SMED30031708

Overview
NameSMED30031708
Smed IDSMED30031708
Length (bp)1194
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30031708 (SMED30031708) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30031708 (SMED30031708) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30031708 (SMED30031708) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30031708 (SMED30031708) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30031708

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 1

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
epidermisSMED30031708 dd_Smed_v4_24366_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of SMED30031708 vs. Planmine SMEST
Match: SMESG000065442.1 (SMESG000065442.1)

HSP 1 Score: 174.481 bits (441), Expect = 8.083e-51
Identity = 115/150 (76.67%), Postives = 130/150 (86.67%), Query Frame = 1 
Query:    1 DNQQQRINMMLDNGGVRXXXXXXXXXXXXXXXXXLQREEAREFQERWKSRDQNTRHINMMMVLNDEEIHTAEQ-CFLNSAGDKIDEHELNEKEDVIPTKRFKTIELSSEEKIKRIQEFIKEKKSEKVTNKRNTKKVEEIQNEETQKIPKP 447
            DNQQQRINM+ DNG VRQ NTNNNQEQQKT WQ LQREEARE QERWK+R QNTRHI+MM V+NDEEI+TAEQ C +N+AGDKIDE ELNEKED+IPTK  KTIELSSEE+IKRIQEFIKEKK ++   +   KK+EEIQNEET+K+PKP
Sbjct:  201 DNQQQRINMIQDNGDVRQKNTNNNQEQQKTEWQRLQREEAREIQERWKTRGQNTRHISMMRVVNDEEINTAEQQCVVNNAGDKIDEQELNEKEDLIPTKIIKTIELSSEERIKRIQEFIKEKKEKRKEIREIQKKIEEIQNEETEKLPKP 350
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BLAST of SMED30031708 vs. Planmine SMEST
Match: SMESG000059107.1 (SMESG000059107.1)

HSP 1 Score: 165.622 bits (418), Expect = 1.805e-44
Identity = 109/198 (55.05%), Postives = 138/198 (69.70%), Query Frame = 1 
Query:    1 DNQQQRINMMLDNGGVRXXXXXXXXXXXXXXXXXLQREEAREFQERWKSRDQNTRHINMMMVLNDEEIHTAEQCFLNSAGDKIDEHELNEKEDVIPTKRFK--TIELSSEEKIKRIQEFIKEKKSEKVTNKRNTKKVEEIQNEETQKIPKPKINEPPAKSRIQRILLQKIEDKI-REDENLTDEQIKEKINDRWFIVK 585
             NQQQRINM+ +N  VR+   N NQ QQ+  WQ LQ EEA+E Q RW+ R+  T+ INMM  +N++EIHTAEQC +NS GD     E++  EDV+P  + K  T +L+SEEKIKRIQEFIKEKK ++   K    K+EEIQN+ET+ I KP       K+RIQRILLQK+E+KI REDE LTDEQ+K+K+  RW   K
Sbjct: 1922 SNQQQRINMLQENEDVREQTINVNQGQQRAEWQRLQMEEAKEIQARWERRNGTTKRINMMEAVNEDEIHTAEQCVVNSDGD-----EMSVNEDVLPENKIKCETSKLTSEEKIKRIQEFIKEKKEKRREIKEIQMKIEEIQNDETKTITKPSKEAMATKNRIQRILLQKLEEKIRREDETLTDEQVKQKLETRWATTK 2114

HSP 2 Score: 80.8777 bits (198), Expect = 4.602e-16
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 3 
Query:  951 WAQRQPIKTIEAETDINNAQQLLNTEASTTDEWSNWIVDKGATTSRVPIIKLSSRKEVGTTTESRSRGRQK 1163
            WAQ++P++T EAETD+ N +Q ++ +  TTDEWSNWI D+GATTSR    +  +RKE GT  +S  RGR K
Sbjct: 2860 WAQKEPVETTEAETDMENVRQAISKDMPTTDEWSNWIADRGATTSRELANRQPNRKEAGTMMDSNFRGRPK 2930

HSP 3 Score: 70.8626 bits (172), Expect = 8.137e-13
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  747 RQMEYAEEIPEKYKLQIQYPDFENEEKEVHIATEIKDMKTSMPYEISFHLQYEGRSLDDEIEIGDEP 947
            R +E A+ I + Y         E EE+E H+ T+IK++K  MPYE+ FHLQYEGRSLDDE+EIG  P
Sbjct: 2703 RAVELAKGIIDSY--------IETEEREEHVTTKIKEIKAKMPYELPFHLQYEGRSLDDELEIGVTP 2761
[Close]
BLAST of SMED30031708 vs. Planmine SMEST
Match: SMESG000007496.1 (SMESG000007496.1)

