++ +D  +  P+     G       E  PP    T+ V          VS  L     + D F +D    E+   S  R+ D+E +   +  +E  D G P   A+  L V V DIN+ AP F       K+ EN      I+ ++A D+D      + YS   G   + F ++P++G+I+S +  LDRE V   E+ +  TD      T  CT  V+I V DENDN P F  I    ++ E+ +    V  R++  D D+   N  + F L           S P      +GEI   ++L+RE    Y V++RA D   P  +   + TI V+D NDN P +          + +     S    L+ ++ A+D D G N  V +  M +    F + + +GE+   R L    P G        ++   + A D GRPP  ++ ++ I I
Sbjct:   12 VTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADA-GLNAIISYRLRGGDGHFSVN----PSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSL----SGSASAGFSVDPRRGVIHAARALQGP-RDDLTLTVRVSDGGAPP-RSAVTTVTVRFRDAGE-FPRFA--PGPRSFSFREDQPPGTTITV-VAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEV---SVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPP-RTIVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRS-VSTLDRENVASYELTVKATD--RGSPTQHCTVKVLISVTDENDNSPRFTQIFSA-HVREDAAVGFPVL-RVSTLDADEGP-NAAITFSLLDP--------SLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQT------AYYIEFPEPSEGEALVARVSASDADDGANGQVFF-FMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINI 641

HSP 4 Score: 162.155 bits (409), Expect = 2.327e-40
Identity = 139/525 (26.48%), Postives = 233/525 (44.38%), Query Frame = 1 
Query:  718 NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPR--ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSA--SDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL 2277
             T  + + V D+NDN P F   E +  + E+ P+G  +  V A D D+ L N II       D +    F +  +TG I     L  + R+ Y  +V A D        + A + + V D+ND++P+  +      +    +  P    +F +   D D G N ++   L       F +D     I++  +++        ++   +   D G+P   A  ++ V  +D  EF PRF    +     E++  G  I  V+A  S R G      +  G   D F +DP +G++ S  R LD E     E+ +   D+   P +    + ++VLD NDN P F        + EN    + V   + A DKD   IN +V + +       +  I   +F+V   SGEI +V  LDRE   +Y + ++A D G P         I V D+NDN P +    S+H       +  ++  G+ ++++   D D G N+ +T+S+++ + L F ++  TGE+ V+R L
Sbjct:    8 GTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGL-NAIISYRLRGGDGH----FSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAP---YVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQG----PRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEV-SVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV--LTAVDKDSG-INGQVDYSII------DGNIGN-VFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFSAH-------VREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPS-LPFSIHPSTGEITVSRRL 500

HSP 5 Score: 126.716 bits (317), Expect = 1.540e-29
Identity = 179/729 (24.55%), Postives = 305/729 (41.84%), Query Frame = 1 
Query:  178 IDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSS-DQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIA-VEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKL---------SAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI-----------TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFN-ISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKK-LDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLL-FILNQVTGELRVARLL 2277
            ID  IGN+  ++P                 + G++   S +D E + A +E+           T+ A D+ S  Q  ++ + +SV+D+NDN P+F +   + +V E+  +GF +     LDAD    N    +   +P+  F++     PS G I V + L+ E +S Y   + A D     +T  + I V D NDN P F Q  Y IE  E    G+ ++A V A D D     ++ +     ++N     F +  ++G I   + L         S     KY F V A D+       + A + I +   N N+P+            T  +G   ++++  DP R++   Q+    +G NA+            F +DA G     L    S   +        +E  D G P   +  +  + V + N++APRF     +L L EN   G ++ +V+A+D D      + YS  +G+ +  F I   +G +   +  LD E  +   +++   D     KT    V I V D NDNPP  ++ S  +  I EN  S + V   +     D D  +N V     ++ D         +F + +   +LT +  LD E    Y + +RAF+       +     + +   N+  P +V         +   ++ ++P G  +  + ATD D G +  V Y +   ++   F +N+ TGE+ V+  L
Sbjct:  375 IDGNIGNVFRVNP-----------------NSGEIRSVSTLDRENV-ASYEL-----------TVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQ-IFSAHVREDAAVGFPVLRVSTLDAD-EGPNAAITFSLLDPSLPFSIH----PSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTD-VTIVVDDVNDNAPRFGQTAYYIEFPEPSE-GEALVARVSASDADDGANGQVFFFMRSQTEN-----FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPL-SSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDV-NGQIAYSVVGGNAS----------RRFDVDAGG----FLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLL-VGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPP-MLNASDYYPVIPENAPSGTTV---LVMDAVDADSPSNAVTM---YSLDDGE----ADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQRE------YNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQL 1027

HSP 6 Score: 114.39 bits (285), Expect = 1.133e-25
Identity = 107/449 (23.83%), Postives = 198/449 (44.10%), Query Frame = 1 
Query: 1045 AVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHG-SPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFI 2364
                + + V+D NDN P+  +     +  + E  P   ++  +  TD D G+NA +S +L +     F ++    +I + +S+   D E       E+   D G +P   +  +L V V D+N+  PRF           +   G  +  V+A D D      L++S +G  +  F++DP  G I +   R  +   + + + + V+D    P++   TV +   D  + P  F      F+  E+    + +    A + +    ++    + L    +  +      +F V  +SGE+   + LD E  H+Y + + A D+G P  SA+    + V D NDN P++ +            +  N+PP  +++ L A D D G N  V YS+++ N   +F +N  +GE+R    L    +  ++L ++A+D G P +H    + I +
Sbjct:    8 GTGTVTVLVEDENDNLPRFGA--AELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRL-RGGDGHFSVNPSTGQIITTASL---DREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAA--RALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEFP-RFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVS----YHLASGGNLGD------VFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSS------SRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISV 430

HSP 7 Score: 102.449 bits (254), Expect = 4.132e-22
Identity = 122/510 (23.92%), Postives = 209/510 (40.98%), Query Frame = 1 
Query:  271 KGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKS-SDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQSRLPSIGLIVKKP-LDYEVKSQYFATLEACDTNKQCNTQALEIHV--LDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNAN--------VSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD---GSAVLKYSFTG-EP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDI 1743
             GD++L   +D ET            E +   ++ A D     ++E   + +SV+D NDN P          + EN P G  + +  A+DAD+ S N V  Y   +     F L+Q      G++  +  LDYE K  Y  T+ A +     +    ++HV     N+ +P F Q+EY   + E+ PVG  + +V A D+D+ +   +   F+ L   +    F + E+TG I +  +L  +       +V A +  ++     V  + + V   + N P + S S      ++E           V    +GV+A+         +   L Q  N  R  ++      +      D E+       +   D G P       + V ++D+N+  P         K+ EN+  G  +L + A D D         +   G +P    YF++   +G +K+  R +DRE      + + + DA   P T   T+ + VLD+NDNP    D+
Sbjct:  809 SGDVLLVGELDYET------------EKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPS-NAVTMYSLDDGEADLFVLNQK----TGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTV---FYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFD-VDEVLVNVAITDANDPPVFS-SALYHGRVSE--------AASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLT--SSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLS-SSGLLKTA-RPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNPSEARDV 1284

HSP 8 Score: 80.1073 bits (196), Expect = 2.958e-15
Identity = 81/336 (24.11%), Postives = 142/336 (42.26%), Query Frame = 1 
Query: 1351 GSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPK-TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDE-INNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL--LFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPP 2331
            G PR     ++ V V+D N+  PRF     +  + E+   G ++  V+A+D D    A++ Y   G  + +F+++P TGQI +    LDRE  E   + +   D    P  +   T+++ V D ND+ P F++   V     +  + + V    A T +D D   N  + F L  +  +         F V     ++   +  +    + T+ +R  D G P  SA    T+   D  +  P +        G  + +   + PPG  I  + A          V+Y + +   L  +F ++  +GE+ V R L       ++L + A D+G PP
Sbjct:    2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGG-DGHFSVNPSTGQIIT-TASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAV---FAVTARDADAGPNGDLRFSLSGSASAG--------FSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGEF-PRFAP------GPRSFSFREDQPPGTTITVVAARSSR--RAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPP 315
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751])

HSP 1 Score: 232.261 bits (591), Expect = 7.527e-62
Identity = 213/680 (31.32%), Postives = 324/680 (47.65%), Query Frame = 1 
Query:  370 IMAKDKSSDQS-ESIN-IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQ---CNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKA-----VANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVT-----DDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINN-KVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIG---QFQLFLRASDNGRPPR 2334
            ++A DK  +QS E+I  I ++V D NDN+P F+       V E  PIG  +    A+D+D     +V   I    T GTF ++++     G+I   + LD+EV ++Y   + A D  K+    + Q + I+V D NDN P+F +      I EN P+   +  ++A D DS L ++I Y     S    R  F I   TG I+    +  +   +Y  KV A D+   AF +       A + I ++DLNDN+PK  S +    +E        E F  QVT     D D G   NV  +++      F LD    +   L  I S DYE+  +    I   D GSP   +++  NV V D+N+  P F +D     + EN+  G ++++V+A DRD    A L YS  +G   D F+ID H+G I +    LDRE  +   + +  T      +    +V I V+D NDNPP FI       + EN    S  R     T +D D  NN KVL+ +     S N   ++  F +  S GE+ T  KLDRE   +Y + ++A D   P  +A  N TI++EDQNDN P +         +++  I+  +PPG  I+ L A+D D G N N+ Y++ N+   ++ ++  TG +  A         ++  F  A D G+ P+
Sbjct: 1193 VVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINET----TGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSP---RAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQ---AFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTYVME-------DEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDL---KTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIVTN-SILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPEN----SPARLIYTLTVQDLDYGNNTKVLYSIM----SGN---TDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVF------QQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPK 1834

HSP 2 Score: 187.193 bits (474), Expect = 9.647e-48
Identity = 191/685 (27.88%), Postives = 318/685 (46.42%), Query Frame = 1 
Query:  310 TICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQ-YFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAV---LKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVI-IEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPML-SAHKNFTIYVEDQNDNDPDW-VTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLL---PIGQFQLFLRASD 2316
            T+  Q E+  E++   L  T+ AKDK +       N+ ++V D NDN P+F      V + E+ PIG   Y     DAD+    RV   +   P   FNLD +   +  L + K +DY   ++ Y   ++A D     + +T  LE+ V+D ND  P F    Y   +LE  P    II V A D DS    +I Y F    D+ +  +     N G I ++ KL  +  ++Y  KV A D        + A++ + V D+NDN+P     S      + E +P    L  +  +D D G N +V+ +   Q +  F +D    +I   ++ +  D E +      I   D GS   V    + V V+D+N+ +P+F K+   + + E+   G ++L + A+D D       + Y     P   F+++  TG + + +  LDRE+  R  ++++ +D   N      T I I VLD NDN P FI+ +    + E L     V   + A D D+ + N KV +++ +         ++  FK+ E +G I T++ LD E+ + Y + + A D G     ++++  TIYVED NDN P +   P+ +        I  N P    +  ++A D D G NS + Y++ + + +  F +N  TG ++    +    I ++ L +RA+D
Sbjct:  758 TLYLQSEVDHEKIPS-LYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSN---TGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAF----DSKVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDH-GTPRRSSSADVKVIVDDVNDNNPHFQQAS--YAFFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQ-VAQFIVDKQTGKI---TTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPK-AFSLNQVTG-VLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKL-PIGSVVAAVLAVDSDQGD-NGKVRYKIVNGN-------TDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITW-------IYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATD 1409

HSP 3 Score: 181.03 bits (458), Expect = 6.940e-46
Identity = 175/692 (25.29%), Postives = 306/692 (44.22%), Query Frame = 1 
Query:  313 ICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIV-KKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAM-AFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFT--GEPNDYFTIDPHTGQIKSGIRRLDREMVER-IEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364
            I    ++  E++  ++ T ++    S   S++ ++ V+++D NDN P F +     ++ EN P G  +    A D D    N +  Y    P   F LD    P  GL+   + LD+EV+S Y   + A D   +     + + + D NDN P F    Y +E  EN  +GQ I  ++AID+DS  F    +   +    N    F + + +G I L K L  + +  Y   V A D     + +KA+ N  I V D+ND  P  +    N  I+   +     +  +     D G NA V   + +   ++  L      +Y  S +   D+E    +   ++  D G+P    + ++ + V DIN+ +P+F      ++L E+   GH    VS  D D   + + SF+    P   F +D +TG + S  + +D     R   + +   D    P++    + ++V+D ND  P F + S   ++ E     S +   + ATD D  E N ++     + FDS   ++    F +   G+I    KLDRE    Y +++ A D G P  S+  +  + V+D NDN+P +          +   +  N P    +  + A+D D G N +VTY   +     FI+++ TG++  +++L       +   + A+D G  PR ++T + + +
Sbjct:  450 ITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPD-IGENSLILYSILTPNTPFFLD----PRKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQ---GNADEVFSV-DGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVN--ITVLDVNDEPPIFSKAEYNFTIQ-EHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQSEV---DHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSNTGAL-SLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNII-EVVATDVDSGE-NGRI----SYAFDS---KVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHF------QQASYAFFVKENEPVATYLGAVSASDSDEGSNGHVTYR-FDTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIV 1109

HSP 4 Score: 176.022 bits (445), Expect = 2.775e-44
Identity = 181/689 (26.27%), Postives = 297/689 (43.11%), Query Frame = 1 
Query:  406 SINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRF-EKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIK-SGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYS-KVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSS--------HGGI--------------HTVNITANSPPGYLIIKLQATDPDYGENSNVTYS--VMNNNKLLFILNQVTGELRVARLLPI----GQFQLFLRASDNGRPPRHNETSLFIFI 2364
            S ++ ++V D+NDN PKF+ P  T+ V EN P    +Y     D D  +  +V   I    T G F + +S   +  L     LD E K+ Y  +++A D      T    I +   DQNDN P F Q  Y   I E  P G  I+ + A DKDS     I+Y       N+    + I   TG +    +    ++Q+Y F   A D+       A+  + IK++D N+++P+ T       I  N +      + T    D D   N  V+ +L     N   L  V +   S+ +   F    +      I   DHGSP    +  + + + +I +  PRF  +   ++ + EN + G  I  V A     + V     +G     F +DP TG I  +    LD E  +   ++++ T        G   + I V+D NDN P F   + +  ++E+  ++  +   ++ ATD D    N KV + +    ++        +F + + +GEI T K LDRE   ++ + IR  D+G+P  S +    + V D NDN P    PLS          G +               T N+ + S PG  I+++ ATD D G N+ + YS  + N++++ + ++  TG +   R + +       Q+ ++A D G PP+     + I I
Sbjct: 1629 STSVRINVMDRNDNPPKFISPVVTLKVPENSPARL-IYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRS---TGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLS----NDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQ-GQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTDKSTNGKVTYRL-DDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPENSKVGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGT-NGKVTYSIWTGNEAG-------VFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDN-PPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIII 2298

HSP 5 Score: 170.244 bits (430), Expect = 1.554e-42
Identity = 193/699 (27.61%), Postives = 305/699 (43.63%), Query Frame = 1 
Query:  328 EMCCEEVECILKTTIMAKDK-SSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQA---LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPK------ITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHG---SPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG--SAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364
            ++   E +     +I+A D  SS + +   + V V D ND  PKF K K +V V E+ P+G  L    A D D    N    Y+       F+L+Q    +  L +  PLD EV  ++   + A D     + +    +EI+VLD NDNYP F  +     + E  P+G  + AV A+D D     K+ Y   ++ + N   TF I E TG I   + L  +V  +Y  +V A D        +   + I V+D NDN P       IT +  N  I  N T       T++  DDD G+N+ +   +  Q     F++++   E   + +    D E   E   ++   D       R     +L + ++D+N+ AP+F        ++E+      +  ++A D D      ++Y         F++D  TG +K  I  LD E V +  ++I  TD    P T      + V+D NDNPP F     +  +SEN  + + V  ++ A D+D    N ++ + +    +     I +       SG I+T   LDRE    Y + + A     P   +  +  I V D+NDN P +++P      + T+ +  NS P  LI  L   D DYG N+ V YS+M+ N    F + + TGEL     L       +QL ++A D   P      ++ IFI
Sbjct: 1075 QVLDREAKASYVFSIVATDGGSSPRVDKTQVTVIVRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQV---TGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDNGKVRY---KIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVT-------TIKAHDDDSGLNSRIWYTIDSQSPRAHFKINS---ETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSR-NLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLKL-IGSLDYEDVPQYTLHISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVV-KVTAYDRDSGS-NAELTYSIPSGVEMDKFSIDK------HSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISP------VVTLKVPENS-PARLIYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFI 1740

