40S ribosomal protein S30

Overview
Name40S ribosomal protein S30
Smed IDSMED30031916
Length (bp)485
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 40S ribosomal protein S30 (SMED30031916) t-SNE clustered cells

Violin plots show distribution of expression levels for 40S ribosomal protein S30 (SMED30031916) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 40S ribosomal protein S30 (SMED30031916) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 40S ribosomal protein S30 (SMED30031916) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30031916

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 15

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30031916SMESG000065562.1 SmedASXL_004471SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
pharynxSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
protonephridiaSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30031916SMESG000065562.1 dd_Smed_v4_126_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
progenitor cellSMED30031916SMESG000065562.1 dd_Smed_v6_126_0dd_Smed_v6PMID:29674432
Plass et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30031916SMESG000065562.1 dd_Smed_v6_126_0dd_Smed_v6PMID:29674432
Plass et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of 40S ribosomal protein S30 vs. Ensembl Human
Match: FAU (FAU ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597])

HSP 1 Score: 122.479 bits (306), Expect = 7.650e-36
Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + + E    E TG ETVA +K  +A+ + +   D   LL+G  L++E  L   GV     +EV+  + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Human
Match: FAU (FAU ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597])

HSP 1 Score: 122.479 bits (306), Expect = 7.650e-36
Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + + E    E TG ETVA +K  +A+ + +   D   LL+G  L++E  L   GV     +EV+  + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Human
Match: FAU (FAU ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597])

HSP 1 Score: 122.479 bits (306), Expect = 7.650e-36
Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + + E    E TG ETVA +K  +A+ + +   D   LL+G  L++E  L   GV     +EV+  + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Human
Match: FAU (FAU ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597])

HSP 1 Score: 94.3597 bits (233), Expect = 2.663e-25
Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + + E    E TG ETVA +K                                    T+++   + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQELHTFEVTGQETVAQIKALT---------------------------------TLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 98          
BLAST of 40S ribosomal protein S30 vs. Ensembl Human
Match: FAU (FAU ubiquitin like and ribosomal protein S30 fusion [Source:HGNC Symbol;Acc:HGNC:3597])

HSP 1 Score: 79.337 bits (194), Expect = 2.909e-19
Identity = 52/108 (48.15%), Postives = 69/108 (63.89%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKR 377
            MQ+ + + E    E TG ETVA +K  +A+ + +   D   LL+G  L++E  L   GV     +EV+  + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKR
Sbjct:    1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKR 108          
BLAST of 40S ribosomal protein S30 vs. Ensembl Celegans
Match: rps-30 (40S ribosomal protein S30 [Source:UniProtKB/TrEMBL;Acc:Q18231])

HSP 1 Score: 87.4261 bits (215), Expect = 1.216e-22
Identity = 58/133 (43.61%), Postives = 85/133 (63.91%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDE--TVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQI +  +++  H    D   T++ +K  +   ++  ++    +LS  +   E  + SL    T+ +   L GGKVHGSLARAGKV+ QTPKVDKQ+K+K+ RGRA RR+QY RR+VNV +  G+K+GPNSN+
Sbjct:    1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGAGEEFSISYGSKVLSEELTLGECQIESL---STLSVNGRLLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYVNVASGPGKKRGPNSNS 130          
BLAST of 40S ribosomal protein S30 vs. Ensembl Celegans
Match: rps-30 (40S ribosomal protein S30 [Source:UniProtKB/TrEMBL;Acc:Q18231])

HSP 1 Score: 87.4261 bits (215), Expect = 1.216e-22
Identity = 58/133 (43.61%), Postives = 85/133 (63.91%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDE--TVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQI +  +++  H    D   T++ +K  +   ++  ++    +LS  +   E  + SL    T+ +   L GGKVHGSLARAGKV+ QTPKVDKQ+K+K+ RGRA RR+QY RR+VNV +  G+K+GPNSN+
Sbjct:    1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGAGEEFSISYGSKVLSEELTLGECQIESL---STLSVNGRLLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYVNVASGPGKKRGPNSNS 130          
BLAST of 40S ribosomal protein S30 vs. Ensembl Celegans
Match: rps-30 (40S ribosomal protein S30 [Source:UniProtKB/TrEMBL;Acc:Q18231])

