Transcription initiation factor TFIID subunit 5

Overview


Name	Transcription initiation factor TFIID subunit 5
Smed ID	SMED30032062
Length (bp)	1015

Neoblast Clusters

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Embryonic Expression

Davies et. al., 2017

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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30032062

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
X1 cell	SMED30032062	SMESG000013017.1	SmedASXL_013137	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X2 cell	SMED30032062	SMESG000013017.1	SmedASXL_013137	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
Smed sexual biotype	SMED30032062	SMESG000013017.1	Contig24106	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30032062	SMESG000013017.1	Contig24106	uc_Smed_v2	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Human
Match: TAF5 (TATA-box binding protein associated factor 5 [Source:HGNC Symbol;Acc:HGNC:11539])

HSP 1 Score: 136.346 bits (342), Expect = 7.158e-35
Identity = 68/135 (50.37%), Postives = 90/135 (66.67%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L GH+G VY  ++S DRN +L++S DGTVRLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     V C +FH N NYVA+GS DR VRL+D+ +G  VR FTGHK
Sbjct:  537 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 669

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Human
Match: TAF5L (TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304])

HSP 1 Score: 111.694 bits (278), Expect = 1.436e-26
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH G VY   +  D + +L+ S D ++R W + ++TN   YQ    P+W +D +P Y  Y A+G +DR   L++ D   PLR + G     V CVKFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP-YSLYFASGSHDRTARLWSFDRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 468

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Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH G VY   +  D + +L+ S D ++R W + ++TN   YQ    P+W +D +P Y  Y A+G +DR   L++ D   PLR + G     V CVKFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP-YSLYFASGSHDRTARLWSFDRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 468

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Human
Match: WDR5B (WD repeat domain 5B [Source:HGNC Symbol;Acc:HGNC:17826])

HSP 1 Score: 65.855 bits (159), Expect = 1.593e-11
Identity = 40/135 (29.63%), Postives = 70/135 (51.85%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K LKGH+  V+   ++   N +++ S D TV++W + T   L       +P+ AV F    G  + +G  D    ++ A + + L+  V D   PV+ VKF  N  Y+ + + D  ++L+D   G  ++++TGHK
Sbjct:  119 KTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFN-CSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHK 252

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Human
Match: KATNB1 (katanin regulatory subunit B1 [Source:HGNC Symbol;Acc:HGNC:6217])

HSP 1 Score: 62.3882 bits (150), Expect = 7.587e-11
Identity = 38/141 (26.95%), Postives = 68/141 (48.23%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH--KVRLFEF 743
            L GH   V  +  +T    ++  S  G++R+W +     L         + ++DF P YG ++A+G  D  + L+       + R+ G     V C++F  +  ++AS + D  V+L+D+ +G M+  F GH   V + EF
Sbjct:   59 LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197

HSP 2 Score: 48.1358 bits (113), Expect = 5.423e-6
Identity = 32/118 (27.12%), Postives = 57/118 (48.31%), Query Frame = 3

Query:  309 SAVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTD 662
            + + + L GH   +  + +      V + S D  ++LW +     + +Y+   + +  + F+P  G +LA+  +D  V L+     K +  F G   GPV  V+FH N   +ASGS+D
Sbjct:   95 AKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSP-DGKWLASAADDHTVKLWDLTAGKMMSEFPGHT-GPVNVVEFHPNEYLLASGSSD 210

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Celegans
Match: taf-5 (TAF (TBP-associated transcription factor) family [Source:UniProtKB/TrEMBL;Acc:G5EF68])

HSP 1 Score: 104.375 bits (259), Expect = 2.022e-24
Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 3

Query:  333 GHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLF 737
            GH G V+ + +S DR  +++++ D TVRLW M T  N   Y+     +W   F    G+Y AT   D+   +++ D + PLR F  D YG V C+ +H N NY+A GS DR VR++D+ SG  VR F+GHK  + 
Sbjct:  392 GHGGPVFSVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRTPA-VVWQAQFCS-RGYYFATASADKTAAMWSTDRMHPLRIF-ADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSGTRVRIFSGHKASII 523

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Query:  333 GHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLF 737
            GH G V+ + +S DR  +++++ D TVRLW M T  N   Y+     +W   F    G+Y AT   D+   +++ D + PLR F  D YG V C+ +H N NY+A GS DR VR++D+ SG  VR F+GHK  + 
Sbjct:  392 GHGGPVFSVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRTPA-VVWQAQFCS-RGYYFATASADKTAAMWSTDRMHPLRIF-ADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSGTRVRIFSGHKASII 523

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Query:  333 GHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLF 737
            GH G V+ + +S DR  +++++ D TVRLW M T  N   Y+     +W   F    G+Y AT   D+   +++ D + PLR F  D YG V C+ +H N NY+A GS DR VR++D+ SG  VR F+GHK  + 
Sbjct:  392 GHGGPVFSVNFSPDRRLLISSAGDRTVRLWSMETQRNAVIYRTPA-VVWQAQFCS-RGYYFATASADKTAAMWSTDRMHPLRIF-ADPYGDVGCIDYHPNCNYIAGGSDDRYVRVWDVCSGTRVRIFSGHKASII 523

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Celegans
Match: wdr-5.1 (WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963])

HSP 1 Score: 63.1586 bits (152), Expect = 5.734e-11
Identity = 40/139 (28.78%), Postives = 70/139 (50.36%), Query Frame = 3

Query:  309 SAVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            S + K LKGH   V+   ++   + V++ S D +VR+W + T   +       +P+ AV F    G  +A+G  D  V ++   N + ++  V D   PV  VKF  N  Y+ + + D  ++L+D   G  ++ +TGH+
Sbjct:  161 SRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHE 298

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Query:  309 SAVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            S + K LKGH   V+   ++   + V++ S D +VR+W + T   +       +P+ AV F    G  +A+G  D  V ++   N + ++  V D   PV  VKF  N  Y+ + + D  ++L+D   G  ++ +TGH+
Sbjct:  161 SRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHE 298

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Fly
Match: Taf5 (gene:FBgn0010356 transcript:FBtr0088240)

HSP 1 Score: 118.242 bits (295), Expect = 4.599e-29
Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            V + L GH G VY  A++ + N +L+ S D T+RLW ++TW+ +  Y+    P+W V FAP +G+Y  +   D+   L+A D+ + LR FVG     V CV+FH N NYVA+GS+DR VRL+D  +G  VR  TGHK
Sbjct:  442 VTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAP-HGYYFVSCSYDKTARLWATDSNQALRVFVGHL-SDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHK 576

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Fly
Match: can (gene:FBgn0011569 transcript:FBtr0076299)

HSP 1 Score: 91.6633 bits (226), Expect = 5.748e-20
Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRL 734
            L GH G VY  +++ +   ++T S D +VRLWC+++W+ +  +     P+  V FAP  G+Y AT  +D    ++  DN KP R   G       C+ FH N +Y+A+GS D  VR++DI     VR F GHK R+
Sbjct:  622 LYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAP-RGYYFATASDDCTARVWMQDNTKPARILQGHLAELGVCL-FHPNRHYMATGSADCTVRIWDIVKAVQVRIFRGHKSRI 755

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Fly
Match: wda (gene:FBgn0039067 transcript:FBtr0084387)

HSP 1 Score: 79.337 bits (194), Expect = 5.683e-16
Identity = 46/130 (35.38%), Postives = 67/130 (51.54%), Query Frame = 3

Query:  324 ELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSF 713
            +L+GH  GV D+ +S     + + S D T+R W        A Y+    P+W +D +PV G Y+ TG  D    L++ +    L  + G     V CV FH N NY+A+GS D  VRL+   SG ++R F
Sbjct:  492 QLRGHTKGVTDVRFSAHYPLMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPV-GQYVVTGSKDLSARLWSLEKEHALIIYAGHTQD-VECVAFHPNGNYIATGSADHSVRLWCATSGKLMRVF 619

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Fly
Match: CG3909 (gene:FBgn0027524 transcript:FBtr0082172)

HSP 1 Score: 66.2402 bits (160), Expect = 6.092e-12
Identity = 38/135 (28.15%), Postives = 69/135 (51.11%), Query Frame = 3