HSP 6 Score: 148.673 bits (374), Expect = 6.518e-36
Identity = 191/678 (28.17%), Postives = 287/678 (42.33%), Query Frame = 1 
Query:  403 ESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQSR-------------LPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQ--ALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI---TSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQ---------QYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD-GS-AVLKYSF--TGEPNDY---FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNG 2322
            +S  + V V D NDN P FV+      V       F   L  A+D+D  S +     I     G  F L   R               SIG+      D E    Y   + A D     N     L I V D NDN P FS   Y   I EN  VG  I+ V A DKD     +I Y     SD   +  F I   TG I    +L  + ++ Y   V A DK +     + A + I+V D+NDN+P I    +L G+ ++  N T    ++  + V+D D G N  V+  L             +ND  + AVG         +S D E       +  C D G P     KS  ++V D+N+ AP+F++   + ++ EN      +  V+A D+D GS + L Y+   T E   Y   F IDP +G I +    LDRE + ++ + ++V D    P +  C+VI+ + D NDN P F   S   ++ EN  S S V  ++ A D D  E N+ +L+ +           + P F     G +   + LD E+  +YT ++ A D G    S +    + + D NDN P +  P S     ++V    N+  G  I +L+A D D  + +   + +   N         +G + +A+LL       + L ++A D G
Sbjct:   40 KSYTVLVYVQDLNDNSPSFVRGTSAKLVVFENDKDFRQKL-IAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGV------DRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDP--QAIFGIHPTTGVIVNNVRLDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENAT-IGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVG---------QSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTAT-DLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVV-QLLAQDPDIGE-NSLILYSILTP--------NTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGG--GRSCNATVHVSLTDLNDNQPVF-DPSS-----YSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGG 679

HSP 7 Score: 137.502 bits (345), Expect = 1.801e-32
Identity = 179/709 (25.25%), Postives = 293/709 (41.33%), Query Frame = 1 
Query:  370 IMAKDKSSDQSESINI-HVSVSDKNDNWPKFV-KPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQSRLPSIGLIV---KKPLDYEVKSQYFATLEACDTNKQC--NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQ--IIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLS----------GNSKIEINETDPPRE----------------LFTLQVTDDDIGVNANV--SCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYE-NEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVL-KYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN-NKLLFILNQVTGELRVARLL-----PIGQFQLFLRASDNGRPPRHNETSLFI 2358
            I+A+D  S       I  + + +  D+ P+F+ +    V++ EN  +G Y+   RA    A+S  +V   I     G  F +D    P  G+I       LDYE    +   L A             L+I+V+D+NDN P+F       ++ E+    +   ++ V A D DS    K+ Y    +   N    F I   TG I   K L  +    +   +   D   +        + + V DLNDN P    LS          G     +  TD  +E                +  +  TD D G NA +  S  +      D+++DA   +   +S+ R+ D    +  I+  ++  D G P     ++L V+V+ I    P+FE      K+ EN   G ++L V  +D      L + S+  E ++YF I   +G I    + LD E   R  + +   D     K  +  V I V D ND  P F     +   SE +   + V   ++A DKD    N +V F +Q   D  +  I        ++G I T + LD E    + V +RA D G P +    + TI V D NDN P +  P     G + V +  N P    + ++ ATD D G N+ ++++V+    + LF++++ +G L            + Q+ L ++A+D G PP  +  ++ +
Sbjct: 1932 IIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPENSKVGSYITTVRAR---ASSDAQVTYSIISGNKGRAFYVD----PFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTY---SIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDS-GIPPKSTNCQVKVVVTDLNDNPPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDA---DTGVISARRTIDVRIRDSFIQIPVQAMDQGVP---PQRAL-VYVRIIITREPKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENSNYFRIGQRSGVISVN-KPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVV-NVSAADKDSGA-NGRVWFAIQSGDDKGSFAIDR------KTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVP-----GPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIV 2608

HSP 8 Score: 118.627 bits (296), Expect = 8.180e-27
Identity = 105/361 (29.09%), Postives = 166/361 (45.98%), Query Frame = 1 
Query:  451 PKFVKPKQTVNVAENEPIGFYLYLDRALD-ADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIH--VLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENER--EIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD 1509
            PKF  P     V EN  +G  +   R  D A      R+   I  E +  F + Q      G+I V KPLDYE K ++   + A D         + ++  V D ND  P F Q  Y  +  E  PVG  ++ V A DKDS    ++ +      D   + +F I   TG I+ Q+ L  +  + +   V A D+ +   H  V+ + I+V DLNDN P +  + G + +++ E  P    L+ +  TD D G NA +S  ++       F +D        L++  +FDYEN    +    I+  D G+P   ++ ++ V+V D +E+ P F +   K  +  N + G  + QV+A+DRD
Sbjct: 2302 PKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNI--ENSNYFRIGQRS----GVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDD---KGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVS-VTIRVLDLNDN-PPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGW---LTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRD 2648

HSP 9 Score: 111.694 bits (278), Expect = 1.125e-24
Identity = 157/657 (23.90%), Postives = 277/657 (42.16%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGF---YLYLDRALDADATSANRVHQYIFK-EPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN---KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELS------------------DNNIRNTFIIT----------ENTGSIKLQKKLSAKVRQKY-KFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVN-ANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF---TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTF-IDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDRE--INHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTG 2253
            + ++V D+NDN P F        +AE+    F   ++    A D D+ +  +V   I+     G F +D +   +  +   K LD E  + +   +   D+    K  N Q +++ V D NDN P F     ++ I E+   G  + +V A D D +  +++ Y     S                  +  I+ +F IT           +TG I  ++ +  ++R  + +  V A D+  +   +A+  + I +       PK    S   K+  N       + T++VTD+  G+    +S  +     N FR   +G     +S  +  DYE +R     +   D  +P       + ++V D+N+  P F +     +  E    G  ++ VSA+D+D  A  +  F   +G+    F ID  TG I++  R LD E ++   +++  TD    P     +V I VLD NDNPP F +       + ENL   S++   I ATD+D    N ++ F +            + +F + + SG + T    D E    + Y++ I+A D G P LS++    + V D+++ DP +      +   +  ++  N+  G  + ++ ATD D G+   V +   N       +N  TG
Sbjct: 2053 LDINVIDRNDNSPAFHPSNMLAQLAEDTG-AFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDST---TGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQ-VKVVVTDLNDNPPLFDPLS-EVNIREDTRTGAVVTSVVATDTDKE--SRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQ-GVPPQRALVYVRIIIT----REPKFELPSYFGKVPENAM-MGTSVLTVRVTDNAAGLPLGRISYNIENS--NYFR---IGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQ-RALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLY-EINATDRDSGA-NARLSFTVIGG-------TGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSF------NRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNALKMNATTG 2674

HSP 10 Score: 55.4546 bits (132), Expect = 1.761e-7
Identity = 58/224 (25.89%), Postives = 103/224 (45.98%), Query Frame = 1 
Query:  268 DKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPK-QTVNVAENEPIGFYLYLDRALDADATSANRVH-QYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKS--QYFATLEACDTNKQCNTQALEI--HVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIR 918
            DKG   +  +  +  I  Q  +  E ++     ++ A D+ S    + +++ + V D NDN P F  P    V V EN P+   LY   A D D+ +  R+    I     G F +D+    S  L      DYE  +  QY  T++A D      +  + I  +V D+++  PSF++ +Y+ ++  N  +G  +  V A D+DS    ++ + F+  + N ++
Sbjct: 2451 DKGSFAIDRKTGV--IRTQRALDHETIKT-HHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKF---SGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNALK 2668
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0])

HSP 1 Score: 212.616 bits (540), Expect = 9.775e-56
Identity = 207/760 (27.24%), Postives = 341/760 (44.87%), Query Frame = 1 
Query:  154 FKIMEESPIDMVIGNIVH----LHPSFNKASYFIKS-----PFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSS-DQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKK-PLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF---TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKK-LDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            F I E+SP    +G +      + P+    +Y I S      F      G L + S +D ETI +                + A D  S  QS + +IHVSV D NDN P+F K   +  + E+  +   +   +  D D  S   +   +  E +  F +D     S G ++ K PLDYE  + Y  T+ A D     +  T  ++I +++ NDN PSF        I E+  +   ++ + A D D            ++ + N  ++F I +++G I + K+L  +    Y   V A +  +        N  I+V D+NDN+P      G+    ++E  P  + +  +  TD D G NA V+ +L     + F ++     +   ++ R  D E++      +   DHG P   A  ++ + + D+N+ +P+F +    L + EN   G NIL+V ASD D  A  + ++   +G   + F ID  TG+I + +  +DRE +    + I   D+   P      V I V DENDN P F      + I E +S  S+V   + ATD+D+   N +V + +         R     F +     +LTVKK ++RE    YT+ IRA D G PM+++ K  T+ V D NDN P +    +S   I +V    NS     ++ + A D D G N+ + YS+++ N++  F +N  +G +     L      Q+ L + A+D+    + N T   I +N
Sbjct:  796 FNISEDSPTGTRVGQLTATDRDIGPN-GAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPS------------YTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTID-----STGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSDGTPLT------FDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQG-ESVYNNATIRVLDVNDNAPVFNP--GSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGLV---TTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRI-TVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRV-AVVTATDRDEGS-NAQVFYSIV--------RGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVF----NSQSYIGSVR--ENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVINLN 1508

HSP 2 Score: 197.978 bits (502), Expect = 3.624e-51
Identity = 187/674 (27.74%), Postives = 311/674 (46.14%), Query Frame = 1 
Query:  358 LKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG-TFNLDQS--RLPSIGLIVKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKD----SDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND---FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTG-EPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN-NKLLFILNQVTGELRVARLLPIGQ---FQLFLRASDNGRP 2328
            L+ T M   K S QS    I ++++D NDN P+F + K T+ V EN   G  +    A D DA +  RV   I     G  F +D +  R+  +G++     D E  + Y  T+ A D+      +T  + I V D+NDN P F+  E    I E   +G ++  V A D+D    + +F  I+ G          + F I    G + ++K+++ +    Y   + A+D+       +   + + V D+NDN P   S S    +  N       + T+   D D+G NA +   ++    ND   F++++    I + + +   D+E + +   E+   D    +  A  ++ + V ++N+  P F +      + EN     ++++VSASDRD    L YS  G + +D F+ID  +G I +    LDRE+V    I + VTDA   P +    V I++LDENDN P F   S   +I EN S+ S    ++AATD D+   N ++ + L           ++       SG I   + LDRE    Y + I+A D G P  ++     + V D ND+ P  +   S  G +       N P    ++++ A+D D G N+ +T+S+++N +K +F L+  TG++     L   Q   + L +  +D G P
Sbjct: 1171 LRVTAMDHGKPS-QSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVV-----DREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDT--------SAFAINAMNGVLTVKKEINRETVPTYTLTIRASDR-GSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQS-TSVLTVAADDSDVGANAVLRYSIISG--NDEKRFKINSTSGVIMTTTPL---DFEEKSQYGLEVTATDS---KYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTA-DVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILEN-SAPSSFSFKLAATDADEG-TNARITYNLSR---------NDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRP-LINSSSLRGSVR-----ENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNP 1802

HSP 3 Score: 197.593 bits (501), Expect = 4.611e-51
Identity = 199/710 (28.03%), Postives = 317/710 (44.65%), Query Frame = 1 
Query:  298 IDLETICAQHEMCCEEVECILKTTIMAKDKSS-DQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADA----------TSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQ--CNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADK-MAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSA--VLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364
            +D + +         E +   +  + A+D  S  +S    + + + D NDN P F   + T +V E+  IG  +    A D D           TS N  H +     TG             + V + LD+E +S Y   L   D       +T  L I+V D NDN P FS   YQ  + EN P G Q   V A D+DS     +++G  + +D+ +   F I  +TG I + K    + + +Y   V A D+ + + +  A   IFI+  D+ND+SP + S S  SK     T     + T+  TD D G    +  +L+   +   F +DA    I   S +   D E       ++E  D GS    +   + + ++DIN+ +P F+  +   ++ E+   GH I QV+A+D D S+   ++Y+ + +  D F+I+  TG I    + LD E   +  + +   D     ++    V + V D NDNPP F        + ENL++   V   + ATD D    N K+ + +     S N  ++  + + T  GEI T   LDRE   +Y++ I A D  L    A     I + D+NDN P +  P          NI+ +SP G  + +L ATD D G N  VTY++++ N+   F L+  +G L V   L    I  + L ++ASD G P +    S+ + +
Sbjct:  217 VDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGV------------VTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQ---VSATDRDSSTNGALVFGIIKGNDDGV---FTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIE--DVNDHSP-VFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSEL---DRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPY-VFRVSESSSPGHQIGQVAATDADDSSNGDVRYALS-DNTDVFSINTSTGLITLKTQ-LDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAV-CYVTATDADSGA-NGKISYSIL----SGNENMAFAMDRFT--GEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGP-------SRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSV 884

HSP 4 Score: 187.963 bits (476), Expect = 3.723e-48
Identity = 170/645 (26.36%), Postives = 283/645 (43.88%), Query Frame = 1 
Query:  421 VSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISG--VFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVK-KLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLL---PIGQFQLFLRASD 2316
            ++V D NDN P F        V E+  +G  +    A+D D     R+   +    T  F +D     S G+I  K   D E K+ Y   L A D     +     +EI +LD NDN P FS  +Y   + E+  +G  ++ V A DKD+     + Y F   +  N  + F +   TG + + + L  + R  Y   +   D+ +       +++ I V D+NDN P  +  +  S+++ N     +    +  TD D   N  +   +++   ND  +  +      +S  +S DYEN+      ++  D G P       + + ++D+N+ +P F       ++ E+   G  ++ V+A+D D      L+Y   +G     F ID ++G I+     LDRE      + +   D     ++    V I + D NDN P F    G  VF +SE+ S   ++ G++AATD D D  N  V + L    D         +F +  S  ++T+K +LD E    Y V + A D G P  S+     + V+D NDN P +   L      +T  +  N   G  +  + ATD D G N  ++YS+++ N+ + F +++ TGE+     L    I  + L + A D
Sbjct:  156 ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVD-----SQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSF---TSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTD-TSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQ----VSATDRDSSTNGALVFGIIKG--NDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVS-SELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIF---QGPYVFRVSESSSPGHQI-GQVAATDAD-DSSNGDVRYALSDNTD---------VFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSL------YTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADD 764

HSP 5 Score: 165.622 bits (418), Expect = 3.625e-41
Identity = 160/569 (28.12%), Postives = 257/569 (45.17%), Query Frame = 1 
Query:  592 GTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNT--QALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKL-DREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLL 2277
            G F +D S   SI    +K  D E +S+Y  T+ A D   +C+     + I V D+NDN P F    Y   I EN P  Q  I V A D+DS     I Y           N F++   TG I+    L  + +  Y  ++ A D     F        I V D+NDN+P   +LS        +      +  L   D D+G+NA +S  L+    + F +D+ G     + +  +FD E +   +  +   D GSP      ++ + + D+N+  P F        + E+   G  ++ V+ASD+D    A L+YSFT G  N  FT+D  TG +    R LD E      + + VTD    P T    ++I V D NDNPP F   +    + EN  + ++V    +ATD+D    N  ++F +    D       + +F +  S  I+++ K  D E    Y + ++A D G+P+       TI++ED ND+ P + +P +     ++  I  ++  G  ++ + ATD D G    + Y +++ N K  F ++  +G +RV+  L
Sbjct:   10 GMFTIDSS-TGSITTTGRK-FDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAI-VTATDRDSGTNAAITYSLFSG-----ENKFMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHTTFVP-----LITVDDVNDNAP-FFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQG----VIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVS-RSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGTQV----SATDRDS-STNGALVFGIIKGND-------DGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVF-SPSN-----YSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSEL 541

HSP 6 Score: 154.066 bits (388), Expect = 1.202e-37
Identity = 183/688 (26.60%), Postives = 307/688 (44.62%), Query Frame = 1 
Query:  340 EEVECILKTTIMAKDKSSDQSESINIHV-SVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADA-TSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIN-DFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS---AVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPK--TGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
             E E   + T++A+D ++   +   + V  V D+NDN P+F       N+ EN P    + +  A D D+ T+A   +     E     N     + ++      PLD+E K  Y   + A D   +  T    I V D NDN P F+   Y+  + E+  VG  +  + A+D D  +  ++ Y    +S +    ++   ++ G I+ +     + +  Y+  + A D  + +     A + I++ D+NDN P  +S    + ++  +      + T+  +D D G NA++         N  F LDAV   + ++S  RS D+E        +   D GSP       L ++V DIN+  P F     + ++ EN   G    QVSA+DRD S   A++     G  +  FTID  TG I S  +  D E   R ++ +   D     K  T Q T+ IE  D ND+ P F   +    I E+    S V   + ATD D          +L++   S N + +   F +   SG I    +LDRE   +Y++++ A D G    S+    TI ++D NDN P +  P       +   ++ +S PG+ I ++ ATD D   N +V Y+ +++N  +F +N  TG + +   L      Q+ + + A D G P R + T + + ++
Sbjct:   30 RESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAA-QVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTV-----TPLDHETKDSYTMRISAFD--GKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSL--VSGD---TSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPS-RSGQATVEIEILDVNDNRPVFSSAQYTASVD-EDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAV-TGVVTVS--RSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAG---TQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTG-IISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIE--DVNDHSPVFSPSNYSKQIPESTVIGSTVV-TVTATDLDSGPRG-----RLEYRLISGNVKGA---FNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGP-------YVFRVSESSSPGHQIGQVAATDADDSSNGDVRYA-LSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVD 676