HSP 1 Score: 87.4261 bits (215), Expect = 1.216e-22
Identity = 58/133 (43.61%), Postives = 85/133 (63.91%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDE--TVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQI +  +++  H    D   T++ +K  +   ++  ++    +LS  +   E  + SL    T+ +   L GGKVHGSLARAGKV+ QTPKVDKQ+K+K+ RGRA RR+QY RR+VNV +  G+K+GPNSN+
Sbjct:    1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGAGEEFSISYGSKVLSEELTLGECQIESL---STLSVNGRLLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYVNVASGPGKKRGPNSNS 130          
BLAST of 40S ribosomal protein S30 vs. Ensembl Fly
Match: RpS30 (gene:FBgn0038834 transcript:FBtr0346148)

HSP 1 Score: 96.6709 bits (239), Expect = 4.764e-26
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 3
Query:   60 MQIIINSVESF-IHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ +  +E+    E + D T+A +K  LA        +      G  L NE  +++L  +  +D+ + + GGKVHGSLARAGKVK QTPKV+KQEK+K+  GRAKRR+QYNRRFVN V   GR++GPN+N+
Sbjct:    1 MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALS-SFELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRGPNANS 131          
BLAST of 40S ribosomal protein S30 vs. Ensembl Fly
Match: RpS30 (gene:FBgn0038834 transcript:FBtr0083969)

HSP 1 Score: 96.6709 bits (239), Expect = 4.764e-26
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 3
Query:   60 MQIIINSVESF-IHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ +  +E+    E + D T+A +K  LA        +      G  L NE  +++L  +  +D+ + + GGKVHGSLARAGKVK QTPKV+KQEK+K+  GRAKRR+QYNRRFVN V   GR++GPN+N+
Sbjct:    1 MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALS-SFELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRGPNANS 131          
BLAST of 40S ribosomal protein S30 vs. Ensembl Fly
Match: RpS30 (gene:FBgn0038834 transcript:FBtr0083970)

HSP 1 Score: 96.6709 bits (239), Expect = 4.764e-26
Identity = 62/132 (46.97%), Postives = 86/132 (65.15%), Query Frame = 3
Query:   60 MQIIINSVESF-IHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ +  +E+    E + D T+A +K  LA        +      G  L NE  +++L  +  +D+ + + GGKVHGSLARAGKVK QTPKV+KQEK+K+  GRAKRR+QYNRRFVN V   GR++GPN+N+
Sbjct:    1 MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALS-SFELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQGFGRRRGPNANS 131          
BLAST of 40S ribosomal protein S30 vs. Ensembl Zebrafish
Match: faub (FAU ubiquitin like and ribosomal protein S30 fusion b [Source:ZFIN;Acc:ZDB-GENE-050417-416])

HSP 1 Score: 122.865 bits (307), Expect = 3.707e-36
Identity = 69/133 (51.88%), Postives = 88/133 (66.17%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ +        +  G ETVA +K  +   + L   D    LSG  L+++ ++   G+     +EVS  L GGKVHGSLARAGKV+ QTPKVDKQEKRK+  GRAKRR+QYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRGQSLHSVQLNGSETVAHIKAQIEALEGLACDDQIISLSGIPLEDDALICQSGIEEFNTLEVSSRLLGGKVHGSLARAGKVRGQTPKVDKQEKRKKRTGRAKRRIQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Zebrafish
Match: faub (FAU ubiquitin like and ribosomal protein S30 fusion b [Source:ZFIN;Acc:ZDB-GENE-050417-416])

HSP 1 Score: 122.865 bits (307), Expect = 3.707e-36
Identity = 69/133 (51.88%), Postives = 88/133 (66.17%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ +        +  G ETVA +K  +   + L   D    LSG  L+++ ++   G+     +EVS  L GGKVHGSLARAGKV+ QTPKVDKQEKRK+  GRAKRR+QYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRGQSLHSVQLNGSETVAHIKAQIEALEGLACDDQIISLSGIPLEDDALICQSGIEEFNTLEVSSRLLGGKVHGSLARAGKVRGQTPKVDKQEKRKKRTGRAKRRIQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Zebrafish
Match: faub (FAU ubiquitin like and ribosomal protein S30 fusion b [Source:ZFIN;Acc:ZDB-GENE-050417-416])