Query:  324 ELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKV 728
            +LKGHA GV  +A S+D   + ++S D T+ LW   +         G   LW V F+P    Y+ +G ND  +++Y+ +  K  +            + +  +  Y+ASG+ D ++ +FD+ +G +V++  GH +
Sbjct:   80 KLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPC-NKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAM 213

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Fly
Match: Gbeta5 (gene:FBgn0030011 transcript:FBtr0071189)

HSP 1 Score: 65.0846 bits (157), Expect = 1.959e-11
Identity = 40/137 (29.20%), Postives = 68/137 (49.64%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLY---AADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            K LKGH   V    WS D+  ++++S DG + +W   T             + A  +AP  G+++A GG D  V +Y   + + +   +R VG     ++C  + N+   + +GS D    L+D+ SG +++SF GH
Sbjct:   64 KVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAP-SGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGH 199

HSP 2 Score: 48.9062 bits (115), Expect = 3.794e-6
Identity = 34/118 (28.81%), Postives = 54/118 (45.76%), Query Frame = 3

Query:  378 NQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAP-VYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKV 728
             Q+LT S D T  LW + +   L  +      + A+D AP   G+   +G  DR   ++   +   ++ F G     V  VKFH   + +A+GS D   RL+D+R+   V  F    +
Sbjct:  171 QQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGH-QSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESI 287

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Zebrafish
Match: taf5 (TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180])

HSP 1 Score: 140.584 bits (353), Expect = 1.735e-36
Identity = 68/139 (48.92%), Postives = 95/139 (68.35%), Query Frame = 3

Query:  309 SAVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            S+  K L GH+G VY +++S DRN +L++S DGT+RLW + T+T L  Y+    P+W   F+P +G+Y  +GG+DR   L+A D+ +PLR F G     VTC +FH N NYVA+GS+DR VRL+D+ +G  VR FTGHK
Sbjct:  489 SSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSP-FGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-ADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHK 625

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Zebrafish
Match: taf5l (TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987])

HSP 1 Score: 112.079 bits (279), Expect = 6.856e-27
Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH+G VY  A+ TD + +L+ S D TVR W + ++TN   Y+    P+W VD +P    Y +T  +DR   L++     PLR + G     V CVKFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  348 KTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPC-SLYFSTASHDRTARLWSFARTYPLRLYAGH-LSDVDCVKFHPNSNYIATGSTDKTVRLWSTQQGASVRLFTGHR 480

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Zebrafish
Match: daw1 (dynein assembly factor with WDR repeat domains 1 [Source:NCBI gene;Acc:556760])

HSP 1 Score: 63.1586 bits (152), Expect = 1.170e-10
Identity = 36/136 (26.47%), Postives = 67/136 (49.26%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            +++ L+ H   + ++A++   +  +T S D T ++W   +   L   +     ++A+ F   YG  +ATG  D+   L++A+  K    F G     + C+ F+     VA+GS D   +L+D+ SG  V +  GH
Sbjct:   84 LFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGH-TAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGH 218

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Zebrafish
Match: katnb1 (katanin p80 (WD repeat containing) subunit B 1 [Source:NCBI gene;Acc:406291])

HSP 1 Score: 62.003 bits (149), Expect = 1.197e-10
Identity = 39/132 (29.55%), Postives = 65/132 (49.24%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            L GH   V  I +++   +V+  S  G++RLW +     L         + ++DF P+ G YLA+G  D  + L+       + R+ G     V C+ F  +  ++AS S D  V+L+D+ +G M+  FT H
Sbjct:   59 LTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPM-GEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQA-VRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSH 188

HSP 2 Score: 52.373 bits (124), Expect = 2.219e-7
Identity = 35/136 (25.74%), Postives = 63/136 (46.32%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            + + L GH   +  + +      + + S D  ++LW +     + +Y+   + +  + F+P  G +LA+  +D  V L+     K +  F       V  V+FH N   +ASGS DR V+L+D+    M+ S  G 
Sbjct:   97 ILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSP-DGKWLASASDDSTVKLWDLIAGKMITEFTSHT-SAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGE 230

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Zebrafish
Match: daw1 (dynein assembly factor with WDR repeat domains 1 [Source:NCBI gene;Acc:556760])

HSP 1 Score: 63.1586 bits (152), Expect = 1.284e-10
Identity = 36/143 (25.17%), Postives = 68/143 (47.55%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLFEF 743
            +++ L+ H   + ++A++   +  +T S D T ++W   +   L   +     ++A+ F   YG  +ATG  D+   L++A+  K    F G     + C+ F+     VA+GS D   +L+D+ SG  V +  GH   +   
Sbjct:   84 LFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGH-TAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISL 225

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Xenopus
Match: myadm (myeloid-associated differentiation marker [Source:Xenbase;Acc:XB-GENE-966240])

HSP 1 Score: 139.428 bits (350), Expect = 5.404e-36
Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 3

Query:  309 SAVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            S+  K L GH+G VY  ++S DRN +L++S DGT+RLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     V C +FH N NY+A+GSTDR VRL+D+ +G  VR FTGHK
Sbjct:  504 SSEMKVLYGHSGPVYATSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVAYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-ADVICTRFHPNSNYIATGSTDRTVRLWDVLNGNCVRIFTGHK 640

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Xenopus
Match: myadm (myeloid-associated differentiation marker [Source:Xenbase;Acc:XB-GENE-966240])

HSP 1 Score: 139.428 bits (350), Expect = 5.736e-36
Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 3

Query:  309 SAVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            S+  K L GH+G VY  ++S DRN +L++S DGT+RLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     V C +FH N NY+A+GSTDR VRL+D+ +G  VR FTGHK
Sbjct:  510 SSEMKVLYGHSGPVYATSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVAYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-ADVICTRFHPNSNYIATGSTDRTVRLWDVLNGNCVRIFTGHK 646

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Xenopus
Match: myadm (myeloid-associated differentiation marker [Source:Xenbase;Acc:XB-GENE-966240])

HSP 1 Score: 139.043 bits (349), Expect = 6.373e-36
Identity = 68/139 (48.92%), Postives = 93/139 (66.91%), Query Frame = 3

Query:  309 SAVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            S+  K L GH+G VY  ++S DRN +L++S DGT+RLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     V C +FH N NY+A+GSTDR VRL+D+ +G  VR FTGHK
Sbjct:  483 SSEMKVLYGHSGPVYATSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVAYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-ADVICTRFHPNSNYIATGSTDRTVRLWDVLNGNCVRIFTGHK 619

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Xenopus
Match: rxfp3 (relaxin family peptide receptor 3 [Source:Xenbase;Acc:XB-GENE-478939])

HSP 1 Score: 105.531 bits (262), Expect = 1.917e-24
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH+G VY   + +D + +L+ S D ++R W +  +TN   YQ    P+W +D +P    + A+  +DR   L+  D   PLR + G     V C+KFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  335 KILRGHSGPVYRTCFLSDSSGLLSCSEDTSIRYWNLENFTNTVLYQGHAHPVWDLDVSPC-SLFFASASHDRTGRLWCFDRTFPLRIYAGH-LSDVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHR 467

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Xenopus
Match: rxfp3 (relaxin family peptide receptor 3 [Source:Xenbase;Acc:XB-GENE-478939])

HSP 1 Score: 105.145 bits (261), Expect = 2.054e-24
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH+G VY   + +D + +L+ S D ++R W +  +TN   YQ    P+W +D +P    + A+  +DR   L+  D   PLR + G     V C+KFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  300 KILRGHSGPVYRTCFLSDSSGLLSCSEDTSIRYWNLENFTNTVLYQGHAHPVWDLDVSPC-SLFFASASHDRTGRLWCFDRTFPLRIYAGH-LSDVDCIKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHR 432

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Mouse
Match: Taf5 (TATA-box binding protein associated factor 5 [Source:MGI Symbol;Acc:MGI:2442144])

HSP 1 Score: 136.346 bits (342), Expect = 5.361e-35
Identity = 68/135 (50.37%), Postives = 90/135 (66.67%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L GH+G VY  ++S DRN +L++S DGTVRLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     V C +FH N NYVA+GS DR VRL+D+ +G  VR FTGHK
Sbjct:  538 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 670

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Mouse
Match: Taf5l (TATA-box binding protein associated factor 5 like [Source:MGI Symbol;Acc:MGI:1919039])

