zf-LYAR domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30031929 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 13
Homology
BLAST of zf-LYAR domain-containing protein vs. Ensembl Human
Match: LYAR (Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]) HSP 1 Score: 59.6918 bits (143), Expect = 8.058e-9 Identity = 37/125 (29.60%), Postives = 63/125 (50.40%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKL 433 MV F C++C S++ QV H + SC+ C +F + K+HVKCISE +KY G + +K K+ W I+E + + +++++ I N+P K+ F N++K+ L Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSVCRNCECLSCIDCGKDFWGDDYKNHVKCISEDQKYGGKGYEGK--THKGDIKQQAWIQKISELIKRPNVS-PKVRELLEQISAFDNVPRKKAKFQNWMKNSL 122
BLAST of zf-LYAR domain-containing protein vs. Ensembl Human
Match: LYAR (Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]) HSP 1 Score: 59.6918 bits (143), Expect = 8.058e-9 Identity = 37/125 (29.60%), Postives = 63/125 (50.40%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKL 433 MV F C++C S++ QV H + SC+ C +F + K+HVKCISE +KY G + +K K+ W I+E + + +++++ I N+P K+ F N++K+ L Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSVCRNCECLSCIDCGKDFWGDDYKNHVKCISEDQKYGGKGYEGK--THKGDIKQQAWIQKISELIKRPNVS-PKVRELLEQISAFDNVPRKKAKFQNWMKNSL 122
BLAST of zf-LYAR domain-containing protein vs. Ensembl Human
Match: LYAR (Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]) HSP 1 Score: 45.8246 bits (107), Expect = 8.486e-6 Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKG 238 MV F C++C S++ QV H + SC+ C +F + K+HVKCISE +KY G Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSVCRNCECLSCIDCGKDFWGDDYKNHVKCISEDQKYGG 60
BLAST of zf-LYAR domain-containing protein vs. Ensembl Celegans
Match: C16C10.8 (pep chromosome:WBcel235:III:4161951:4164171:-1 gene:WBGene00007628.1 transcript:C16C10.8.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C16C10.8) HSP 1 Score: 75.485 bits (184), Expect = 4.779e-15 Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH--SC-NSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALK 511 MV F C++C + + NQV H C N+ FSC+ C + ++++ K HVKCI+E +KY G ++ + ENK K+N W + +N + TDS +++++ S+ NIP KE F NF+ + L N A W I+ D ++ Sbjct: 1 MVFFSCNNCGEACKKNQVERHLFQCRNTTFSCIDCQLVYTRETYKDHVKCITENQKYGGKNY--VEKENKGEAKQNAWVDQVNRAIEF--VTDSQVKELLKSVAGFANIPRKEAKFINFLTNSCR---LRDKNLALRAWQAIAAEADKMR 143
BLAST of zf-LYAR domain-containing protein vs. Ensembl Fly
Match: CG12909 (gene:FBgn0033507 transcript:FBtr0088348) HSP 1 Score: 65.855 bits (159), Expect = 1.895e-11 Identity = 59/193 (30.57%), Postives = 95/193 (49.22%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH---SCNSK---FSCLSCNMEFSQQNVKSHVKCISEAEKY--KGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIAS----IKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMIS----PLKDALKKPISITKNNQVNAEAQKRKLEEQEESVTKK 601 MV F C+ C S++ V H C K SC+ C +F + +H+KCISEA+KY + F A + NKN +K+ +W + I L+S E NL + S +++ N+P K+ F NFV G + N A +W ++ +K+A + ++ K ++ QK+K E +EE+ KK Sbjct: 1 MVFFTCNICGESVKKPAVEKHYQTRCRGKDKNVSCMDCLKDFYGEEYVAHIKCISEAQKYASQSQGFAAKEPRNKNAQKQESWMDIIRSILDSSEY---NLTPAVRSAFQKLQSVDNVPRKKAKFENFV----GNCMRMPRNQATQVWDILEKELNKMKEAKQAELARAKAEKIAEIQQKQKAEVEEEAPPKK 186