HSP 7 Score: 130.954 bits (328), Expect = 1.486e-30
Identity = 153/594 (25.76%), Postives = 259/594 (43.60%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVL--DQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND-FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQL---QHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPD 2175
            + ++V+D+NDN P F   + +  + E   IG  + +  A D D  S  +V   I +  T  F ++   +  + L VKK ++ E    Y  T+ A D      T   E+ V+  D NDN P F+ Q Y   + EN      ++ V A   DSD+    +  +  +S N+ +  F I   +G I     L  + + +Y  +V A D      + A  N+ I+V +LND +P  T  +  + +  N    P     ++V+  D     ++S  ++    +D F +D     I   S+    D E       ++   D G+P       + + + D N+ +P+F+       +LEN        +++A+D D     + ++    ND F I   +G I    + LDRE     ++ I   D    P+    T+ + V+D ND+ P     S   ++ EN    + V  RI A+D D   +N ++ F L   +H          + +F +   +G+I T   LDRE    YT+ I   D G P LS+  +  I V D++DN P +  P       + V I+ + P G  I+++ A D D
Sbjct: 1294 VAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINA--MNGV-LTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAA--DDSDVGANAVLRYSIISGNDEKR-FKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSK----YTAKTNVTIRVINLNDITPAFTQQNYTASVRENS---PTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGII---STADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITLA-QPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVM-RILASDADTG-LNAELTFSLLSNEH----------KSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRF-QPTE-----YNVTISESLPRGASIVQVTARDID 1852

HSP 8 Score: 111.309 bits (277), Expect = 1.484e-24
Identity = 88/280 (31.43%), Postives = 130/280 (46.43%), Query Frame = 1 
Query: 1540 GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFT--IYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364
            G     FTID  TG I +  R+ DRE   R  + ++  DA      G+  V+I+V DENDN P F   S VFNI EN  +       + ATD+D    N  + + L   F  +N+         +++GEI TV  LD E   +YT+ I AFD        H  F   I V+D NDN P +   +   G    V +      G ++ +L A D D G N+ ++YS+++ +   F ++   G +R            +Q+ LRA D G P R  + ++ I I
Sbjct:    6 GNDQGMFTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQV--AIVTATDRDSG-TNAAITYSL---FSGENK-----FMMNSKTGEIRTVTPLDHETKDSYTMRISAFD------GKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAV------GSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDS-QGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEI 261

HSP 9 Score: 60.077 bits (144), Expect = 5.586e-9
Identity = 51/167 (30.54%), Postives = 76/167 (45.51%), Query Frame = 1 
Query:  370 IMAKDKSSD-QSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDAD-ATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALE--IHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKD 858
            I A+D  +  Q+ SI I V+V D ND+ P         +V EN+P   ++    A DAD   +A      +  E    F LD +   +  +  K PLD E ++ Y   +   D      +   +  I V+D++DN P F   EY + I E+ P G  I+ V A D D
Sbjct: 1689 IQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNT---TGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDID 1852
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9])

HSP 1 Score: 208.764 bits (530), Expect = 1.409e-54
Identity = 215/753 (28.55%), Postives = 350/753 (46.48%), Query Frame = 1 
Query:  151 TFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSP--FLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK-EPTGTFNLDQSRLPS---IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYG--FHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSP--KITSL---SGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND---FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPND--YFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVM-NNNKLLFILNQVTGELRVARLLPIGQ-----FQLFLRASDNG 2322
            TF + EE P    +G +       + AS F  SP  F   S+ G +  ++RID ET          ++   L+T        +  ++ I++ V V D NDN P+F     T+ + E+  +     ++ A D DA +   V   I   + T TF+L  +  P+   + +I KKPLD E    Y   + A D  T        + I +LD+ND+ P F+Q  Y   I EN   G  I+ V A D+DS     I Y   +  +  N+I   F +  +TG I+ ++ L  +V+  Y F V A+D   +     +A + I V D NDNSP  KIT L   +G+  I    +     +  + VTD D   N+    ++     +D   F+++ +G   Y +   +  D E        +   D G P       + + V D+N+ +P F  +     + E  + G  +LQ++A+D D   +  + YS TG  ND  +F +D  +G + +  + LDRE V  + I I   D    PKTG  TV + ++D NDN P F+  S    ISE  S  + V  +++ATD D  + N ++ +++  + D+Q       +F++ T++G + T  +LDRE    Y+  + A D G P L +     + + D NDN P +  P+      +  +I  N PPG L +++ ATD D G N+ ++Y ++  NN   F ++  TG   ++ L  +       F L + A D G
Sbjct:   13 TFHVQEEQPPGTYVGKV-------DGASAFEGSPKQFGFNSNTGVISTTARIDRET--------TTQISLQLRTL-------NPSNQPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSI---FDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDG-GVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNG--DDEGCFKVEFLG--FYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGG-NDLGWFQVDFQSGLVTTA-KPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVL-QVSATDVDSGD-NGRITYEISSS-DAQ----VNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFY-PVE-----YFASIMENEPPGKL-LQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTG--VISTLASLDHEVEEFFSLIISAKDGG 717

HSP 2 Score: 182.956 bits (463), Expect = 1.518e-46
Identity = 184/666 (27.63%), Postives = 291/666 (43.69%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK-EPTGTFNLD-QSRLPSIGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIN-DFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTF------IDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK--LLFILNQVTGELRVARLLPI-GQFQLFLRASDNGRPPRHNETSLFIFI 2364
            + + V+D NDN P F     T N++E    G Y+    A D D      V   I      G F +D QS L    +   KPLD E  S    T+ A D  +  +  +  + + ++D NDN P F +  Y+  I E   +G  ++ V A D DS    +I Y     SD  +   F +   TG +  + +L  + +  Y F V A D        +V  + + + D+NDN+P    +   + I  NE  PP +L  +  TD D G NA +S  ++    N +F +D+    I   S++ S D+E E      I   D G+        +NV V +  +  P F  +     + EN  +G  + +V A+ +D +  + Y+  +G+P + F +D   G IK     +DRE   +  + +I       P + Q TV IEVLD NDN P F      +DI G + + +       V    AA D D  + N  V +QL           +E +  + + SG I   +KL       YTV++ A D+G P    H   TI++    ++ P +   LSS    +  ++ A+ P  Y    + A D D G+N  + YS+   N+  L  I       +R + L  + G + L +RA+D G P       + I+I
Sbjct:  411 VLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGL----VTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISS-SDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSV-KVELTISDINDNAPVFYPVEYFASIMENE--PPGKLLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVI---STLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNGSISYAIVSGDPTNLFLVDSTGGIIKIN-GDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQ-------VVYNAAAVDLDAGK-NGLVRYQLTSN--------AEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSP--PQHSTMTIHITLSINHPPKFT--LSS----YVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIFPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYI 1040

HSP 3 Score: 158.688 bits (400), Expect = 3.993e-39
Identity = 191/686 (27.84%), Postives = 299/686 (43.59%), Query Frame = 1 
Query:  343 EVECILKTTIMAKDKSSD-QSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVK--KPLDYEVKSQYF-ATLEACDTNKQCNTQA-LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAV--GNEIYSLSSIRSFDYENEREIKAE----IECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNI--LQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDRE-MVERIEINIIV--TDAIENPKT---GQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLLPIGQFQLF---LRASDNGRPP 2331
            EVE      I AKD  +   +++  ++V+V +K DN P F+       V EN P G  +    A   D  + +  +  +  +PT  F +D     S G I+K    +D E K+QY  A +    T K  + QA + I VLD+NDN P FS     ++I   + VGQ +    A+D D+     + Y       +N      I   +G IKL +KL+     +Y  +V A+D  +   H  +  I I    L+ N P   +LS      +       + F +   D D G N  +   + Q   N+  L  +  G ++Y   S+        + +K      +   D G P   A   + ++++D N+    F  +  +  + EN   G  +  L   A D   +  + YS     + +F +D  +GQI + +R LDRE +++    N+ +   +A+ N  T    +  VI+ V D NDN P F        +SE LS       RI A D D+ + N K  + L            +  F  + +GE+   K LDRE   +Y + ++A D     L +     I V D ND  P  V P S +    TVNIT ++  G L+I L A+D D G+N  + YS+ N N   +F +   TG L VA+ L     QL+   + A D+G  P
Sbjct:  702 EVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDK-NGSISYAIVSGDPTNLFLVD-----STGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLT----SNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMT-IHIT---LSINHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQG--NEEGLFGIFPGGKLYIRKSLL-------QALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSES-HFAVDVRSGQITTRVR-LDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSE-LSLPGSPVFRIKAMDADEGD-NAKFFYSLVSGTGM------DKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRP--VFPESDY----TVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIP 1348

HSP 4 Score: 156.762 bits (395), Expect = 1.702e-38
Identity = 165/686 (24.05%), Postives = 304/686 (44.31%), Query Frame = 1 
Query:  370 IMAKDKSSD-QSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQAL--EIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLS-AKVRQKYKFKVFAADKMAM----AFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETD-PPRELFTLQVTDDDIGVNANVSCQLLQQY-INDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREI----NHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQ--FQLFLRASDNGRPPRHNETSLFIFING 2370
            ++A D  S  Q  ++ IH+++S   ++ PKF       +V  ++P+ +  +   A+D D+    +  Q  +  P G         P   L ++K L   +K  Y   + A D      + ++   I++ D ND+   F    ++  + EN   G  +  + A   D      I+Y       +     F +   +G I  + +L   ++ +     V+     AM       +  A + + V DLNDN+P  +       I ++E   P   +F ++  D D G NA     L+    ++ F +++   E++ LS  ++ D E        ++  D  +    +   + + V D N+  P F +    + + E+   G  ++ ++ASD+D   + ++KYS + G     F ++  TG++    + LD E  +  E+ I   D    P +    V + VLD NDN P F        + EN+++   V GR  A+D+D    N  + F +     S+   ++      + + EI T+  +D E       ++ + + A D G P LS  K+ T+ V D+NDN P +V+P ++  G  ++N          ++ + A DPD   N  VTYS+++ N   F L+  TG+L++   +P     +QL ++ASD G+P R  +T + +F  G
Sbjct:  918 VLASDSGSPPQHSTMTIHITLSI--NHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDS---GKNGQLFYSIPQGNEEGLFGIFPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSESH-----FAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAV--YAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELH-LS--KTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVA-KSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPV-GRCTASDRDTGT-NAHIAFSMYSQTPSKTFSVN------SATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAG-SSLN----------VMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQIPDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEG 1568

HSP 5 Score: 144.436 bits (363), Expect = 1.109e-34
Identity = 157/589 (26.66%), Postives = 258/589 (43.80%), Query Frame = 1 
Query:  640 VKKPLDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINE-TDPPRELFTLQVTDDDIGVNANVSCQLLQ---QYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD--GSAVLKYSFTGEPNDY-FTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKK-LDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIG---QFQLFLRASDNGRPPRHNETSLFIFIN 2367
            ++KPLD E+   Y  TL   D     +     + I V D NDN P+F+   Y   I E    G  ++ + A D D      + Y    ++  N    F +   +G +   K L  +        + A D    A       + + + D NDN P+   +  + K  I+E       +  +  TD D G N  ++ ++     Q    F L+     +++ S +   D E +      +   DHG P+ ++   + + + DIN+ AP F        ++EN   G  +LQV+A+D D   +AV+ Y   G  N+  F+ID  TG I S +  LD E+ E   + I   D           V + VL++ DN P F+     F + EN+   + V GR+ AT KDK   N  + + +  + D  N      +F V  +G I+ +   +DRE    Y + + A    +  LSA     I V D+NDN P + T          V+I      G ++    A D D G+N  V Y + +N + L  +N  +G +++AR L  G   Q+ + + ASD+G PP+H+  ++ I ++
Sbjct:  379 LQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSY---SITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDH-GSAPKTGSTTVTVTIIDGNDNKPRF--MKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQL---DRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGK-LLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVI-STLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLV-GRVYATTKDK---NGSISYAIV-SGDPTN------LFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSV------IVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLS 939

HSP 6 Score: 119.398 bits (298), Expect = 4.434e-27
Identity = 129/458 (28.17%), Postives = 205/458 (44.76%), Query Frame = 1 
Query: 1063 IKVKDLNDNSPKITSLSGNSKI----EINETDPPRELFTLQVTDDDIGVNANVSCQLLQ-QYINDFRLDAVGNEIYSLSSI---RSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSA--VLKYSFTGEP---NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPP----TFIDI-SGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESG--EILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFIFI 2364
            ++V D+NDN P+  +L    +I    ++N T+P         TD D G N  V   +        F L        S   +   +  D E     +  I   D G+P  + +  +N+ + D N+ AP F ++     + EN + G +IL+VSA+DRD  +   +KY+   +    N  F +D  TG I++  + LD E+      N+I +D     K    TV I VLD NDN P    T++   +G   I    S  +     I  TDKD +  N++   ++ +  D       E  FKV   G   I   K LDRE+   Y + +   D G+P  S      I V D NDN P + +        +T NI+  +  G  +++L ATDPD G+N  V+YS+   N L  F ++  +G +  A+ L    +    + + A D+G  P+   T++ + I
Sbjct:   83 VQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPIN-----TATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTK-QNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNT-NSQTELKITNGDD-------EGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTS------NAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTI 520

HSP 7 Score: 86.2705 bits (212), Expect = 5.492e-17
Identity = 107/388 (27.58%), Postives = 172/388 (44.33%), Query Frame = 1 
Query: 1279 LSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPH---TGQIKSGIRR--LDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDW-VTPLSSHGG---IHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK--------LLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEV 2379
            +S+    D E   +I  ++   +   P N    S+ V V DIN+  PRF   +  L++ E+ +        +A+D D      + Y+  +G+    F++      TG     I +  LDRE  +  ++NI  TD       G C + I +LDEND+ P F   S + +I+EN      +  R++A D+D    N  + + +   +D+     S  IF + + +G I T + LD E+ ++YT  + A D G+P  +     TI V D NDN P   +T L  H G   I + N   N+   Y+++    TD D   NS     + N +         L F   Q+   L    L+P   + L L  +D G P R   T  F+ I+  +V
Sbjct:   51 ISTTARIDRETTTQISLQLRTLN---PSN-QPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSIL-RVSAADRDSGS-NGDIKYAID--WDAIQ---SNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILV----TDKDSNTNSQTELKITNGDDEGCFKVEFLGFYFIQLQKPLD-RELVPF--YNLTLNVTDKGVPSR--STLGFVLIDVTDV 418

HSP 8 Score: 69.3218 bits (168), Expect = 9.644e-12
Identity = 71/270 (26.30%), Postives = 115/270 (42.59%), Query Frame = 1 
Query:  292 SRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQ-SESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQS--RLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQN--DNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAK-VRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLN 1083
            + IDLET+ A  +          +  +MA D+ S + S   +I V V+D+NDN P FV P      A        +    A D D  S  +V   I     G FNL  S  +L  I  I   P  Y++      T++A D  +        + V  +      P+FS  +YQ  + EN   G  ++ V A    S L   I Y    L+ ++ +  F + ++TG +K  + +  + +   +   V+A DK   +   + A + I V+D+N
Sbjct: 1430 AAIDLETMPAGRDS--------FQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPP-----AAAAGSSLNVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQIPDNPTIYQL------TIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEY---YLTSDSSKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO33359 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSF2])

HSP 1 Score: 185.267 bits (469), Expect = 3.457e-48
Identity = 181/689 (26.27%), Postives = 310/689 (44.99%), Query Frame = 1 
Query:  343 EVECILKTTIMAKDKSSDQSESI-NIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATS-ANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTN----KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAM----AFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIY------SLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRD---GSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDK-DKDE-INNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331
            E + +   ++ A+D+ S    +I  IHV ++D NDN P F   +    V+EN P+G  +   +A+D D+TS A+ ++        G+F +D S   +  ++ +K  D+E   +Y  T+   DT        N   + I V+D+NDN P F+Q+ Y   + ENF VG  ++ V A DKDS     + Y  H     N  + F+I  ++G I L K L  +  + Y   +   D M +    +  + V N+   V  +N+++P+  +   N+ I   E  P    +  ++  +DD+ V A        ++I   + DA  ++++       ++  R  DYE  R                                  R+E      ++ EN   G  +L + A DRD      V  Y  T      FT +  TG + S    LDRE V +  + ++  D    P+T    V +EVLD NDNPP F  +     +SE  S  +++  R++A D+ DKDE +N ++ + L+    S+   I++       +G+I   + +D E   +Y+ E+ A D G   L+   +  I + D NDN P +  P   +     V +  N   G  + ++ A+D D   N  V +S++  N    F+++Q TG +   + L    + ++ L ++A+D G PP
Sbjct:   70 ETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAVDKDSTSNADLIYSIQNGNNNGSFTIDNS---TGEIMTRKEFDFEKTERYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPPEFAQKRYTATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHS---GNTDDAFVIIADSGDISLDKPLDKETIENYTLVLIVTD-MGIPPLESIKRMVVNVI--VSGVNEHAPRFLNEFYNASIP--ENLPLGTSIVRVRAVEDDVSVGA--------RFIYVIK-DAASSKVFLVNQTGDITLARELDYETRR----------------------------------RYE-----FEMYENVTSGTQVLTLFAHDRDEGINGQVFYYIVTSSVKGVFTTNSTTG-VVSLTAELDRESVYQYNMLVVAQDGGSPPRTASAHVKVEVLDCNDNPPVFTTLYYTLQLSEATSIGTRIL-RVSANDRDDKDEGVNAEIRYFLKDAIVSKKFSIND------TTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRP-YFLPTRYY-----VQLVENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDPP 685