HSP 1 Score: 111.309 bits (277), Expect = 1.240e-26
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH G VY   +  D + +L+ S D ++R W + ++TN   YQ    P+W VD +P +  Y A+G +DR   L++ D   PLR + G     V CVKFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISP-FSLYFASGSHDRTARLWSFDRTYPLRIYAGH-LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 468

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Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH G VY   +  D + +L+ S D ++R W + ++TN   YQ    P+W VD +P +  Y A+G +DR   L++ D   PLR + G     V CVKFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISP-FSLYFASGSHDRTARLWSFDRTYPLRIYAGH-LADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 468

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Mouse
Match: Wdr5b (WD repeat domain 5B [Source:MGI Symbol;Acc:MGI:1916794])

HSP 1 Score: 64.6994 bits (156), Expect = 2.935e-11
Identity = 37/131 (28.24%), Postives = 70/131 (53.44%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSF 713
            K L GH+  + D+AWS+D +++++AS D T+++W M +   L   +   + ++  DF P   + + +G  D  V ++     K L+        P++ V F+ N + + SGS D + R++D  SG  +R+ 
Sbjct:   75 KTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPP-SNLIVSGSFDESVKIWEVKTGKCLKTLSAH-SDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL 203

HSP 2 Score: 63.929 bits (154), Expect = 5.347e-11
Identity = 38/135 (28.15%), Postives = 70/135 (51.85%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K LKGH+  V+   ++   N +++ S D +V++W + T   L       +P+ AV+F    G  + +G  D    ++ A + + LR    +   PV+ VKF  N  Y+ + + D  ++L+D   G  ++++TGHK
Sbjct:  117 KTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFN-CNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHK 250

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Mouse
Match: Daw1 (dynein assembly factor with WDR repeat domains 1 [Source:MGI Symbol;Acc:MGI:1923089])

HSP 1 Score: 63.929 bits (154), Expect = 7.545e-11
Identity = 38/143 (26.57%), Postives = 69/143 (48.25%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLFEF 743
            ++K L+ H   + ++A +   +  +T S D T ++W   +   L   +     ++A+ F   YG  +ATG  D+   L++A+  K    F G     + C+ F+     VA+GS D   +L+DI++G  V + TGH   +   
Sbjct:   84 LFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHT-AEIVCLSFNPQSTVVATGSMDTTAKLWDIQNGEEVVTLTGHLAEIISL 225

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BLAST of Transcription initiation factor TFIID subunit 5 vs. UniProt/SwissProt
Match: sp|Q15542|TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens OX=9606 GN=TAF5 PE=1 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 3.437e-34
Identity = 68/135 (50.37%), Postives = 90/135 (66.67%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L GH+G VY  ++S DRN +L++S DGTVRLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     V C +FH N NYVA+GS DR VRL+D+ +G  VR FTGHK
Sbjct:  537 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 669

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BLAST of Transcription initiation factor TFIID subunit 5 vs. UniProt/SwissProt
Match: sp|Q8C092|TAF5_MOUSE (Transcription initiation factor TFIID subunit 5 OS=Mus musculus OX=10090 GN=Taf5 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.122e-33
Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L GH+G VY  ++S DRN +L++S DGTVRLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     V C ++H N NYVA+GS DR VRL+D+ +G  VR FTGHK
Sbjct:  538 KILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-ADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHK 670

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BLAST of Transcription initiation factor TFIID subunit 5 vs. UniProt/SwissProt
Match: sp|P49846|TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster OX=7227 GN=Taf5 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.610e-28
Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            V + L GH G VY  A++ + N +L+ S D T+RLW ++TW+ +  Y+    P+W V FAP +G+Y  +   D+   L+A D+ + LR FVG     V CV+FH N NYVA+GS+DR VRL+D  +G  VR  TGHK
Sbjct:  442 VTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAP-HGYYFVSCSYDKTARLWATDSNQALRVFVGHL-SDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHK 576

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BLAST of Transcription initiation factor TFIID subunit 5 vs. UniProt/SwissProt
Match: sp|P38129|TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TAF5 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.011e-26
Identity = 59/134 (44.03%), Postives = 81/134 (60.45%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            K L GH+G VY  ++S D   +L+ S D TVRLW M T T L  Y+    P+W V F+P+ GHY AT  +D+   L++ D++ PLR F G     V CV FH N  YV +GS+D+  R++D+ +G  VR F GH
Sbjct:  519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL-GHYFATASHDQTARLWSCDHIYPLRIFAGHL-NDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGH 650

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BLAST of Transcription initiation factor TFIID subunit 5 vs. UniProt/SwissProt
Match: sp|O75529|TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens OX=9606 GN=TAF5L PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.897e-26
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH G VY   +  D + +L+ S D ++R W + ++TN   YQ    P+W +D +P Y  Y A+G +DR   L++ D   PLR + G     V CVKFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  336 KILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP-YSLYFASGSHDRTARLWSFDRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHR 468

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BLAST of Transcription initiation factor TFIID subunit 5 vs. TrEMBL
Match: A0A183WWH6 (WD_REPEATS_REGION domain-containing protein OS=Trichobilharzia regenti OX=157069 GN=TRE_LOCUS16478 PE=4 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 6.638e-36
Identity = 74/138 (53.62%), Postives = 93/138 (67.39%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTN-LAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLK-PLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKV 728
            ++L GH G V+ +A+S DR  + +ASSDGTVRLW  + W   L  ++D   P+W V +AP YGHY+ATGG DR  +LYA D+    LR FVG     VT V  H NVNY+A+GS DR VRLFD+RSG M R +TGHKV
Sbjct:  125 RDLLGHLGSVFGVAFSPDRQLIASASSDGTVRLWSTVIWGGALTAWRDHLLPVWCVTWAPTYGHYIATGGADRSAHLYATDHAPDALRVFVGH-KADVTSVCLHPNVNYLATGSADRTVRLFDVRSGKMTRVYTGHKV 261

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BLAST of Transcription initiation factor TFIID subunit 5 vs. TrEMBL
Match: A0A3Q2R363 (WD_REPEATS_REGION domain-containing protein OS=Fundulus heteroclitus OX=8078 PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.760e-35
Identity = 69/137 (50.36%), Postives = 94/137 (68.61%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVR 731
            K L GH G VY I++S DRN +L++S DG+VRLW ++T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     VTC +FH N NYVA+GS+DR +RL+D+ +G  VR  TGHKVR
Sbjct:   10 KCLYGHTGPVYGISFSPDRNYLLSSSEDGSVRLWSLLTFTCLVGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHHQPLRIFAGHL-ADVTCSRFHPNANYVATGSSDRAIRLWDVLTGNCVRILTGHKVR 144

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BLAST of Transcription initiation factor TFIID subunit 5 vs. TrEMBL
Match: T1L1N7 (Uncharacterized protein OS=Tetranychus urticae OX=32264 GN=107369469 PE=4 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.099e-35
Identity = 69/139 (49.64%), Postives = 98/139 (70.50%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLF 737
            K L GH+G VY +++S DRN +L+ S D T+RLW + TWTN+  Y+    P+W V F+P +G+Y AT G+DR   L+A D+ +PLR FVG  +  V C++FH N NYVASGSTDR +R++D+ +G  VR FTGHK +++
Sbjct:  368 KVLHGHSGPVYSLSFSPDRNLLLSCSEDSTIRLWSLQTWTNICCYKGHCFPVWDVVFSP-HGYYFATCGHDRTARLWATDSHQPLRFFVGH-FSDVDCIQFHPNSNYVASGSTDRTIRVWDVLTGQCVRYFTGHKAKIY 504

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BLAST of Transcription initiation factor TFIID subunit 5 vs. TrEMBL
Match: A0A564Z159 (WD_REPEATS_REGION domain-containing protein (Fragment) OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS11049 PE=4 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.343e-35
Identity = 73/138 (52.90%), Postives = 95/138 (68.84%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTN-LAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNL-KPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKV 728
            ++L GH   V+ +A+S D   V +AS+DGT+RLW  + W   L  +++   PLW VDFAPVYGHY+ATGG+DR   LYA D+  +PLR F G     VT V FH NVNY+A+GS DR VR+FD+RSG   R++TGHKV
Sbjct:  404 RDLIGHQDAVHGVAFSPDGQLVASASADGTLRLWSTIIWAGALCVWREHITPLWCVDFAPVYGHYMATGGSDRTARLYACDHAPQPLRIFSGH-KSDVTSVAFHPNVNYLATGSADRAVRIFDVRSGKCCRTYTGHKV 540

