Selenoprotein F
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30031984 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 15
Homology
BLAST of Selenoprotein F vs. Ensembl Human
Match: SELENOF (selenoprotein F [Source:HGNC Symbol;Acc:HGNC:17705]) HSP 1 Score: 126.716 bits (317), Expect = 2.070e-33 Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 41 CRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 162
BLAST of Selenoprotein F vs. Ensembl Human
Match: SELENOF (selenoprotein F [Source:HGNC Symbol;Acc:HGNC:17705]) HSP 1 Score: 124.02 bits (310), Expect = 1.990e-32 Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 41 CRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCG-KLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 161
BLAST of Selenoprotein F vs. Ensembl Human
Match: SERP2 (stress associated endoplasmic reticulum protein family member 2 [Source:HGNC Symbol;Acc:HGNC:20607]) HSP 1 Score: 89.3521 bits (220), Expect = 2.582e-21 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
BLAST of Selenoprotein F vs. Ensembl Human
Match: SELENOF (selenoprotein F [Source:HGNC Symbol;Acc:HGNC:17705]) HSP 1 Score: 78.1814 bits (191), Expect = 1.141e-16 Identity = 40/85 (47.06%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVR 822 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I R Sbjct: 41 CRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKAGR 125
BLAST of Selenoprotein F vs. Ensembl Human
Match: SERP2 (stress associated endoplasmic reticulum protein family member 2 [Source:HGNC Symbol;Acc:HGNC:20607]) HSP 1 Score: 73.9442 bits (180), Expect = 8.511e-16 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = -2 Query: 307 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGS-AIFEIV 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGS ++F +V Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSVSVFSLV 59
BLAST of Selenoprotein F vs. Ensembl Celegans
Match: Y76B12C.3 (pep chromosome:WBcel235:IV:1973702:1975677:1 gene:WBGene00022297.1 transcript:Y76B12C.3a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y76B12C.3) HSP 1 Score: 95.5153 bits (236), Expect = 6.389e-23 Identity = 53/124 (42.74%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 568 CKSLGFSSD-LKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFP-NVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 CK+ GF+ + LKC C L +++L T+ C CC K + E KYP A L VC L RFPQ+QAFV A +F V++ +VRG P + L D++ E L +EKWDTDT+++FF + L Sbjct: 29 CKAAGFNPETLKCGLCERLSDYHLETLLTDCLQCCIKEE-EFKHEKYPTAILEVCECNLARFPQVQAFVHKDMARQFGGKVKVKHVRGVRPQVALKDADFKTKEVLSVEKWDTDTLIDFFNQWL 151
BLAST of Selenoprotein F vs. Ensembl Celegans
Match: F59F4.2 (pep chromosome:WBcel235:X:15841572:15842379:1 gene:WBGene00010337.1 transcript:F59F4.2.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F59F4.2) HSP 1 Score: 83.5741 bits (205), Expect = 9.021e-20 Identity = 34/57 (59.65%), Postives = 49/57 (85.96%), Query Frame = -2 Query: 286 FANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLGF 456 AN++ SK V NRGNV KSL+P +DKYP + WL+GLF+FVVCGSA+FEI++++++G+ Sbjct: 9 LANKQFSKNVNNRGNVAKSLKPAEDKYPAAPWLIGLFVFVVCGSAVFEIIRYVKMGW 65
BLAST of Selenoprotein F vs. Ensembl Celegans
Match: T09A12.5 (pep chromosome:WBcel235:IV:8225676:8226366:1 gene:WBGene00020374.1 transcript:T09A12.5.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T09A12.5) HSP 1 Score: 73.559 bits (179), Expect = 3.306e-16 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = -2 Query: 292 ANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRL 453 AN + SK V RGNVPK + + K+P S WL+GLFIFVVCGSAIFE++++I++ Sbjct: 10 ANAQFSKNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV 63
BLAST of Selenoprotein F vs. Ensembl Celegans