HSP 2 Score: 125.946 bits (315), Expect = 2.165e-29
Identity = 159/628 (25.32%), Postives = 276/628 (43.95%), Query Frame = 1 
Query:  253 FLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGT--FNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVT-----DDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSI-------RSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFT---GEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENP-KTGQCTVI-IEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQ-LQHTFDSQNRRISEPIFKVTE-SGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVE--DQNDNDP 2067
            F+ ++D GD+ L   +D ETI        E    +L  T M      +  + + ++V VS  N++ P+F+      ++ EN P+G  +   RA++ D +   R   Y+ K+   +  F ++Q+      + + + LDYE                                     +++ Y+ E+ EN   G Q++ + A D+D  +  ++   F+ +  ++++  F     TG + L  +L  +   +Y   V A D  +     A A++ ++V D NDN P  T+L    ++    +   R    L+V+     D D GVNA +           F  DA+ ++ +S++         ++ DYE       E+   D G  R     S+ + + D+N+  P F      ++L+EN   G  + QV+ASD D S   K  F+   G  +  F ID +TG + +  + LD E V    + I  TD  + P  + Q  ++ + V++ NDN P F       +I EN ++   V  R+ A+D D   +N KVLF  L+   D +        F V + +G + T K LD E    YT+ I+A D G P L++ +   ++V   + NDN P
Sbjct:  264 FVIIADSGDISLDKPLDKETI--------ENYTLVLIVTDMGI-PPLESIKRMVVNVIVSGVNEHAPRFLNEFYNASIPENLPLGTSIVRVRAVEDDVSVGAR-FIYVIKDAASSKVFLVNQTG----DITLARELDYE-------------------------------------TRRRYEFEMYENVTSGTQVLTLFAHDRDEGINGQV---FYYIVTSSVKGVFTTNSTTGVVSLTAELDRESVYQYNMLVVAQDGGSPP-RTASAHVKVEVLDCNDNPPVFTTLYYTLQLSEATSIGTR---ILRVSANDRDDKDEGVNAEIRY---------FLKDAIVSKKFSINDTTGQITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQLVENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTN-KSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKMYSASIDEN-TTVGHVILRVTASDLDS-SLNGKVLFSILEGNSDGK--------FVVDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSP 813

HSP 3 Score: 112.079 bits (279), Expect = 4.211e-25
Identity = 109/382 (28.53%), Postives = 180/382 (47.12%), Query Frame = 1 
Query: 1159 LFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQ---CTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFT--IYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRVARLL 2277
            L T+   D D  +NA V+  ++  +  +     + N    + S + FDYE +R     +   D GSP   A  +++V + D N+  P F+    + ++ EN   G  + +V A D+D +  A L YS   G  N  FTID  TG+I +  +  D E  ER  + I V+D    P         V+I V+DENDNPP F        + EN +  + V  R+ A DKD     N +L   +++  S N    +    + +SG+I   K LD+E   NYT+ +   D G+P L + K     + V   N++ P ++         +  +I  N P G  I++++A + D    +   Y + +  +  +F++NQ TG++ +AR L
Sbjct:   22 LLTVLARDQDAALNARVTYSIVS-FSTESDYFVIDNITGVVRSSKEFDYETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAVDKDSTSNADLIYSIQNGNNNGSFTIDNSTGEIMTR-KEFDFEKTERYNLTISVSDT-GVPALSSLNFANVVIIVVDENDNPPEFAQKRYTATVYENFTVGTVVL-RVTAHDKDSGP--NAML---KYSIHSGNT--DDAFVIIADSGDISLDKPLDKETIENYTLVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAPRFLNEF------YNASIPENLPLGTSIVRVRAVEDDVSVGARFIYVIKDAASSKVFLVNQ-TGDITLAREL 385

HSP 4 Score: 95.1301 bits (235), Expect = 7.440e-20
Identity = 87/316 (27.53%), Postives = 149/316 (47.15%), Query Frame = 1 
Query: 1417 PRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYS---FTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSA--HKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPP 2331
            P F +      + E+   G  +L V A D+D +  A + YS   F+ E +DYF ID  TG ++S  +  D E       ++   D     ++   T+ +++ D NDN P F  +     +SEN +    +  R+ A DKD    N  +++ +Q+  ++ +  I         +GEI+T K+ D E    Y + I   DTG+P LS+    N  I V D+NDN P++          +T  +  N   G +++++ A D D G N+ + YS+ + N    F++   +G++ + + L    I  + L L  +D G PP
Sbjct:    1 PIFNQTLYSAIIPEDFTVGGTLLTVLARDQDAALNARVTYSIVSFSTE-SDYFVIDNITGVVRSS-KEFDYETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSEN-TPLGTIVARVKAVDKDSTS-NADLIYSIQNGNNNGSFTIDN------STGEIMTRKEFDFEKTERYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPPEFAQKR------YTATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHSGNTDDAFVIIADSGDISLDKPLDKETIENYTLVLIVTDMGIPP 300
[Close]
BLAST of Protocadherin vs. Ensembl Nematostella
Match: EDO39230 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAP5])

HSP 1 Score: 182.57 bits (462), Expect = 2.459e-46
Identity = 191/638 (29.94%), Postives = 290/638 (45.45%), Query Frame = 1 
Query:  370 IMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK-EPTGTFNLDQSRLPSIG-LIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDS-------DLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLS-AKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDD--IGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENE-REIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFT---GEPNDYFTIDPHTGQI-KSGIRRLDREMVERIEINIIVTDAIENPKTGQCT--VIIEVLDENDNPPTFIDISGVFNIS--ENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPD-YGENSNVTYSVMNN 2217
            + AKD  +   ES  ++++V D+ND  P F      ++V E+ PIG  +    A DAD     ++  +I K +P G F++  S  P  G L+V   LD+E KS Y   + A D  K  +T  + + + D ND  P FS   Y+  I EN   G  ++ V A D DS       D   K  +    +  +   N ++    TGS +L ++ S  KV     F V A D      H A A I + + D+NDN+P+  +      +E N+      ++   V DDD   G NA +S +L     + F +D +   I    +  +FD E    + K  ++  D G+PR  A     +HV D N+  P+F + F +  + EN   G+++L+V+A+D D     ++ F    G     F IDP  G +  SGI  LD E  +   I + V D    P  G  T  V+IE+LD NDN P F  I  ++N S  E++ +   V   + A DKD    N    F +    D  +    EP       G I T   LD+E   ++ +++ A D G   L       I V D NDN P W  P    G I    ++A       + KL+A DPD + ++  +T+S+ N 
Sbjct: 2645 VTAKDGVN--KESAILYITVVDQNDQPPVFAPKSYAISVPEDSPIGTSVLDIYATDADVGENAKITYFISKGDPEGKFSIVTS--PVKGELVVNGKLDFETKSSYTLEVTATD-GKFSDTAVVTVTIQDVNDLPPVFSSPLYESRIQENTGPGAGVVMVTASDIDSPTISFSLDDRGKDYFQITPIRASGPGNVWVGDIRTGSKQLDREESPVKV-----FTVIANDGK----HTAQAEIRVNLTDVNDNAPRFPASPYIGYVEENKPSGTSVMYIQAVDDDDPLAGGNAKLSYELTDSAGDKFSIDPLSGLI---KTKVTFDREQTPNKFKVRVKATDAGNPRLSASVDGIIHVSDANDHKPKFTEKFYRGSVAENAPPGYSVLRVTATDEDVGPNAEFEFVVVQGNDPHAFYIDPFNGTVLVSGI--LDYEKKKEYTITLTVADRGMPPLQGDETAYVVIEILDANDNAPEF--IPKIYNASVLEDVGARQPVL-TVTAVDKDSGP-NGNFTFAIDPRSDPDDAFTIEPNPNNASIGIIRTRVPLDQEKTPSFHLKVTATDAG--GLQGEGEVRINVIDVNDNGP-WFVPPFFVGQIKE-GVSARQ----FVTKLKAYDPDAFVKDQVITFSIYNG 3251

HSP 2 Score: 162.155 bits (409), Expect = 4.884e-40
Identity = 186/714 (26.05%), Postives = 311/714 (43.56%), Query Frame = 1 
Query:  292 SRIDLETICAQH-EMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVK--KPLDYEVKSQYFATLEACDTNKQC-NTQALEIHVLDQNDNYPSF--SQQEYQIEILENFPVGQQIIAVEAIDKD-SDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYS-LSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDP---------HTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHN-YTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVM-NNNKLLFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFI 2364
            +R+ LET      E+  ++VE I  T      K +  +  I I VS    N+  PKF +   T ++ EN   G  +   R     +T A   ++ +   P         R+   G I+   +P DYE  + Y     A D      +T  + I+++D ND  P+F  +       +LEN P   ++I+++AID D S+   ++ Y   E+ DN     F I  +TG I  +  L  +V  KY  +V A D +    +K  A ++I V D ND  P     S    I + E  P    +  +  TD D+G NA ++   + +   + +   V + +   L      D+E +     E+   D G   + A   + V ++D+N+  P F     + ++ EN   G  ++ V+ASD D S  + +S      DYF I P           G I++G ++LDRE      + +    A +   T Q  + + + D NDN P F     +  + EN  S + V   I A D D            + T  + ++   +P+     SG I T    DRE   N + V ++A D G P LSA  +  I+V D ND+ P +          +  ++  N+PPGY ++++ ATD D G N+   + V+  N+   F ++   G + V+ +L      ++ + L  +D G PP   + + ++ I
Sbjct: 2419 ARLQLETGKKLLLEVSAKDVESIAGT---QPGKPTKYTTQIEILVS----NEEPPKFSQQVYTASINENMETGSTV--TRITATSSTGAEISYENVDTNPRAKILF---RVQPDGYIITGDRP-DYERGTTYNMQFAAKDKKTLLYSTVKVVINIIDVNDVSPAFLLAINTRNARVLENKPAPTKVISMKAIDDDGSEPHRRVTY---EMKDNP---NFQIDASTGMITTKTTLDREVTPKYDVEVTAKDGV----NKESAILYITVVDQNDQPPVFAPKS--YAISVPEDSPIGTSVLDIYATDADVGENAKIT-YFISKGDPEGKFSIVTSPVKGELVVNGKLDFETKSSYTLEVTATD-GKFSDTA--VVTVTIQDVNDLPPVFSSPLYESRIQENTGPGAGVVMVTASDID-SPTISFSLDDRGKDYFQITPIRASGPGNVWVGDIRTGSKQLDRE---ESPVKVFTVIANDGKHTAQAEIRVNLTDVNDNAPRFPASPYIGYVEENKPSGTSVM-YIQAVDDDDPLAGGNAKLSYELTDSAGDKFSIDPL-----SGLIKTKVTFDREQTPNKFKVRVKATDAGNPRLSASVDGIIHVSDANDHKPKFTEKF------YRGSVAENAPPGYSVLRVTATDEDVGPNAEFEFVVVQGNDPHAFYIDPFNGTVLVSGILDYEKKKEYTITLTVADRGMPPLQGDETAYVVI 3087

HSP 3 Score: 133.65 bits (335), Expect = 2.474e-31
Identity = 176/727 (24.21%), Postives = 304/727 (41.82%), Query Frame = 1 
Query:  154 FKIMEESPIDMVIGNIVHLHPSFNKASYFIKS-----PFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIF-------KEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQAL---EIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFT-LQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLS-------SIRSFDYENEREIKAEIECYDHGSPRNVAHK-----SLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEPNDYFTIDPHTGQIKSGI--RRLDREMVERIEINIIVTD-----AIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGE-NSNVTYSVMNN 2217
            F + E++    ++G I+    S  +  Y I S      F+ + D G ++L+S +D E    Q+ +  +  E I                ++++ + V + ND++P F +   +V + E+  +G  +    A D D  S+               KE  G F +D    P+ G I V   LDYE +  +   + A D  K+ + Q L    + + + NDN P+F +  Y+  + E    G+ +  V A+D D D    + Y     S       F + ++TG I L   L    + +Y  +V A D   +    +  ++   V D N+N P+ T+      + I E DP     T L  TD D G N  ++  +          DA    ++S+        S+ S D EN+    A I+  D  S ++ + +      L ++V+D+N+  P F        +  +   G NIL V A+D D    A +KY+        F +D  +G +++     RL  E  +++ + +   D       +  K  + T  IE+L  N+ PP F       +I+EN+ + S V  RI AT     EI+           D+  R  ++ +F+V   G I+T  + D E    Y ++  A D    + S  K   I + D ND  P ++  +++        +  N P    +I ++A D D  E +  VTY + +N
Sbjct: 1945 FMVSEDAKYLSLVGIILARSISGARLDYKIVSGNVGDKFIAMGD-GRILLNSLLDFERDQTQYNLKVKATEQI----------PDGLDSTVDVKIDVINANDHFPYFDQQLYSVQIPESTAVGVLVQEVTAKDCDCLSSCTCSPGFLTYSIEPSKEQGGKFYID----PATGKISVSVALDYEDQRYHLLKVYATDKGKK-SFQGLCFVNVTLTNVNDNRPTFLKSAYEFRVAEGAATGESLAIVVAVDADGD---AVTY-----SKAGGALQFSVDQSTGVITLNSALDPN-KNQYTLQVMAKDSGGLT---STVSVTFNVADANNNVPQFTNC---GTVSIRENDPRDTKITQLTATDADRGQNGQITYSI---------EDASSQTLFSIEPRTGVVRSLTSLDRENKDSYNAIIKAEDGSSKQDESERLLWYCYLTINVEDVNDNRPYFLAAKYFGSVFSSAPNGSNILTVQATDADSGSNAKIKYALLDSAGGLFRLD-SSGILRTNTNPARLQLETGKKLLLEVSAKDVESIAGTQPGKPTKYTTQIEILVSNEEPPKFSQQVYTASINENMETGSTVT-RITATSSTGAEIS-------YENVDTNPR--AKILFRVQPDGYIITGDRPDYERGTTYNMQFAAKDKKTLLYSTVK-VVINIIDVNDVSPAFLLAINT----RNARVLENKPAPTKVISMKAIDDDGSEPHRRVTYEMKDN 2615

HSP 4 Score: 132.109 bits (331), Expect = 7.953e-31
Identity = 184/740 (24.86%), Postives = 308/740 (41.62%), Query Frame = 1 
Query:  268 DKGDLMLSSRIDLET-----ICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSR----LP-----SIGLI-VKKPLDYEVKSQYF----ATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND----FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAH-KSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIRRLDREM----VERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTES-GEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPP----GYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQ---VTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSL-FIFIN 2367
            D G + L  ++D ET     I  + +     +E  L + ++AK             V++ D NDN P+F   + +  V  +        L RALDAD+ S   V          T+ +D  R    LP       G+I   + + Y   S Y     AT  A D +++     + + VLD     PSF Q+ Y   + E   VG  +  V A+    + F K     +     N  NTF +    G I + K L  +    Y   +    ++ +  H     +++ + D+ND++P  TS      I+    +    L  +   D D G N  +   +L     D    F +D+   +I   ++  + DYE  +     I   D+GSP+ ++    +++ V D N+ +P F   F + K+     +G ++LQV A+D D      + YS   G   + FTI+      + G+  +D+ +     ++  + +   D   +P++G  TV I V    D PP F+       + E + +  +V G  AAT +            L +T  S N      +F++  S G +   ++LD E    Y ++I A DT     SA     I V + NDN P +V  +   G I    I   SP     G +I +L A D D  E   +T+ V ++ K LF ++    VT +  +  L  I  F +  +A DNG PP+  +  +  +F++
Sbjct: 1058 DTGQVYLIKKLDFETKSYFPIAVRAKYSGGAIE--LASEVVAK-------------VTIVDVNDNGPRFAFHESSKTVVIDSFSAKDTQLARALDADSGSLGEV----------TYGIDGGRSTSNLPFNINVKTGMIFATREILYTQGSSYIIIVVATDGATDGSQKIQKFTVNVQVLD-TPRPPSFPQKTYSAPVTETAGVGDTVTTVRAVYSKPNAFLK-----YTFVSGNEDNTFCV-NGFGIISVAKSLDREKVAGYTLGM----RVTLGQHVDDTTVYVNLTDINDDAPHFTSAIYRRSIKEGLAEDTEILPPVIAVDHDFGSNGKILYSILSGVHPDWDKYFNIDSATGKI---TTKMTLDYETHKSHTLFIRAEDNGSPKRLSGIAQVDIDVIDRNDNSPVFAAAFYRAKISLGAVKGTSVLQVHATDLDSGQNGQITYSIIQGNEEEAFTIN------EQGVILVDKSLTTVAADKFSLKVEARDKNASPRSGSVTVEINVY-LPDGPPMFVVSPVTVYVKEGVPANHRVAGVKAATSE-----------ALTYTLLSGNE---AGMFRINPSTGSLDATRELDYEERRRYELKIEARDTR--DRSAMVELIIIVVNINDNKPTFVDIVD--GQIDRKAIGTCSPTDIAEGEVITRLGAFDRDGDE---ITFIVPDDVKDLFKIDSRGVVTAKKPIEDLPKIYPFNV--KALDNGEPPQETDVKVRLVFVH 1728