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BLAST of Transcription initiation factor TFIID subunit 5 vs. TrEMBL
Match: M7BPG8 (Protein RRP5 like protein OS=Chelonia mydas OX=8469 GN=UY3_05187 PE=4 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 8.562e-35
Identity = 68/135 (50.37%), Postives = 90/135 (66.67%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L GH+G VY  ++S DRN +L+ S DGTVRLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     VTC +FH N NY+A+GS DR VRL+D+ +G  VR FTGHK
Sbjct:  387 KILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGH-LADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHK 519

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Cavefish
Match: taf5 (TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:103038729])

HSP 1 Score: 137.117 bits (344), Expect = 1.701e-35
Identity = 65/135 (48.15%), Postives = 91/135 (67.41%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L GH+G VY +++S DRN +L++S DGT+RLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     +TC +FH N NYVA+GS DR +RL+D+ +G  VR  TGHK
Sbjct:  465 KILYGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVAYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRMFAGHL-ADITCTRFHPNSNYVATGSADRTIRLWDVLNGHCVRVLTGHK 597

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Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L GH+G VY +++S DRN +L++S DGT+RLW + T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     +TC +FH N NYVA+GS DR +RL+D+ +G  VR  TGHK
Sbjct:  465 KILYGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVAYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRMFAGHL-ADITCTRFHPNSNYVATGSADRTIRLWDVLNGHCVRVLTGHK 597

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Cavefish
Match: taf5l (TATA-box binding protein associated factor 5 like [Source:NCBI gene;Acc:103041723])

HSP 1 Score: 113.235 bits (282), Expect = 2.108e-27
Identity = 59/135 (43.70%), Postives = 79/135 (58.52%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH G VY  A+ TD + +L+ S D TVR W + ++TN+A Y+    P+W VD +P    Y  T   DR   L+      PLR + G     V CVKFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  348 KTLRGHCGPVYRTAFLTDSSGLLSCSEDSTVRYWDLNSFTNVALYRGHAYPVWDVDVSPC-SLYFCTASQDRTARLWTFQRTYPLRLYAGH-LADVDCVKFHPNSNYIATGSTDKTVRLWSTQQGSSVRLFTGHR 480

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Cavefish
Match: daw1 (dynein assembly factor with WD repeats 1 [Source:NCBI gene;Acc:103035445])

HSP 1 Score: 68.1662 bits (165), Expect = 2.658e-12
Identity = 38/143 (26.57%), Postives = 70/143 (48.95%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLFEF 743
            ++K L+ H   + ++A++   +  +T S D T ++W   + T L   +     ++AV F   YG  +ATG  D+   L++ +  +    F G     + C+ F+     VA+GS D  V+L+D+ SG  V + +GH   +   
Sbjct:   84 LFKTLQAHILPLTNVAFNKSGSSFITGSYDRTCKIWDTASGTELHTLEGHKNVVYAVAFNNPYGDKIATGSFDKTCRLWSVETGQCFYTFRGH-TAEIVCLAFNPQSTLVATGSMDTTVKLWDVESGVEVSTLSGHSAEIISL 225

HSP 2 Score: 50.447 bits (119), Expect = 1.285e-6
Identity = 36/137 (26.28%), Postives = 63/137 (45.99%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLF 737
            LKGH G +  + ++ D + ++TAS D T ++W       LA      + +  V F    G  +AT   D    +Y A   + + +  G   G ++ V F+     V +GS D+  R++ + SG  ++   GH   +F
Sbjct:  257 LKGHRGEISSVNFNWDSSLIVTASMDKTCKVWDAEGGRCLATLTGHNDEVLDVCFN-FKGQLIATASADGTSRVYDAQTFQFVCKLEGH-EGEISKVCFNPQGTCVLTGSADKTARVWSVSSGSCLQVLEGHTDEIF 391

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Cavefish
Match: ENSAMXT00000007962.2 (WD repeat-containing protein 5-like [Source:NCBI gene;Acc:103023146])

HSP 1 Score: 62.7734 bits (151), Expect = 1.210e-10
Identity = 38/135 (28.15%), Postives = 69/135 (51.11%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K LKGH+  V+   ++   N V++ S D +VR+W + T   L       +P+ AV F    G  + +   D    ++ + + + L+  + D   PV+ VKF  N  Y+ + + D  ++L+D   G  ++++TGHK
Sbjct:  120 KTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRMWDSTSGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 253

HSP 2 Score: 60.077 bits (144), Expect = 8.248e-10
Identity = 36/131 (27.48%), Postives = 66/131 (50.38%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSF 713
            K L GH  G+ D+AWS D N +++AS D T+++W M +   L   +     ++  +F P   + + +G  D  V ++     K L+        PV+ V F+ + + + S S D + R++D  SG  +++ 
Sbjct:   78 KSLSGHKLGISDVAWSPDSNLLVSASDDKTLKIWDMGSGKCLKTLKGHSNYVFCCNFNP-QSNLVVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVSAVHFNRDGSLIVSSSYDGLCRMWDSTSGQCLKTL 206

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Sea Lamprey
Match: taf5l (TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5987])

HSP 1 Score: 95.9005 bits (237), Expect = 4.155e-22
Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+ H+G VY + +      +L+ S D +VR W   T+TN A YQ    P+W VD + + G Y  +G +DR   L+  +   PLR + G     V  V+FH N +YVA+GS DR VRL+  + G   R FTGH+
Sbjct:  337 KTLRAHSGPVYAVRFLPGGAGLLSCSEDASVRFWDPRTFTNTAVYQGHAYPVWDVDVSAL-GLYFCSGSHDRTARLWVPERAFPLRVYAGHV-SDVNVVRFHPNGSYVATGSADRTVRLWSAQQGSAARLFTGHR 469

HSP 2 Score: 51.9878 bits (123), Expect = 1.123e-7
Identity = 39/122 (31.97%), Postives = 63/122 (51.64%), Query Frame = 3

Query:  333 GHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLY---AADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIR 689
            GH   V  + +  + + V T S+D TVRLW     +    +      + A+ F+P  G  LA+GG D+ V L+   +   +K LR    D    +TC+ F  + + +ASGS+D  VR++D+R
Sbjct:  425 GHVSDVNVVRFHPNGSYVATGSADRTVRLWSAQQGSAARLFTGHRGAVLALAFSP-GGRLLASGGEDQRVRLWDIGSGAIVKELRGHSDD----ITCLSFSPDGSALASGSSDGSVRVWDVR 541

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Sea Lamprey
Match: snrnp40 (small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978])

HSP 1 Score: 56.225 bits (134), Expect = 2.799e-9
Identity = 37/135 (27.41%), Postives = 66/135 (48.89%), Query Frame = 3

Query:  318 YKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            Y  LKGH G + DI +STD + + T+S+D TV LW   T   + + +     + A   A      + T  +D  V L+       +  F  + Y  ++ V F++  + + SG  D V++++D+R   ++ +  GH
Sbjct:   93 YAHLKGHTGAILDIHYSTDGSTIFTSSTDKTVGLWDSETGERIKRLKGHTSFVNACFPARRGPQMVCTASDDGTVKLWDTRKKGSVHSF-QNTYQCLS-VTFNDTSDQILSGGIDNVIKVWDLRQNKLIYTMKGH 225

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009560.1 (pep scaffold:Pmarinus_7.0:GL479618:22463:45788:1 gene:ENSPMAG00000008637.1 transcript:ENSPMAT00000009560.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.4546 bits (132), Expect = 3.024e-9
Identity = 38/138 (27.54%), Postives = 65/138 (47.10%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAAD----NLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            + L+GH   +Y + W TD   +++AS DG + +W   T   +         +    +AP  G Y+A GG D   ++Y       N++  R   G   G ++C +F ++ N + + S D    L+DI +     +FTGH
Sbjct:   49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGSYVACGGLDNICSIYNLKTREGNVRVSRELPGH-TGYLSCCRFLDD-NQIITSSGDTTCALWDIETAQQTTTFTGH 183