HSP 1 Score: 122.094 bits (305), Expect = 6.530e-36
Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ +           G ETVA +K  +   + L   D    LSG  L+++ ++   G+     +EVS  L GGKVHGSLARAGKV+ QTPKVDKQEKRK+  GRAKRR+QYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRGQSLHSVHLNGSETVAHIKAQIEALEGLACDDQIISLSGIPLEDDALICQSGIEEFNTLEVSSRLLGGKVHGSLARAGKVRGQTPKVDKQEKRKKRTGRAKRRIQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Zebrafish
Match: faua (FAU ubiquitin like and ribosomal protein S30 fusion a [Source:ZFIN;Acc:ZDB-GENE-040426-1700])

HSP 1 Score: 110.538 bits (275), Expect = 2.189e-31
Identity = 70/133 (52.63%), Postives = 92/133 (69.17%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + +      E +G+ETV D+K  +   + + + D   LLSG  L ++  L + G+     +EVS  L GGKVHGSLARAGKV+ QTPKVDKQEK+K+  GRAKRR+QYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFLRAQSLHTLEVSGNETVRDIKAHVEALEGVCVEDQLLLLSGAPLQDDSTLLNCGITEFCTLEVSGRLLGGKVHGSLARAGKVRGQTPKVDKQEKKKKKTGRAKRRIQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Xenopus
Match: fau (Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed [Source:NCBI gene;Acc:448719])

HSP 1 Score: 112.849 bits (281), Expect = 3.914e-32
Identity = 69/133 (51.88%), Postives = 90/133 (67.67%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVN--PTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ +        E +G ET++ +K  +++ + +P  D   +L+G+ L  E  L   GV    T+DI   L GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRGQSLHTLEVSGQETISQIKDQISSLEGIPSEDQVVVLAGSPLSEEHTLQQCGVCDLSTLDIVARLLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Mouse
Match: Fau (Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [Source:MGI Symbol;Acc:MGI:102547])

HSP 1 Score: 120.553 bits (301), Expect = 3.098e-35
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + + E    E TG ETVA +K  +A+ + +   D   LL+G+ L++E  L   GV     +EV+  + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQELHTLEVTGQETVAQIKDHVASLEGIAPEDQVVLLAGSPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Mouse
Match: Fau (Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [Source:MGI Symbol;Acc:MGI:102547])

HSP 1 Score: 120.553 bits (301), Expect = 3.098e-35
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + + E    E TG ETVA +K  +A+ + +   D   LL+G+ L++E  L   GV     +EV+  + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQELHTLEVTGQETVAQIKDHVASLEGIAPEDQVVLLAGSPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Mouse
Match: Fau (Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [Source:MGI Symbol;Acc:MGI:102547])

HSP 1 Score: 120.553 bits (301), Expect = 3.098e-35
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + + E    E TG ETVA +K  +A+ + +   D   LL+G+ L++E  L   GV     +EV+  + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQELHTLEVTGQETVAQIKDHVASLEGIAPEDQVVLLAGSPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Mouse
Match: Fau (Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [Source:MGI Symbol;Acc:MGI:102547])

HSP 1 Score: 120.553 bits (301), Expect = 3.098e-35
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + + E    E TG ETVA +K  +A+ + +   D   LL+G+ L++E  L   GV     +EV+  + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQELHTLEVTGQETVAQIKDHVASLEGIAPEDQVVLLAGSPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Mouse
Match: Fau (Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived) [Source:MGI Symbol;Acc:MGI:102547])