Match: T09A12.5 (pep chromosome:WBcel235:IV:8225674:8226352:1 gene:WBGene00020374.1 transcript:T09A12.5.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T09A12.5) HSP 1 Score: 73.559 bits (179), Expect = 3.306e-16 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = -2 Query: 292 ANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRL 453 AN + SK V RGNVPK + + K+P S WL+GLFIFVVCGSAIFE++++I++ Sbjct: 10 ANAQFSKNVTQRGNVPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV 63
BLAST of Selenoprotein F vs. Ensembl Fly
Match: CG7484 (gene:FBgn0036745 transcript:FBtr0075184) HSP 1 Score: 117.087 bits (292), Expect = 4.233e-30 Identity = 55/124 (44.35%), Postives = 80/124 (64.52%), Query Frame = 1 Query: 565 NCKSLGF-SSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 +C++LGF + L CS C +L +F L TI+ C CC +Q + Y A L VC + +PQIQAF++S + A+FPN++I YVRG +PV++LLD++ E L I KW+TDT+ EFF+ L Sbjct: 25 DCRALGFIKAQLMCSSCEKLDDFGLDTIKPQCKQCCTLDQQPAAQRTYAKAILEVCTCKFRAYPQIQAFIQSGRPAKFPNLQIKYVRGLDPVVKLLDASGKVQETLSITKWNTDTVEEFFETHL 148
BLAST of Selenoprotein F vs. Ensembl Fly
Match: CG32276 (gene:FBgn0047135 transcript:FBtr0073107) HSP 1 Score: 79.7221 bits (195), Expect = 2.336e-18 Identity = 39/55 (70.91%), Postives = 44/55 (80.00%), Query Frame = -2 Query: 295 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIR 459 R ANEKASK V RGNVPKS + ++ +YPV WLL LFIFVVCGSAIF+IVQ IR Sbjct: 8 RVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIR 62
BLAST of Selenoprotein F vs. Ensembl Fly
Match: CG32276 (gene:FBgn0047135 transcript:FBtr0073106) HSP 1 Score: 79.7221 bits (195), Expect = 2.336e-18 Identity = 39/55 (70.91%), Postives = 44/55 (80.00%), Query Frame = -2 Query: 295 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIR 459 R ANEKASK V RGNVPKS + ++ +YPV WLL LFIFVVCGSAIF+IVQ IR Sbjct: 8 RVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQSIR 62
BLAST of Selenoprotein F vs. Ensembl Zebrafish
Match: selenof (selenoprotein F [Source:NCBI gene;Acc:352923]) HSP 1 Score: 122.094 bits (305), Expect = 4.077e-32 Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L F+L + C CC + YP A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 29 CRELGFSSNLLCSSCELLGQFSLNQLDLPCRQCCQEEAQLENRKLYPGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 150
BLAST of Selenoprotein F vs. Ensembl Zebrafish
Match: serp2 (stress-associated endoplasmic reticulum protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-081104-143]) HSP 1 Score: 89.3521 bits (220), Expect = 1.643e-21 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
BLAST of Selenoprotein F vs. Ensembl Zebrafish
Match: SERP1 (zgc:92744 [Source:ZFIN;Acc:ZDB-GENE-040718-312]) HSP 1 Score: 75.0998 bits (183), Expect = 1.669e-16 Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = -2 Query: 286 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLGF 459 R ANEK SK + RGNV S +DK V WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVKSSRNVSEDKVSVGPWLLALFVFVVCGSAIFQIIQSIRMGM 65
BLAST of Selenoprotein F vs. Ensembl Zebrafish
Match: serp1 (stress-associated endoplasmic reticulum protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8741]) HSP 1 Score: 72.4034 bits (176), Expect = 1.523e-15 Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLR-PQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV KS R Q++K V WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITLRGNVAKSTRGTQEEKAVVGPWLLALFVFVVCGSAIFQIIQSIRMG 65
BLAST of Selenoprotein F vs. Ensembl Zebrafish
Match: zgc:85858 (zgc:85858 [Source:ZFIN;Acc:ZDB-GENE-040426-2333]) HSP 1 Score: 68.1662 bits (165), Expect = 4.814e-14 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLRP-QDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 + ANEK SK + RG+V K+ R ++K PV WLL LF+FVVCGSAIF+I+Q IR G Sbjct: 8 KVANEKHSKTITQRGHVQKTTRVVNEEKSPVGPWLLALFVFVVCGSAIFQIIQSIRQG 65
BLAST of Selenoprotein F vs. Ensembl Xenopus