BLAST of zf-LYAR domain-containing protein vs. Ensembl Xenopus
Match: kctd5 (potassium channel tetramerization domain containing 5 [Source:Xenbase;Acc:XB-GENE-1016270]) HSP 1 Score: 65.4698 bits (158), Expect = 7.336e-11 Identity = 40/125 (32.00%), Postives = 64/125 (51.20%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKL 433 MV F C++C SL+ QV H + SC+ C +F + ++H+KCISE +KY G F A NK K+ W I E + + N++ ++ + + NIP K+ F N++K+ L Sbjct: 1 MVFFTCNACGESLKKGQVEKHRGKCRNCGCLSCIDCGKDFWGDDYQNHLKCISEDQKYGGKAFEAK--ANKGDVKQQQWLERIQEIMKKPNIS-PNIRNILNQMSSYENIPRKKAKFQNWMKNSL 122
BLAST of zf-LYAR domain-containing protein vs. Ensembl Xenopus
Match: kctd5 (potassium channel tetramerization domain containing 5 [Source:Xenbase;Acc:XB-GENE-1016270]) HSP 1 Score: 65.4698 bits (158), Expect = 8.507e-11 Identity = 40/125 (32.00%), Postives = 64/125 (51.20%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKL 433 MV F C++C SL+ QV H + SC+ C +F + ++H+KCISE +KY G F A NK K+ W I E + + N++ ++ + + NIP K+ F N++K+ L Sbjct: 1 MVFFTCNACGESLKKGQVEKHRGKCRNCGCLSCIDCGKDFWGDDYQNHLKCISEDQKYGGKAFEAK--ANKGDVKQQQWLERIQEIMKKPNIS-PNIRNILNQMSSYENIPRKKAKFQNWMKNSL 122
BLAST of zf-LYAR domain-containing protein vs. Ensembl Mouse
Match: Lyar (Ly1 antibody reactive clone [Source:MGI Symbol;Acc:MGI:107470]) HSP 1 Score: 70.0922 bits (170), Expect = 2.450e-13 Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMIS 490 MV F C++C S++ QV H N + SC+ C +F + KSHVKCISE +KY G + A +K K+ W INE + + +++++ I N+P K+ F N++K+ L ++S++ + +W + S Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHVKCISEGQKYGGKGYEA--KTHKGDAKQQAWIQKINELIKKPNVS-PKVRELLQQISAFDNVPRKKAKFQNWMKNSLK---VHSDSVLEQVWDIFS 138
BLAST of zf-LYAR domain-containing protein vs. Ensembl Mouse
Match: Lyar (Ly1 antibody reactive clone [Source:MGI Symbol;Acc:MGI:107470]) HSP 1 Score: 69.707 bits (169), Expect = 2.879e-13 Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMIS 490 MV F C++C S++ QV H N + SC+ C +F + KSHVKCISE +KY G + A +K K+ W INE + + +++++ I N+P K+ F N++K+ L ++S++ + +W + S Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHVKCISEGQKYGGKGYEA--KTHKGDAKQQAWIQKINELIKKPNVS-PKVRELLQQISAFDNVPRKKAKFQNWMKNSLK---VHSDSVLEQVWDIFS 138
BLAST of zf-LYAR domain-containing protein vs. Ensembl Mouse
Match: Lyar (Ly1 antibody reactive clone [Source:MGI Symbol;Acc:MGI:107470]) HSP 1 Score: 72.4034 bits (176), Expect = 4.261e-13 Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMIS 490 MV F C++C S++ QV H N + SC+ C +F + KSHVKCISE +KY G + A +K K+ W INE + + +++++ I N+P K+ F N++K+ L ++S++ + +W + S Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHVKCISEGQKYGGKGYEA--KTHKGDAKQQAWIQKINELIKKPNVS-PKVRELLQQISAFDNVPRKKAKFQNWMKNSL---KVHSDSVLEQVWDIFS 138
BLAST of zf-LYAR domain-containing protein vs. Ensembl Mouse
Match: Lyar (Ly1 antibody reactive clone [Source:MGI Symbol;Acc:MGI:107470]) HSP 1 Score: 72.4034 bits (176), Expect = 4.261e-13 Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMIS 490 MV F C++C S++ QV H N + SC+ C +F + KSHVKCISE +KY G + A +K K+ W INE + + +++++ I N+P K+ F N++K+ L ++S++ + +W + S Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHVKCISEGQKYGGKGYEA--KTHKGDAKQQAWIQKINELIKKPNVS-PKVRELLQQISAFDNVPRKKAKFQNWMKNSL---KVHSDSVLEQVWDIFS 138