HSP 5 Score: 105.916 bits (263), Expect = 8.537e-23
Identity = 167/681 (24.52%), Postives = 278/681 (40.82%), Query Frame = 1 
Query:  370 IMAKDKSSDQSES------INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRL-------PSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFII-TENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDP-PRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF---TGEPNDYFTI--DPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILT-VKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQAT---DPDYGENSNVTYSVMNNNKLLFILNQVTGELRVA----RLLPIGQFQLFLRASDNGRP 2328
            I A+D SS Q ES        + ++V D NDN P F+  K   +V  + P G  +   +A DAD+ S  ++   +     G F LD S +         + L   K L  EV ++   ++      K       +I +L  N+  P FSQQ Y   I EN   G  +  + A    S    +I Y   E  D N R   +   +  G I    +   +    Y  +  A DK  + +  +   + I + D+ND SP            + E  P P ++ +++  DDD G   +       +   +F++DA    I + +++   D E   +   E+   D     N     L + V D N+  P F      + + E+   G ++L + A+D D     K ++    G+P   F+I   P  G++     +LD E      + +  TD  +   T   TV I+  D ND PP F        I EN    + V   + A+D D   I+  +  + +  F     R S P       G+I T  K+LDRE +      + A D      +A     + + D NDN P +  P S + G     +  N P G  ++ +QA    DP  G N+ ++Y + ++    F ++ ++G ++      R     +F++ ++A+D G P
Sbjct: 2322 IKAEDGSSKQDESERLLWYCYLTINVEDVNDNRPYFLAAKYFGSVFSSAPNGSNILTVQATDADSGSNAKIKYALLDSAGGLFRLDSSGILRTNTNPARLQLETGKKLLLEVSAKDVESIAGTQPGKPTK-YTTQIEILVSNEEPPKFSQQVYTASINENMETGSTVTRITAT---SSTGAEISY---ENVDTNPRAKILFRVQPDGYIITGDRPDYERGTTYNMQFAAKDKKTLLY--STVKVVINIIDVNDVSPAFLLAINTRNARVLENKPAPTKVISMKAIDDD-GSEPHRRVTYEMKDNPNFQIDASTGMITTKTTL---DREVTPKYDVEVTAKDG---VNKESAILYITVVDQNDQPPVFAPKSYAISVPEDSPIGTSVLDIYATDADVGENAKITYFISKGDPEGKFSIVTSPVKGELVVN-GKLDFETKSSYTLEVTATDG-KFSDTAVVTVTIQ--DVNDLPPVFSSPLYESRIQENTGPGAGVV-MVTASDIDSPTISFSLDDRGKDYFQITPIRASGP--GNVWVGDIRTGSKQLDREESPVKVFTVIANDG---KHTAQAEIRVNLTDVNDNAPRF--PASPYIGY----VEENKPSGTSVMYIQAVDDDDPLAGGNAKLSYELTDSAGDKFSIDPLSGLIKTKVTFDREQTPNKFKVRVKATDAGNP 2970

HSP 6 Score: 103.219 bits (256), Expect = 4.541e-22
Identity = 106/397 (26.70%), Postives = 172/397 (43.32%), Query Frame = 1 
Query:  718 NTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL--SGNSK---------IEINETDPPR-ELFTLQVTDDD-IGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENE---REIKAEIECYDHGSPRNVAHKSLNVHVKDINEF--APRFEKDFQKLKLLENREQGHNILQVSASDRDG-------SAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDE 1830
             T  + ++V D ND  P F   +Y+  I EN P+   ++ V A DKD D  N  IY + +   N + + F I   TG I++ K L    R K+   + A D+       A A + I +++     P   S     N+K           I E  PP+  L  ++  D+D IG N  +   L    ++ F +D    E   ++   S DYEN          +   D G     A   L + ++D++E   +PRF+     L++ EN +Q   +  VSA+D D           + YS  G      F +D +TG++K  +  LDRE   +  + +  +D    P++ +  ++I +LDE+DN P F     +  + EN  S + V        +D DE
Sbjct:  232 GTANIRVNVEDANDQTPVFESSQYRETIAENTPIQTSVLRVRATDKD-DGTNGGIYYYMK---NPVNSYFTIDAITGVIRVAKTLDYNARDKHTLYISARDRGDPPRTSAEATVEISLRENIQGWPLPDSADPKENTKPYFPQSRYTFSIREDFPPKGALLVMRAADNDPIGPNKRLRYSLSGNGVSKFAIDP---ESGVVTLTDSVDYENTPNNHVYDLTVTATDQGPGSLSATTQLLIEIQDVDENKNSPRFDPQQAILEISENLKQNSLVTTVSATDSDSVGNPSSPDGKVVYSIVGGTGLGVFRVDSNTGEVKVAVPSLDREGTSQYTLVVKASDNATFPRSSRLFLMINLLDEDDNFPYFSQPIYIAQVPENQPSGTFV---TVVVGRDADE 618

HSP 7 Score: 93.9745 bits (232), Expect = 3.170e-19
Identity = 152/670 (22.69%), Postives = 283/670 (42.24%), Query Frame = 1 
Query:  415 IHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDAD-ATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQA---LEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAI--DKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVK--DLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND---FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSF-TGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQ----CTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEILTVKKLDREINHNYTVEIRAFDTGLP-MLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNN-KLLFILNQVTGELRVARLL---PIGQFQLFLRASDNGRPPRHNETSLFI 2358
            + V+V D ND+ P+F++    ++V  + P G  L   +A D D  T+A   ++ + +E +  F L+ +   S    +   + Y++       + A D+  +  + A   + + V   +++   F +  Y   + E+      +   +A      S +  +++ G+ ++ +      F I  +TG + L KKL  + +  +   V A  K +    +  + +  KV   D+NDN P+  +   +SK  + ++   ++    +  D D G    V+  +          F ++     I++   I      +   I    +    GS + +   ++NV V D     P F +      + E    G  +  V A     +A LKY+F +G  ++ F ++     I S  + LDRE V    + + VT        GQ     TV + + D ND+ P F       +I E L+  +++   + A D D    N K+L+ +         +     F + + +G+I T   LD E + ++T+ IRA D G P  LS      I V D+NDN P +          +   I+  +  G  ++++ ATD D G+N  +TYS++  N +  F +N+  G + V + L      +F L + A D    PR    ++ I
Sbjct:  887 VEVNVIDVNDHKPEFLQESYWLSVPSSTPAGSSLVTVQAEDMDIGTNAQVRYELLRQENSERFILNDNNQLSTASTLTPNVRYQL------LIRASDSATRNPSSAQVPVYVSVYSPSESPIVFDKSSYNQNLPEDSSANTLVFTAKATRSGSSSGITYELVGGYKQIGEA----MFSIKPDTGQVYLIKKLDFETKSYFPIAVRA--KYSGGAIELASEVVAKVTIVDVNDNGPRF-AFHESSKTVVIDSFSAKDTQLARALDADSGSLGEVTYGIDGGRSTSNLPFNINVKTGMIFATREILYTQGSSYIIIVVATDGATDGS-QKIQKFTVNVQVLDTPR-PPSFPQKTYSAPVTETAGVGDTVTTVRAVYSKPNAFLKYTFVSGNEDNTFCVNGF--GIISVAKSLDREKVAGYTLGMRVT-------LGQHVDDTTVYVNLTDINDDAPHFTSAIYRRSIKEGLAEDTEILPPVIAVDHDFGS-NGKILYSILSGVHPDWDKY----FNIDSATGKITTKMTLDYETHKSHTLFIRAEDNGSPKRLSGIAQVDIDVIDRNDNSPVFA------AAFYRAKISLGAVKGTSVLQVHATDLDSGQNGQITYSIIQGNEEEAFTINE-QGVILVDKSLTTVAADKFSLKVEARDKNASPRSGSVTVEI 1520

HSP 8 Score: 91.2781 bits (225), Expect = 1.944e-18
Identity = 130/522 (24.90%), Postives = 226/522 (43.30%), Query Frame = 1 
Query:  235 YFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDAD--ATSANRVHQYIFKEPTG-TFNLDQSRLPSIGLI-VKKPLDYEVKSQYFAT-LEACDTNKQCNTQALE--IHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADK-MAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYIND--FRLDAVGNEIYSLSSIRS---FDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDG---SAVLKYS-FTGEPNDYFTIDPHTGQIKS------GIRRLDREMVERIEINIIVTDAI-ENPKTGQCTVIIEVLDENDNPP 1728
            YF  +P ++ S  G++ +    D+ T   Q +   EE    + T I    K + Q+E   I V+++D NDN P+F        V EN+P G  +   +A+D D      N    Y   +  G  F++D    P  GLI  K   D E     F   ++A D      + +++  IHV D ND+ P F+++ Y+  + EN P G  ++ V A D+D  +     + F  +  N+  + F I    G++ +   L  + +++Y   +  AD+ M        A + I++ D NDN+P+      N+ + + +    + + T+   D D G N N +  +  +   D  F ++   N   S+  IR+    D E       ++   D G  +      + ++V D+N+  P F   F   ++ E       + ++ A D D      V+ +S + G   + F +DP +   +S      G+   DRE     +I I   D +   P+     V ++VLD NDN P
Sbjct: 2819 YFQITP-IRASGPGNVWVG---DIRTGSKQLDR--EESPVKVFTVIANDGKHTAQAE---IRVNLTDVNDNAPRFPASPYIGYVEENKPSGTSVMYIQAVDDDDPLAGGNAKLSYELTDSAGDKFSID----PLSGLIKTKVTFDREQTPNKFKVRVKATDAGNPRLSASVDGIIHVSDANDHKPKFTEKFYRGSVAENAPPGYSVLRVTATDED--VGPNAEFEFVVVQGND-PHAFYIDPFNGTVLVSGILDYEKKKEYTITLTVADRGMPPLQGDETAYVVIEILDANDNAPEFIPKIYNASV-LEDVGARQPVLTVTAVDKDSGPNGNFTFAIDPRSDPDDAFTIEPNPNNA-SIGIIRTRVPLDQEKTPSFHLKVTATDAGGLQ--GEGEVRINVIDVNDNGPWFVPPFFVGQIKEGVSARQFVTKLKAYDPDAFVKDQVITFSIYNGTVGENFKLDPVSVTNESVDLHSYGV--FDREAAPVWKIGIEAVDNVGPKPQKNFTYVYVDVLDVNDNAP 3318

HSP 9 Score: 88.1965 bits (217), Expect = 1.879e-17
Identity = 115/489 (23.52%), Postives = 204/489 (41.72%), Query Frame = 1 
Query:  355 ILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQA---LEIHVLD-------------QNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKL---SAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDL--NDNSPKITSLSGNSKIEINETDPPRELF-TLQVTD-DDIGVNANVSCQLLQQYIND-----FRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTF 1734
            I+ T  +    +   S + NI V+V D ND  P F   +    +AEN PI   +   RA D D  +   ++ Y+       F +D       G+I V K LDY  + ++   + A D      T A   +EI + +             + +  P F Q  Y   I E+FP    ++ + A D D    NK +   + LS N + + F I   +G + L   +   +      Y   V A D+   +   A   + I+++D+  N NSP+       + +EI+E      L  T+  TD D +G  ++   +++   +       FR+D+   E+    ++ S D E   +    ++  D+ +    +   L +++ D ++  P F +     ++ EN+  G  +  V   D D      Y+    P   + I+P TG I++  + LD+  +   E+ +IV  +    KT    V I V+ + + PP F
Sbjct:  216 IMLTVQVTDGGNPSHSGTANIRVNVEDANDQTPVFESSQYRETIAENTPIQTSVLRVRATDKDDGTNGGIYYYMKNPVNSYFTIDA----ITGVIRVAKTLDYNARDKHTLYISARDRGDPPRTSAEATVEISLRENIQGWPLPDSADPKENTKPYFPQSRYTFSIREDFPPKGALLVMRAADNDPIGPNKRLR--YSLSGNGV-SKFAIDPESGVVTLTDSVDYENTPNNHVYDLTVTATDQGPGSL-SATTQLLIEIQDVDENKNSPRFDPQ--QAILEISENLKQNSLVTTVSATDSDSVGNPSSPDGKVVYSIVGGTGLGVFRVDSNTGEVK--VAVPSLDREGTSQYTLVVKASDNATFPRSSRLFLMINLLDEDDNFPYFSQPIYIAQVPENQPSGTFVTVVVGRDADEGFNPSYTVI-TPGVPYKIEPSTGVIRTS-KSLDQSELSTRELQVIVRVSTAGSKTADGQVNITVISKVNRPPVF 690

HSP 10 Score: 83.5741 bits (205), Expect = 4.219e-16
Identity = 185/774 (23.90%), Postives = 320/774 (41.34%), Query Frame = 1 
Query:  106 IFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTG--------------TFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFP----VGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQ-KYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSC---------QLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPM-----LSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRV----ARL-LPIGQFQLFLRAS 2313
            + L ++ Y+   + V   + E++P   VI  +    P+   +    +     +   GD++L + +D E+    H M   E             +  +Q+  +++ V V D NDN P +++ ++   V  N   G  +Y   A D D  S+  V  Y  K P+               T N    ++   G +  +  D +V +  +            N        L      P FS+  Y   + E+      VG  II   +I   + L  KI+ G       N+ + FI   + G I L   L  +  Q +Y  KV A +++       V ++ I V + ND+ P          ++I E+     L   +VT  D    ++ +C         +  ++    F +D    +I   S   + DYE++R    ++   D G         +NV + ++N+  P F K   + ++ E    G ++  V A D DG AV  YS  G     F++D  TG I      LD     +  + ++  D+     T   +V   V D N+N P F +  G  +I EN    +K+  ++ ATD D+ + N ++ + ++    SQ     EP      +G + ++  LDRE   +Y   I+A D          L  +   TI VED NDN P ++   + + G    ++ +++P G  I+ +QATD D G N+ + Y+++++   LF L+  +G LR     ARL L  G+ +L L  S
Sbjct: 1722 VRLVFVHYRPDQKHVRVNVREDTPTGSVIATVRRYFPNGIVSLLLPEKANFSVRANGDVILLTPLDYES-QQFHRMTVRE-------------ELGNQTNDVDVEVVVLDVNDNRPIWMERERLARVNTNSRAGAQVYQLEARDEDDGSSGLVG-YQLKSPSNDAKRKRRSPPQHPFTINPKTRQMEVAGSLKDQRYDLDVFAFDYGIPRLTSDTITLNVDGSAAGQLP-----PRFSKVSYHFMVSEDAKYLSLVG--IILARSI-SGARLDYKIVSG-------NVGDKFIAMGD-GRILLNSLLDFERDQTQYNLKVKATEQIPDGLDSTV-DVKIDVINANDHFPYFDQQL--YSVQIPESTAVGVLVQ-EVTAKDCDCLSSCTCSPGFLTYSIEPSKEQGGKFYIDPATGKI---SVSVALDYEDQRYHLLKVYATDKGKKSFQGLCFVNVTLTNVNDNRPTFLKSAYEFRVAEGAATGESLAIVVAVDADGDAV-TYSKAGGALQ-FSVDQSTGVITLN-SALDPNK-NQYTLQVMAKDS--GGLTSTVSVTFNVADANNNVPQFTN-CGTVSIRENDPRDTKIT-QLTATDADRGQ-NGQITYSIEDA-SSQTLFSIEP-----RTGVVRSLTSLDRENKDSYNAIIKAEDGSSKQDESERLLWYCYLTINVEDVNDNRPYFLA--AKYFG----SVFSSAPNGSNILTVQATDADSGSNAKIKYALLDSAGGLFRLDS-SGILRTNTNPARLQLETGK-KLLLEVS 2434

HSP 11 Score: 83.1889 bits (204), Expect = 6.652e-16
Identity = 112/461 (24.30%), Postives = 190/461 (41.21%), Query Frame = 1 
Query: 1039 HKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSP-RNVAHKSLNVHVKD-INEFA------------PRFEKDFQKLKLLENREQGHNILQVSASDRDG---SAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEI-NIIVTDAIENP----KTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDK----DEINNKVLFQLQHTFDSQNRRISEPIFKV-TESGEI-LTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARL-----LPIGQFQLFLRASDNG 2322
            H   ANI + V+D ND +P   S      I  N T     +  ++ TD D G N  +   +     + F +DA+   I      ++ DY    +    I   D G P R  A  ++ + +++ I  +             P F +      + E+      +L + A+D D    +  L+YS +G     F IDP +G + +    +D E      + ++ VT   + P     T Q  + I+ +DEN N P F     +  ISENL   S V   ++ATD D        + KV++ +              +F+V + +GE+ + V  LDRE    YT+ ++A D      S+     I + D++DN P +  P      I+   +  N P G  +  +   D D  E  N +Y+V+    + + +   TG +R ++      L   + Q+ +R S  G
Sbjct:  230 HSGTANIRVNVEDANDQTPVFESSQYRETIAEN-TPIQTSVLRVRATDKDDGTNGGIYYYMKNPVNSYFTIDAITGVI---RVAKTLDYNARDKHTLYISARDRGDPPRTSAEATVEISLRENIQGWPLPDSADPKENTKPYFPQSRYTFSIREDFPPKGALLVMRAADNDPIGPNKRLRYSLSGNGVSKFAIDPESGVV-TLTDSVDYENTPNNHVYDLTVTATDQGPGSLSATTQLLIEIQDVDENKNSPRFDPQQAILEISENLKQNSLVT-TVSATDSDSVGNPSSPDGKVVYSIVGG-------TGLGVFRVDSNTGEVKVAVPSLDREGTSQYTLVVKASDNATFPRSSRLFLMINLLDEDDNFPYFSQP------IYIAQVPENQPSGTFVTVVVGRDAD--EGFNPSYTVITPG-VPYKIEPSTGVIRTSKSLDQSELSTRELQVIVRVSTAG 668