HSP 1 Score: 145.591 bits (366), Expect = 1.389e-37
Identity = 66/97 (68.04%), Postives = 83/97 (85.57%), Query Frame = 3 
Query:  657 SLRTLVKEIEEYRRVYTSYPEQLEGMIRKWRQMEYAEEIPEKYKLQIQYPDFENEEKEVHIATEIKDMKTSMPYEISFHLQYEGRSLDDEIEIGDEP 947
            +LRTLVKEIEEYRR+Y+ YPEQ +G+IRKW+ ME+AEE PEKY+L+IQYPD E EE E ++ T+IK++K +MPYE+ FHLQYE RSLDDE+EIG  P
Sbjct: 1578 NLRTLVKEIEEYRRIYSWYPEQFDGLIRKWKHMEWAEERPEKYRLKIQYPDIETEEGEEYVTTKIKEIKANMPYELHFHLQYERRSLDDELEIGVTP 1674

HSP 2 Score: 122.865 bits (307), Expect = 5.789e-30
Identity = 90/195 (46.15%), Postives = 116/195 (59.49%), Query Frame = 1 
Query:    4 NQQQRINMMLDNGGVRXXXXXXXXXXXXXXXXXLQREEAREFQERWKSRDQNTRHINMMMVLNDEEIHTAEQCFLNSAGDKIDEHELNEKEDVIPTKRFKTIELSSEEKIKRIQEFIKEKKSEKVTNKRNTKKVEEIQNEETQKIPKPKINEPPAKSRIQRILLQKIEDKI-REDENLTDEQIKEKINDRWFIVK 585
            NQQQRINM+ +NG VR+   N NQEQQ+  WQ LQ EEA+E Q RW+ R+  T+ INMM  +N+ E+HTA+QC +NS GD+   +E  +K                  +IK IQ                  K+EEIQN+ET+ I KP       K+RIQRILLQK+E+KI REDE LTDEQ+K+K+  RW   K
Sbjct:  869 NQQQRINMLQENGDVREQIINVNQEQQRAEWQRLQMEEAKEIQARWERRNGTTKRINMMRAVNENEMHTADQCVVNSDGDETSVNEDRKKR---------------RREIKEIQ-----------------MKIEEIQNDETKTITKPSKKAMATKNRIQRILLQKLEEKIRREDETLTDEQVKQKLEKRWATAK 1031

HSP 3 Score: 88.9669 bits (219), Expect = 1.090e-18
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 3 
Query:  951 WAQRQPIKTIEAETDINNAQQLLNTEASTTDEWSNWIVDKGATTSRVPIIKLSSRKEVGTTTESRSRGRQK 1163
            WAQR+P++T EAETD+ N +Q ++ +  TTDEWSNWI D+GATTSR    +   RKE GT  +S+SRGRQK
Sbjct: 1745 WAQRKPVETTEAETDMENVRQAISKDMPTTDEWSNWIADRGATTSRELANRQPDRKEAGTMMDSKSRGRQK 1815
[Close]
BLAST of SMED30031708 vs. Planmine SMEST
Match: SMESG000007496.1 (SMESG000007496.1)

HSP 1 Score: 145.591 bits (366), Expect = 1.425e-37
Identity = 66/97 (68.04%), Postives = 83/97 (85.57%), Query Frame = 3 
Query:  657 SLRTLVKEIEEYRRVYTSYPEQLEGMIRKWRQMEYAEEIPEKYKLQIQYPDFENEEKEVHIATEIKDMKTSMPYEISFHLQYEGRSLDDEIEIGDEP 947
            +LRTLVKEIEEYRR+Y+ YPEQ +G+IRKW+ ME+AEE PEKY+L+IQYPD E EE E ++ T+IK++K +MPYE+ FHLQYE RSLDDE+EIG  P
Sbjct: 1604 NLRTLVKEIEEYRRIYSWYPEQFDGLIRKWKHMEWAEERPEKYRLKIQYPDIETEEGEEYVTTKIKEIKANMPYELHFHLQYERRSLDDELEIGVTP 1700