BLAST of zf-LYAR domain-containing protein vs. Ensembl Mouse
Match: Lyar (Ly1 antibody reactive clone [Source:MGI Symbol;Acc:MGI:107470]) HSP 1 Score: 64.6994 bits (156), Expect = 4.661e-12 Identity = 41/125 (32.80%), Postives = 64/125 (51.20%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKL 433 MV F C++C S++ QV H N + SC+ C +F + KSHVKCISE +KY G + A +K K+ W INE + +++++ I N+P K+ F N++K+ L Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHVKCISEGQKYGGKGYEAK--THKGDAKQQAWIQKINELIKK-PNVSPKVRELLQQISAFDNVPRKKAKFQNWMKNSL 122
BLAST of zf-LYAR domain-containing protein vs. UniProt/SwissProt
Match: sp|Q09464|YQ58_CAEEL (Uncharacterized protein C16C10.8 OS=Caenorhabditis elegans OX=6239 GN=C16C10.8 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 6.080e-14 Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH--SC-NSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALK 511 MV F C++C + + NQV H C N+ FSC+ C + ++++ K HVKCI+E +KY G ++ + ENK K+N W + +N + TDS +++++ S+ NIP KE F NF+ + L N A W I+ D ++ Sbjct: 1 MVFFSCNNCGEACKKNQVERHLFQCRNTTFSCIDCQLVYTRETYKDHVKCITENQKYGGKNY--VEKENKGEAKQNAWVDQVNRAIEF--VTDSQVKELLKSVAGFANIPRKEAKFINFLTNSCR---LRDKNLALRAWQAIAAEADKMR 143
BLAST of zf-LYAR domain-containing protein vs. UniProt/SwissProt
Match: sp|Q08288|LYAR_MOUSE (Cell growth-regulating nucleolar protein OS=Mus musculus OX=10090 GN=Lyar PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.981e-12 Identity = 44/144 (30.56%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMIS 490 MV F C++C S++ QV H N + SC+ C +F + KSHVKCISE +KY G + A +K K+ W INE + + +++++ I N+P K+ F N++K+ L ++S++ + +W + S Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHVKCISEGQKYGGKGYEA--KTHKGDAKQQAWIQKINELIKKPNVS-PKVRELLQQISAFDNVPRKKAKFQNWMKNSL---KVHSDSVLEQVWDIFS 138
BLAST of zf-LYAR domain-containing protein vs. UniProt/SwissProt
Match: sp|Q6AYK5|LYAR_RAT (Cell growth-regulating nucleolar protein OS=Rattus norvegicus OX=10116 GN=Lyar PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 7.821e-10 Identity = 42/145 (28.97%), Postives = 75/145 (51.72%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH-----SCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMIS 490 MV F C++C S++ QV H +C SC+ C +F + K+HVKCISE +KY G + A +K K+ W INE + + +++++ I N+P K+ F N++++ L ++S++ + +W + S Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSICRNCEC-LSCIDCGKDFWGDDYKNHVKCISEDQKYGGKGYEA--KTHKGDVKQQAWIQKINELIKKPNVS-PKVRELLQQISAFDNVPRKKAKFQNWMRNSL---KVHSDSVLEQVWNIFS 138
BLAST of zf-LYAR domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9NX58|LYAR_HUMAN (Cell growth-regulating nucleolar protein OS=Homo sapiens OX=9606 GN=LYAR PE=1 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 4.191e-8 Identity = 37/125 (29.60%), Postives = 63/125 (50.40%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKL 433 MV F C++C S++ QV H + SC+ C +F + K+HVKCISE +KY G + +K K+ W I+E + + +++++ I N+P K+ F N++K+ L Sbjct: 1 MVFFTCNACGESVKKIQVEKHVSVCRNCECLSCIDCGKDFWGDDYKNHVKCISEDQKYGGKGYEGK--THKGDIKQQAWIQKISELIKRPNVS-PKVRELLEQISAFDNVPRKKAKFQNWMKNSL 122
BLAST of zf-LYAR domain-containing protein vs. TrEMBL