Match: serp2 (stress-associated endoplasmic reticulum protein family member 2 [Source:NCBI gene;Acc:779835]) HSP 1 Score: 89.3521 bits (220), Expect = 2.341e-21 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
BLAST of Selenoprotein F vs. Ensembl Xenopus
Match: serp2 (stress-associated endoplasmic reticulum protein family member 2 [Source:NCBI gene;Acc:779835]) HSP 1 Score: 72.7886 bits (177), Expect = 1.631e-15 Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = -2 Query: 319 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAI 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGS + Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSGM 54
BLAST of Selenoprotein F vs. Ensembl Xenopus
Match: kiaa0513 (KIAA0513 [Source:Xenbase;Acc:XB-GENE-5956311]) HSP 1 Score: 73.1738 bits (178), Expect = 4.438e-15 Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = -2 Query: 286 RFANEKASKKVLNRGNVPKSLRP-QDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLGF 459 R ANEK SK + RGNV KS R ++K V WLL LFIFVVCGSAIF+I+Q IR+G Sbjct: 63 RMANEKHSKNITQRGNVAKSSRNVTEEKSAVGPWLLALFIFVVCGSAIFQIIQSIRMGM 121
BLAST of Selenoprotein F vs. Ensembl Xenopus
Match: kiaa0513 (KIAA0513 [Source:Xenbase;Acc:XB-GENE-5956311]) HSP 1 Score: 73.1738 bits (178), Expect = 4.471e-15 Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = -2 Query: 286 RFANEKASKKVLNRGNVPKSLRP-QDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLGF 459 R ANEK SK + RGNV KS R ++K V WLL LFIFVVCGSAIF+I+Q IR+G Sbjct: 63 RMANEKHSKNITQRGNVAKSSRNVTEEKSAVGPWLLALFIFVVCGSAIFQIIQSIRMGM 121
BLAST of Selenoprotein F vs. Ensembl Xenopus
Match: kiaa0513 (KIAA0513 [Source:Xenbase;Acc:XB-GENE-5956311]) HSP 1 Score: 55.0694 bits (131), Expect = 2.537e-9 Identity = 28/48 (58.33%), Postives = 32/48 (66.67%), Query Frame = -2 Query: 319 RFANEKASKKVLNRGNVPKSLRP-QDDKYPVSTWLLGLFIFVVCGSAI 459 R ANEK SK + RGNV KS R ++K V WLL LFIFVVCGS + Sbjct: 8 RMANEKHSKNITQRGNVAKSSRNVTEEKSAVGPWLLALFIFVVCGSGV 55
BLAST of Selenoprotein F vs. Ensembl Mouse
Match: Selenof (selenoprotein F [Source:MGI Symbol;Acc:MGI:1927947]) HSP 1 Score: 126.331 bits (316), Expect = 1.795e-33 Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 38 CRELGFSSNLLCSSCDLLGQFNLLPLDPVCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 159
BLAST of Selenoprotein F vs. Ensembl Mouse
Match: Serp2 (stress-associated endoplasmic reticulum protein family member 2 [Source:MGI Symbol;Acc:MGI:1919911]) HSP 1 Score: 89.3521 bits (220), Expect = 1.773e-21 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
BLAST of Selenoprotein F vs. Ensembl Mouse
Match: Serp2 (stress-associated endoplasmic reticulum protein family member 2 [Source:MGI Symbol;Acc:MGI:1919911]) HSP 1 Score: 70.8626 bits (172), Expect = 3.687e-15 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = -2 Query: 322 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSA 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGS Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSG 53
BLAST of Selenoprotein F vs. Ensembl Mouse
Match: Serp1 (stress-associated endoplasmic reticulum protein 1 [Source:MGI Symbol;Acc:MGI:92638]) HSP 1 Score: 70.4774 bits (171), Expect = 6.695e-15 Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLR-PQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV K+ R ++K V WLL LFIFVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65
BLAST of Selenoprotein F vs. Ensembl Mouse
Match: Selenof (selenoprotein F [Source:MGI Symbol;Acc:MGI:1927947]) HSP 1 Score: 64.3142 bits (155), Expect = 4.545e-12 Identity = 32/65 (49.23%), Postives = 38/65 (58.46%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQ 762 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+Q Sbjct: 38 CRELGFSSNLLCSSCDLLGQFNLLPLDPVCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQ 102
BLAST of Selenoprotein F vs. UniProt/SwissProt
