La ribonucleoprotein domain family member 1B
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30031888 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Human
Match: LARP1B (La ribonucleoprotein 1B [Source:HGNC Symbol;Acc:HGNC:24704]) HSP 1 Score: 204.142 bits (518), Expect = 2.091e-53 Identity = 112/240 (46.67%), Postives = 153/240 (63.75%), Query Frame = 1 Query: 2248 FYPVTKVGPA---KDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGI---PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLE-VHSKIKKLLEKYKTLEDFRMNVKQREKF 2946 FYPV K A K K KTR S +P +E VG+ +VS S S A A ++G P HPS LL+ENGF + Y+++R+ L++R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ AWEDA + YRYG+ECLFR ++Y LE K F + +QDFQ+ KD +S LYGLEKFWA+LKYS K + + K+++ L +K LEDFR++ ++F Sbjct: 619 FYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSRDRGPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRRCLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFRFYSYGLE--KKFRREIFQDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTQSIDPKLQEYLCSFKRLEDFRVDPPISDEF 856
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Human
Match: LARP1B (La ribonucleoprotein 1B [Source:HGNC Symbol;Acc:HGNC:24704]) HSP 1 Score: 204.912 bits (520), Expect = 2.902e-53 Identity = 112/240 (46.67%), Postives = 153/240 (63.75%), Query Frame = 1 Query: 2248 FYPVTKVGPA---KDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGI---PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLE-VHSKIKKLLEKYKTLEDFRMNVKQREKF 2946 FYPV K A K K KTR S +P +E VG+ +VS S S A A ++G P HPS LL+ENGF + Y+++R+ L++R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ AWEDA + YRYG+ECLFR ++Y LE K F + +QDFQ+ KD +S LYGLEKFWA+LKYS K + + K+++ L +K LEDFR++ ++F Sbjct: 820 FYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSRDRGPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRRCLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFRFYSYGLE--KKFRREIFQDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTQSIDPKLQEYLCSFKRLEDFRVDPPISDEF 1057
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Human
Match: LARP1 (La ribonucleoprotein 1, translational regulator [Source:HGNC Symbol;Acc:HGNC:29531]) HSP 1 Score: 203.756 bits (517), Expect = 5.452e-53 Identity = 109/230 (47.39%), Postives = 149/230 (64.78%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPV K G AK K KTR S +P +E VG+ + R ++S S G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A EDA +GYRYG+ECLFR ++Y LE K F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K L++ K+++ L K++ LEDFR++ Sbjct: 723 FYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLE--KKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVD 950
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Celegans
Match: larp-1 (La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]) HSP 1 Score: 149.828 bits (377), Expect = 2.671e-36 Identity = 103/243 (42.39%), Postives = 134/243 (55.14%), Query Frame = 1 Query: 2248 FYPVTK-VGP--AKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIP-----IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIG-RSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS--GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREK 2943 FYP++K P AK K KTR S P VE V + DA A GI +P N HPS LLQE+ F Y+ +R+ L ++RK +G EMNTL+RFWSFFLR+N ++ MYEEF+K A EDA G RYG+E LFR ++Y LE K F + Y++F K+V D+ LYGLEK +AFL+ S K+L V + K L KYK+ +DFR N+ Q K Sbjct: 931 FYPISKPTAPLDAKSPRKKKTRHSEKPPVEMPVAWVLG------------------REDALPAAPIGIAASSSQVPAN-HPSISLLQEDRFVQNVYSTWRQACL--KQRKSLGYDCAEMNTLYRFWSFFLRDNFNRNMYEEFRKLALEDAEIGSRYGIEALFRFYSYGLE--KKFRPEIYKNFMKDVTTDVQKGELYGLEKLFAFLQRSKIAKQLVVDDYLTKELNKYKSTDDFR-NLPQSTK 1149
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Celegans
Match: larp-1 (La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]) HSP 1 Score: 149.828 bits (377), Expect = 2.671e-36 Identity = 103/243 (42.39%), Postives = 134/243 (55.14%), Query Frame = 1 Query: 2248 FYPVTK-VGP--AKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIP-----IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIG-RSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS--GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREK 2943 FYP++K P AK K KTR S P VE V + DA A GI +P N HPS LLQE+ F Y+ +R+ L ++RK +G EMNTL+RFWSFFLR+N ++ MYEEF+K A EDA G RYG+E LFR ++Y LE K F + Y++F K+V D+ LYGLEK +AFL+ S K+L V + K L KYK+ +DFR N+ Q K Sbjct: 931 FYPISKPTAPLDAKSPRKKKTRHSEKPPVEMPVAWVLG------------------REDALPAAPIGIAASSSQVPAN-HPSISLLQEDRFVQNVYSTWRQACL--KQRKSLGYDCAEMNTLYRFWSFFLRDNFNRNMYEEFRKLALEDAEIGSRYGIEALFRFYSYGLE--KKFRPEIYKNFMKDVTTDVQKGELYGLEKLFAFLQRSKIAKQLVVDDYLTKELNKYKSTDDFR-NLPQSTK 1149
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Celegans
Match: larp-1 (La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]) HSP 1 Score: 147.517 bits (371), Expect = 5.791e-36 Identity = 103/243 (42.39%), Postives = 134/243 (55.14%), Query Frame = 1 Query: 2248 FYPVTK-VGP--AKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIP-----IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIG-RSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS--GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREK 2943 FYP++K P AK K KTR S P VE V + DA A GI +P N HPS LLQE+ F Y+ +R+ L ++RK +G EMNTL+RFWSFFLR+N ++ MYEEF+K A EDA G RYG+E LFR ++Y LE K F + Y++F K+V D+ LYGLEK +AFL+ S K+L V + K L KYK+ +DFR N+ Q K Sbjct: 599 FYPISKPTAPLDAKSPRKKKTRHSEKPPVEMPVAWVLG------------------REDALPAAPIGIAASSSQVPAN-HPSISLLQEDRFVQNVYSTWRQACL--KQRKSLGYDCAEMNTLYRFWSFFLRDNFNRNMYEEFRKLALEDAEIGSRYGIEALFRFYSYGLE--KKFRPEIYKNFMKDVTTDVQKGELYGLEKLFAFLQRSKIAKQLVVDDYLTKELNKYKSTDDFR-NLPQSTK 817
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Celegans
Match: larp-5 (LARP (RNA binding La related protein) homolog [Source:UniProtKB/TrEMBL;Acc:H2KZU0]) HSP 1 Score: 50.447 bits (119), Expect = 7.246e-6 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 676 EIMYVRANVLSYYFSEMNLFNDKYLMSIMDDDGWVNLDILLKFPRLLKTKTTMQDVSNIVSNIK 867 EI + N L YYFS NL +D+YL MD D +V +++L FP++++ T DV IV +K Sbjct: 39 EIKQLLKNQLEYYFSRENLSSDRYLKCQMDSDNYVPINVLAGFPKIMRLTT---DVDLIVEALK 99