HSP 12 Score: 82.4185 bits (202), Expect = 1.005e-15
Identity = 133/590 (22.54%), Postives = 242/590 (41.02%), Query Frame = 1 
Query:  652 LDYEVKSQYFATLEACDTN--KQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSS-------IRSFDYENEREIKAEIEC-YDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMV----ERIEINIIVTDAIEN--PKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAH-KNFTIYV--EDQNDNDPDWVTPL---SSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN----NNKLLFILNQVTGELRVARLLPIGQFQ---LFLRASDNGRPPR 2334
            LD  + S+Y   + A D N      T  +E++V+D ND+ P F Q+ Y + +  + P G  ++ V+A D D     ++ Y   EL        FI+ +N   +     L+  VR  Y+  + A+D        A   +++ V   ++ SP +   S  ++    ++     +FT + T    G ++ ++ +L+  Y        +G  ++S+         I+  D+E +      +   Y  G+    +     V + D+N+  PRF        ++ +     +     A D D  ++ + ++  +     +  P    +K+G+    RE++        I ++ TD   +   K  + TV ++VLD    PP+F   +    ++E           +  T      + +K    L++TF S N    +  F V   G I   K LDRE    YT+ +R        L  H  + T+YV   D ND+ P + + +   S   G+     T   PP      + A D D+G N  + YS+++    +    F ++  TG++     L     +   LF+RA DNG P R
Sbjct:  859 LDAHLASKYTFNVRATDRNFRNMFATAQVEVNVIDVNDHKPEFLQESYWLSVPSSTPAGSSLVTVQAEDMDIGTNAQVRY---ELLRQENSERFILNDNN-QLSTASTLTPNVR--YQLLIRASDSATRNPSSAQVPVYVSVYSPSE-SPIVFDKSSYNQNLPEDSSANTLVFTAKATRS--GSSSGITYELVGGY------KQIGEAMFSIKPDTGQVYLIKKLDFETKSYFPIAVRAKYSGGAIELASEVVAKVTIVDVNDNGPRFAFHESSKTVVIDSFSAKDTQLARALDADSGSLGEVTYGIDGGRSTSNLPFNINVKTGMIFATREILYTQGSSYIIIVVATDGATDGSQKIQKFTVNVQVLD-TPRPPSFPQKTYSAPVTETAG--------VGDTVTTVRAVYSKPNAFLKYTFVSGNE---DNTFCVNGFGIISVAKSLDREKVAGYTLGMRV------TLGQHVDDTTVYVNLTDINDDAPHFTSAIYRRSIKEGL--AEDTEILPP------VIAVDHDFGSNGKILYSILSGVHPDWDKYFNIDSATGKITTKMTLDYETHKSHTLFIRAEDNGSPKR 1407

HSP 13 Score: 77.411 bits (189), Expect = 4.103e-14
Identity = 126/493 (25.56%), Postives = 207/493 (41.99%), Query Frame = 1 
Query:  322 QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPT-GTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQ-CNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQII-AVEAIDKD--SDLFN---KIIYGFHELSDNNIRNTFIITENTG----SIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPP-RELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVK--DINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGE----PNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVT---DAIENPKTGQCTVIIEVLDENDNPPTF 1734
            Q E+   E++ I++ +  A  K++D      ++++V  K +  P F     +V V E       L+   A+D    S +R  QY       G F +D+    S  L  K   +YE   +Y   +EA  ++ Q   + +L + V ++ D  P FS   YQ+ + E+   G  +   +  ID D  SD F+   + I   H L +      F +T+ +G     ++   KL A +  KY F V A D+       A A + + V D+ND+ P+   L  +  + +  + P    L T+Q  D DIG NA V  +LL+Q  N  R     N   S +S  + +   +  I+A        + RN +   + V+V     +E    F+K      L E+      +    A+    S+ + Y   G         F+I P TGQ+   I++LD E      I +       AIE     +    + ++D NDN P F
Sbjct:  650 QSELSTRELQVIVRVS-TAGSKTADG----QVNITVISKVNRPPVFKNTPYSVKVPEEMGPLPNLFCIAAVD----SLSRPVQYTLAPGADGLFEVDKD---SGRLHTKNSFNYENVDRYNLRIEARTSSVQEVASASLTVEVTEEKD-LPKFSSDSYQLTVDESAAPGTTLAPGLLIIDSDTSSDQFDCSMEAITSLHTLYN------FEVTQQSGRCFLRVQAGGKLDAHLASKYTFNVRATDRNFRNMF-ATAQVEVNVIDVNDHKPEF--LQESYWLSVPSSTPAGSSLVTVQAEDMDIGTNAQVRYELLRQE-NSERFILNDNNQLSTASTLTPNVRYQLLIRAS-----DSATRNPSSAQVPVYVSVYSPSESPIVFDKSSYNQNLPEDSSANTLVFTAKATRSGSSSGITYELVGGYKQIGEAMFSIKPDTGQVYL-IKKLDFETKSYFPIAVRAKYSGGAIE--LASEVVAKVTIVDVNDNGPRF 1111

HSP 14 Score: 57.3806 bits (137), Expect = 4.174e-8
Identity = 41/138 (29.71%), Postives = 66/138 (47.83%), Query Frame = 1 
Query: 1933 TVKKLDREINHNY-TVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIG---QFQLFLRASDNGRPPR 2334
            T K + R+ N+ Y  + ++  D G P  S   N  + VED ND  P +          +   I  N+P    +++++ATD D G N  + Y + N     F ++ +TG +RVA+ L      +  L++ A D G PPR
Sbjct:  203 TGKPIVRDDNNPYIMLTVQVTDGGNPSHSGTANIRVNVEDANDQTPVF------ESSQYRETIAENTPIQTSVLRVRATDKDDGTNGGIYYYMKNPVNSYFTIDAITGVIRVAKTLDYNARDKHTLYISARDRGDPPR 334

HSP 15 Score: 51.6026 bits (122), Expect = 2.859e-6
Identity = 55/243 (22.63%), Postives = 104/243 (42.80%), Query Frame = 1 
Query:  403 ESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYI--FKEPTGTFNLDQS-RLPSIGLI-VKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKII-YGFH--ELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSL 1110
            E+  + + + D NDN P+F+      +V E+      +    A+D D+         I    +P   F ++ +    SIG+I  + PLD E    +   + A D         + I+V+D NDN P F    +  +I E     Q +  ++A D D+ + +++I +  +   + +N   +   +T  +  +        +    +K  + A D +     K    +++ V D+NDN+PK  SL
Sbjct: 3081 ETAYVVIEILDANDNAPEFIPKIYNASVLEDVGARQPVLTVTAVDKDSGPNGNFTFAIDPRSDPDDAFTIEPNPNNASIGIIRTRVPLDQEKTPSFHLKVTATDAGGLQGEGEVRINVIDVNDNGPWFVPPFFVGQIKEGVSARQFVTKLKAYDPDAFVKDQVITFSIYNGTVGENFKLDPVSVTNESVDLHSYGVFDREAAPVWKIGIEAVDNVGPKPQKNFTYVYVDVLDVNDNAPKDGSL 3323
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079])

HSP 1 Score: 254.218 bits (648), Expect = 1.094e-69
Identity = 238/781 (30.47%), Postives = 364/781 (46.61%), Query Frame = 1 
Query:  145 TVTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIF---KEPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACDT-NKQCNTQAL-EIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSK--IEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEI------YSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            ++ +++ EE P + +IG++   H   +    +   + +P+L++  K GD+  +   ID ET+     +   +  C L+  +   D   + S   I   + V D NDN P+F     T++V EN  +G    +  A D D +  N V  Y      +    F L  +     +LP   LIV   LD E+K  Y  T++A D  N Q  +QAL  + V D NDN P F    Y+ E+ EN PVG  ++ V+A D D     +I Y  H+  D  +     I   TG I ++  L  +      F V A DK       +   + I+V D NDN+P +      L  +S+    I+E  P      L QV+D D G NA V+C +       F+L    +        Y L +    DYE  +E + EI   D G+P   +  SL V V D+N+ +P F     ++   E  + G  IL V+A+D D    A L Y+  G+      F IDP+TG++K+    LDRE  ER E  +   D       G  TV+I+VLD NDN P F+     F++ EN+   S V G +   D DK E N  V   ++     F  QN            +G IL+    DRE   +YT  ++A D G P  S++   TI V D+NDNDP    P  S+     ++  A SP  ++ + ++A D D G N+++ +S+   N   LF ++  +GE+ +A+ +     G  +L +R SD G+PPRH    + I++N
Sbjct:   23 SILYRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGAPYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGK-PCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRD-SERNGVADYALTAGPDAATLFGLQVADDRGGKLPQ--LIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDP-VPKLLRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQP-KSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDV--PFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKART-PLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPV-GMVTVLDMDKGE-NAHVHLSVEPDGGKFVVQNG-----------TGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKP--SNSSFRQLSPVA-SPDSHVDV-VEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVN 777
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079])

HSP 1 Score: 256.144 bits (653), Expect = 1.765e-69
Identity = 238/781 (30.47%), Postives = 363/781 (46.48%), Query Frame = 1 
Query:  145 TVTFKIMEESPIDMVIGNIVHLHPSFNKASYF---IKSPFLKLSDK-GDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSES-INIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIF---KEPTGTFNLD-----QSRLPSIGLIVKKPLDYEVKSQYFATLEACDT-NKQCNTQAL-EIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSK--IEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEI------YSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFTGEP--NDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQ---HTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKL-LFILNQVTGELRVARLLPI---GQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            ++ +++ EE P + +IG++   H   +    +   + +P+L++  K GD+  +   ID ET+     +   +  C L+  +   D   + S   I   + V D NDN P+F     T++V EN  +G    +  A D D +  N V  Y      +    F L        +LP   LIV   LD E+K  Y  T++A D  N Q  +QAL  + V D NDN P F    Y+ E+ EN PVG  ++ V+A D D     +I Y  H+  D  +     I   TG I ++  L  +      F V A DK       +   + I+V D NDN+P +      L  +S+    I+E  P      L QV+D D G NA V+C +       F+L    +        Y L +    DYE  +E + EI   D G+P   +  SL V V D+N+ +P F     ++   E  + G  IL V+A+D D    A L Y+  G+      F IDP+TG++K+    LDRE  ER E  +   D       G  TV+I+VLD NDN P F+     F++ EN+   S V G +   D DK E N  V   ++     F  QN            +G IL+    DRE   +YT  ++A D G P  S++   TI V D+NDNDP    P  S+     ++  A SP  ++ + ++A D D G N+++ +S+   N   LF ++  +GE+ +A+ +     G  +L +R SD G+PPRH    + I++N
Sbjct:  100 SILYRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGAPYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGK-PCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRD-SERNGVADYALTAGPDAATLFGLQVADDRGGKLPQ--LIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDP-VPKLLRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQP-KSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDV--PFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKART-PLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPV-GMVTVLDMDKGE-NAHVHLSVEPDGGKFVVQN-----------GTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKP--SNSSFRQLSPVA-SPDSHVDV-VEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVN 854
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755])

HSP 1 Score: 251.906 bits (642), Expect = 8.793e-69
Identity = 234/801 (29.21%), Postives = 368/801 (45.94%), Query Frame = 1 
Query:  100 CIIFLFYLCYQGSCQTV----TFKIMEESPIDMVIGNI---VHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRI--DLETI--CA---QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI------TSLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEI------YSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIR-RLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            C++ L  +     C  V     +K+ EE P + +IG++   + L  S +     + SP+L++  K   + ++ I  D ET+  C    + + C  E E  +   +          E I   + V D NDN P+F  P  T+++ EN   G    +  A+D D+ S N V +Y      +    F L  +     ++P +  IV   LD E K  Y   +   D  K  + ++  L I V DQNDN P F + +Y+ E+ EN P G  ++ V A D D+     I Y  H+ SD  ++    I  +TG I ++  +  +     KF V A D+   +   + A + I +KD NDN+P I        +  N    I+E  P      L QV+D D G NA V+C +       F+L             Y L +    DYE  ++ + EI   D G+P   +  SL V V DIN+  P F     ++   E+ + G  ++ V A+D D    A L YS         F I+ +TG+I+  +R +LDRE VER E  +   D     KTG   V+I V D NDN P F+     F+++EN+   + V G +  +D DK E +   LF      +  N +    I +   +G IL+    DRE    YT  ++A D G P  S++   TI V D+NDN P    P +S       ++  +SPP   +  ++A D D G N+ + Y++   N   LF ++  +GE+++A+       G  +L +R SD G+PPRH    + +++N
Sbjct:   22 CLVLL-TIVLMVPCGAVPSNNIYKLSEEQPPNTLIGSLAADLGLPDSGHLYKLEVGSPYLRVDSKTGEIYTTEIPIDRETLSDCRNLFEDDKCFLEFEVSITDMVKGIGLGPRLIEGI---IEVLDINDNTPQFSSPILTLSIPENTHTGTLFSIPVAVDRDSGS-NGVAEYALSAGPDANQLFGLQVAEDVDEKIPQV--IVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVRANDADTGANGDIDYSLHQASD-TVQRLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRGPNS-KSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDV--PFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIR--VRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPV-GVVTVSDADKGENSQVTLF-----VEPDNGKF---IIQ-NGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANS----SYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTALVHVYVN 795
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh1b (protocadherin-1 [Source:NCBI gene;Acc:101174755])

HSP 1 Score: 252.292 bits (643), Expect = 2.538e-68
Identity = 234/801 (29.21%), Postives = 368/801 (45.94%), Query Frame = 1 
Query:  100 CIIFLFYLCYQGSCQTVT----FKIMEESPIDMVIGNI---VHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRI--DLETI--CA---QHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFK---EPTGTFNLDQS-----RLPSIGLIVKKPLDYEVKSQYFATLEACDTNK--QCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKIT------SLSGNSKIEINETDPPRELFTL-QVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEI------YSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGS--AVLKYSFT-GEPNDYFTIDPHTGQIKSGIR-RLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNK-LLFILNQVTGELRVARLLP---IGQFQLFLRASDNGRPPRHNETSLFIFIN 2367
            C++ L  +     C  V     +K+ EE P + +IG++   + L  S +     + SP+L++  K   + ++ I  D ET+  C    + + C  E E  +   +          E I   + V D NDN P+F  P  T+++ EN   G    +  A+D D+ S N V +Y      +    F L  +     ++P +  IV   LD E K  Y   +   D  K  + ++  L I V DQNDN P F + +Y+ E+ EN P G  ++ V A D D+     I Y  H+ SD  ++    I  +TG I ++  +  +     KF V A D+   +   + A + I +KD NDN+P I        +  N    I+E  P      L QV+D D G NA V+C +       F+L             Y L +    DYE  ++ + EI   D G+P   +  SL V V DIN+  P F     ++   E+ + G  ++ V A+D D    A L YS         F I+ +TG+I+  +R +LDRE VER E  +   D     KTG   V+I V D NDN P F+     F+++EN+   + V G +  +D DK E +   LF      +  N +    I +   +G IL+    DRE    YT  ++A D G P  S++   TI V D+NDN P    P +S       ++  +SPP   +  ++A D D G N+ + Y++   N   LF ++  +GE+++A+       G  +L +R SD G+PPRH    + +++N
Sbjct:   22 CLVLL-TIVLMVPCGAVPSNNIYKLSEEQPPNTLIGSLAADLGLPDSGHLYKLEVGSPYLRVDSKTGEIYTTEIPIDRETLSDCRNLFEDDKCFLEFEVSITDMVKGIGLGPRLIEGI---IEVLDINDNTPQFSSPILTLSIPENTHTGTLFSIPVAVDRDSGS-NGVAEYALSAGPDANQLFGLQVAEDVDEKIPQV--IVIGNLDREKKDSYDLNIRVVDGGKPPRASSALLRITVTDQNDNAPKFEKNQYEAELPENSPPGHSVLQVRANDADTGANGDIDYSLHQASD-TVQRLLRIDRSTGIIYVKGLVDREEDNLLKFYVVARDRGPNS-KSSKAQVTISIKDQNDNAPAIEIRGIGLVIHQNFVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDV--PFQLRPASESANDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNTPSFSPALLEVNFAEDNQPGDKVIDVVATDADSGVNAELVYSIIESSAASLFEINSNTGEIR--VRNQLDREDVERYEFGVAAADKGVPSKTGTAIVVINVEDRNDNDPKFMLSGYSFSVNENMPPLNPV-GVVTVSDADKGENSQVTLF-----VEPDNGKF---IIQ-NGTGTILSSISFDREKESTYTFRLKAVDAGDPPRSSYVGVTINVLDENDNAPYVTKPANS----SYTHLKPSSPPDTPVEVVKAEDIDAGVNAELYYTITGGNPHGLFQISHNSGEIKLAQGFTGKHKGLHRLVVRVSDKGKPPRHTTALVHVYVN 795
[Close]
BLAST of Protocadherin vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238])