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Sea Lamprey
Match: WDR86 (WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:28020])

HSP 1 Score: 52.373 bits (124), Expect = 5.476e-8
Identity = 39/144 (27.08%), Postives = 67/144 (46.53%), Query Frame = 3

Query:  312 AVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDC---YGP----VTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            A  + L+GH G V  +A       + +  +DGTVR W + +   L  Y +  + +  +  A     +L +G +D     + ++        VG C   Y P    V+ +++H+ + +  SG  D + R FD RSG + R+F GH
Sbjct:  193 ACARTLRGHQGPVLCLAVDASNGALYSGGADGTVRKWDLSSGQQLRSYTEHTDLVICLQLA---NRHLYSGSSDGTARRWLSE--------VGGCARVYRPHKHTVSTLRYHDGILFTGSG--DTLARAFDARSGALKRTFKGH 323

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Sea Lamprey
Match: POC1A (POC1 centriolar protein A [Source:HGNC Symbol;Acc:HGNC:24488])

HSP 1 Score: 52.373 bits (124), Expect = 6.667e-8
Identity = 32/132 (24.24%), Postives = 66/132 (50.00%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
             K H   V  +++S D   ++TAS D ++++W +     L         + +  F+P  G  + +G +DR V ++ +++ + +  F  +  G V  V FH +   +A+  TD  V+++DIR   +++ +  H
Sbjct:   98 FKAHTATVRSVSFSADGQSLVTASDDKSIKVWTVHRQKFLYSLNQHSNWVRSAKFSP-DGRLIVSGSDDRTVRVWDSNSRECVHTFY-EHGGFVNQVDFHPSGTCIAAAGTDNTVKVWDIRMNKLLQHYQVH 227

HSP 2 Score: 46.9802 bits (110), Expect = 4.118e-6
Identity = 35/134 (26.12%), Postives = 62/134 (46.27%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGP-VTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            L  H+  V    +S D   +++ S D TVR+W   +   +  + + G  +  VDF P  G  +A  G D  V ++     K L+ +    +G  V  + FH   NY+ + S D  +++ D+  G +  +  GH+
Sbjct:  140 LNQHSNWVRSAKFSPDGRLIVSGSDDRTVRVWDSNSRECVHTFYEHGGFVNQVDFHP-SGTCIAAAGTDNTVKVWDIRMNKLLQHY--QVHGAAVNSLSFHPTGNYLITASNDSTLKVLDLVEGRLFYTLHGHQ 270

HSP 3 Score: 46.595 bits (109), Expect = 5.566e-6
Identity = 36/130 (27.69%), Postives = 57/130 (43.85%), Query Frame = 3

Query:  333 GHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            GH   V  + +S   + V++AS D TVRLW          ++     + +V F+   G  L T  +D+ + ++     K L   +      V   KF  +   + SGS DR VR++D  S   V +F  H
Sbjct:   58 GHKDAVMSVQFSPSGHLVVSASRDKTVRLWVPSVKGESTVFKAHTATVRSVSFS-ADGQSLVTASDDKSIKVWTVHRQKFLYS-LNQHSNWVRSAKFSPDGRLIVSGSDDRTVRVWDSNSRECVHTFYEH 185

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Yeast
Match: TAF5 (Subunit (90 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification [Source:SGD;Acc:S000000402])

HSP 1 Score: 114.39 bits (285), Expect = 1.456e-28
Identity = 59/134 (44.03%), Postives = 81/134 (60.45%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            K L GH+G VY  ++S D   +L+ S D TVRLW M T T L  Y+    P+W V F+P+ GHY AT  +D+   L++ D++ PLR F G     V CV FH N  YV +GS+D+  R++D+ +G  VR F GH
Sbjct:  519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL-GHYFATASHDQTARLWSCDHIYPLRIFAGHL-NDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGH 650

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Yeast
Match: MET30 (F-box protein containing five copies of the WD40 motif; controls cell cycle function, sulfur metabolism, and methionine biosynthesis as part of the ubiquitin ligase complex; interacts with and regulates Met4p, localizes within the nucleus; dissociation of Met30p from SCF complex in response to cadmium stress is regulated by Cdc48p [Source:SGD;Acc:S000001308])

HSP 1 Score: 53.5286 bits (127), Expect = 2.377e-8
Identity = 37/142 (26.06%), Postives = 67/142 (47.18%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGP------VTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            + + L GH+ GV  + +  D  +++T S D T+R+W  +T   ++ Y+   + + +VD    Y   + +G  D+ V ++  ++          CY        V CVK H       S S D  +R++DIR+   ++ F GH
Sbjct:  334 LIRRLSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVD---SYQKVIVSGSADKTVKVWHVESRT--------CYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGH 462

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Yeast
Match: COP1 (Alpha subunit of COPI vesicle coatomer complex; complex surrounds transport vesicles in the early secretory pathway [Source:SGD;Acc:S000002304])

HSP 1 Score: 51.6026 bits (122), Expect = 1.064e-7
Identity = 33/122 (27.05%), Postives = 60/122 (49.18%), Query Frame = 3

Query:  357 IAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            IA+   R  VL A    T++LW     T L +++D   P+  +DF P    ++ + G+D  + +++ D  K L    G     V  V FH  + ++ S S D+ +R+++ ++   +   TGH
Sbjct:   17 IAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFV-SAGDDYTIKVWSLDTNKCLYTLTGH-LDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGH 136

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Yeast
Match: PRP46 (Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs [Source:SGD;Acc:S000006072])

HSP 1 Score: 51.2174 bits (121), Expect = 1.104e-7
Identity = 39/133 (29.32%), Postives = 57/133 (42.86%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            L GH   V D+A S     + + S D TV+ W +     +  Y      +  V   P     +AT G D  + L+      P+   VG   GP+  V+       V S STD  VRL+D+ +G  ++  T HK
Sbjct:  178 LAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLD-LIATAGRDSVIKLWDMRTRIPVITLVGH-KGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHK 308

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Yeast
Match: PWP2 (Conserved 90S pre-ribosomal component; essential for proper endonucleolytic cleavage of the 35 S rRNA precursor at A0, A1, and A2 sites; contains eight WD-repeats; PWP2 deletion leads to defects in cell cycle and bud morphogenesis [Source:SGD;Acc:S000000653])

HSP 1 Score: 50.447 bits (119), Expect = 2.461e-7
Identity = 32/133 (24.06%), Postives = 65/133 (48.87%), Query Frame = 3

Query:  330 KGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRV-VRLFDIRSGGMVRSFTGHK 725
            +GH      +A+S D ++V+TAS DG +++W + +   LA +++    + AV FA   G  + +   D  V  +     +  R F G       C+    +   V +GS D   + ++ +++G ++ + +GH+
Sbjct:  342 QGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAK-RGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHE 473

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Nematostella
Match: EDO29288 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T426])

HSP 1 Score: 119.783 bits (299), Expect = 2.108e-32
Identity = 60/135 (44.44%), Postives = 84/135 (62.22%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            + L GH+G V+ ++   D   +L+ S D T+RLW + T+T L  Y+    P+W V F P  GHY A+  +DR   L++ D+ +PLR F G     V  V FH N NY+A+GS+DR VRL+DI++G  VR FTGHK
Sbjct:   15 RRLVGHSGPVFAVSIDHDNKFLLSCSEDKTIRLWSLFTFTTLVAYRGHNYPVWDVQFCP-RGHYFASTSHDRTARLWSTDHQQPLRIFAGHV-SDVNKVAFHPNCNYIATGSSDRTVRLWDIQTGSSVRLFTGHK 147

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Nematostella
Match: EDO33060 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7ST98])

HSP 1 Score: 121.709 bits (304), Expect = 9.348e-31
Identity = 59/135 (43.70%), Postives = 84/135 (62.22%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            + L GH+G V+ ++   D   +L+ S D T+RLW + T+T L  Y+    P+W V F P  GHY A+  +DR   L++ D+ +PLR F G     V  + FH N NY+A+GS+DR VRL+DI++G  VR FTGHK
Sbjct:  341 RRLVGHSGPVFAVSIDHDNKFLLSCSEDKTIRLWSLFTFTTLVAYRGHNYPVWDVQFCP-RGHYFASTSHDRTARLWSTDHQQPLRIFAGHV-SDVNVIAFHPNCNYIATGSSDRTVRLWDIQTGSSVRLFTGHK 473