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Celegans
Match: larp-5 (LARP (RNA binding La related protein) homolog [Source:UniProtKB/TrEMBL;Acc:H2KZU0]) HSP 1 Score: 50.447 bits (119), Expect = 7.246e-6 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 676 EIMYVRANVLSYYFSEMNLFNDKYLMSIMDDDGWVNLDILLKFPRLLKTKTTMQDVSNIVSNIK 867 EI + N L YYFS NL +D+YL MD D +V +++L FP++++ T DV IV +K Sbjct: 39 EIKQLLKNQLEYYFSRENLSSDRYLKCQMDSDNYVPINVLAGFPKIMRLTT---DVDLIVEALK 99
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Fly
Match: larp (gene:FBgn0261618 transcript:FBtr0089680) HSP 1 Score: 192.2 bits (487), Expect = 1.092e-49 Identity = 103/218 (47.25%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 2290 KDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGS-----TYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKY--SGKKLEVHSKIKKLLEKYKTLEDFRM 2922 K K R + +P VE VG+ + R ++ S T S Y G +V +P+ F HPS LL+EN F + Y+++ L +R R G G+SQEMNTL+RFWSFFLREN +K MY EF+ A EDA G+RYG+ECLFR F+Y LE K F YQDFQ + D ++ LYGLEKFWAFLKY +G+KLEV K+ + L+ +K +EDFR+ Sbjct: 563 KRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAGTSPTASSYGSFGSSVPQSLPV-FQ-HPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLE--KKFRPNIYQDFQDETIADYETGQLYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDFRV 776
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Fly
Match: larp (gene:FBgn0261618 transcript:FBtr0301181) HSP 1 Score: 192.2 bits (487), Expect = 1.092e-49 Identity = 103/218 (47.25%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 2290 KDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGS-----TYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKY--SGKKLEVHSKIKKLLEKYKTLEDFRM 2922 K K R + +P VE VG+ + R ++ S T S Y G +V +P+ F HPS LL+EN F + Y+++ L +R R G G+SQEMNTL+RFWSFFLREN +K MY EF+ A EDA G+RYG+ECLFR F+Y LE K F YQDFQ + D ++ LYGLEKFWAFLKY +G+KLEV K+ + L+ +K +EDFR+ Sbjct: 563 KRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAGTSPTASSYGSFGSSVPQSLPV-FQ-HPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLE--KKFRPNIYQDFQDETIADYETGQLYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDFRV 776
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Fly
Match: larp (gene:FBgn0261618 transcript:FBtr0089682) HSP 1 Score: 192.2 bits (487), Expect = 1.092e-49 Identity = 103/218 (47.25%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 2290 KDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGS-----TYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKY--SGKKLEVHSKIKKLLEKYKTLEDFRM 2922 K K R + +P VE VG+ + R ++ S T S Y G +V +P+ F HPS LL+EN F + Y+++ L +R R G G+SQEMNTL+RFWSFFLREN +K MY EF+ A EDA G+RYG+ECLFR F+Y LE K F YQDFQ + D ++ LYGLEKFWAFLKY +G+KLEV K+ + L+ +K +EDFR+ Sbjct: 563 KRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAGTSPTASSYGSFGSSVPQSLPV-FQ-HPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLE--KKFRPNIYQDFQDETIADYETGQLYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDFRV 776
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Fly
Match: larp (gene:FBgn0261618 transcript:FBtr0306388) HSP 1 Score: 192.2 bits (487), Expect = 2.424e-49 Identity = 103/218 (47.25%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 2290 KDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGS-----TYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKY--SGKKLEVHSKIKKLLEKYKTLEDFRM 2922 K K R + +P VE VG+ + R ++ S T S Y G +V +P+ F HPS LL+EN F + Y+++ L +R R G G+SQEMNTL+RFWSFFLREN +K MY EF+ A EDA G+RYG+ECLFR F+Y LE K F YQDFQ + D ++ LYGLEKFWAFLKY +G+KLEV K+ + L+ +K +EDFR+ Sbjct: 1007 KRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAGTSPTASSYGSFGSSVPQSLPV-FQ-HPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLE--KKFRPNIYQDFQDETIADYETGQLYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDFRV 1220
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Fly
Match: larp (gene:FBgn0261618 transcript:FBtr0306389) HSP 1 Score: 192.2 bits (487), Expect = 2.826e-49 Identity = 103/218 (47.25%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 2290 KDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGS-----TYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKY--SGKKLEVHSKIKKLLEKYKTLEDFRM 2922 K K R + +P VE VG+ + R ++ S T S Y G +V +P+ F HPS LL+EN F + Y+++ L +R R G G+SQEMNTL+RFWSFFLREN +K MY EF+ A EDA G+RYG+ECLFR F+Y LE K F YQDFQ + D ++ LYGLEKFWAFLKY +G+KLEV K+ + L+ +K +EDFR+ Sbjct: 1271 KRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAGTSPTASSYGSFGSSVPQSLPV-FQ-HPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLE--KKFRPNIYQDFQDETIADYETGQLYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDFRV 1484
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Zebrafish
Match: larp1 (La ribonucleoprotein 1, translational regulator [Source:ZFIN;Acc:ZDB-GENE-030131-5386]) HSP 1 Score: 201.445 bits (511), Expect = 1.525e-52 Identity = 107/232 (46.12%), Postives = 150/232 (64.66%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIP--IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPV K G AK K KTR S +P +E VG+ + SR +VS + A P +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +++MYEEF++ + ED +GYRYG+ECLFR ++Y LE + F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K +E+ K+++ L K++ LEDFR++ Sbjct: 679 FYPVVKDGRPLDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRSRTASVSSNASPSEGTAAMGNFGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLSVEDGKEGYRYGLECLFRFYSYGLE--RKFRPDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKTKNMEIEPKLQEHLSKFRRLEDFRVD 908
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Zebrafish