Match: L7MKM7 (Putative cell growth-regulating nucleolar protein (Fragment) OS=Rhipicephalus pulchellus OX=72859 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.676e-15 Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH------SCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALKK 514 MVVF C++C SL+ NQV H SCN +C+ CN +F K H+KC++EAE+Y G +F K K+ W +++ + + E + ++ V ++N N+P KEKPF NF++S +G + + + A+ +W I + L+K Sbjct: 1 MVVFTCNTCGDSLKKNQVEKHVYTKCRSCNM-LTCIDCNKDFWGDAYKEHIKCVTEAERYGGKNFKPQ--TFKGEAKQQEWTELLSKIIETQEMSPP-VKDVFKRMQNFNNVPRKEKPFKNFLQSSMG---VRNPSLAQDVWQTIQKAQQTLQK 147
BLAST of zf-LYAR domain-containing protein vs. TrEMBL
Match: A0A0N8BIM4 (Cell growth-regulating nucleolar protein OS=Daphnia magna OX=35525 GN=APZ42_028360 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.415e-15 Identity = 63/187 (33.69%), Postives = 93/187 (49.73%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSK----FSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALKKPISITKNNQVNAEAQKRKLEEQEESVTKKIKKDTE 619 MV FVC+ C +S++ NQV H + SC+ C+ +F Q K+H+KC+SE EKY G D+ A N+NKN K+ W I + T+ L + I NIP K+ F NF+K+ LG V + +W +IS + L+ + NN A+K + EE+ K+ K D E Sbjct: 1 MVFFVCNGCGTSVKKNQVEKHQYQCRRSQHLSCVDCSKDFIGQEYKAHIKCVSEEEKYSGKDYVAKPNQNKNERKQTEWVAMIQNLVEKVGNTNDELSSALQRISQHENIPRKKPKFINFLKNILGNRV--PPRITEQLWDLISKEIEELRVSKAPNVNNSSTKVAEKTEKTSDEENGIKR-KHDGE 184
BLAST of zf-LYAR domain-containing protein vs. TrEMBL
Match: L7M4C7 (Putative cell growth-regulating nucleolar protein OS=Rhipicephalus pulchellus OX=72859 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.414e-15 Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH------SCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALKK 514 MVVF C++C SL+ NQV H SCN +C+ CN +F K H+KC++EAE+Y G +F K K+ W +++ + + E + ++ V ++N N+P KEKPF NF++S +G + + + A+ +W I + L+K Sbjct: 1 MVVFTCNTCGDSLKKNQVEKHVYTKCRSCNM-LTCIDCNKDFWGDAYKEHIKCVTEAERYGGKNFKPQ--TFKGEAKQQEWTELLSKIIETQEMSPP-VKDVFKRMQNFNNVPRKEKPFKNFLQSSMG---VRNPSLAQDVWQTIQKAQQTLQK 147
BLAST of zf-LYAR domain-containing protein vs. TrEMBL
Match: A0A131XFB0 (Putative cell growth-regulating nucleolar protein OS=Hyalomma excavatum OX=257692 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.622e-15 Identity = 51/154 (33.12%), Postives = 84/154 (54.55%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH------SCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALKK 514 MVVF C++C SL+ NQV H +CN +C+ CN +F K H KC++EAE+Y G +F K K+ W +++ + + E + +++V ++N N+P KEKPF NF++S +G + + A+ +W I + AL+K Sbjct: 1 MVVFTCNTCGDSLKKNQVEKHVYTKCRNCNL-LTCIDCNKDFWGDAYKEHFKCVTEAERYGGKNFKPQ--TFKGEVKQQEWTELLSKIIETQEMSPP-VKEVFKRMQNYNNVPRKEKPFKNFLQSSMG---VRNQALAQDVWQTIQKAQQALQK 147
BLAST of zf-LYAR domain-containing protein vs. TrEMBL
Match: A0A0L8IAX6 (zf-LYAR domain-containing protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22026918mg PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.727e-15 Identity = 73/214 (34.11%), Postives = 107/214 (50.00%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH--SCN-SKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALKKPISITKNNQVNAEAQKRKLEEQEESVTKKIKK--DTELPE--TKKKSTRSDNKLKAENNNKIE 691 MV F CS+C+ SL+ NQV H C S SCL CN EF SH+KCISE EKY G D+ A +NK K++ W + ++ + N++ ++ +K+ PNIP K+ F NF+ + L + + K IW ++ +T+ + E +RK E SVT +K D E+ E TKK+S R ++E NK E Sbjct: 1 MVFFSCSNCSESLKKNQVNKHYIRCRMSMVSCLDCNKEFWGDEFNSHIKCISEEEKYSGKDYKARPTQNKGEAKQDAWIQKVQTAIDK-SNSKPNIRNLLERLKDYPNIPRKQTKFENFLHNSL---RVRDQSLVKEIWDIL------------MTEKTSESKEVDERK---DETSVTNGEEKSVDGEIDENKTKKESKREKKAKRSEKQNKKE 195