Match: sp|O60613|SEP15_HUMAN (Selenoprotein F OS=Homo sapiens OX=9606 GN=SELENOF PE=1 SV=4) HSP 1 Score: 126.716 bits (317), Expect = 9.941e-33 Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 41 CRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 162
BLAST of Selenoprotein F vs. UniProt/SwissProt
Match: sp|Q9ERR7|SEP15_MOUSE (Selenoprotein F OS=Mus musculus OX=10090 GN=Selenof PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.320e-32 Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 38 CRELGFSSNLLCSSCDLLGQFNLLPLDPVCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 159
BLAST of Selenoprotein F vs. UniProt/SwissProt
Match: sp|Q923V8|SEP15_RAT (Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.347e-32 Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 38 CRELGFSSNLLCSSCDLLGQFNLLPLDPVCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 159
BLAST of Selenoprotein F vs. UniProt/SwissProt
Match: sp|A8YXY3|SEP15_BOVIN (Selenoprotein F OS=Bos taurus OX=9913 GN=SELENOF PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 2.971e-32 Identity = 61/123 (49.59%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 565 NCKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 +C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD + EEL I KW+TD++ EF E+L Sbjct: 37 SCRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFKGLQIKYVRGSDPVLKLLDDSGNIAEELSILKWNTDSVEEFLSEKL 159
BLAST of Selenoprotein F vs. UniProt/SwissProt
Match: sp|A1Z623|SEP15_PIG (Selenoprotein F OS=Sus scrofa OX=9823 GN=SELENOF PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.230e-32 Identity = 60/123 (48.78%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 565 NCKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 +C+ LGFSS+L C C L F+LL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 37 SCRELGFSSNLLCGSCDLLGQFDLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 159
BLAST of Selenoprotein F vs. TrEMBL
Match: A0A2C9KDI0 (Sep15_SelM domain-containing protein OS=Biomphalaria glabrata OX=6526 PE=4 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.262e-36 Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTE-STATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C GF+ +L CS C + +FNL I+ SC CC K++ E S KYPYA+L+VCG +LGRFPQ+QAFVKS + +FP + + YVRG++P+I+LLD N VE LGI+KW+TD++ EFF E L Sbjct: 29 CALKGFTPNLLCSTCELMDDFNLSPIKPSCLECCQKDEAELSGPVKYPYAELVVCGCKLGRFPQVQAFVKSDRPNQFPRLTVRYVRGADPIIKLLDENHNVVETLGIDKWNTDSVEEFFLEHL 151
BLAST of Selenoprotein F vs. TrEMBL
Match: A0A1S3IE82 (selenoprotein F-like OS=Lingula unguis OX=7574 GN=LOC106179527 PE=4 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 8.774e-36 Identity = 63/126 (50.00%), Postives = 91/126 (72.22%), Query Frame = 1 Query: 559 SLNCKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATK-YPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 S C+ LGF+++L CS C+EL NF L + C+ CC +++ E + +P+A+L VC +LGR+PQ+QAFVKS + ++FP + + YVRG++PVI+LLD NRV E L IEKW+TD++ EFF ERL Sbjct: 25 SEQCRELGFTTNLFCSTCNELANFELQKLSEDCHQCCQEDKDEEKNEQLFPFAELQVCQUKLGRYPQVQAFVKSDRPSQFPGLRVKYVRGADPVIKLLDDNRVVQETLSIEKWNTDSVEEFFHERL 150
BLAST of Selenoprotein F vs. TrEMBL
Match: A0A1U7TBM3 (selenoprotein F OS=Tarsius syrichta OX=1868482 GN=SELENOF PE=4 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.312e-30 Identity = 62/123 (50.41%), Postives = 80/123 (65.04%), Query Frame = 1 Query: 565 NCKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 +C+ LGFSS+L CS C L FNLL + +C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 37 SCRELGFSSNLLCSSCDLLGQFNLLQLDPNCRGCCQEEAQFETKKLYAGAILEVCGUKLGRFPQVQAFVRSDKTKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 159
BLAST of Selenoprotein F vs. TrEMBL
Match: A0A2U3Y6P5 (LOW QUALITY PROTEIN: 15 kDa selenoprotein-like OS=Leptonychotes weddellii OX=9713 GN=LOC102726805 PE=4 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.803e-30 Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 41 CRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 162