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BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Nematostella
Match: EDO43158 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZJ8])

HSP 1 Score: 101.293 bits (251), Expect = 7.681e-24
Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            L+GH+G VY   + ++   +L+AS D TVRLW + +++N+ +Y+    P+W++D +     Y ATG  D    L+  +   PLR  V    G    VKFH N  Y+A+GS+DR  RL+D++SG  VR F GHK
Sbjct:  346 LRGHSGPVYATCFGSEGKILLSASEDTTVRLWSLHSYSNIVQYKGHNHPVWSLDLS-AQSLYFATGSQDSSARLWNTEYNYPLRFHVFGFQG----VKFHPNCTYLATGSSDRTCRLWDLQSGNCVRLFRGHK 473

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Nematostella
Match: EDO34865 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN68])

HSP 1 Score: 60.8474 bits (146), Expect = 2.299e-10
Identity = 32/141 (22.70%), Postives = 67/141 (47.52%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLF 737
            ++K L+ H   + ++A++      +T S D T ++W   +       +     ++A+ F   YG  +ATG  D+   L+ A+  K    + G     + C+ F+     +A+GS D   +L+D+++G  + + +GH   + 
Sbjct:   84 LFKILRAHILPLTNVAFNKSGTSFITGSYDRTCKVWDTASGEETLTLEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWNAETGKCYHTYRGHS-AEIVCLAFNPQSTVIATGSMDTTAKLWDVQTGAEISTLSGHSAEII 223

HSP 2 Score: 47.3654 bits (111), Expect = 4.925e-6
Identity = 36/134 (26.87%), Postives = 59/134 (44.03%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDR-NQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            L+GH   VY IA++    +++ T S D T +LW   T      Y+     +  + F P     +ATG  D    L+       +    G     ++C  F++    + +GS D  V ++D RSG  V +  GH+
Sbjct:  130 LEGHKNVVYAIAFNNPYGDKIATGSFDKTCKLWNAETGKCYHTYRGHSAEIVCLAFNP-QSTVIATGSMDTTAKLWDVQTGAEISTLSGHSAEIISCA-FNSTGTQLLTGSFDHTVSVWDTRSGRRVHTLIGHR 261

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Nematostella
Match: EDO33297 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSL6])

HSP 1 Score: 60.4622 bits (145), Expect = 2.393e-10
Identity = 37/135 (27.41%), Postives = 68/135 (50.37%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K LKGH+  V+   ++   N +++ S D +VR+W + T   L       +P+ AV F    G  + +   D    ++   + + L+  + D   PV+ VKF  N  Y+ + + D  ++L+D   G  ++++TGHK
Sbjct:  143 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVTAVHFNR-DGALIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK 276

HSP 2 Score: 60.077 bits (144), Expect = 3.290e-10
Identity = 36/131 (27.48%), Postives = 64/131 (48.85%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSF 713
            K + GH  G+ D+AWSTD   +++AS D T+++W   T   L   +     ++  +F P   + + +G  D  V ++     K L+        PVT V F+ +   + S S D + R++D  SG  +++ 
Sbjct:  101 KTITGHKLGISDVAWSTDSRHLVSASDDKTLKIWDFATGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS-DPVTAVHFNRDGALIVSSSYDGLCRIWDTASGQCLKTL 229

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Medaka
Match: taf5 (TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:101175542])

HSP 1 Score: 139.428 bits (350), Expect = 3.396e-36
Identity = 68/135 (50.37%), Postives = 92/135 (68.15%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L GH+G VY I++S DRN +L+ S DGTVRLW ++T+T L  Y+    P+W   F+P YG+Y  +GG+DR   L+A D+ +PLR F G     VTC +FH N NYV +GS+DR +RL+D+ +G  VR FTGHK
Sbjct:  485 KILYGHSGPVYGISFSPDRNYLLSCSEDGTVRLWSLLTFTCLVGYKGHNYPVWDTQFSP-YGYYFVSGGHDRVARLWATDHYQPLRIFAGHL-ADVTCTRFHPNSNYVVTGSSDRTIRLWDVLTGNCVRIFTGHK 617

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Medaka
Match: taf5l (TATA-box binding protein associated factor 5 like [Source:NCBI gene;Acc:101159161])

HSP 1 Score: 107.842 bits (268), Expect = 1.681e-25
Identity = 56/135 (41.48%), Postives = 78/135 (57.78%), Query Frame = 3

Query:  321 KELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            K L+GH+G VY  A+ TD + +L+ S D T+R W + ++TN   YQ    P+W VD +P    Y  +   DR   L+      PLR + G     V C+KFH N NY+A+GSTD+ VRL+  + G  VR FTGH+
Sbjct:  348 KTLRGHSGPVYRTAFLTDSSGLLSCSEDTTIRYWDLGSFTNTVLYQGHAYPVWDVDVSPC-SLYFGSCSQDRTARLWTFSRTYPLRIYAGH-LSDVDCIKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHR 480

HSP 2 Score: 55.8398 bits (133), Expect = 3.281e-8
Identity = 39/121 (32.23%), Postives = 60/121 (49.59%), Query Frame = 3

Query:  333 GHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSG 695
            GH   V  I +  + N + T S+D TVRLW      ++  +     P+ ++ F+P  G YLA+ G D+ V L+   +    +   G     VT + F  + + VAS S D  VR++DIRS 
Sbjct:  436 GHLSDVDCIKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRGPVLSLAFSP-NGKYLASAGEDQRVKLWDLASGTLFKDLRGHT-DSVTSLSFSPDSSLVASSSMDNSVRVWDIRSS 554

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Medaka
Match: wdr83 (WD repeat domain 83 [Source:NCBI gene;Acc:101169657])

HSP 1 Score: 62.7734 bits (151), Expect = 9.409e-11
Identity = 47/150 (31.33%), Postives = 71/150 (47.33%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFA-------PVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRLFEF 743
            V ++L+GHAG V  + ++ +    L+ S DGTVR      W N ++     EP+  +D A        V  H L TG  D  V  Y   +L+  +  V     P+TCV F  +     S S D  VRL D  +G M+  + GHK++ ++ 
Sbjct:  101 VTRKLRGHAGKVNCVQFNEEATVTLSGSIDGTVR-----CWDNRSRK---SEPIQILDEARDGISSLKVVQHELLTGSVDGRVRRY---DLRMGQLHVDFIDSPITCVCFSQDGQCTLSSSLDSAVRLLDKSTGEMLGEYKGHKMKGYKL 239

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Medaka
Match: wdr61 (WD repeat domain 61 [Source:NCBI gene;Acc:101172406])

HSP 1 Score: 61.2326 bits (147), Expect = 2.772e-10
Identity = 36/137 (26.28%), Postives = 70/137 (51.09%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGP-VTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRL 734
            L+GH  GV  +  S +     ++S D  +RLW + +   +     G    W+V F+P    Y+ATG +   VN++  ++ K  + +  D  G  +  + +  +  Y+ASG+ D ++ +FDI +G ++ +  GH + +
Sbjct:   60 LEGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQIKSIDAGPVDAWSVAFSP-DSKYIATGSHHGKVNIFGVESSK--KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193

[Close]

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGP-VTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHKVRL 734
            L+GH  GV  +  S +     ++S D  +RLW + +   +     G    W+V F+P    Y+ATG +   VN++  ++ K  + +  D  G  +  + +  +  Y+ASG+ D ++ +FDI +G ++ +  GH + +
Sbjct:   60 LEGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQIKSIDAGPVDAWSVAFSP-DSKYIATGSHHGKVNIFGVESSK--KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Planmine SMEST
Match: SMESG000013017.1 (SMESG000013017.1)

HSP 1 Score: 299.286 bits (765), Expect = 8.604e-96
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 3

Query:  312 AVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            AVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK
Sbjct:  419 AVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 556

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Planmine SMEST
Match: SMESG000005136.1 (SMESG000005136.1)

HSP 1 Score: 145.976 bits (367), Expect = 5.610e-39
Identity = 67/139 (48.20%), Postives = 96/139 (69.06%), Query Frame = 3