Match: larp1b (La ribonucleoprotein 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]) HSP 1 Score: 185.652 bits (470), Expect = 1.257e-49 Identity = 105/236 (44.49%), Postives = 150/236 (63.56%), Query Frame = 1 Query: 2248 FYPVTKVGPA----KDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHG----IP--IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSG-KKLEVHSKIKKLLEKYKTLEDFRM 2922 FYPV K K K KTR S +P +E VG+ + R RT S S+ + G G P +P HPS LL+ENGF + Y+++R+ L +R+R G+G+SQEMNTLFRFWSFFLR+N +++MYEEF+++A ED+ + YRYG+ECLFR ++Y LE + F ++DFQ+ ++D + LYGLEKFWAFLKYS K ++ K+K+ L K+K+++DFR+ Sbjct: 172 FYPVIKEDSGNLDGKTPRKRKTRHSSNPPLECHVGWVMDSREH--RPRTSSISSSNASPSEGAPALSGSYGCTPQSLPKFWHPSHELLRENGFTQQVYHKYRRRCLNERKRLGVGQSQEMNTLFRFWSFFLRDNFNRKMYEEFRQFAVEDSKENYRYGLECLFRFYSYGLE--RRFRPDIFKDFQEETVQDYEKGQLYGLEKFWAFLKYSKVKNQDIDPKLKEYLSKFKSIDDFRV 403
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Zebrafish
Match: larp1b (La ribonucleoprotein 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]) HSP 1 Score: 189.504 bits (480), Expect = 1.469e-48 Identity = 105/236 (44.49%), Postives = 150/236 (63.56%), Query Frame = 1 Query: 2248 FYPVTKVGPA----KDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHG----IP--IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSG-KKLEVHSKIKKLLEKYKTLEDFRM 2922 FYPV K K K KTR S +P +E VG+ + R RT S S+ + G G P +P HPS LL+ENGF + Y+++R+ L +R+R G+G+SQEMNTLFRFWSFFLR+N +++MYEEF+++A ED+ + YRYG+ECLFR ++Y LE + F ++DFQ+ ++D + LYGLEKFWAFLKYS K ++ K+K+ L K+K+++DFR+ Sbjct: 718 FYPVIKEDSGNLDGKTPRKRKTRHSSNPPLECHVGWVMDSREH--RPRTSSISSSNASPSEGAPALSGSYGCTPQSLPKFWHPSHELLRENGFTQQVYHKYRRRCLNERKRLGVGQSQEMNTLFRFWSFFLRDNFNRKMYEEFRQFAVEDSKENYRYGLECLFRFYSYGLE--RRFRPDIFKDFQEETVQDYEKGQLYGLEKFWAFLKYSKVKNQDIDPKLKEYLSKFKSIDDFRV 949
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Zebrafish
Match: AL928908.4 (pep chromosome:GRCz11:CHR_ALT_CTG17_1_22:26792344:26800858:1 gene:ENSDARG00000113142.1 transcript:ENSDART00000193866.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AL928908.4) HSP 1 Score: 172.17 bits (435), Expect = 2.056e-48 Identity = 83/160 (51.88%), Postives = 121/160 (75.62%), Query Frame = 1 Query: 2461 HPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSG-KKLEVHSKIKKLLEKYKTLEDFRMNVKQR 2937 HPS LL+ENGF + Y+++R+ L +R+R G+G+SQEMNTLFRFWSFFLR+N +++MYEEF+++A ED+ + YRYG+ECLFR ++Y LE + F ++DFQ+ ++D + LYGLEKFWAFLKYS K ++ K+K+ L K+K+++DFR+ V R Sbjct: 43 HPSHELLRENGFTQQVYHKYRRRCLNERKRLGVGQSQEMNTLFRFWSFFLRDNFNRKMYEEFRQFAVEDSKENYRYGLECLFRFYSYGLE--RRFRPDIFKDFQEETVQDYEKGQLYGLEKFWAFLKYSKVKNQDIDPKLKEYLSKFKSIDDFRVEVSIR 200
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Xenopus
Match: larp1 (La ribonucleoprotein domain family member 1 [Source:NCBI gene;Acc:100216225]) HSP 1 Score: 199.134 bits (505), Expect = 1.425e-52 Identity = 111/234 (47.44%), Postives = 152/234 (64.96%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGI---PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMNV 2928 FYPV K G AK K KTR S +P +E VG+ + R +VS ST S A +G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A ED+ +GYRYG+ECLFR ++Y LE K F ++DFQ+ +D ++ LYGLEKFWAFLKYS K L++ +++ L K++ LEDFR++V Sbjct: 442 FYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASVS-STASPSEVAPALSNYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAVEDSKEGYRYGLECLFRYYSYGLE--KKFRVDIFRDFQEETRRDYETGQLYGLEKFWAFLKYSKAKNLDIDPILQEYLSKFRRLEDFRVDV 672
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Xenopus
Match: larp1 (La ribonucleoprotein domain family member 1 [Source:NCBI gene;Acc:100216225]) HSP 1 Score: 196.438 bits (498), Expect = 8.744e-51 Identity = 110/233 (47.21%), Postives = 151/233 (64.81%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGI---PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPV K G AK K KTR S +P +E VG+ + R +VS ST S A +G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A ED+ +GYRYG+ECLFR ++Y LE K F ++DFQ+ +D ++ LYGLEKFWAFLKYS K L++ +++ L K++ LEDFR++ Sbjct: 661 FYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASVS-STASPSEVAPALSNYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAVEDSKEGYRYGLECLFRYYSYGLE--KKFRVDIFRDFQEETRRDYETGQLYGLEKFWAFLKYSKAKNLDIDPILQEYLSKFRRLEDFRVD 890
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Xenopus
Match: larp1 (La ribonucleoprotein domain family member 1 [Source:NCBI gene;Acc:100216225]) HSP 1 Score: 194.897 bits (494), Expect = 2.549e-50 Identity = 107/230 (46.52%), Postives = 148/230 (64.35%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPV K G AK K KTR S +P +E VG+ + R +VS S + +P F HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A ED+ +GYRYG+ECLFR ++Y LE K F ++DFQ+ +D ++ LYGLEKFWAFLKYS K L++ +++ L K++ LEDFR++ Sbjct: 671 FYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASVSPSEVAPALSNYGCTPQSLPK-FQ-HPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAVEDSKEGYRYGLECLFRYYSYGLE--KKFRVDIFRDFQEETRRDYETGQLYGLEKFWAFLKYSKAKNLDIDPILQEYLSKFRRLEDFRVD 896
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Xenopus
Match: inpp5d (inositol polyphosphate-5-phosphatase D [Source:Xenbase;Acc:XB-GENE-6071358]) HSP 1 Score: 192.2 bits (487), Expect = 4.371e-50 Identity = 111/260 (42.69%), Postives = 162/260 (62.31%), Query Frame = 1 Query: 2215 MKKPKRACKVGFYPVTKVGPAKD---KLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGI---PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFFLIFYWILL 2973 +K P + + FYPV K + D K KTR S +P +EY VG+ + R +VS S S A ++G +P HPS LL+ENGF + Y+++R+ L +R++ G+G+S EMNTL+RFWSFFLR++ +K+MYEEF++ A E+A + YRYG+ECLFR ++Y LE + F ++ ++DFQ+ +KD + LYGLEKFWA+LKYS K L V K++ L K+K LEDFR++V F + + LL Sbjct: 483 LKDPSKTPR--FYPVVKEARSIDVQSPRKRKTRHSTNPPLEYHVGWVMDSKEHRPRTSSVSSSNASPSEVAPLTGSYGCTPHSLPKFQHPSHELLKENGFTQQVYHKYRRRCLNERKKLGVGQSPEMNTLYRFWSFFLRDHFNKKMYEEFRQLAVEEAKENYRYGLECLFRFYSYGLE--RKFRQELFEDFQEETVKDYEHGQLYGLEKFWAYLKYSKAKNLSVDPKLQSYLSKFKRLEDFRVDVSLHCLFKEMIHGCLL 738
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Xenopus