BLAST of zf-LYAR domain-containing protein vs. Ensembl Cavefish
Match: lyar (Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]) HSP 1 Score: 68.9366 bits (167), Expect = 3.199e-12 Identity = 49/151 (32.45%), Postives = 76/151 (50.33%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH----SCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALK 511 MV F C+SC SL+ Q+ H +S FSC+ C +F + K+H++CISE +KY G + A NK K+ W I E L S L+ ++ I + N+P K+ F N++K L LN N +W +IS + +++ Sbjct: 1 MVFFTCNSCGESLKKAQIEKHVGMCRGSSCFSCIDCGKDFWGEEYKNHLRCISEDQKYGGRGYEAK--ANKGDVKQQQWIQRIQEAL-SKPGVSVRLKDLLNQICSYDNVPRKKAKFQNWIKCSLKIHDLNLQNQ---VWEIISAAESSVQ 145
BLAST of zf-LYAR domain-containing protein vs. Ensembl Sea Lamprey
Match: LYAR (Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]) HSP 1 Score: 70.4774 bits (171), Expect = 2.789e-13 Identity = 43/144 (29.86%), Postives = 73/144 (50.69%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH--SCN--SKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMIS 490 MV F C +C S++ QV H +C SC+ C M+F Q+ K+H++CISE EKY G F A +K K+ W + + +N+ + ++ ++ SI N+P K+ F N++K+ L ++ +W + S Sbjct: 1 MVFFTCDACGESVKKAQVEKHLNACRNCQCLSCIDCGMDFRGQDYKTHLRCISENEKYGGKGFEAK--ASKGDVKQQLWLQKVQDAINAPGIS-PQVRDIMNSIVGYDNVPRKKPKFQNWMKNSL---RVHKQELLDRVWEVFS 138
BLAST of zf-LYAR domain-containing protein vs. Ensembl Nematostella
Match: EDO48698 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RIF9]) HSP 1 Score: 69.3218 bits (168), Expect = 7.741e-13 Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVH------SCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKL 433 MV F+C++C S+R NQV H +C SC+ C +F H CI+EAEKY+G F +NK +K+ W + E + E D ++ + +K NIP K+ F NF K+ + Sbjct: 1 MVSFICNACGQSIRKNQVEKHYQTVCRNCEV-LSCIDCGKDFHGDGYAGHTSCITEAEKYQGKLFKPKDKQNKGEQKQQQWIKQVQE-ASRAEDEDPQIKGPLRRLKQYSNIPRKKAKFQNFCKNSI 125
BLAST of zf-LYAR domain-containing protein vs. Ensembl Medaka
Match: LYAR (Ly1 antibody reactive [Source:NCBI gene;Acc:101172807]) HSP 1 Score: 73.9442 bits (180), Expect = 1.154e-13 Identity = 65/220 (29.55%), Postives = 102/220 (46.36%), Query Frame = 2 Query: 26 FLCLNNCLFQSLFKIMVVFVCSSCNSSLRINQVAVH-----SCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALKKPISITKNNQVNAEAQKRKLEEQEESVTKKIKKDTELPETKKKSTRSDNKLKA 670 FL L+ L K MV F C++C SL+ QV H C SC+ C +F + K+H KCISE +KY G F A NK K+ W I+E LN + L+ V+ + N+P K+ F N++K+ L S + + + +W +I+ D P ++ + AE Q Q + +KK+ ++ + ++K R N KA Sbjct: 41 FLKERLLLWIKLIK-MVFFTCNACGESLKKAQVDKHVNICRGCQV-LSCIDCGKDFWDDDYKNHTKCISEDQKYGGKGFEAK--ANKGDVKQQQWLQRIHEALNK-SSISPKLRDVLRQVSAYDNVPRKKAKFQNWMKNSLKIS---NTSLHEEVWNIIAAAVDV---PEDTQQHMEKEAEVQANTNGTQTPFGHEDVKKNKKMNKRERKEARQQNNGKA 249
BLAST of zf-LYAR domain-containing protein vs. Planmine SMEST