Query:  309 SAVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            +A +  + GH+G VY+++WS ++  +++ASSDGTV+ W   T   +A +   G P+W+VD +P+  + L  G N   +N+YA D+  P+R+F  D +G VTCV+FH N NY+ASG  DR VRLFDIRSG +VRSFTGHK
Sbjct:  305 NAQFDLISGHSGAVYEMSWSKNQQLLISASSDGTVKCWRTATKDCIATFSAPG-PIWSVDLSPLSENLLVCGTNKESINVYALDHPNPIRQFSRDIHGAVTCVRFHGNDNYIASGGVDRTVRLFDIRSGTLVRSFTGHK 442

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Planmine SMEST
Match: SMESG000026747.1 (SMESG000026747.1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.308e-17
Identity = 46/133 (34.59%), Postives = 72/133 (54.14%), Query Frame = 3

Query:  309 SAVYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVR 707
            S V   L GH+  V  + +++  +Q+LT+S DG++R+W   T  ++  Y D   P+W +   P      A+G  D  V L+ A    P+R+ +G   G +  V F+ + NY+ SG  D  VRL+DIR+G  VR
Sbjct:  240 SGVSSSLFGHSMMVTSVQFTSQSDQILTSSLDGSIRVWNEETGVSIETYTDNAFPIWDIASNPRIDACFASGAFDGSVCLWDAHRENPVRKMIGH-LGSIKAVLFYKSGNYMVSGGDDGQVRLWDIRTGNCVR 371

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Planmine SMEST
Match: SMESG000068013.1 (SMESG000068013.1)

HSP 1 Score: 62.7734 bits (151), Expect = 8.959e-11
Identity = 39/140 (27.86%), Postives = 69/140 (49.29%), Query Frame = 3

Query:  315 VYKELKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLW--AVDFAPVYGHYLATGGNDRCVNLYAADNLKPL--RRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
            V + LKGH G V  +AWS D+  +++ S DG + +W    +TN  ++       W  A  ++P   H    G +++C       +  P+  +R V      ++C +F+ +   + + S D    L+D+ SG M++SF GH
Sbjct:   53 VRRLLKGHQGRVLSLAWSYDKRHLVSTSQDGKLIVW--DGFTNTKEFGLSMATTWVMACAYSPTGAHVACGGLDNKCTIYPLITDEDPVLKKRLVATHTSYLSCCQFNLSEYQLLTASGDSTCVLWDVESGQMIQSFHGH 190

HSP 2 Score: 48.9062 bits (115), Expect = 2.633e-6
Identity = 31/109 (28.44%), Postives = 55/109 (50.46%), Query Frame = 3

Query:  381 QVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVY-GHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMV 704
            Q+LTAS D T  LW + +   +  +      + ++D +P   G    +G  DRCVN++     + ++ + G     V  V+F+ + +  A+GS D   RLFD+R+   +
Sbjct:  163 QLLTASGDSTCVLWDVESGQMIQSFHGHSGDVMSLDLSPSESGRVFISGSCDRCVNVWDMRTGQCVQVYEGH-ESDVNSVRFYPSGDAFATGSDDATCRLFDLRADSEI 270

[Close]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Planmine SMEST
Match: SMESG000024482.1 (SMESG000024482.1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.374e-11
Identity = 37/133 (27.82%), Postives = 69/133 (51.88%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK 725
            L  H   V  + +S+D   + ++S D T++LW       +  +Q+ G  + ++ F P  G Y+A+GG D  VN++     K L+ +      PV  V FH + N++ S S D  ++++D+  G ++ +  GH+
Sbjct:  136 LNEHKNWVRCVRFSSDGQLIASSSDDKTIKLWDRHNQECIHTFQEHGGFVPSLAFHP-NGSYIASGGTDSHVNIWDIRMNKLLQHYTSHT-SPVNAVSFHPSGNFLISSSDDSSMKIYDLLEGRLLYTVQGHE 266

HSP 2 Score: 54.6842 bits (130), Expect = 4.732e-8
Identity = 35/132 (26.52%), Postives = 64/132 (48.48%), Query Frame = 3

Query:  327 LKGHAGGVYDIAWSTDRNQVLTASSDGTVRLWCMMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPLRRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGH 722
             + H   V  +  S D  +++T S D T+++W M          +    +  V F+   G  +A+  +D+ + L+   N + +  F  +  G V  + FH N +Y+ASG TD  V ++DIR   +++ +T H
Sbjct:   94 FRAHTATVRSVDISCDNLEMVTGSDDKTIKVWKMHRQKFSYSLNEHKNWVRCVRFSS-DGQLIASSSDDKTIKLWDRHNQECIHTF-QEHGGFVPSLAFHPNGSYIASGGTDSHVNIWDIRMNKLLQHYTSH 223

The following BLAST results are available for this feature:

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Human
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Celegans
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Fly
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Zebrafish
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Xenopus
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Mouse
BLAST of Transcription initiation factor TFIID subunit 5 vs. UniProt/SwissProt
BLAST of Transcription initiation factor TFIID subunit 5 vs. TrEMBL
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Cavefish
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Sea Lamprey
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Yeast
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Nematostella
BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Medaka
BLAST of Transcription initiation factor TFIID subunit 5 vs. Planmine SMEST