HSP 1 Score: 120.553 bits (301), Expect = 3.098e-35
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + + E    E TG ETVA +K  +A+ + +   D   LL+G+ L++E  L   GV     +EV+  + GGKVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQELHTLEVTGQETVAQIKDHVASLEGIAPEDQVVLLAGSPLEDEATLGQCGVEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. UniProt/SwissProt
Match: sp|Q9W6Y0|RS30_ORYLA (40S ribosomal protein S30 OS=Oryzias latipes OX=8090 GN=fau PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.336e-20
Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 3
Query:  276 KVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            KVHGSLARAGKV+ QTP VDK E++++  GRAKRR+QYNRRFVNVV T G+KKG N+N+
Sbjct:    1 KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFVNVVPTFGKKKGANANS 59          
BLAST of 40S ribosomal protein S30 vs. UniProt/SwissProt
Match: sp|P62864|RS30_RAT (40S ribosomal protein S30 OS=Rattus norvegicus OX=10116 GN=Fau PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.488e-19
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 3
Query:  276 KVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            KVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 59          
BLAST of 40S ribosomal protein S30 vs. UniProt/SwissProt
Match: sp|P0C2F0|RS30_PONAB (40S ribosomal protein S30 OS=Pongo abelii OX=9601 GN=FAU PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.488e-19
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 3
Query:  276 KVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            KVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 59          
BLAST of 40S ribosomal protein S30 vs. UniProt/SwissProt
Match: sp|P62863|RS30_PIG (40S ribosomal protein S30 OS=Sus scrofa OX=9823 GN=FAU PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.488e-19
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 3
Query:  276 KVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            KVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 59          
BLAST of 40S ribosomal protein S30 vs. UniProt/SwissProt
Match: sp|P62867|RS30_MUSSI (40S ribosomal protein S30 OS=Mus spicilegus OX=10103 GN=Fau PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.488e-19
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 3
Query:  276 KVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            KVHGSLARAGKV+ QTPKV KQEK+K+  GRAKRRMQYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 59          
BLAST of 40S ribosomal protein S30 vs. TrEMBL
Match: A0A0R3W5B2 (40S ribosomal protein S30 OS=Taenia asiatica OX=60517 GN=TASK_LOCUS5297 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.395e-42
Identity = 71/133 (53.38%), Postives = 99/133 (74.44%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQG-RKKGPNSNAK 455
            M +++ S ++ + + +  ++ ADLK  LA++D LPL DI+     ++LD++ VL+ L  +  ID+ V + GGKVHGSLARAGKV+ QTPKV+KQ+K+KQPRGRAKRRMQYNRRF  VV + G R++GPNSN K
Sbjct:    1 MHVVVRSFDTRLVDTSVCQSAADLKCLLASEDGLPLEDIQLYSGTSVLDSDTVLADLPADCAIDVSVGILGGKVHGSLARAGKVRGQTPKVEKQDKKKQPRGRAKRRMQYNRRFFAVVASTGLRRRGPNSNFK 133          
BLAST of 40S ribosomal protein S30 vs. TrEMBL
Match: A0A068Y837 (40S ribosomal protein S30 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000855200 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.628e-42
Identity = 72/133 (54.14%), Postives = 98/133 (73.68%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQG-RKKGPNSNAK 455
            M I++ S  + + + +  ++ ADLK  LA++D LPL DI+     +ILD++ +L+ L  +  ID+ V + GGKVHGSLARAGKV+ QTPKV+KQ+K+KQPRGRAKRRMQYNRRF  VV + G R++GPNSN K
Sbjct:    1 MHIVVRSFGTRLVDTSVCQSAADLKCLLASEDGLPLEDIRLYSGTSILDSDTILADLPADCAIDVSVGVLGGKVHGSLARAGKVRGQTPKVEKQDKKKQPRGRAKRRMQYNRRFFAVVASTGLRRRGPNSNFK 133          
BLAST of 40S ribosomal protein S30 vs. TrEMBL
Match: A0A183N0F6 (40S ribosomal protein S30 OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS21781 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.607e-42
Identity = 74/133 (55.64%), Postives = 97/133 (72.93%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVV-TTQGRKKGPNSNAK 455
            M++I+ S ++ + +     T ADLK+ LANKD LPL +++    G+++ +   L SL  + +ID+ V   GGKVHGSLARAGKV+ QTPKV+KQEKRK PRGRAKRRMQYN+RFV VV  T GR++GPNSN K
Sbjct:    1 MKVIVKSFDTRVIDTNDCPTAADLKILLANKDNLPLDNLQLYNCGSLISDSQSLVSLSSDASIDVVVPALGGKVHGSLARAGKVRGQTPKVEKQEKRKSPRGRAKRRMQYNKRFVAVVQQTGGRRRGPNSNVK 133          
BLAST of 40S ribosomal protein S30 vs. TrEMBL
Match: A0A068WER2 (40S ribosomal protein S30 OS=Echinococcus granulosus OX=6210 GN=EgrG_000855200 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.580e-42
Identity = 70/133 (52.63%), Postives = 98/133 (73.68%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQG-RKKGPNSNAK 455
            M +++ S  + + + +  ++ ADLK  LA++D LPL DI+     ++LD++ +L+ L  +  ID+ V + GGKVHGSLARAGKV+ QTPKV+KQ+K+KQPRGRAKRRMQYNRRF  VV + G R++GPNSN K
Sbjct:    1 MHVVVRSFGTRLVDTSVCQSAADLKCLLASEDGLPLEDIRLYSGTSVLDSDTILADLPADCAIDVSVGVLGGKVHGSLARAGKVRGQTPKVEKQDKKKQPRGRAKRRMQYNRRFFAVVASTGLRRRGPNSNFK 133          
BLAST of 40S ribosomal protein S30 vs. TrEMBL
Match: A0A0R3U6W8 (40S ribosomal protein S30 OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS2552 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 8.272e-42
Identity = 74/133 (55.64%), Postives = 96/133 (72.18%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQG-RKKGPNSNAK 455
            MQ+++ S ++ I + +   + ADLK  LA++D LPL  I+     + LDN   LS+L  N  ID+ V + GGKVHGSLARAGKV+ QTPKV+KQ+K+KQPRGRAKRRMQYNRRF  VV + G R++GPNSN K
Sbjct:    1 MQLVVRSFDTRIIDTSTCRSAADLKCLLASQDGLPLESIQLFSGASELDNAADLSNLTENSAIDVIVPILGGKVHGSLARAGKVRGQTPKVEKQDKKKQPRGRAKRRMQYNRRFFAVVASTGLRRRGPNSNFK 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Cavefish
Match: faua (FAU ubiquitin like and ribosomal protein S30 fusion [Source:NCBI gene;Acc:103021738])