Match: larp1 (La ribonucleoprotein domain family member 1 [Source:NCBI gene;Acc:100216225]) HSP 1 Score: 194.126 bits (492), Expect = 5.208e-50 Identity = 107/230 (46.52%), Postives = 148/230 (64.35%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPV K G AK K KTR S +P +E VG+ + R +VS S + +P F HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A ED+ +GYRYG+ECLFR ++Y LE K F ++DFQ+ +D ++ LYGLEKFWAFLKYS K L++ +++ L K++ LEDFR++ Sbjct: 730 FYPVVKEGRTIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASVSPSEVAPALSNYGCTPQSLPK-FQ-HPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAVEDSKEGYRYGLECLFRYYSYGLE--KKFRVDIFRDFQEETRRDYETGQLYGLEKFWAFLKYSKAKNLDIDPILQEYLSKFRRLEDFRVD 955
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Mouse
Match: Larp1 (La ribonucleoprotein domain family, member 1 [Source:MGI Symbol;Acc:MGI:1890165]) HSP 1 Score: 203.371 bits (516), Expect = 6.583e-53 Identity = 110/236 (46.61%), Postives = 151/236 (63.98%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREK 2943 FYPV K G AK K KTR S +P +E VG+ + R ++S S G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A EDA +GYRYG+ECLFR ++Y LE K F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K L++ K+++ L K++ LEDFR++ E+ Sbjct: 777 FYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLE--KKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEE 1010
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Mouse
Match: Larp1 (La ribonucleoprotein domain family, member 1 [Source:MGI Symbol;Acc:MGI:1890165]) HSP 1 Score: 202.986 bits (515), Expect = 6.700e-53 Identity = 110/236 (46.61%), Postives = 151/236 (63.98%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREK 2943 FYPV K G AK K KTR S +P +E VG+ + R ++S S G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A EDA +GYRYG+ECLFR ++Y LE K F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K L++ K+++ L K++ LEDFR++ E+ Sbjct: 777 FYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLE--KKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEE 1010
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Mouse
Match: Larp1b (La ribonucleoprotein domain family, member 1B [Source:MGI Symbol;Acc:MGI:1914604]) HSP 1 Score: 178.718 bits (452), Expect = 3.706e-50 Identity = 87/163 (53.37%), Postives = 126/163 (77.30%), Query Frame = 1 Query: 2461 HPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLE-VHSKIKKLLEKYKTLEDFRMNVKQREKF 2946 HPS LL+ENGF + Y+ +R++ L++R+R GIG+SQEMNTLFRFWSFFLR++ + +MYEEF++ AWEDA + YRYG+ECLFR ++Y LE K+F ++ ++DFQ+ KD +S LYGLEKFWA+L+YS K + V K+++ L ++K LEDFR+++ E+F Sbjct: 42 HPSYELLKENGFTQQLYHRYRRKCLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNWKMYEEFRQLAWEDAKENYRYGLECLFRFYSYGLE--KNFRKEIFKDFQEETKKDYESGQLYGLEKFWAYLEYSQSKTQPVDPKLQEYLSRFKKLEDFRVDLPSSEEF 202
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Mouse
Match: Larp1b (La ribonucleoprotein domain family, member 1B [Source:MGI Symbol;Acc:MGI:1914604]) HSP 1 Score: 52.373 bits (124), Expect = 8.507e-8 Identity = 24/51 (47.06%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 2797 SNHLYGLEKFWAFLKYSGKKLE-VHSKIKKLLEKYKTLEDFRMNVKQREKF 2946 + LYGLEKFWA+L+YS K + V K+++ L ++K LEDFR+++ E+F Sbjct: 6 TGQLYGLEKFWAYLEYSQSKTQPVDPKLQEYLSRFKKLEDFRVDLPSSEEF 56
BLAST of La ribonucleoprotein domain family member 1B vs. UniProt/SwissProt
Match: sp|Q659C4|LAR1B_HUMAN (La-related protein 1B OS=Homo sapiens OX=9606 GN=LARP1B PE=1 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 1.004e-52 Identity = 112/240 (46.67%), Postives = 153/240 (63.75%), Query Frame = 1 Query: 2248 FYPVTKVGPA---KDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGI---PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLE-VHSKIKKLLEKYKTLEDFRMNVKQREKF 2946 FYPV K A K K KTR S +P +E VG+ +VS S S A A ++G P HPS LL+ENGF + Y+++R+ L++R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ AWEDA + YRYG+ECLFR ++Y LE K F + +QDFQ+ KD +S LYGLEKFWA+LKYS K + + K+++ L +K LEDFR++ ++F Sbjct: 619 FYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSRDRGPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRRCLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFRFYSYGLE--KKFRREIFQDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTQSIDPKLQEYLCSFKRLEDFRVDPPISDEF 856
BLAST of La ribonucleoprotein domain family member 1B vs. UniProt/SwissProt
Match: sp|Q6PKG0|LARP1_HUMAN (La-related protein 1 OS=Homo sapiens OX=9606 GN=LARP1 PE=1 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 3.825e-52 Identity = 109/230 (47.39%), Postives = 149/230 (64.78%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPV K G AK K KTR S +P +E VG+ + R ++S S G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A EDA +GYRYG+ECLFR ++Y LE K F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K L++ K+++ L K++ LEDFR++ Sbjct: 800 FYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPTVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLE--KKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVD 1027
BLAST of La ribonucleoprotein domain family member 1B vs. UniProt/SwissProt
Match: sp|Q6ZQ58|LARP1_MOUSE (La-related protein 1 OS=Mus musculus OX=10090 GN=Larp1 PE=1 SV=3) HSP 1 Score: 202.986 bits (515), Expect = 4.687e-52 Identity = 110/236 (46.61%), Postives = 151/236 (63.98%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREK 2943 FYPV K G AK K KTR S +P +E VG+ + R ++S S G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A EDA +GYRYG+ECLFR ++Y LE K F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K L++ K+++ L K++ LEDFR++ E+ Sbjct: 777 FYPVVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLE--KKFRLDIFKDFQEETVKDYEAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEE 1010
BLAST of La ribonucleoprotein domain family member 1B vs. UniProt/SwissProt
Match: sp|Q9VAW5|LARP_DROME (La-related protein 1 OS=Drosophila melanogaster OX=7227 GN=larp PE=1 SV=5) HSP 1 Score: 192.2 bits (487), Expect = 2.833e-48 Identity = 103/218 (47.25%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 2290 KDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGS-----TYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKY--SGKKLEVHSKIKKLLEKYKTLEDFRM 2922 K K R + +P VE VG+ + R ++ S T S Y G +V +P+ F HPS LL+EN F + Y+++ L +R R G G+SQEMNTL+RFWSFFLREN +K MY EF+ A EDA G+RYG+ECLFR F+Y LE K F YQDFQ + D ++ LYGLEKFWAFLKY +G+KLEV K+ + L+ +K +EDFR+ Sbjct: 1271 KRKLRHTANPPVEAHVGWLLDTVEHRPRTTSMGSSAGTSPTASSYGSFGSSVPQSLPV-FQ-HPSHALLKENNFTQQAYHKYHSRCLKERRRLGYGQSQEMNTLYRFWSFFLRENFNKSMYNEFRSLALEDAGNGFRYGLECLFRFFSYGLE--KKFRPNIYQDFQDETIADYETGQLYGLEKFWAFLKYYKNGEKLEVQPKLAEYLKSFKNIEDFRV 1484