HSP 2 Score: 121.709 bits (304), Expect = 1.609e-29
Identity = 88/195 (45.13%), Postives = 116/195 (59.49%), Query Frame = 1 
Query:    4 NQQQRINMMLDNGGVRXXXXXXXXXXXXXXXXXLQREEAREFQERWKSRDQNTRHINMMMVLNDEEIHTAEQCFLNSAGDKIDEHELNEKEDVIPTKRFKTIELSSEEKIKRIQEFIKEKKSEKVTNKRNTKKVEEIQNEETQKIPKPKINEPPAKSRIQRILLQKIEDKI-REDENLTDEQIKEKINDRWFIVK 585
            NQQQRINM+ +NG VR+   N NQEQQ+  WQ LQ EEA+E Q RW+ R+  T+ INMM  +N+ E+HTA+QC +NS GD+   +E N  +     +  K I++                            K+EEIQN+ET+ I KP       K+RIQRILLQK+E+KI REDE LTDEQ+K+K+  RW   K
Sbjct:  869 NQQQRINMLQENGDVREQIINVNQEQQRAEWQRLQMEEAKEIQARWERRNGTTKRINMMRAVNENEMHTADQCVVNSDGDETSVNEDNSSKRKKRRREIKEIQM----------------------------KIEEIQNDETKTITKPSKKAMATKNRIQRILLQKLEEKIRREDETLTDEQVKQKLEKRWATAK 1035

HSP 3 Score: 88.9669 bits (219), Expect = 1.067e-18
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 3 
Query:  951 WAQRQPIKTIEAETDINNAQQLLNTEASTTDEWSNWIVDKGATTSRVPIIKLSSRKEVGTTTESRSRGRQK 1163
            WAQR+P++T EAETD+ N +Q ++ +  TTDEWSNWI D+GATTSR    +   RKE GT  +S+SRGRQK
Sbjct: 1771 WAQRKPVETTEAETDMENVRQAISKDMPTTDEWSNWIADRGATTSRELANRQPDRKEAGTMMDSKSRGRQK 1841
[Close]
BLAST of SMED30031708 vs. Planmine SMEST
Match: SMESG000007496.1 (SMESG000007496.1)

HSP 1 Score: 145.591 bits (366), Expect = 1.501e-37
Identity = 66/97 (68.04%), Postives = 83/97 (85.57%), Query Frame = 3 
Query:  657 SLRTLVKEIEEYRRVYTSYPEQLEGMIRKWRQMEYAEEIPEKYKLQIQYPDFENEEKEVHIATEIKDMKTSMPYEISFHLQYEGRSLDDEIEIGDEP 947
            +LRTLVKEIEEYRR+Y+ YPEQ +G+IRKW+ ME+AEE PEKY+L+IQYPD E EE E ++ T+IK++K +MPYE+ FHLQYE RSLDDE+EIG  P
Sbjct: 1458 NLRTLVKEIEEYRRIYSWYPEQFDGLIRKWKHMEWAEERPEKYRLKIQYPDIETEEGEEYVTTKIKEIKANMPYELHFHLQYERRSLDDELEIGVTP 1554

HSP 2 Score: 120.168 bits (300), Expect = 4.669e-29
Identity = 89/196 (45.41%), Postives = 113/196 (57.65%), Query Frame = 1 
Query:    4 NQQQRINMMLDNGGVRXXXXXXXXXXXXXXXXXLQREEAREFQERWKSRDQNTRHINMMMVLNDEEIHTAEQCFLNSAGDKIDEHELNEKEDVIPTKRFKTIELSSEEKIKRIQEFIKEKKSEKVTNKRNTKKVE-EIQNEETQKIPKPKINEPPAKSRIQRILLQKIEDKI-REDENLTDEQIKEKINDRWFIVK 585
            NQQQRINM+ +NG VR+   N NQEQQ+  WQ LQ EEA+E Q RW+ R+  T+ INMM  +N+ E+HTA+QC +NS GD     E +  EDV+P                                  N  K E +IQN+ET+ I KP       K+RIQRILLQK+E+KI REDE LTDEQ+K+K+  RW   K
Sbjct:  869 NQQQRINMLQENGDVREQIINVNQEQQRAEWQRLQMEEAKEIQARWERRNGTTKRINMMRAVNENEMHTADQCVVNSDGD-----ETSVNEDVLP---------------------------------ENIIKCETKIQNDETKTITKPSKKAMATKNRIQRILLQKLEEKIRREDETLTDEQVKQKLEKRWATAK 1026