HSP 1 Score: 114.39 bits (285), Expect = 5.727e-33
Identity = 71/133 (53.38%), Postives = 92/133 (69.17%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + +      E TG ETV D+K  +   + L + D   +L+G  L++E  L + GV     +EV+  L GGKVHGSLARAGKV+ QTPKVDKQEK+K+  GRAKRR+QYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFVRAQNLHTLEVTGQETVQDIKAHVQTLEGLSVEDQVLMLAGTPLEDEATLVNCGVLEHCTLEVAGRLLGGKVHGSLARAGKVRGQTPKVDKQEKKKKKTGRAKRRIQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Yeast
Match: RPS30B (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S30, no bacterial homolog; RPS30B has a paralog, RPS30A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000005708])

HSP 1 Score: 60.8474 bits (146), Expect = 9.716e-14
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 3
Query:  276 KVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKK---GPN 443
            KVHGSLARAGKVK+QTPKV+K EK K+P+GRA +R+ Y RRFVNV    G+++   GP+
Sbjct:    3 KVHGSLARAGKVKSQTPKVEKTEKPKKPKGRAYKRLLYTRRFVNVTLVNGKRRMNPGPS 61          
BLAST of 40S ribosomal protein S30 vs. Ensembl Yeast
Match: RPS30A (Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S30, no bacterial homolog; RPS30A has a paralog, RPS30B, that arose from the whole genome duplication [Source:SGD;Acc:S000004278])

HSP 1 Score: 60.8474 bits (146), Expect = 9.716e-14
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 3
Query:  276 KVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKK---GPN 443
            KVHGSLARAGKVK+QTPKV+K EK K+P+GRA +R+ Y RRFVNV    G+++   GP+
Sbjct:    3 KVHGSLARAGKVKSQTPKVEKTEKPKKPKGRAYKRLLYTRRFVNVTLVNGKRRMNPGPS 61          
BLAST of 40S ribosomal protein S30 vs. Ensembl Nematostella
Match: EDO33252 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSR0])

HSP 1 Score: 120.168 bits (300), Expect = 1.175e-35
Identity = 70/133 (52.63%), Postives = 89/133 (66.92%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSS--LGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ +           G ++V  +K  LA +D +P+ D   L +G  L++ + L    L    T+D+ V L GGKVHGSLARAGKVK+QTPKVD QEK+K+  GRAKRRMQYNRRFVNVV T GR++GPNSNA
Sbjct:    1 MQLFVRGQNLHTLNVEGCDSVLGIKQELALRDGIPVEDQVLLYAGRPLEDGMSLEECELFDQVTLDLGVRLLGGKVHGSLARAGKVKSQTPKVDAQEKKKKKTGRAKRRMQYNRRFVNVVQTFGRRRGPNSNA 133          
BLAST of 40S ribosomal protein S30 vs. Ensembl Medaka
Match: faua (FAU ubiquitin like and ribosomal protein S30 fusion [Source:NCBI gene;Acc:100049366])