BLAST of La ribonucleoprotein domain family member 1B vs. UniProt/SwissProt
Match: sp|Q940X9|LRP1A_ARATH (La-related protein 1A OS=Arabidopsis thaliana OX=3702 GN=LARP1A PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.124e-36 Identity = 79/161 (49.07%), Postives = 112/161 (69.57%), Query Frame = 1 Query: 2449 PFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEV--HSKIKKLL-EKYKTLEDFRM 2922 PF HPS LL+ENGF+ + Y ++RK L +R++ G G S+EMN L+RFWS+FLR+ MY++FQK+A EDA Y YG+ECLFR ++Y LE KHF E Y+DF+K L +LYGLEK+WAF Y GK+ + H +++KLL E++++++DFR Sbjct: 656 PFQ-HPSHQLLEENGFKQEKYLKYRKRCLNERKKLGSGCSEEMNHLYRFWSYFLRDTFVLSMYDDFQKFALEDAAGNYDYGLECLFRFYSYGLE--KHFDEDLYKDFEKLSLDFYHKGNLYGLEKYWAFHHYRGKEEPITKHPELEKLLKEEFRSIDDFRA 813
BLAST of La ribonucleoprotein domain family member 1B vs. TrEMBL
Match: A0A504YLQ3 (La protein 1 OS=Fasciola gigantica OX=46835 GN=FGIG_03643 PE=4 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 6.256e-58 Identity = 178/556 (32.01%), Postives = 258/556 (46.40%), Query Frame = 1 Query: 1525 NLSQRLLSKHPSGDRHPNPDYQPRSKIQEQLREIISDGLKDWKNNTEVIXXXXXXXXXXXXXDIKVQICQDEKTFKLMQKSLQNYDNSEGTDDPNLPTSIIPIETKVEVMKQKSVNV----MIFKPLPKEMNIDCDFLVESSTSSVVN-----PVQY-NSWSPPFTITDSVNQWLDKL---LENVQYQYLNVGNS-EKLNKAASNLYQLQQM---NTNGNKTAEESRSKLATSEPAQSILINDVRKEMKKPKRACKVGFYPVTKVGPAKDKLKDKTRASLHPVVEYDVGYAYS---------------------------GGYYNSRRRTVS--------GSTY------SQYNDAGYAVAHGIPIP-----------------------FNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFF 2949 N+S RLL+KHPSGDRHPNPDYQ R+K +L + I GL+D+++ SS K+ D T L D SE + +I+ E + E ++Q + +V ++ P N F ++ TS VN P Y NS P + + W+ V + +V S E N + S+ QQ+ N AE SR+ A+S+ + + ++ K+ + GFYP +V K +D E DVG+A+ G S R VS G+T + +++ V +P P F +H S L+ G + Y +R LADRER G G+SQEMNTL+RFWSFFLR+N R+Y+EF++YA EDA GYRYG+ECLFR ++Y LE + F Y+DFQ+ L+D ++ HLYGLEKFWA L YSG+++E+ ++ KLL KY+T+EDFR N + + F+ Sbjct: 466 NISARLLAKHPSGDRHPNPDYQSRAKTNAELLQEIRLGLEDYEHTVR---------RKRYSSICKLGFDGDVNTSDLDDTDSVYSDVSEHSGSYKEKINIVSPE-EFETIRQAASSVSTEAQLYYPDEALTNDSTAFPKDTRTSLTVNSPSSLPFFYPNSLPPAPPSLATTSNWVPPAPLPAYPVCFPQSDVTESNEVYNPSISSSQAEQQLEAENAVAALVAEVSRAAAASSKKTGKKTVEEKKRTTKRAMKRRMTGFYPA-QVQSTGQKKRD----------EMDVGFAFDIDARVPTSQSHSSDATRTSTKAGNDSESGRVRSSRTVVSMASDISTCGTTVIISTAPTDDDESSETVPDQVPTPSQTDVTQHVQRNASTAPGKSSKTFTNHMSMSCLRAGGLTSRHYMRYRAACLADRERAGPGQSQEMNTLYRFWSFFLRDNFFTRIYKEFRRYALEDADAGYRYGLECLFRFYSYGLE--RRFKWSLYKDFQEETLRDYNNGHLYGLEKFWALLHYSGRRVEMDPQLMKLLRKYRTIEDFRANFEVPDGFY 998
BLAST of La ribonucleoprotein domain family member 1B vs. TrEMBL
Match: A0A2D4LTC7 (Uncharacterized protein OS=Micrurus spixii OX=129469 PE=4 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 7.295e-58 Identity = 118/261 (45.21%), Postives = 165/261 (63.22%), Query Frame = 1 Query: 2212 EMKKPKRACKVGFYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFFLIFYWILLKIF 2982 ++K P + + FYPV K G AK K KTR S +P +E VG+ + R ++S S G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A EDA +GYRYG+ECLFR ++Y LE K F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K L++ SK+++ L K++ LEDFR++V FFL+ L+ +F Sbjct: 178 QLKDPTQTPR--FYPVVKEGRLIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASISSSPSEGTPAIGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLE--KKFRPDIFKDFQEETIKDFEAGQLYGLEKFWAFLKYSKAKNLDIDSKLQEYLSKFRRLEDFRVDVGTNYCFFLVIQIFLMVVF 434
BLAST of La ribonucleoprotein domain family member 1B vs. TrEMBL
Match: A0A2D4LTJ2 (HTH La-type RNA-binding domain-containing protein OS=Micrurus spixii OX=129469 PE=4 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 5.499e-57 Identity = 118/261 (45.21%), Postives = 165/261 (63.22%), Query Frame = 1 Query: 2212 EMKKPKRACKVGFYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFFLIFYWILLKIF 2982 ++K P + + FYPV K G AK K KTR S +P +E VG+ + R ++S S G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A EDA +GYRYG+ECLFR ++Y LE K F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K L++ SK+++ L K++ LEDFR++V FFL+ L+ +F Sbjct: 350 QLKDPTQTPR--FYPVVKEGRLIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASISSSPSEGTPAIGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLE--KKFRPDIFKDFQEETIKDFEAGQLYGLEKFWAFLKYSKAKNLDIDSKLQEYLSKFRRLEDFRVDVGTNYCFFLVIQIFLMVVF 606
BLAST of La ribonucleoprotein domain family member 1B vs. TrEMBL
Match: A0A068Y8A2 (Lupus la ribonucleoprotein OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000837200 PE=4 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.711e-56 Identity = 119/251 (47.41%), Postives = 160/251 (63.75%), Query Frame = 1 Query: 2221 KPKRACKVGFYP-------VTKVGPAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFFL 2952 K K+ GF+P +T VG AK T A+ + E VG+ ++ G ++R RTVS S +++ G PF +HPSQ LL+++GF YN+FR L DRE G GRSQEMNTL+RFWSFFLR N ++ MY+EF++Y+ EDA+ G RYG+ECLFR F+Y LE F + + DFQ+ LKD +S HLYGLEKFWA+L YS ++EV K+ ++LEKYKTL DFR+N + + FFL Sbjct: 832 KGKKPTSSGFFPAHYDALNLTNVGGAKRYRTLSTGANSLRIEEPHVGFLFTRGEGSNRSRTVSDCPDSAAAPE-TSLSPGTRDPFAEHPSQQLLRQHGFTFHRYNKFRAACLRDRELHGRGRSQEMNTLYRFWSFFLRVNFNRTMYKEFRRYSTEDALCGSRYGIECLFRFFSYGLEL--RFRQDLFNDFQEETLKDYESRHLYGLEKFWAYLHYSKNRVEVSPKLCEILEKYKTLGDFRVNFQPPDGFFL 1079
BLAST of La ribonucleoprotein domain family member 1B vs. TrEMBL
Match: A0A2D4LT74 (HTH La-type RNA-binding domain-containing protein (Fragment) OS=Micrurus spixii OX=129469 PE=4 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 1.312e-55 Identity = 118/261 (45.21%), Postives = 165/261 (63.22%), Query Frame = 1 Query: 2212 EMKKPKRACKVGFYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFFLIFYWILLKIF 2982 ++K P + + FYPV K G AK K KTR S +P +E VG+ + R ++S S G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +K+MYEEF++ A EDA +GYRYG+ECLFR ++Y LE K F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K L++ SK+++ L K++ LEDFR++V FFL+ L+ +F Sbjct: 482 QLKDPTQTPR--FYPVVKEGRLIDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRPRTASISSSPSEGTPAIGSYGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLE--KKFRPDIFKDFQEETIKDFEAGQLYGLEKFWAFLKYSKAKNLDIDSKLQEYLSKFRRLEDFRVDVGTNYCFFLVIQIFLMVVF 738