HSP 1 Score: 248.44 bits (633), Expect = 1.168e-67
Identity = 232/794 (29.22%), Postives = 363/794 (45.72%), Query Frame = 1 
Query:   94 DFCIIFLFYLCYQ---GSCQTVTFKIMEESPIDMVIGNI------VHLHPSFNKASYFI--------KSPFLK-LSDKGDLMLSS-RIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPS----IGLIVKKPLDYEVKSQYFATLEACD--TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKI----TSLSGNSKIEINETDPPR-ELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPN-DYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-NNKLLFILNQVTGELRV-ARLLP--IGQFQLFLRASDNGRPPR-HNETSLFIFIN 2367
            DF ++     C        Q + + I EE   +++IGNI       H   +   ++  +         SP ++ L + G++  +S RID E +C       E+ EC  +  ++     +D    I I + V D NDN P F  P   +++ EN  I     +  A D D T  N VH+Y        F LD    P       LIV++ LD E K  Y   ++  D  + ++ +T  L++ V D NDN P F + + ++ I EN P+G  ++ ++A D D     +I Y F        +  F +   +G I +Q+ L  +    +K  V A+D  +     A A + I V D+NDN P I         N  + ++E DP   ++  + V+D D  +N  V C + +     F L AV +  Y L +    DYE  +E   +I   D G P       + V ++D N+  P F +   +L ++EN ++   +  +SA+D D     +  +   PN  +F +D  TG + +  R  DRE  +R    +   D    P   Q  VI+ VLDENDN P F      F +SENL  YS V G I  TD D  E        L    D++N  I +P      SG I +    DRE   +YT ++RA D+G P  S+    TI V D NDN P  + P  S+     V ++  S PG ++ ++ A D D G N+ + Y++++ NNK LF ++ VTG + +  +  P  IG  +L +  SD G P   H    +F+++N
Sbjct:    5 DFYLLGSLLACIWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTSAATGASANLVYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSF--EDAECSFEIEVVVL--PNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPD-TGPNSVHKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSS---SPARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDV--PFHLKAVYDNQYLLETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTAS-RVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTV-GVITVTDSDAGE---NAAISLSILNDNEN-FILDPF-----SGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVIDVNDNTPIVIYP-PSNTSFKLVPLS--SIPGSVVAEVFAVDSDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVN 774
[Close]
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000033639.1 (SMESG000033639.1)

HSP 1 Score: 2148.24 bits (5565), Expect = 0.000e+0
Identity = 1079/1080 (99.91%), Postives = 1080/1080 (100.00%), Query Frame = 1 
Query:   85 MKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMXXXXXXXXXXXXXXXNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV 3324
            MKIDFCIIFLFYLC+QGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMSIIIVLIGITGFISIFLIIAIICVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMDDDSADSGKGGSEDDNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV
Sbjct:    1 MKIDFCIIFLFYLCHQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMSIIIVLIGITGFISIFLIIAIICVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMDDDSADSGKGGSEDDNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV 1080
[Close]
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000033639.1 (SMESG000033639.1)

HSP 1 Score: 2093.93 bits (5424), Expect = 0.000e+0
Identity = 1054/1054 (100.00%), Postives = 1054/1054 (100.00%), Query Frame = 1 
Query:  163 MEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMXXXXXXXXXXXXXXXNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV 3324
            MEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMSIIIVLIGITGFISIFLIIAIICVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMDDDSADSGKGGSEDDNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV
Sbjct:    1 MEESPIDMVIGNIVHLHPSFNKASYFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMSIIIVLIGITGFISIFLIIAIICVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLYFPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCSTLGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMDDDSADSGKGGSEDDNGLHQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINHCPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNSNIPQDYQISKSPTTNNESLPVTSAIESNRV 1054
[Close]
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000079318.1 (SMESG000079318.1)

HSP 1 Score: 473.396 bits (1217), Expect = 1.417e-147
Identity = 321/887 (36.19%), Postives = 484/887 (54.57%), Query Frame = 1 
Query:   97 FCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKAS---YFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFATLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKL--KLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTG----LPMLSAHKNFTIYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVM-------------NNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPRHNETSLFIFINGDEVATLNMXXXXXXXXXXXXXXXXXXXXXXCVRRRPRYNNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSY-YPSGN---FLSDNTSVLYFPNEIDSSVPMNTFV 2679
            FC+  +F L        ++ ++ EE P +  IG+I+   P   +++   +  +S F  ++++G +++   IDLET+C+Q+++CC E  CILK  I+  +K  +   S+ I V + DKND+ P F  P+  + ++E   IG  + L  A D D +S  R+  Y   EPT +F LD S+LPSI L V K LD+E K QY A L+ACD +  C TQ L IH+ D+NDN P F  + Y + I E+  +G  I  V+A D+DS LF  I Y      D +I++TF +   +G IKL+KKLS   R +Y F++ A D   +   +++ ++ I V+D+ND+ P+I  ++  S ++I E  P + + TLQ+ D D G N  V C L       F L     +IYSL S+R FD+E E++I A + C D G P   + K + + + D+NEF P F+   Q L   + EN E G  ++ V A D+D SAVLKY       +YF ID ++G I+     +DRE V  I   + V D+   PKT    V I VLD NDN P F      F+I EN +  S++ G+I ATD D+DE N  + F L+++++    +  +  F V  +G I T+ KLDREI   Y +EI A D+     +P+ S   N T+ V D+ND  P W     +H   + +NIT    PG  +++LQATD D G N  V + ++               +   FI+N  TG L ++++L  G   L  RASD G+P ++++  L I I GDE   LNM+II V+I +T  IS+FLI+AIICVRR+P   ++ T       +P       V    G ++DE    YPSGN   +++++    + P   D ++PM T+ 
Sbjct:    8 FCVNTVFALS-----DKISIQMHEEIPPNSEIGSILSAIPHNLRSTSLEFITESDFFIVTEEGKILVRKLIDLETLCSQYKLCCGEPVCILKANILLNNKEKEVVSSVEIQVQILDKNDHNPIFETPETKIVISEFSQIGISISLTSATDKDHSSQYRIQNYKLDEPTNSFILDISQLPSIFLKVSKKLDFEEKKQYHAKLKACDED-NCTTQNLIIHIKDENDNQPIFETETYNLTIKEDVQIGSIIGQVKANDRDSGLFGTIKYSIRTDFDTDIQSTFYVETLSGRIKLKKKLSTFTRSRYPFRIVARDSDPINPKQSLCSVTILVEDVNDHKPEIRIIADLSSLKIQEEIPSKLITTLQIVDQDKGPNGIVYCHLDPVCEGSFELQNRSKDIYSLRSVRKFDHEVEQKIDAIVICKDQGEPSLESRKIIPIIITDLNEFRPTFKDKSQYLLGHVWENSEFGTKVMTVKAQDQDKSAVLKYQIDNYGAEYFEIDQNSGLIRCTNNLIDRERVSSISFTVHVMDSDTEPKTASVEVKITVLDANDNSPLFSTNLPQFSIIEN-TGPSQLVGQINATDADQDE-NALISFSLRNSWNGNTMQRHDNYFNVLPTGHIETLLKLDREICDLYILEIMASDSAKSPQIPLTSI-VNITLRVLDENDESPTW-----THPDNNILNITDTMRPGDHLLQLQATDRDVGANGKVRFEIIKQYRKEDGSSSFNQGSSQYFIVNSSTGALWISQMLHSGTVILLFRASDYGQPAKYSDHKLVINIFGDESGNLNMTIIAVMITVTAVISLFLIVAIICVRRKPPKYHSPTSSILTKEQP-------VPDWIGLNSDESLLAYPSGNKSPYITNSHRASFIPPMNDGTIPMRTYA 873
[Close]
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000051413.1 (SMESG000051413.1)

HSP 1 Score: 465.307 bits (1196), Expect = 1.699e-145
Identity = 280/798 (35.09%), Postives = 458/798 (57.39%), Query Frame = 1 
Query:   73 KLLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKA-----SYFIKSPFLKLSDK-GDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNL--DQSRLPSIGLIVKKPLDYEVKSQYFATLEACD-TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNS----KIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTP--LSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMN-----NNKLLFILNQVTGELRVARL-LPIGQFQLFLRASDNGRPPRHNETSLFIFI---NGDEVATLNM 2394
            K LE KI    +   YL    S Q +TF ++EE+   +++GN+ +   S  K       + + S + ++ ++  ++ + S IDL+TIC+    CC++ +C+++T ++ ++ S  +S S ++ V V D +DN+P F+  KQ + ++E   I   + +D A+D D +  N+   Y F + + TF L   Q     + ++V + L+YE+K  YF  L+ CD T + C  +++ + V+D+NDN P F +++Y ++I E++P+G++I+ V A D DS LFNK  YGF   S+ N+++ F I + +G I L++ LS   + +Y F V+A D +++ F K  A++ I+++D+NDN P I+ L G       I I+E  PP+ LF++ V+D D G+NA V+C L  +  +   +     EIY + +IRSFDYE  + I+AEI C D GSP  ++ K++ + + D+NEF P    +F++L   EN  +   I+ + ASD+D  A+L+YS       YFTI+  TG+I      LD+EM + ++  + +TD++ NP T    V + +LD+NDN P F+  +  F I E LS YSK+  RI A D DKDEIN+ ++F+L HT++++   + E IF V+  GEI TV  +DRE + NYT+ I A D G P  S   N TI V D NDN P WV+P  L+S       NI+  +  G ++ +L+A D D  +   ++Y +M+       +    LN+ +G L + +  L  G+  L + A D+G PP  N  +L I +   N +  + LNM
Sbjct:    3 KELEGKIILFHLLCGYLPSIISSQEITFHLVEENKRGLILGNLNYFITSKLKTDPRITEFHVSSKYFEIDNQTKNVQMVSTIDLDTICSTDSECCDKEKCVIETKVVVQEYSQYKS-SFSLKVEVKDLDDNFPLFLDDKQIIKLSEKISINTSISIDGAMDKDFSKINQKKNYQFFDESMTFQLFVYQYDPDILSIMVMRSLNYELKQIYFCKLKVCDKTYQNCVRKSIIVQVIDENDNEPIFVEKKYLVKIPESYPIGKKILKVTAKDADSSLFNKTFYGFQ--SNYNVKSIFNIEKESGVISLKQSLSINKKSRYLFTVYAIDALSVTFKKDYADVEIEIEDVNDNYPIISLLHGYMPDPYAIRIDENTPPKTLFSIHVSDKDTGINAVVNCSLRVRRKDLLEMIKADMEIYQIRTIRSFDYEILQLIEAEILCIDSGSPALLSRKAIKIIIVDVNEFEPSIRNNFEELSFKENIPEHKFIMSIDASDKDKGAILRYSLDEIGRIYFTINSRTGEIIMSNVTLDKEMNDSVKFKVFITDSLINPHTATMFVTVTILDQNDNAPQFVH-TLPFTIQEGLSFYSKLSTRIEAKDADKDEINHSIIFRLLHTYNNKMELLHEKIFDVSSKGEIETVVTIDREKDSNYTLTILAQDKGNPPKSTSTNITITVIDVNDNSPVWVSPPSLNSSEPEARFNISKEAAIGSIVAQLKALDQDQDDFGKISYVIMSTESHYQGEQFLTLNETSGILSIHQHPLSYGRTLLKISAHDHGHPPLKNYATLIINVQQPNDNLFSGLNM 796
[Close]
BLAST of Protocadherin vs. Planmine SMEST
Match: SMESG000051413.1 (SMESG000051413.1)