HSP 1 Score: 112.849 bits (281), Expect = 2.264e-32
Identity = 69/133 (51.88%), Postives = 94/133 (70.68%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVS--LKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNA 452
            MQ+ + +  +   E TG+ETV  +K  +   + + + D   +L+G  L+++  L S GV+    +EV+  L GGKVHGSLARAGKV+ QTPKVDKQEK+K+  GRAKRR+QYNRRFVNVV T G+KKGPN+N+
Sbjct:    1 MQLFLRAQNTHTLEVTGEETVGQIKAHVQTLEGILVEDQVLMLTGCPLEDDASLVSCGVSEFCTLEVAGRLLGGKVHGSLARAGKVRGQTPKVDKQEKKKKKTGRAKRRIQYNRRFVNVVPTFGKKKGPNANS 133          
BLAST of 40S ribosomal protein S30 vs. Planmine SMEST
Match: SMESG000065562.1 (SMESG000065562.1)

HSP 1 Score: 269.626 bits (688), Expect = 1.833e-94
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 3
Query:   60 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNAK 455
            MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNAK
Sbjct:    1 MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDNEIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQPRGRAKRRMQYNRRFVNVVTTQGRKKGPNSNAK 132          
The following BLAST results are available for this feature:
BLAST of 40S ribosomal protein S30 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
FAU7.650e-3654.14FAU ubiquitin like and ribosomal protein S30 fusio... [more]
FAU7.650e-3654.14FAU ubiquitin like and ribosomal protein S30 fusio... [more]
FAU7.650e-3654.14FAU ubiquitin like and ribosomal protein S30 fusio... [more]
FAU2.663e-2546.56FAU ubiquitin like and ribosomal protein S30 fusio... [more]
FAU2.909e-1948.15FAU ubiquitin like and ribosomal protein S30 fusio... [more]
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BLAST of 40S ribosomal protein S30 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rps-301.216e-2243.6140S ribosomal protein S30 [Source:UniProtKB/TrEMB... [more]
rps-301.216e-2243.6140S ribosomal protein S30 [Source:UniProtKB/TrEMB... [more]
rps-301.216e-2243.6140S ribosomal protein S30 [Source:UniProtKB/TrEMB... [more]
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BLAST of 40S ribosomal protein S30 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
RpS304.764e-2646.97gene:FBgn0038834 transcript:FBtr0346148[more]
RpS304.764e-2646.97gene:FBgn0038834 transcript:FBtr0083969[more]
RpS304.764e-2646.97gene:FBgn0038834 transcript:FBtr0083970[more]
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BLAST of 40S ribosomal protein S30 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
faub3.707e-3651.88FAU ubiquitin like and ribosomal protein S30 fusio... [more]
faub3.707e-3651.88FAU ubiquitin like and ribosomal protein S30 fusio... [more]
faub6.530e-3651.88FAU ubiquitin like and ribosomal protein S30 fusio... [more]
faua2.189e-3152.63FAU ubiquitin like and ribosomal protein S30 fusio... [more]
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BLAST of 40S ribosomal protein S30 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
fau3.914e-3251.88Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuS... [more]
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BLAST of 40S ribosomal protein S30 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Fau3.098e-3554.14Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuS... [more]
Fau3.098e-3554.14Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuS... [more]
Fau3.098e-3554.14Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuS... [more]
Fau3.098e-3554.14Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuS... [more]
Fau3.098e-3554.14Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuS... [more]
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BLAST of 40S ribosomal protein S30 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9W6Y0|RS30_ORYLA7.336e-2071.1940S ribosomal protein S30 OS=Oryzias latipes OX=80... [more]
sp|P62864|RS30_RAT3.488e-1979.6640S ribosomal protein S30 OS=Rattus norvegicus OX=... [more]
sp|P0C2F0|RS30_PONAB3.488e-1979.6640S ribosomal protein S30 OS=Pongo abelii OX=9601 ... [more]
sp|P62863|RS30_PIG3.488e-1979.6640S ribosomal protein S30 OS=Sus scrofa OX=9823 GN... [more]
sp|P62867|RS30_MUSSI3.488e-1979.6640S ribosomal protein S30 OS=Mus spicilegus OX=101... [more]
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BLAST of 40S ribosomal protein S30 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0R3W5B21.395e-4253.3840S ribosomal protein S30 OS=Taenia asiatica OX=60... [more]
A0A068Y8372.628e-4254.1440S ribosomal protein S30 OS=Echinococcus multiloc... [more]
A0A183N0F63.607e-4255.6440S ribosomal protein S30 OS=Schistosoma margrebow... [more]
A0A068WER27.580e-4252.6340S ribosomal protein S30 OS=Echinococcus granulos... [more]
A0A0R3U6W88.272e-4255.6440S ribosomal protein S30 OS=Mesocestoides corti O... [more]
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BLAST of 40S ribosomal protein S30 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
faua5.727e-3353.38FAU ubiquitin like and ribosomal protein S30 fusio... [more]
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BLAST of 40S ribosomal protein S30 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of 40S ribosomal protein S30 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2
Match NameE-valueIdentityDescription
RPS30B9.716e-1462.71Protein component of the small (40S) ribosomal sub... [more]
RPS30A9.716e-1462.71Protein component of the small (40S) ribosomal sub... [more]
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BLAST of 40S ribosomal protein S30 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO332521.175e-3552.63Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 40S ribosomal protein S30 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
faua2.264e-3251.88FAU ubiquitin like and ribosomal protein S30 fusio... [more]
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BLAST of 40S ribosomal protein S30 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000065562.11.833e-94100.00SMESG000065562.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30031916 ID=SMED30031916|Name=40S ribosomal protein S30|organism=Schmidtea mediterranea sexual|type=transcript|length=485bp
CTTAGAATGAAAATATTTGTTTAAATTACCAAAGAAAAGCTATATTAAAA
ATTTCAAAAATGCAAATTATTATTAATAGCGTTGAATCTTTTATCCATGA
ATGTACTGGCGATGAAACTGTTGCCGATTTAAAAGTTTTTTTGGCTAATA
AAGACCAACTTCCATTAACTGATATCAAATGTTTATTAAGTGGAAATATT
CTTGACAATGAAATTGTTTTGTCATCATTGGGTGTTAATCCAACCATTGA
TATTGAAGTATCACTTAAGGGAGGTAAAGTTCATGGTTCTTTAGCTCGTG
CTGGTAAAGTCAAAAATCAAACACCAAAAGTTGACAAACAAGAAAAAAGA
AAACAACCACGTGGTCGGGCAAAGAGACGTATGCAATATAACAGAAGATT
TGTTAATGTTGTAACTACTCAAGGTAGAAAGAAGGGACCTAACTCAAATG
CTAAGTGATTGAATAAATAAATTTGGATTTAATTT
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protein sequence of SMED30031916-orf-1