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Cavefish
Match: larp1 (La ribonucleoprotein 1, translational regulator [Source:NCBI gene;Acc:103023110]) HSP 1 Score: 203.371 bits (516), Expect = 4.433e-53 Identity = 108/232 (46.55%), Postives = 149/232 (64.22%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIP--IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPVTK G AK K KTR S +P +E +G+ + SR +VS + P +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +++MYEEF++ ED +GYRYG+ECLFR ++Y LE + F ++DFQ+ +KD ++ LYGLEKFWAFLKYS K LE+ K+++ L K+K LEDFR++ Sbjct: 755 FYPVTKEGRPVDAKTPRKRKTRHSSNPPMECHIGWVMDSREHRSRTASVSSNASPSEGTPALGNIGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGKEGYRYGLECLFRYYSYGLE--RKFRPDIFRDFQEETMKDYEAGQLYGLEKFWAFLKYSKAKTLEIDPKLQEYLSKFKRLEDFRVD 984
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Cavefish
Match: larp1b (La ribonucleoprotein 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]) HSP 1 Score: 116.701 bits (291), Expect = 4.719e-26 Identity = 86/235 (36.60%), Postives = 118/235 (50.21%), Query Frame = 1 Query: 2248 FYPVTKVGP---AKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHG----IP--IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEV-HSKIKKLLEKYKTLEDFRM 2922 FYPV K K K KTR S +P +E VG+ + R RT S S+ + G + G P +P HPS LLQENGF + Y+++R+ L +R+R G+G+SQEMNTLFR Y E + Y YG+E FR +K +FQ+ L D + LYGLEKFWAFLKYS K +V K+++ L K+K+++DFR+ Sbjct: 685 FYPVIKDSGNIDGKTPRKRKTRHSSNPPLESHVGWVMDSREH--RPRTNSVSSSNASPSEGAPLQSGSYSCTPQSLPKFWHPSHELLQENGFTQQVYHKYRRRCLNERKRLGVGQSQEMNTLFR--------------------YGLECLFRFYSYGLEKRFRPEIFK-------------EFQEETLNDYEKGQLYGLEKFWAFLKYSHVKNQVIDPKLQECLSKFKSIDDFRV 884
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Sea Lamprey
Match: larp1b (La ribonucleoprotein 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4154]) HSP 1 Score: 192.971 bits (489), Expect = 1.301e-50 Identity = 106/244 (43.44%), Postives = 158/244 (64.75%), Query Frame = 1 Query: 2215 MKKPKRACKVGFYPVTKVGPAKD---KLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGI---PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKK-LEVHSKIKKLLEKYKTLEDFRMN 2925 ++ P R + FYPV K G D K KTR S +P +E VG+ + R +VS S Q A ++G +P HPS +L+ENGF + Y+++ ++ L++R+R G+G+SQEMNTLFRFWSFFLR++ ++RMY+EF++ A ED +GYRYG+ECLFR ++Y LE K + ++DFQ+ ++D ++ LYGLEKFWAFLKYS +K ++ K+++ L K+K LEDFR++ Sbjct: 659 LRDPTRTPR--FYPVIKEGRGIDNQTPRKQKTRHSSNPPLESHVGWVLDSREHRPRTSSVSSSASFQSETPSVAGSYGCTPQSLPKFQHPSHQMLKENGFTQQVYHKYHRKCLSERKRLGVGQSQEMNTLFRFWSFFLRDHFNRRMYDEFKRLALEDGAEGYRYGLECLFRFYSYGLE--KRYRLDIFKDFQEETIRDYEAGELYGLEKFWAFLKYSHQKNADLDPKLQEHLSKFKRLEDFRVD 898
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Nematostella
Match: EDO35368 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLT2]) HSP 1 Score: 189.119 bits (479), Expect = 2.627e-54 Identity = 114/267 (42.70%), Postives = 158/267 (59.18%), Query Frame = 1 Query: 2149 SRSKLATSEPAQSILINDVRKE-MKKPKRA---CKVGFYPVT---KVGPAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESL-ADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMN 2925 SRS L T+ P + R + + PKR F+P K+ P K KT+ S +P VE + A + G Y S ++ IP +HPS LL+ENGF + Y++F + L A+R++ GIG+SQE+NTLFRFWSFFLR++ +++MYEEF+K A ED+ GYRYG+ECLFR ++Y LE K F + ++DF ++D D +LYGLEKFWAFLKY K EV +I+K L+KYKT+EDFR + Sbjct: 2 SRS-LPTTMPEPPAFLQHTRTQGSRTPKRKDAKTAPRFFPAISKEKLYPESGPHKRKTKYSHNPPVEAHLASAAAVGSYGSTPQS---------------------IPHFEHPSHRLLKENGFTQQLYHKFHLKCLKAERKKLGIGQSQEVNTLFRFWSFFLRQHFNRKMYEEFKKLAVEDSAAGYRYGLECLFRYYSYGLE--KKFRPELFKDFMDETIRDHDQGNLYGLEKFWAFLKYYKAKFEVDPEIQKRLDKYKTIEDFRKD 244
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Nematostella
Match: EDO31875 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SWN3]) HSP 1 Score: 130.568 bits (327), Expect = 1.638e-34 Identity = 81/203 (39.90%), Postives = 116/203 (57.14%), Query Frame = 1 Query: 2161 LATSEPAQSILINDVRKE-MKKPKRA---CKVGFYPVT---KVGPAKDKLKDKTRASLHPVVEYDVGYAYSGG-YYNSRRRTVSGSTYSQYNDAGYAVAHG-IP--IPFNDHPSQLLLQENGFEIKFYNEFRKESL-ADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQ 2733 L T+ P + R + + PKR F+P K+ P K KT+ S +P VE VG+ + R + S A ++G P IP +HPS LL+ENGF + Y++F + L A+R++ GIG+SQE+NTLFRFWSFFLR++ +++MYEEF+K A ED+ GYRYG+ECLFR ++Y LE+ Sbjct: 2 LPTTMPEPPAFLQHTRTQGSRTPKRKDAKTAPRFFPAISKEKLYPESGPHKRKTKYSHNPPVEAHVGWVMGATDFIPPARYNTTKSMQIPLASAAAVGSYGSTPQSIPHFEHPSHRLLKENGFTQQLYHKFHLKCLKAERKKLGIGQSQEVNTLFRFWSFFLRQHFNRKMYEEFKKLAVEDSAAGYRYGLECLFRYYSYGLEK 204
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Medaka
Match: larp1 (La ribonucleoprotein 1, translational regulator [Source:NCBI gene;Acc:101161076]) HSP 1 Score: 198.364 bits (503), Expect = 3.296e-52 Identity = 109/230 (47.39%), Postives = 150/230 (65.22%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPV K AK K KTR S +P +E VG+ + SR +VS S + G +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +++MYEEF++ A ED +GYRYG+ECLFR F+Y LE K F +++FQ+ ++D ++ LYGLEKFWAFLKYS K LE+ K+++ L+K+K LEDFR++ Sbjct: 523 FYPVVKESRPVDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRSRTASVSPSEGTPV--MGNIGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLALEDGKEGYRYGLECLFRYFSYGLE--KKFRPDIFKNFQEETIRDYEAGQLYGLEKFWAFLKYSKTKTLEIEPKLQEHLKKFKRLEDFRID 748
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Medaka
Match: larp1 (La ribonucleoprotein 1, translational regulator [Source:NCBI gene;Acc:101161076]) HSP 1 Score: 199.519 bits (506), Expect = 8.167e-52 Identity = 108/232 (46.55%), Postives = 149/232 (64.22%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIP--IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPV K AK K KTR S +P +E VG+ + SR +VS + P +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +++MYEEF++ A ED +GYRYG+ECLFR F+Y LE K F +++FQ+ ++D ++ LYGLEKFWAFLKYS K LE+ K+++ L+K+K LEDFR++ Sbjct: 767 FYPVVKESRPVDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRSRTASVSSNASPSEGTPVMGNIGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLALEDGKEGYRYGLECLFRYFSYGLE--KKFRPDIFKNFQEETIRDYEAGQLYGLEKFWAFLKYSKTKTLEIEPKLQEHLKKFKRLEDFRID 996