Match: SMESG000081140.1 (SMESG000081140.1) HSP 1 Score: 453.751 bits (1166), Expect = 1.375e-153 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 2 Query: 71 MVVFVCSSCNSSLRINQVAVHSCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASXXXXXXXXXXXXWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALKKPISITKNNQVNAEAQKRKLEEQEESVTKKIKKDTELPETKKKSTRSDNKLKAENNNKIETCLPXXXXXXXXXXNLITDVATESPVEETSLEIKKQTKSNTN 817 MVVFVCSSCNSSLRINQVAVHSCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASKNENKNIEKRNNWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALKKPISITKNNQVNAEAQKRKLEEQEESVTKKIKKDTELPETKKKSTRSDNKLKAENNNKIETCLPKEKKFKKTKKNLITDVATESPVEETSLEIKKQTKSNTN Sbjct: 1 MVVFVCSSCNSSLRINQVAVHSCNSKFSCLSCNMEFSQQNVKSHVKCISEAEKYKGIDFNASKNENKNIEKRNNWCNTINEFLNSYETTDSNLQKVIASIKNQPNIPDKEKPFCNFVKSKLGYSVLNSNNYAKVIWTMISPLKDALKKPISITKNNQVNAEAQKRKLEEQEESVTKKIKKDTELPETKKKSTRSDNKLKAENNNKIETCLPKEKKFKKTKKNLITDVATESPVEETSLEIKKQTKSNTN 249 HSP 2 Score: 219.55 bits (558), Expect = 1.456e-63 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 3 Query: 1200 SRQIKSKPEKNKKLEIVKESSEEIGTKVDNERKTPEADAVVLTVXXXXXXXXXXXXXXXXXXVDEKIPSDDKPRVTENMMTNDGINNDKENVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVAESGDNSKEIEQVVLTEKSGEENSMKRKGKKINKDVQAETKEENNTAE 1736 SRQIKSKPEKNKKLEIVKESSEEIGTKVDNERKTPEADAVVLTVKGKEKKTKKNKNPEEKIKVDEKIPSDDKPRVTENMMTNDGINNDKENVAVKKKLKSKTKSKKLNVIEESKEEVEEIPKKPKKNKKQVAESGDNSKEIEQVVLTEKSGEENSMKRKGKKINKDVQAETKEENNTAE Sbjct: 377 SRQIKSKPEKNKKLEIVKESSEEIGTKVDNERKTPEADAVVLTVKGKEKKTKKNKNPEEKIKVDEKIPSDDKPRVTENMMTNDGINNDKENVAVKKKLKSKTKSKKLNVIEESKEEVEEIPKKPKKNKKQVAESGDNSKEIEQVVLTEKSGEENSMKRKGKKINKDVQAETKEENNTAE 555 The following BLAST results are available for this feature:
BLAST of zf-LYAR domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 3
BLAST of zf-LYAR domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of zf-LYAR domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of zf-LYAR domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of zf-LYAR domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 2
BLAST of zf-LYAR domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of zf-LYAR domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 4
BLAST of zf-LYAR domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of zf-LYAR domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of zf-LYAR domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of zf-LYAR domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of zf-LYAR domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of zf-LYAR domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of zf-LYAR domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30031929 ID=SMED30031929|Name=zf-LYAR domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1818bpback to top protein sequence of SMED30031929-orf-1 >SMED30031929-orf-1 ID=SMED30031929-orf-1|Name=SMED30031929-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=279bp MNPKKKKSKPEKNTEPEIKGEVEKQSKIKSKKNKKPEIIEEKIGEENKKKback to top protein sequence of SMED30031929-orf-2 >SMED30031929-orf-2 ID=SMED30031929-orf-2|Name=SMED30031929-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=322bp MKFLCLNNCLFQSLFKIMVVFVCSSCNSSLRINQVAVHSCNSKFSCLSCNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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