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
TAF5	7.158e-35	50.37	TATA-box binding protein associated factor 5 [Sour...	[more]
TAF5L	1.436e-26	42.22	TATA-box binding protein associated factor 5 like ...	[more]
TAF5L	1.436e-26	42.22	TATA-box binding protein associated factor 5 like ...	[more]
WDR5B	1.593e-11	29.63	WD repeat domain 5B [Source:HGNC Symbol;Acc:HGNC:1...	[more]
KATNB1	7.587e-11	26.95	katanin regulatory subunit B1 [Source:HGNC Symbol;...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
taf-5	2.022e-24	40.00	TAF (TBP-associated transcription factor) family ...	[more]
taf-5	2.022e-24	40.00	TAF (TBP-associated transcription factor) family ...	[more]
taf-5	2.022e-24	40.00	TAF (TBP-associated transcription factor) family ...	[more]
wdr-5.1	5.734e-11	28.78	WD repeat-containing protein wdr-5.1 [Source:UniP...	[more]
wdr-5.1	5.734e-11	28.78	WD repeat-containing protein wdr-5.1 [Source:UniP...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Taf5	4.599e-29	44.53	gene:FBgn0010356 transcript:FBtr0088240	[more]
can	5.748e-20	37.50	gene:FBgn0011569 transcript:FBtr0076299	[more]
wda	5.683e-16	35.38	gene:FBgn0039067 transcript:FBtr0084387	[more]
CG3909	6.092e-12	28.15	gene:FBgn0027524 transcript:FBtr0082172	[more]
Gbeta5	1.959e-11	29.20	gene:FBgn0030011 transcript:FBtr0071189	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
taf5	1.735e-36	48.92	TAF5 RNA polymerase II, TATA box binding protein (...	[more]
taf5l	6.856e-27	42.96	TAF5-like RNA polymerase II, p300/CBP-associated f...	[more]
daw1	1.170e-10	26.47	dynein assembly factor with WDR repeat domains 1 [...	[more]
katnb1	1.197e-10	29.55	katanin p80 (WD repeat containing) subunit B 1 [So...	[more]
daw1	1.284e-10	25.17	dynein assembly factor with WDR repeat domains 1 [...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
myadm	5.404e-36	48.92	myeloid-associated differentiation marker [Source:...	[more]
myadm	5.736e-36	48.92	myeloid-associated differentiation marker [Source:...	[more]
myadm	6.373e-36	48.92	myeloid-associated differentiation marker [Source:...	[more]
rxfp3	1.917e-24	39.26	relaxin family peptide receptor 3 [Source:Xenbase;...	[more]
rxfp3	2.054e-24	39.26	relaxin family peptide receptor 3 [Source:Xenbase;...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Taf5	5.361e-35	50.37	TATA-box binding protein associated factor 5 [Sour...	[more]
Taf5l	1.240e-26	42.22	TATA-box binding protein associated factor 5 like ...	[more]
Taf5l	1.240e-26	42.22	TATA-box binding protein associated factor 5 like ...	[more]
Wdr5b	2.935e-11	28.24	WD repeat domain 5B [Source:MGI Symbol;Acc:MGI:191...	[more]
Daw1	7.545e-11	26.57	dynein assembly factor with WDR repeat domains 1 [...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q15542\|TAF5_HUMAN	3.437e-34	50.37	Transcription initiation factor TFIID subunit 5 OS...	[more]
sp\|Q8C092\|TAF5_MOUSE	1.122e-33	49.63	Transcription initiation factor TFIID subunit 5 OS...	[more]
sp\|P49846\|TAF5_DROME	4.610e-28	44.53	Transcription initiation factor TFIID subunit 5 OS...	[more]
sp\|P38129\|TAF5_YEAST	1.011e-26	44.03	Transcription initiation factor TFIID subunit 5 OS...	[more]
sp\|O75529\|TAF5L_HUMAN	6.897e-26	42.22	TAF5-like RNA polymerase II p300/CBP-associated fa...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A183WWH6	6.638e-36	53.62	WD_REPEATS_REGION domain-containing protein OS=Tri...	[more]
A0A3Q2R363	2.760e-35	50.36	WD_REPEATS_REGION domain-containing protein OS=Fun...	[more]
T1L1N7	3.099e-35	49.64	Uncharacterized protein OS=Tetranychus urticae OX=...	[more]
A0A564Z159	8.343e-35	52.90	WD_REPEATS_REGION domain-containing protein (Fragm...	[more]
M7BPG8	8.562e-35	50.37	Protein RRP5 like protein OS=Chelonia mydas OX=846...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
taf5	1.701e-35	48.15	TATA-box binding protein associated factor 5 [Sour...	[more]
taf5	1.701e-35	48.15	TATA-box binding protein associated factor 5 [Sour...	[more]
taf5l	2.108e-27	43.70	TATA-box binding protein associated factor 5 like ...	[more]
daw1	2.658e-12	26.57	dynein assembly factor with WD repeats 1 [Source:N...	[more]
ENSAMXT00000007962.2	1.210e-10	28.15	WD repeat-containing protein 5-like [Source:NCBI g...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
taf5l	4.155e-22	39.26	TAF5-like RNA polymerase II, p300/CBP-associated f...	[more]
snrnp40	2.799e-9	27.41	small nuclear ribonucleoprotein 40 (U5) [Source:ZF...	[more]
ENSPMAT00000009560.1	3.024e-9	27.54	pep scaffold:Pmarinus_7.0:GL479618:22463:45788:1 g...	[more]
WDR86	5.476e-8	27.08	WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:2...	[more]
POC1A	6.667e-8	24.24	POC1 centriolar protein A [Source:HGNC Symbol;Acc:...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
TAF5	1.456e-28	44.03	Subunit (90 kDa) of TFIID and SAGA complexes; invo...	[more]
MET30	2.377e-8	26.06	F-box protein containing five copies of the WD40 m...	[more]
COP1	1.064e-7	27.05	Alpha subunit of COPI vesicle coatomer complex; co...	[more]
PRP46	1.104e-7	29.32	Member of the NineTeen Complex (NTC); this complex...	[more]
PWP2	2.461e-7	24.06	Conserved 90S pre-ribosomal component; essential f...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO29288	2.108e-32	44.44	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO33060	9.348e-31	43.70	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO43158	7.681e-24	39.85	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO34865	2.299e-10	22.70	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO33297	2.393e-10	27.41	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
taf5	3.396e-36	50.37	TATA-box binding protein associated factor 5 [Sour...	[more]
taf5l	1.681e-25	41.48	TATA-box binding protein associated factor 5 like ...	[more]
wdr83	9.409e-11	31.33	WD repeat domain 83 [Source:NCBI gene;Acc:10116965...	[more]
wdr61	2.772e-10	26.28	WD repeat domain 61 [Source:NCBI gene;Acc:10117240...	[more]
wdr61	2.772e-10	26.28	WD repeat domain 61 [Source:NCBI gene;Acc:10117240...	[more]

BLAST of Transcription initiation factor TFIID subunit 5 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000013017.1	8.604e-96	100.00	SMESG000013017.1	[more]
SMESG000005136.1	5.610e-39	48.20	SMESG000005136.1	[more]
SMESG000026747.1	1.308e-17	34.59	SMESG000026747.1	[more]
SMESG000068013.1	8.959e-11	27.86	SMESG000068013.1	[more]
SMESG000024482.1	9.374e-11	27.82	SMESG000024482.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30032062 ID=SMED30032062|Name=Transcription initiation factor TFIID subunit 5|organism=Schmidtea mediterranea sexual|type=transcript|length=1015bp
TCAATTTTATCCATTTATAATCACTTGCAATATATATTAAATAAGGTGTA
TTTTCTAGGTTTTCGCAAATAGACCAATTATTAATACTAATGATATTATT
TGTACACAGACCACCAAGAATTTAACTAGCAGACCACCAGTGGTCCGCGG
ACAACAGTTTTGAGAAACACTGATGTAAGCCATTTTCTACTGTGTTTATT
CCAAAGATGAAATATTTCGACATAAAATAGGTTCTGAACACTAAAACAAA
ATTTAAATCTTTCGTTCTCTGCTTCTTATAACATTATTATTATTAATTAT
TATAACTCAGCGCTGTTTACAAAGAATTGAAAGGCCATGCAGGTGGTGTA
TATGATATTGCATGGTCAACAGATCGCAATCAAGTTCTTACGGCCTCTAG
TGATGGAACAGTCCGGCTCTGGTGCATGATGACATGGACAAATCTCGCCA
AATACCAAGATGGTGGTGAACCGTTATGGGCGGTCGATTTTGCGCCAGTT
TATGGTCATTACTTAGCTACAGGTGGCAATGATAGATGCGTTAATCTTTA
CGCAGCCGACAACTTGAAACCTCTTCGTCGATTTGTTGGTGATTGTTACG
GCCCGGTAACTTGTGTGAAATTTCACAATAATGTAAATTATGTTGCATCG
GGAAGTACTGATCGTGTTGTGAGATTGTTTGATATTAGGTCTGGTGGAAT
GGTTCGGTCATTTACAGGTCACAAAGTACGTTTATTTGAATTTACAAATA
TATTACTGACTTCAGTGAGTAGTTTAACTTAGTTATAATTAAGCATTTTC
AATATAATTTTATTGTCAAACTTTTTATTTTTCAAAATTATCTACTCACA
ATAGTCAGTAATATATAAATTTATATTTATAAAATCAGTTGAATTAGCAA
AGTATTGTGCTGTATCATACAGGCAGATACATGGATTATTATTTAGCATA
TTAATCGTCCATTGAAATGTAAAAGTTTTATTTTGTGAGTCTTATATAAT
TGTCAAGTGCATTTG

protein sequence of SMED30032062-orf-1

>SMED30032062-orf-1 ID=SMED30032062-orf-1|Name=SMED30032062-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=119bp
MMTWTNLAKYQDGGEPLWAVDFAPVYGHYLATGGNDRCVNLYAADNLKPL
RRFVGDCYGPVTCVKFHNNVNYVASGSTDRVVRLFDIRSGGMVRSFTGHK
VRLFEFTNILLTSVSSLT*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **molecular function**
Term	Definition
GO:0003743	translation initiation factor activity
GO:0005515	protein binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003713	transcription coactivator activity

Vocabulary: **biological process**
Term	Definition
GO:0006413	translational initiation
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated
GO:0006366	transcription from RNA polymerase II promoter
GO:0043966	histone H3 acetylation

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0002109	X1 cell
PLANA:0002111	X2 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR001632	Gprotein_B
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom

Vocabulary: **cellular component**
Term	Definition
GO:0000932	P-body
GO:0005634	nucleus
GO:0016607	nuclear speck
GO:0030914	STAGA complex
GO:0033276	transcription factor TFTC complex

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 3..43 e-value: 0.18 score: 20.9 coord: 46..86 e-value: 3.2E-6 score: 36.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 48..86 e-value: 6.3E-6 score: 26.8
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 61..95 score: 10.241
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 2..116 e-value: 2.1E-22 score: 82.0
None	No IPR available	PANTHER	PTHR19879	TRANSCRIPTION INITIATION FACTOR TFIID	coord: 1..100
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 10..95 score: 12.42
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	SSF50978	WD40 repeat-like	coord: 4..100

Main menu

Transcription initiation factor TFIID subunit 5

Zeng et. al., 2018

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 4

Owlery

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