BLAST of Selenoprotein F vs. TrEMBL
Match: A0A384C1Z0 (LOW QUALITY PROTEIN: 15 kDa selenoprotein OS=Ursus maritimus OX=29073 GN=LOC103662940 PE=4 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.973e-30 Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L FNLL + C CC + T Y A L VCG +LGRFPQ+QAFV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 41 CRELGFSSNLLCSSCDLLGQFNLLQLDPDCRGCCQEEAQFETKKLYAGAILEVCGXKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLSEKL 162
BLAST of Selenoprotein F vs. Ensembl Cavefish
Match: selenof (selenoprotein F [Source:NCBI gene;Acc:352923]) HSP 1 Score: 105.916 bits (263), Expect = 1.644e-26 Identity = 54/123 (43.90%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCC-DKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ +GFSS+L CS C L F+L ++ C CC ++ Q ES K P +I+ FPQ+QAFV+S K F ++I YVRGS+PV++LLD N +EL I KW+TD++ EF E+L Sbjct: 30 CREMGFSSNLLCSSCDLLGEFSLTQLEPFCRKCCQEEAQLESRKVKIPIYLVIL-------FPQVQAFVRSDKPKMFKGLQIKYVRGSDPVLKLLDDNGNIADELSILKWNTDSVEEFLGEKL 145
BLAST of Selenoprotein F vs. Ensembl Cavefish
Match: serp2 (stress-associated endoplasmic reticulum protein 2 [Source:NCBI gene;Acc:111190086]) HSP 1 Score: 89.3521 bits (220), Expect = 1.392e-21 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
BLAST of Selenoprotein F vs. Ensembl Cavefish
Match: ENSAMXT00000036257.1 (stress-associated endoplasmic reticulum protein 2 [Source:NCBI gene;Acc:111190086]) HSP 1 Score: 89.3521 bits (220), Expect = 1.392e-21 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
BLAST of Selenoprotein F vs. Ensembl Cavefish
Match: serp1 (stress associated endoplasmic reticulum protein 1 [Source:NCBI gene;Acc:103030196]) HSP 1 Score: 78.5666 bits (192), Expect = 7.349e-18 Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLR-PQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV KS R PQD+K V WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKSSRGPQDEKAAVGPWLLALFVFVVCGSAIFQIIQSIRMG 65
BLAST of Selenoprotein F vs. Ensembl Cavefish
Match: zgc:92744 (stress-associated endoplasmic reticulum protein 1-like [Source:NCBI gene;Acc:103025790]) HSP 1 Score: 70.8626 bits (172), Expect = 4.132e-15 Identity = 33/57 (57.89%), Postives = 40/57 (70.18%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV + +DK V WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVKSTKNNVEDKVSVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
BLAST of Selenoprotein F vs. Ensembl Sea Lamprey
Match: selenof (selenoprotein F [Source:NCBI gene;Acc:352923]) HSP 1 Score: 62.3882 bits (150), Expect = 7.341e-13 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 766 FVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 FV+S K + F + I YVRGS+PV++LLD + EEL I KW+TD++ EF E+L Sbjct: 1 FVRSNKPSTFKGLTIKYVRGSDPVLKLLDESGNVAEELSITKWNTDSVEEFLSEKL 56
BLAST of Selenoprotein F vs. Ensembl Nematostella
Match: EDO37917 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEF7]) HSP 1 Score: 80.1073 bits (196), Expect = 6.890e-19 Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK S+ V RGNVPKSL+P ++KY V LLGLFIFVVCGSAIF+I+Q IR+ Sbjct: 8 RLANEKHSQNVQTRGNVPKSLKPAEEKYAVGPILLGLFIFVVCGSAIFQIIQSIRMA 64
BLAST of Selenoprotein F vs. Ensembl Nematostella
Match: EDO43335 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZ27]) HSP 1 Score: 61.2326 bits (147), Expect = 2.933e-12 Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 766 FVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 FV+S + +FPN+ + +VRGS+P+++L + EEL IEKWDTD + EF E+L Sbjct: 2 FVRSDRPDKFPNLRVEFVRGSDPILKLHGDDGGIKEELSIEKWDTDNVEEFLMEKL 57
BLAST of Selenoprotein F vs. Ensembl Medaka