>SMED30031916-orf-1 ID=SMED30031916-orf-1|Name=SMED30031916-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=133bp
MQIIINSVESFIHECTGDETVADLKVFLANKDQLPLTDIKCLLSGNILDN
EIVLSSLGVNPTIDIEVSLKGGKVHGSLARAGKVKNQTPKVDKQEKRKQP
RGRAKRRMQYNRRFVNVVTTQGRKKGPNSNAK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000120progenitor cell
PLANA:0000429neoblast
PLANA:0002032epidermal cell
PLANA:0002109X1 cell
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR006846Ribosomal_S30
IPR000626Ubiquitin-like_dom
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0005515protein binding
Vocabulary: biological process
TermDefinition
GO:0006412translation
Vocabulary: cellular component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 11..120
e-value: 2.5E-6
score: 29.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..150
NoneNo IPR availablePANTHERPTHR1265040S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBIcoord: 11..149
NoneNo IPR availablePANTHERPTHR12650:SF1540S RIBOSOMAL PROTEIN S30coord: 11..149
NoneNo IPR availableCDDcd01793Ubl_FUBIcoord: 19..90
e-value: 1.02602E-12
score: 57.6771
IPR006846Ribosomal protein S30PFAMPF04758Ribosomal_S30coord: 91..148
e-value: 4.5E-30
score: 103.6
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 19..88
score: 11.703
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 20..112