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Medaka
Match: larp1 (La ribonucleoprotein 1, translational regulator [Source:NCBI gene;Acc:101161076]) HSP 1 Score: 199.519 bits (506), Expect = 8.302e-52 Identity = 108/232 (46.55%), Postives = 149/232 (64.22%), Query Frame = 1 Query: 2248 FYPVTKVG---PAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIP--IPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYS-GKKLEVHSKIKKLLEKYKTLEDFRMN 2925 FYPV K AK K KTR S +P +E VG+ + SR +VS + P +P HPS LL+ENGF Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR++ +++MYEEF++ A ED +GYRYG+ECLFR F+Y LE K F +++FQ+ ++D ++ LYGLEKFWAFLKYS K LE+ K+++ L+K+K LEDFR++ Sbjct: 791 FYPVVKESRPVDAKTPRKRKTRHSSNPPMECHVGWVMDSREHRSRTASVSSNASPSEGTPVMGNIGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLALEDGKEGYRYGLECLFRYFSYGLE--KKFRPDIFKNFQEETIRDYEAGQLYGLEKFWAFLKYSKTKTLEIEPKLQEHLKKFKRLEDFRID 1020
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Medaka
Match: larp1b (la-related protein 1B [Source:NCBI gene;Acc:101164766]) HSP 1 Score: 187.963 bits (476), Expect = 3.655e-48 Identity = 106/232 (45.69%), Postives = 151/232 (65.09%), Query Frame = 1 Query: 2248 FYPVTKVGPAKDK---LKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGI---PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSG-KKLEVHSKIKKLLEKYKTLEDFRM 2922 FYPV K + DK K KTR S +P E +G+ + R ++S S S + A + ++G +P HPS +L++NGF + Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR+N +++MYEEF+++A EDA + YRYG+ECLFR ++Y LE K F ++DFQ+ LKD + LYGLEKFWAFLKYS K + K+++ L K++ LEDFR+ Sbjct: 756 FYPVMKESSSLDKQTPRKKKTRHSANPPHEAHIGWVMDSREHRPRSASISSSNASPSDGAPLSGSYGCTPQSLPKFWHPSHEMLRDNGFTQQGYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDNFNRKMYEEFRQFAVEDAKENYRYGLECLFRYYSYGLE--KRFRLDLFKDFQEETLKDFEKGQLYGLEKFWAFLKYSKMKNQPIDPKLQEHLCKFRNLEDFRV 985
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Medaka
Match: larp1b (la-related protein 1B [Source:NCBI gene;Acc:101164766]) HSP 1 Score: 187.578 bits (475), Expect = 3.912e-48 Identity = 106/232 (45.69%), Postives = 151/232 (65.09%), Query Frame = 1 Query: 2248 FYPVTKVGPAKDK---LKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGI---PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSG-KKLEVHSKIKKLLEKYKTLEDFRM 2922 FYPV K + DK K KTR S +P E +G+ + R ++S S S + A + ++G +P HPS +L++NGF + Y+++R+ L +R+R GIG+SQEMNTLFRFWSFFLR+N +++MYEEF+++A EDA + YRYG+ECLFR ++Y LE K F ++DFQ+ LKD + LYGLEKFWAFLKYS K + K+++ L K++ LEDFR+ Sbjct: 700 FYPVMKESSSLDKQTPRKKKTRHSANPPHEAHIGWVMDSREHRPRSASISSSNASPSDGAPLSGSYGCTPQSLPKFWHPSHEMLRDNGFTQQGYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDNFNRKMYEEFRQFAVEDAKENYRYGLECLFRYYSYGLE--KRFRLDLFKDFQEETLKDFEKGQLYGLEKFWAFLKYSKMKNQPIDPKLQEHLCKFRNLEDFRV 929
BLAST of La ribonucleoprotein domain family member 1B vs. Planmine SMEST
Match: SMESG000004135.1 (SMESG000004135.1) HSP 1 Score: 1806.19 bits (4677), Expect = 0.000e+0 Identity = 931/937 (99.36%), Postives = 935/937 (99.79%), Query Frame = 1 Query: 115 MNIEKDWPTLVEANHVXXXXXXXXXXXRSTWVKVNAGINFNKSESAIELARDTKLNDKEKHVQTNNSNNVVTKEIKRLYIDKNSYIKPFDIDNEDLYNYCEDTAVNNVRQKTLCKHLPSKNNISNDLTDVRVNEMYCEFLNNYLSYINSEQLNPIYPESLDNYNDKVQEPDKLKSETKPVYNQIHENEIMYVRANVLSYYFSEMNLFNDKYLMSIMDDDGWVNLDILLKFPRLLKTKTTMQDVSNIVSNIKYPEFSYNGTKSLPETVLQLKEDENGWKIRRSDMTKFKINLLAFSDPTSYSPIQHELPFPRYTYNYFLSNLNNIFMFSSKTNKTEDSKVCDWTEVKPKVRRSRKSESCLXXXXXXXXXXXXXXLDFEFTSEPNPYQQHKNNQSIRRKHVSRKSMDRSRSRTISGGSEDELDESNIYILSMKPKMTYAKILDWAXXXXXXXXXXXXNNKEISVSTNTQSKYNLSQRLLSKHPSGDRHPNPDYQPRSKIQEQLREIISDGLKDWKNNTEVIXXXXXXXXXXXXXDIKVQICQDEKTFKLMQKSLQNYDNSEGTDDPNLPTSIIPIETKVEVMKQKSVNVMIFKPLPKEMNIDCDFLVESSTSSVVNPVQYNSWSPPFTITDSVNQWLDKLLENVQYQYLNVGNSEKLNKAASNLYQLQQMNTNGNKTAEESRSKLATSEPAQSILINDVRKEMKKPKRACKVGFYPVTKVGPAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMN 2925 MNIEKDWPTLVEANHVKDVKKKYNIKKRSTWVKVNAGINFNKSESAIELARDTKLNDKEKHVQTNNSNNVVTKEIKRLYIDKNSYIKPFDIDNEDLYNYCEDTAVNNVRQKTLCKHLPSKNNISNDLTDVRVNEMYCEFLNNYLSYINSEQLNPIYPESLDNYNDKVQEPDKLKSETK VYNQIHENEIMYVRANVLSYYFSEMNLFNDKYLMSIMDDDGWVNLDILLKFPRLLKTKTTMQDVSNIVSNIKYPEFSYNGTKSLPETVLQLKEDENGWKIRRSDMTKFKINLLAFSDPTSYSPIQHELPFP+YTYNYFLSNLNNIFMFSSKTNKTEDSKVCDWTEVKPKVRRSRKSESCLNENQNNVNVDKQDNLDFEFTSEPNPYQQHK+NQSIRRKHVSRKSMDRSRSRTISGGSEDELDESNIYILSMKPKMTYAKILDWADVSDSDDDDEEDNNKEISVSTNTQSKYNLSQRLLSKHPSGDRHPNPDYQPRSKIQEQLREIISDGLKDWKNNTEVIRRNRRDSSSSTSSDIKVQICQDEKTFKLMQKSLQNYDNSEGTDDPNLPTSIIPIETKVEVMKQKSVN+MIFKPLPKEMNIDCDFLVESSTSSVVNPVQYNSWSPPFTITDSVNQWLDKLLENVQYQYLNVGNSEKLNKAASNLYQLQQ+NTNGNKTAEESRSKLA SEPAQSILINDVRKEMKKPKRACKVGFYPVTKVGPAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMN Sbjct: 1 MNIEKDWPTLVEANHVKDVKKKYNIKKRSTWVKVNAGINFNKSESAIELARDTKLNDKEKHVQTNNSNNVVTKEIKRLYIDKNSYIKPFDIDNEDLYNYCEDTAVNNVRQKTLCKHLPSKNNISNDLTDVRVNEMYCEFLNNYLSYINSEQLNPIYPESLDNYNDKVQEPDKLKSETKHVYNQIHENEIMYVRANVLSYYFSEMNLFNDKYLMSIMDDDGWVNLDILLKFPRLLKTKTTMQDVSNIVSNIKYPEFSYNGTKSLPETVLQLKEDENGWKIRRSDMTKFKINLLAFSDPTSYSPIQHELPFPKYTYNYFLSNLNNIFMFSSKTNKTEDSKVCDWTEVKPKVRRSRKSESCLNENQNNVNVDKQDNLDFEFTSEPNPYQQHKSNQSIRRKHVSRKSMDRSRSRTISGGSEDELDESNIYILSMKPKMTYAKILDWADVSDSDDDDEEDNNKEISVSTNTQSKYNLSQRLLSKHPSGDRHPNPDYQPRSKIQEQLREIISDGLKDWKNNTEVIRRNRRDSSSSTSSDIKVQICQDEKTFKLMQKSLQNYDNSEGTDDPNLPTSIIPIETKVEVMKQKSVNIMIFKPLPKEMNIDCDFLVESSTSSVVNPVQYNSWSPPFTITDSVNQWLDKLLENVQYQYLNVGNSEKLNKAASNLYQLQQLNTNGNKTAEESRSKLAASEPAQSILINDVRKEMKKPKRACKVGFYPVTKVGPAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMN 937
BLAST of La ribonucleoprotein domain family member 1B vs. Planmine SMEST