Match: selenof (selenoprotein F [Source:NCBI gene;Acc:101158232]) HSP 1 Score: 117.087 bits (292), Expect = 1.760e-30 Identity = 60/122 (49.18%), Postives = 77/122 (63.11%), Query Frame = 1 Query: 568 CKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG*QLGRFPQIQAFVKSAKAAEFPNVEISYVRGSEPVIRLLDSNRVAVEELGIEKWDTDTIVEFFQERL 933 C+ LGFSS+L CS C L F+L +Q C CC + YP A L VCG +LGRFPQ+Q FV+S K F ++I YVRGS+PV++LLD N EEL I KW+TD++ EF E+L Sbjct: 27 CRDLGFSSNLLCSSCDLLGEFSLTKLQPDCGRCCQQEAQMEGRKLYPGAILEVCG-KLGRFPQVQ-FVRSEKPKIFKGLQIKYVRGSDPVLKLLDDNGNIAEELSILKWNTDSVEEFLGEKL 146
BLAST of Selenoprotein F vs. Ensembl Medaka
Match: serp2 (stress-associated endoplasmic reticulum protein 2 [Source:NCBI gene;Acc:101163859]) HSP 1 Score: 73.9442 bits (180), Expect = 7.181e-16 Identity = 39/89 (43.82%), Postives = 47/89 (52.81%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSL--------------------------------RPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV K+L RPQ++KYPV WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKTLKASAELSLRTAVMSSRCESRLHQKANVENWEKRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 96
BLAST of Selenoprotein F vs. Ensembl Medaka
Match: serp2 (stress-associated endoplasmic reticulum protein 2 [Source:NCBI gene;Acc:101163859]) HSP 1 Score: 72.0182 bits (175), Expect = 1.672e-15 Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = -2 Query: 322 RFANEKASKKVLNRGNVPKSLRPQDDKYPVSTWLLGLFIFVVCGSA 459 R ANEK SK + RGNV K+LRPQ++KYPV WLL LF+FVVCGS Sbjct: 8 RMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSG 53
BLAST of Selenoprotein F vs. Ensembl Medaka
Match: serp2 (stress-associated endoplasmic reticulum protein 2 [Source:NCBI gene;Acc:101163859]) HSP 1 Score: 67.0106 bits (162), Expect = 2.558e-13 Identity = 39/98 (39.80%), Postives = 47/98 (47.96%), Query Frame = -2 Query: 289 RFANEKASKKVLNRGNVPKSL-----------------------------------------RPQDDKYPVSTWLLGLFIFVVCGSAIFEIVQHIRLG 459 R ANEK SK + RGNV K+L RPQ++KYPV WLL LF+FVVCGSAIF+I+Q IR+G Sbjct: 8 RMANEKHSKNITQRGNVAKTLFQCKHGVKKKASAELSLRTAVMSSRCESRLHQKANVENWEKRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 105
BLAST of Selenoprotein F vs. Planmine SMEST
Match: SMESG000044517.1 (SMESG000044517.1) HSP 1 Score: 126.331 bits (316), Expect = 9.722e-35 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 1 Query: 496 MKELYXXXXXXXXXXXXXXAESLNCKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG 732 MKELYIFISSFLCFLSSVFAESLNCKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG Sbjct: 1 MKELYIFISSFLCFLSSVFAESLNCKSLGFSSDLKCSRCSELKNFNLLTIQASCNSCCDKNQTESTATKYPYAKLIVCG 79 The following BLAST results are available for this feature:
BLAST of Selenoprotein F vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Selenoprotein F vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 4
BLAST of Selenoprotein F vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of Selenoprotein F vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Selenoprotein F vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Selenoprotein F vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Selenoprotein F vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Selenoprotein F vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Selenoprotein F vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Selenoprotein F vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Selenoprotein F vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Selenoprotein F vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Selenoprotein F vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of Selenoprotein F vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30031984 ID=SMED30031984|Name=Selenoprotein F|organism=Schmidtea mediterranea sexual|type=transcript|length=1723bpback to top Annotated Terms
The following terms have been associated with this transcript:
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