HSP 1 Score: 464.922 bits (1195), Expect = 2.085e-145
Identity = 281/798 (35.21%), Postives = 459/798 (57.52%), Query Frame = 1 
Query:   73 KLLEMKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKA-----SYFIKSPFLKLSDK-GDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKDKSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRALDADATSANRVHQYIFKEPTGTFNLDQSRL-PSI-GLIVKKPLDYEVKSQYFATLEACD-TNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQIIAVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKVRQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNS----KIEINETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLSSIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKDFQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQIKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTFIDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNRRISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFTIYVEDQNDNDPDWVTP--LSSHGGIHTVNITANSPPGYLIIKLQATDPDYGENSNVTYSVMNN-----NKLLFILNQVTGELRVARL-LPIGQFQLFLRASDNGRPPRHNETSLFIFI---NGDEVATLNM 2394
            K LE KI    +   YL    S Q +TF ++EE+   +++GN+ +   S  K       + + S + ++ ++  ++ + S IDL+TIC+    CC++ +C+++T ++ ++ S  +S S ++ V V D +DN+P F+  KQ + ++E   I   + +D A+D D +  N+   Y F + + TF L   +  P I  ++V + L+YE+K  YF  L+ CD T + C  +++ + V+D+NDN P F +++Y ++I E++P+G++I+ V A D DS LFNK  YGF   S+ N+++ F I + +G I L++ LS   + +Y F V+A D +++ F K  A++ I+++D+NDN P I+ L G       I I+E  PP+ LF++ V+D D G+NA V+C L  +  +   +     EIY + +IRSFDYE  + I+AEI C D GSP  ++ K++ + + D+NEF P    +F++L   EN  +   I+ + ASD+D  A+L+YS       YFTI+  TG+I      LD+EM + ++  + +TD++ NP T    V + +LD+NDN P F+  +  F I E LS YSK+  RI A D DKDEIN+ ++F+L HT++++   + E IF V+  GEI TV  +DRE + NYT+ I A D G P  S   N TI V D NDN P WV+P  L+S       NI+  +  G ++ +L+A D D  +   ++Y +M+       +    LN+ +G L + +  L  G+  L + A D+G PP  N  +L I +   N +  + LNM
Sbjct:    3 KELEGKIILFHLLCGYLPSIISSQEITFHLVEENKRGLILGNLNYFITSKLKTDPRITEFHVSSKYFEIDNQTKNVQMVSTIDLDTICSTDSECCDKEKCVIETKVVVQEYSQYKS-SFSLKVEVKDLDDNFPLFLDDKQIIKLSEKISINTSISIDGAMDKDFSKINQKKNYQFFDESMTFQLFVYQYDPDILSIMVMRSLNYELKQIYFCKLKVCDKTYQNCVRKSIIVQVIDENDNEPIFVEKKYLVKIPESYPIGKKILKVTAKDADSSLFNKTFYGFQ--SNYNVKSIFNIEKESGVISLKQSLSINKKSRYLFTVYAIDALSVTFKKDYADVEIEIEDVNDNYPIISLLHGYMPDPYAIRIDENTPPKTLFSIHVSDKDTGINAVVNCSLRVRRKDLLEMIKADMEIYQIRTIRSFDYEILQLIEAEILCIDSGSPALLSRKAIKIIIVDVNEFEPSIRNNFEELSFKENIPEHKFIMSIDASDKDKGAILRYSLDEIGRIYFTINSRTGEIIMSNVTLDKEMNDSVKFKVFITDSLINPHTATMFVTVTILDQNDNAPQFVH-TLPFTIQEGLSFYSKLSTRIEAKDADKDEINHSIIFRLLHTYNNKMELLHEKIFDVSSKGEIETVVTIDREKDSNYTLTILAQDKGNPPKSTSTNITITVIDVNDNSPVWVSPPSLNSSEPEARFNISKEAAIGSIVAQLKALDQDQDDFGKISYVIMSTESHYQGEQFLTLNETSGILSIHQHPLSYGRTLLKISAHDHGHPPLKNYATLIINVQQPNDNLFSGLNM 796
The following BLAST results are available for this feature:
BLAST of Protocadherin vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PCDH14.354e-7229.95protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655][more]
PCDH11.227e-7129.95protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655][more]
PCDH95.351e-7029.85protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661][more]
PCDH92.048e-6929.85protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661][more]
PCDH92.081e-6929.85protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661][more]
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BLAST of Protocadherin vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
fmi-17.371e-4128.47FlaMIngo (Cadherin plus 7TM domain) homolog [Sour... [more]
cdh-15.277e-3625.00CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4... [more]
fmi-16.988e-3028.01FlaMIngo (Cadherin plus 7TM domain) homolog [Sour... [more]
cdh-33.507e-2826.91Cadherin-3 [Source:UniProtKB/Swiss-Prot;Acc:P3461... [more]
hmr-18.423e-2825.18Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Pr... [more]
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BLAST of Protocadherin vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
stan1.292e-4829.31gene:FBgn0024836 transcript:FBtr0303223[more]
stan1.292e-4829.31gene:FBgn0024836 transcript:FBtr0088214[more]
stan1.372e-4829.31gene:FBgn0024836 transcript:FBtr0304899[more]
stan1.372e-4829.31gene:FBgn0024836 transcript:FBtr0300578[more]
stan1.482e-4829.31gene:FBgn0024836 transcript:FBtr0304900[more]
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BLAST of Protocadherin vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh91.620e-7029.45protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1... [more]
CR847522.12.077e-7029.60pep chromosome:GRCz11:CHR_ALT_CTG6_1_1:4874141:487... [more]
pcdh93.563e-7029.45protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1... [more]
pcdh93.563e-7029.45protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1... [more]
CT030123.13.110e-6828.40protocadherin 1b [Source:NCBI gene;Acc:572016][more]
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BLAST of Protocadherin vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh177.038e-7529.94protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
pcdh171.040e-7430.11protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
pcdh172.001e-7430.11protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
pcdh172.303e-7429.91protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
pcdh172.478e-7430.09protocadherin 17 [Source:Xenbase;Acc:XB-GENE-48022... [more]
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BLAST of Protocadherin vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Pcdh15.627e-7229.63protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692][more]
Pcdh15.627e-7229.63protocadherin 1 [Source:MGI Symbol;Acc:MGI:104692][more]
Pcdh93.482e-7029.97protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801... [more]
Pcdh97.814e-6929.97protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801... [more]
Pcdh97.814e-6929.97protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801... [more]
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BLAST of Protocadherin vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q08174|PCDH1_HUMAN2.091e-7129.95Protocadherin-1 OS=Homo sapiens OX=9606 GN=PCDH1 P... [more]
sp|Q9HC56|PCDH9_HUMAN1.468e-6829.85Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 P... [more]
sp|Q6KEQ9|PC11X_PIG3.439e-6429.47Protocadherin-11 X-linked OS=Sus scrofa OX=9823 GN... [more]
sp|Q71M42|PC11X_PANTR1.735e-6328.90Protocadherin-11 X-linked OS=Pan troglodytes OX=95... [more]
sp|Q6WYY1|PC11X_PANPA1.813e-6328.90Protocadherin-11 X-linked OS=Pan paniscus OX=9597 ... [more]
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BLAST of Protocadherin vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4S2LI765.442e-12433.19Uncharacterized protein OS=Opisthorchis felineus O... [more]
A0A074ZL439.591e-12433.09Uncharacterized protein OS=Opisthorchis viverrini ... [more]
A0A4E0RRX52.459e-12334.25Protocadherin-1 OS=Fasciola hepatica OX=6192 GN=D9... [more]
H2KQG95.246e-12333.51Protocadherin-1 OS=Clonorchis sinensis OX=79923 GN... [more]
A0A4Z2DTZ91.179e-12232.69Protocadherin-1 isoform 2 OS=Schistosoma japonicum... [more]
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BLAST of Protocadherin vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh1a1.864e-7229.72protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-... [more]
pcdh1a4.909e-7229.49protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-... [more]
pcdh1b3.955e-7129.20protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-... [more]
pcdh95.034e-6628.57protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1... [more]
pcdh96.692e-6628.57protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1... [more]
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BLAST of Protocadherin vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh114.191e-5628.02protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-... [more]
ENSPMAT00000010725.19.221e-5526.28pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 ... [more]
ENSPMAT00000008517.16.737e-5328.95pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 ... [more]
ENSPMAT00000004042.14.541e-4325.66pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 g... [more]
ENSPMAT00000004043.15.015e-4325.66pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 g... [more]
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BLAST of Protocadherin vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protocadherin vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO404707.527e-6231.32Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO461899.775e-5627.24Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO354121.409e-5428.55Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO333593.457e-4826.27Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO392302.459e-4629.94Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Protocadherin vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pcdh1a1.094e-6930.47protocadherin-1 [Source:NCBI gene;Acc:101157079][more]
pcdh1a1.765e-6930.47protocadherin-1 [Source:NCBI gene;Acc:101157079][more]
pcdh1b8.793e-6929.21protocadherin-1 [Source:NCBI gene;Acc:101174755][more]
pcdh1b2.538e-6829.21protocadherin-1 [Source:NCBI gene;Acc:101174755][more]
pcdh91.168e-6729.22protocadherin 9 [Source:NCBI gene;Acc:101156238][more]
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BLAST of Protocadherin vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000033639.10.000e+099.91SMESG000033639.1[more]
SMESG000033639.10.000e+0100.00SMESG000033639.1[more]
SMESG000079318.11.417e-14736.19SMESG000079318.1[more]
SMESG000051413.11.699e-14535.09SMESG000051413.1[more]
SMESG000051413.12.085e-14535.21SMESG000051413.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30032108 ID=SMED30032108|Name=Protocadherin|organism=Schmidtea mediterranea sexual|type=transcript|length=3533bp
GTAGAATTAAATTTTTGGAATTTCCAGCATTTCTATATGTTTCAGTGTCT
ATTGAATTCTTTAAAATTTTAGAAATTATTGGAAATGAAGATTGATTTTT
GCATAATTTTCTTGTTTTATCTTTGCTATCAAGGAAGCTGTCAAACTGTA
ACTTTCAAAATAATGGAAGAAAGTCCAATCGACATGGTAATTGGGAATAT
TGTACATCTTCATCCTTCATTTAATAAAGCGTCATATTTTATTAAAAGTC
CATTTTTAAAACTTTCCGATAAAGGAGATCTCATGCTTAGTAGTCGGATT
GATTTGGAAACCATTTGTGCTCAACATGAAATGTGCTGTGAAGAAGTCGA
ATGCATTCTCAAAACGACAATAATGGCCAAAGACAAATCCAGCGATCAGT
CGGAATCCATAAATATACATGTCAGTGTTTCAGATAAAAACGACAACTGG
CCAAAGTTTGTCAAACCTAAACAAACCGTAAACGTCGCGGAAAATGAGCC
AATCGGATTTTATTTATATTTAGATCGAGCGCTGGACGCAGATGCAACTT
CTGCAAATAGAGTCCATCAGTATATCTTCAAAGAACCTACTGGGACCTTC
AACCTTGACCAGAGTCGGTTGCCTTCTATTGGGTTAATTGTGAAAAAGCC
ATTAGATTACGAAGTGAAATCCCAGTATTTCGCAACTCTTGAAGCCTGTG
ACACAAATAAACAATGTAATACTCAAGCATTGGAAATCCACGTCCTCGAC
CAAAATGACAATTATCCATCATTTTCACAACAGGAGTATCAAATCGAAAT
TCTCGAAAACTTCCCAGTCGGTCAACAAATCATCGCAGTCGAAGCAATTG
ACAAAGATTCAGACTTGTTCAACAAAATTATATATGGGTTCCACGAACTC
TCTGATAACAACATACGAAACACATTCATAATCACAGAAAATACCGGTTC
CATTAAACTGCAAAAGAAACTCTCGGCAAAAGTTCGTCAGAAATACAAAT
TCAAAGTATTCGCTGCCGACAAAATGGCCATGGCCTTTCACAAAGCAGTA
GCAAACATTTTTATCAAAGTCAAAGATTTGAACGACAACAGTCCAAAGAT
CACTTCACTTAGTGGAAACTCAAAAATCGAAATCAACGAAACTGATCCAC
CAAGAGAATTGTTTACGTTACAAGTGACGGATGACGATATTGGAGTAAAC
GCAAATGTTTCCTGTCAGTTATTGCAACAATACATCAATGACTTCCGGTT
AGATGCCGTCGGAAATGAAATTTATTCTCTATCGTCAATCCGATCATTTG
ATTACGAAAATGAAAGAGAAATCAAAGCAGAAATCGAATGTTATGATCAC
GGCAGTCCAAGAAATGTTGCCCATAAATCTTTGAACGTTCATGTCAAAGA
TATAAATGAATTTGCTCCAAGATTTGAAAAGGATTTCCAAAAGTTAAAAC
TACTTGAAAATCGTGAACAAGGTCACAATATTCTTCAGGTAAGCGCATCT
GACAGAGATGGAAGCGCCGTTTTAAAGTATTCCTTTACAGGAGAACCGAA
TGATTATTTTACGATAGATCCTCATACTGGTCAGATTAAATCAGGAATCC
GAAGATTAGACAGAGAAATGGTCGAACGAATCGAAATTAATATTATTGTA
ACAGATGCAATAGAGAATCCCAAAACAGGACAATGCACGGTTATTATCGA
AGTGTTGGATGAAAATGACAACCCTCCGACATTCATTGACATTTCTGGAG
TTTTTAATATCTCTGAAAACCTCTCAAGCTATTCAAAGGTCCGAGGTCGA
ATTGCGGCTACTGATAAAGACAAAGACGAAATAAACAATAAAGTTCTTTT
TCAATTGCAGCATACTTTTGATTCACAAAACCGAAGAATATCAGAACCTA
TTTTTAAAGTAACTGAAAGTGGTGAAATTCTTACGGTAAAAAAACTGGAT
AGGGAGATAAATCATAACTATACTGTCGAAATTCGAGCATTTGATACTGG
ACTACCGATGCTTTCAGCGCACAAGAACTTCACAATTTATGTAGAAGACC
AAAATGATAATGACCCAGATTGGGTTACCCCTCTTTCATCCCATGGTGGA
ATTCATACTGTAAATATAACTGCTAATTCTCCGCCGGGATATTTGATAAT
TAAGCTCCAAGCAACCGACCCGGATTACGGTGAAAATAGCAATGTTACAT
ATTCAGTGATGAACAATAACAAATTGTTGTTCATTTTAAATCAAGTCACT
GGGGAGTTGAGAGTTGCTCGATTGCTTCCTATAGGCCAATTTCAACTGTT
TCTTCGCGCCTCTGACAACGGTCGGCCTCCAAGACACAACGAAACGAGTC
TTTTTATTTTTATAAATGGTGACGAGGTCGCTACTTTGAATATGAGCATA
ATTATTGTGTTGATTGGAATCACCGGTTTTATTTCAATCTTTCTTATAAT
TGCCATCATTTGTGTTCGAAGAAGACCTCGCTACAACAATACCGATACAA
TGGGATCTCAGAATAGCTTTGAGCCTCCCAAAACAAGTAATCATCATGTC
ACGGGAACTTGGGGACATCACACCGATGAAGGCTCGTATTATCCTTCAGG
GAACTTTCTGTCTGACAACACAAGTGTGCTTTATTTTCCAAATGAAATCG
ACTCATCCGTTCCAATGAACACGTTTGTATCTAAATCAAATGTTCCCCAT
CCGCTGATAACCTATCAAAACATTGATAATTGCTATTACCCAAATATGTC
TAACTCCTCTGGTTACTTAAGAAATTGTTCCACTTTGGGAAATTCGCAAA
CCAACATAGTGCGAATTCCAGCGAATTCAAATTGCTGTGACATGACGTCT
GCTGGATCTGTAGGACGATTTAACGAAATGGATGACGACAGTGCCGATTC
AGGGAAGGGTGGCAGCGAAGATGATAATGGTCTTCATCAGATGCCTTTAT
TGGGTCCCCACAATAGTTTTGAAAGCAATGGAAAAAGTAGGCTATACACG
ACAATGCCATATCAAAATCGGACACTGAATAACGGTCGAATGGGATCTCG
AGCTAGAGGCGCTTTGCCTCATACAATCAACCATTGCCCTTGTTACATTC
TTCCTGAAGATTCTGTTGTTCAGTCTATTCAGAATAATTCCAATTGTCAT
TCTTCAAACATTCGATCAAATTCCGTTGAAAATTTGCATCCAATGTTTGA
TAAATGCATCAACTCTCAGCCATTTCCCAATTCTAACATTCCACAAGATT
ATCAAATCTCTAAATCGCCAACAACAAACAATGAATCCTTGCCTGTCACA
TCTGCCATAGAGTCGAATCGTGTTTAGTCTCCATGTCATTTTATTCGGAA
TATTTTCAGCGGACTAGATGATTATAAAGAAAAATTTTGATAGAAAGAGA
ATTCAAAAAAAAATAGATGTTAATGTATAAAATTGAATTCAGATTTGAAA
ACATAAATTGCAGATATTGTGTGGTAACGTCAATGAATATACGTATGGTT
CATTATGTGCTTTTCTAGTCTAATGAAATGTAG
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protein sequence of SMED30032108-orf-1

>SMED30032108-orf-1 ID=SMED30032108-orf-1|Name=SMED30032108-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1081bp
MKIDFCIIFLFYLCYQGSCQTVTFKIMEESPIDMVIGNIVHLHPSFNKAS
YFIKSPFLKLSDKGDLMLSSRIDLETICAQHEMCCEEVECILKTTIMAKD
KSSDQSESINIHVSVSDKNDNWPKFVKPKQTVNVAENEPIGFYLYLDRAL
DADATSANRVHQYIFKEPTGTFNLDQSRLPSIGLIVKKPLDYEVKSQYFA
TLEACDTNKQCNTQALEIHVLDQNDNYPSFSQQEYQIEILENFPVGQQII
AVEAIDKDSDLFNKIIYGFHELSDNNIRNTFIITENTGSIKLQKKLSAKV
RQKYKFKVFAADKMAMAFHKAVANIFIKVKDLNDNSPKITSLSGNSKIEI
NETDPPRELFTLQVTDDDIGVNANVSCQLLQQYINDFRLDAVGNEIYSLS
SIRSFDYENEREIKAEIECYDHGSPRNVAHKSLNVHVKDINEFAPRFEKD
FQKLKLLENREQGHNILQVSASDRDGSAVLKYSFTGEPNDYFTIDPHTGQ
IKSGIRRLDREMVERIEINIIVTDAIENPKTGQCTVIIEVLDENDNPPTF
IDISGVFNISENLSSYSKVRGRIAATDKDKDEINNKVLFQLQHTFDSQNR
RISEPIFKVTESGEILTVKKLDREINHNYTVEIRAFDTGLPMLSAHKNFT
IYVEDQNDNDPDWVTPLSSHGGIHTVNITANSPPGYLIIKLQATDPDYGE
NSNVTYSVMNNNKLLFILNQVTGELRVARLLPIGQFQLFLRASDNGRPPR
HNETSLFIFINGDEVATLNMSIIIVLIGITGFISIFLIIAIICVRRRPRY
NNTDTMGSQNSFEPPKTSNHHVTGTWGHHTDEGSYYPSGNFLSDNTSVLY
FPNEIDSSVPMNTFVSKSNVPHPLITYQNIDNCYYPNMSNSSGYLRNCST
LGNSQTNIVRIPANSNCCDMTSAGSVGRFNEMDDDSADSGKGGSEDDNGL
HQMPLLGPHNSFESNGKSRLYTTMPYQNRTLNNGRMGSRARGALPHTINH
CPCYILPEDSVVQSIQNNSNCHSSNIRSNSVENLHPMFDKCINSQPFPNS
NIPQDYQISKSPTTNNESLPVTSAIESNRV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000418head
Vocabulary: INTERPRO
TermDefinition
IPR030711Protocadherin-8
IPR002126Cadherin-like_dom
IPR020894Cadherin_CS
IPR015919Cadherin-like_sf
Vocabulary: molecular function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: biological process
TermDefinition
GO:0007156homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007155cell adhesion
Vocabulary: cellular component
TermDefinition
GO:0016020membrane
GO:0005886plasma membrane
GO:0016021integral component of membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002126Cadherin-likePRINTSPR00205CADHERINcoord: 55..74
score: 25.63
coord: 611..637
score: 27.12
coord: 529..548
score: 43.2
coord: 230..259
score: 34.15
coord: 645..662
score: 35.99
IPR002126Cadherin-likeSMARTSM00112CA_2coord: 362..445
e-value: 8.7E-15
score: 65.1
coord: 469..548
e-value: 4.7E-23
score: 92.6
coord: 147..228
e-value: 1.7E-7
score: 40.9
coord: 39..123
e-value: 0.87
score: 4.4
coord: 691..766
e-value: 4.4E-5
score: 32.9
coord: 573..661
e-value: 3.9E-16
score: 69.6
coord: 252..337
e-value: 3.3E-11
score: 53.2
IPR002126Cadherin-likePFAMPF00028Cadherincoord: 676..759
e-value: 2.0E-11
score: 44.2
coord: 131..220
e-value: 5.0E-8
score: 33.3
coord: 348..437
e-value: 8.6E-9
score: 35.7
coord: 235..313
e-value: 8.4E-11
score: 42.2
coord: 456..541
e-value: 1.9E-14
score: 53.8
coord: 557..653
e-value: 3.2E-8
score: 33.9
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 661..765
e-value: 3.4E-16
score: 61.6
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 21..117
e-value: 1.9E-6
score: 29.9
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 546..660
e-value: 1.8E-19
score: 72.2
coord: 443..545
e-value: 6.5E-23
score: 83.4
coord: 119..225
e-value: 8.5E-18
score: 66.9
coord: 226..337
e-value: 2.2E-23
score: 84.9
NoneNo IPR availableGENE3DG3DSA:2.60.40.60coord: 338..442
e-value: 6.1E-17
score: 64.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1060..1080
NoneNo IPR availablePANTHERPTHR24028FAMILY NOT NAMEDcoord: 16..591
NoneNo IPR availablePANTHERPTHR24028FAMILY NOT NAMEDcoord: 399..662
NoneNo IPR availablePANTHERPTHR24028FAMILY NOT NAMEDcoord: 508..853
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 559..663
score: 20.459
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 342..447
score: 12.654
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 231..339
score: 20.284
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 670..760
score: 13.619
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 448..550
score: 21.577
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 126..230
score: 17.302
NoneNo IPR availablePROSITEPS50268CADHERIN_2coord: 22..125
score: 9.629
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 23..121
e-value: 2.7527E-4
score: 39.219
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 131..226
e-value: 6.66465E-13
score: 63.4865
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 556..659
e-value: 5.42263E-18
score: 78.1241
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 348..442
e-value: 6.34792E-13
score: 63.8717
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 234..335
e-value: 1.14021E-19
score: 82.7465
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 675..760
e-value: 1.06516E-19
score: 83.1317
NoneNo IPR availableCDDcd11304Cadherin_repeatcoord: 454..546
e-value: 1.48548E-23
score: 93.9173
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.694
NoneNo IPR availableTMHMMTMhelixcoord: 772..794
IPR030711Protocadherin-8PANTHERPTHR24028:SF46PROTOCADHERIN-8coord: 508..853
IPR030711Protocadherin-8PANTHERPTHR24028:SF46PROTOCADHERIN-8coord: 16..591
coord: 399..662
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 538..548
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 327..337
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 218..228
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 651..661
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 113..123
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 119..222
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 538..664
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 218..341
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 332..439
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 657..760
IPR015919Cadherin-like superfamilySUPERFAMILYSSF49313Cadherin-likecoord: 435..562