Match: SMESG000009930.1 (SMESG000009930.1) HSP 1 Score: 228.024 bits (580), Expect = 6.412e-63 Identity = 150/395 (37.97%), Postives = 213/395 (53.92%), Query Frame = 1 Query: 1783 NSEGTDDPNLPTSIIPIETKVEVMK---QKSVNVMIFKPLPKEMNIDCDFLVESST--SSVVNPVQYNSWSPPFTITDSVNQWLDKLLENVQYQYLNVGNSEKLNKAASNLYQLQQMNTNGNKTAEESRSKLATSEPAQSILINDVRKEMKKPKRAC-KVGFYPVTKVGPAKDKLKDKTRASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFF 2949 +S+ D LP S I IE K+ M SV + KPL + NID FL ES T +V N +S + ++ + +DKLL+NV ++Y N T P++ + I K K K++ + FY + D+ R + P++ Y + N R+R S ++YSQY D+G VA G+ P +H ++LL ++ F++ Y EF++ +L+DR+ G GRS EMN LFRFWSFFLREN K+MY+EFQ+ AWEDA GYRYGVEC+FRMF+YKLE + F+ +Y+DFQ NVL+DL N LYGLEKFWA +Y +E +I++ L++YKTLEDFR N + F+ Sbjct: 355 DSQNESDSCLPDSEISIEEKMAWMNINNNPSVLIHKMKPLSQN-NIDYSFLNESCTWYCNVPNDALQFDYSKQY---NNKLENVDKLLDNVIFEYQN------------------------------------TITPSKPVKILPKSKPTTKVKKSINHLNFY---------ESDNDEIRPTNDPMMGYILNK-------NRRKRASSSNSYSQYRDSGKTVAKGLENPHKNHVGEILLNDD-FKLNLYLEFKETALSDRKLTGCGRSAEMNALFRFWSFFLRENSQKKMYKEFQELAWEDAEHGYRYGVECVFRMFSYKLENKERFNMNEYKDFQNNVLRDLKMNSLYGLEKFWALKQYGNLTIEALDEIEEKLKEYKTLEDFRKNYIPPQGFY 692 HSP 2 Score: 95.9005 bits (237), Expect = 7.277e-20 Identity = 53/133 (39.85%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 679 IMYVRANVLSYYFSEMNLFNDKYLMSIMDDDGWVNLDILLKFPRLLKTKTTMQDVSNIVSNIKYPEFSYNGTKSLPETVLQLKEDENGWKIRRSDMTKFKINLLAFSDPTSYSPIQHELPFPRYTYNYFLSNL 1077 IM VR N+L +YFSE NL D +++ M+ +GW+ + ILL FPR+ +T+ T D+ NI N+ P F+ NG S + LQ D+ IRR DM ++ LLAF T +Q E+P+P +T+++F + L Sbjct: 105 IMCVRINLLYFYFSETNLRKDFFMLKNMNQNGWIPIQILLDFPRMKRTRATADDILNISLNLVLPPFTVNGEFS-GSSFLQF--DKANDMIRRCDMDNIELTLLAFR-VTKTITLQLEMPYPNHTFSFFETEL 233
BLAST of La ribonucleoprotein domain family member 1B vs. Planmine SMEST
Match: SMESG000015732.1 (SMESG000015732.1) HSP 1 Score: 205.297 bits (521), Expect = 4.408e-54 Identity = 155/486 (31.89%), Postives = 249/486 (51.23%), Query Frame = 1 Query: 1528 LSQRLLSKHPSGDRHPNPDYQPRSKIQEQLREIISDGL----KDWKNNTEVIXXXXXXXXXXXXXDIKVQICQDEKTFKLMQKSLQNYDNSEGTDDPNLPTSIIPIETKVEVMKQKSVNVMIFKPLPKEMNIDCDFLVESSTSSVVNPVQYNSWSPPFTITDSVNQWLDKLLENVQYQYLNVGNSEKLNKAASNLYQLQQMNTNGNKTAEESRSKLATSEPAQSILINDVRKEMKKPKRACKV-GFYPVT--KVGPAKDKLKDKTR---ASLHPVVEYDVGYAYSGGYYNSRRRTVSGSTYSQYNDAGYAVAHGIPIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDS-NHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFFL 2952 +S+ +L KHP GDR P Y RSK+ +L ++I GL KD++N V + +R +SS++ S + + Q+ F+ + ++L +++ D +P P+ ++V + +P + I ++ S P Y + P + DS G S+K + NKT +E+ + P +SILI + ++K A ++ GF+P + G AK + + R + +E VG+A+ +R RT S S+ S+ + + +H S +L+ NGF YN+F+ +L DRE G+G SQEMNTL+RFWSFFLREN +K M+ EF+ A +DA + RYG+ECLFR ++Y LE F + +++F+++ L+D D+ H YGLEKFWAFL YS KK++++S++ +LL+KYKTLED R N + FF+ Sbjct: 491 ISKSVLDKHPGGDRKPF--YVSRSKMNSELEDVIKLGLEAYEKDFRNKNVVNKNSRSRTSSNSESKVNLVSRQE---FEALSQTLADFNVHSNKSDNEVPP---PLPNHSPAPASETVFSSFSQMVPTLIGIPA------TSDSFYPPGTYMYFPPVVAVCDS-------------------GTSQKQD----------------NKTKQETEESI----PLKSILIKKLDSDLKSKSSARQIAGFFPAGSDRYGGAKHNKQKRQRLYSEGENLQLETHVGFAFDTKNNVARSRTASASSDSEIVKDSSSSTFAM----KNHKSHAILKANGFTFNGYNKFKAYALRDREINGVGFSQEMNTLYRFWSFFLRENFNKSMFREFRSLALDDANQNARYGLECLFRFYSYGLEI--RFRKSLFKNFEEDTLRDYDTYKHKYGLEKFWAFLFYSKKKIDINSRLSELLDKYKTLEDIRANFIPPDGFFI 917 HSP 2 Score: 50.447 bits (119), Expect = 8.704e-6 Identity = 24/55 (43.64%), Postives = 32/55 (58.18%), Query Frame = 1 Query: 703 LSYYFSEMNLFNDKYLMSIMDDDGWVNLDILLKFPRLLKTKTTMQDVSNIVSNIK 867 + YYFSE NL D YL S MD DGWV+L I+ F R+ + ++ I+S K Sbjct: 297 VEYYFSEENLHKDTYLRSRMDSDGWVSLLIIAGFKRIANFGVDVGTIAQILSTSK 351
BLAST of La ribonucleoprotein domain family member 1B vs. Planmine SMEST
Match: SMESG000033210.1 (SMESG000033210.1) HSP 1 Score: 205.297 bits (521), Expect = 6.785e-54 Identity = 92/170 (54.12%), Postives = 127/170 (74.71%), Query Frame = 1 Query: 2443 PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFFL 2952 P F +HPS++LLQ NGF YN+F+ + DRE G G SQEMNTL+RFWSFFLREN +K MY++F+K A EDA +G RYG+ECLFR F+Y LE K F ++ ++DFQ++ LKD+++ H YGLEKFWAFL YS +++E+ ++ K LE YKT++DFR N ++ + FF+ Sbjct: 850 PNSFANHPSRMLLQSNGFTFHAYNKFKSNCIKDREESGKGLSQEMNTLYRFWSFFLRENFNKNMYKDFRKVAIEDAAEGARYGIECLFRFFSYGLE--KKFRKELFKDFQEDTLKDVNNGHKYGLEKFWAFLHYSKRQIEIDKELAKHLENYKTVDDFRANFEKPDGFFV 1017
BLAST of La ribonucleoprotein domain family member 1B vs. Planmine SMEST
Match: SMESG000033210.1 (SMESG000033210.1) HSP 1 Score: 205.297 bits (521), Expect = 7.043e-54 Identity = 92/170 (54.12%), Postives = 127/170 (74.71%), Query Frame = 1 Query: 2443 PIPFNDHPSQLLLQENGFEIKFYNEFRKESLADRERKGIGRSQEMNTLFRFWSFFLRENKSKRMYEEFQKYAWEDAMKGYRYGVECLFRMFTYKLEQTKHFSEQQYQDFQKNVLKDLDSNHLYGLEKFWAFLKYSGKKLEVHSKIKKLLEKYKTLEDFRMNVKQREKFFL 2952 P F +HPS++LLQ NGF YN+F+ + DRE G G SQEMNTL+RFWSFFLREN +K MY++F+K A EDA +G RYG+ECLFR F+Y LE K F ++ ++DFQ++ LKD+++ H YGLEKFWAFL YS +++E+ ++ K LE YKT++DFR N ++ + FF+ Sbjct: 836 PNSFANHPSRMLLQSNGFTFHAYNKFKSNCIKDREESGKGLSQEMNTLYRFWSFFLRENFNKNMYKDFRKVAIEDAAEGARYGIECLFRFFSYGLE--KKFRKELFKDFQEDTLKDVNNGHKYGLEKFWAFLHYSKRQIEIDKELAKHLENYKTVDDFRANFEKPDGFFV 1003 The following BLAST results are available for this feature:
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 3
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 4
BLAST of La ribonucleoprotein domain family member 1B vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of La ribonucleoprotein domain family member 1B vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 2
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of La ribonucleoprotein domain family member 1B vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of La ribonucleoprotein domain family member 1B vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30031888 ID=SMED30031888|Name=La ribonucleoprotein domain family member 1B|organism=Schmidtea mediterranea sexual|type=transcript|length=3221bpback to top protein sequence of SMED30031888-orf-1 >SMED30031888-orf-1 ID=SMED30031888-orf-1|Name=SMED30031888-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=997bp MNIEKDWPTLVEANHVKDVKKKYNIKKRSTWVKVNAGINFNKSESAIELAback to top Annotated Terms
The following terms have been associated with this transcript:
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