HSP 3 Score: 88.9669 bits (219), Expect = 1.063e-18
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 3 
Query:  951 WAQRQPIKTIEAETDINNAQQLLNTEASTTDEWSNWIVDKGATTSRVPIIKLSSRKEVGTTTESRSRGRQK 1163
            WAQR+P++T EAETD+ N +Q ++ +  TTDEWSNWI D+GATTSR    +   RKE GT  +S+SRGRQK
Sbjct: 1625 WAQRKPVETTEAETDMENVRQAISKDMPTTDEWSNWIADRGATTSRELANRQPDRKEAGTMMDSKSRGRQK 1695
The following BLAST results are available for this feature:
BLAST of SMED30031708 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031708 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000065442.18.083e-5176.67SMESG000065442.1[more]
SMESG000059107.11.805e-4455.05SMESG000059107.1[more]
SMESG000007496.11.389e-3768.04SMESG000007496.1[more]
SMESG000007496.11.425e-3768.04SMESG000007496.1[more]
SMESG000007496.11.501e-3768.04SMESG000007496.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30031708 ID=SMED30031708|Name=SMED30031708|organism=Schmidtea mediterranea sexual|type=transcript|length=1194bp
GATAACCAGCAACAACGAATTAATATGATGCTAGACAATGGAGGTGTTAG
ACAACCAAATACAAATAATAATCAAGAACAACAGAAAACCTAATGGCAAA
CATTACAAAGAGAAGAAGCAAGAGAATTTCAAGAAAGATGGAAAAGCAGA
GATCAAAACACAAGACATATAAACATGATGATGGTCTTAAATGATGAAGA
AATCCACACTGCGGAGCAATGTTTTTTGAACAGCGCTGGTGATAAAATAG
ACGAGCATGAGCTAAATGAAAAAGAAGATGTAATACCTACGAAAAGATTT
AAAACTATTGAGCTGAGTAGTGAAGAGAAAATAAAAAGAATTCAAGAATT
TATTAAAGAGAAAAAAAGCGAAAAGGTTACAAATAAGAGAAATACAAAAA
AAGTTGAAGAAATTCAAAATGAAGAGACACAAAAAATACCTAAACCAAAA
ATAAACGAACCACCTGCAAAAAGTCGAATCCAGAGAATACTACTGCAAAA
GATCGAAGATAAAATCCGAGAAGATGAAAATTTAACAGATGAACAAATTA
AAGAAAAAATAAACGATAGATGGTTTATAGTAAAAAACAAGTTGCGATAC
AGCAAATGAAGAAGAACCAATAAGTGCATTAAAAATAAACATGGTGAGAA
TTTAGTAGCCTGAGAACGTTAGTTAAAGAAATTGAGGAATATCGACGAGT
GTATACTTCGTATCCCGAACAACTAGAAGGAATGATTCGAAAATGGAGAC
AAATGGAATATGCCGAAGAAATCCCTGAAAAATATAAATTGCAAATTCAA
TATCCAGATTTTGAAAATGAAGAAAAAGAAGTCCACATTGCGACGGAAAT
TAAAGATATGAAAACCAGCATGCCGTATGAAATATCATTTCACCTACAAT
ATGAAGGGAGATCGTTAGATGACGAAATAGAAATTGGAGATGAACCCAAT
TGGGCACAAAGACAACCAATCAAAACAATAGAAGCGGAAACGGACATAAA
TAATGCACAACAACTGCTCAATACAGAAGCATCCACAACGGATGAATGGA
GCAATTGGATAGTAGATAAAGGAGCTACAACGTCGAGAGTACCGATAATT
AAACTATCCAGTAGAAAAGAAGTGGGAACAACTACAGAGAGCAGATCAAG
AGGAAGACAAAAAAAATAGCATGGAACCGAAACAAAAATCGAAA
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protein sequence of SMED30031708-orf-1

>SMED30031708-orf-1 ID=SMED30031708-orf-1|Name=SMED30031708-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=145bp
MMMVLNDEEIHTAEQCFLNSAGDKIDEHELNEKEDVIPTKRFKTIELSSE
EKIKRIQEFIKEKKSEKVTNKRNTKKVEEIQNEETQKIPKPKINEPPAKS
RIQRILLQKIEDKIREDENLTDEQIKEKINDRWFIVKNKLRYSK*
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protein sequence of SMED30031708-orf-2

>SMED30031708-orf-2 ID=SMED30031708-orf-2|Name=SMED30031708-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=146bp
MIRKWRQMEYAEEIPEKYKLQIQYPDFENEEKEVHIATEIKDMKTSMPYE
ISFHLQYEGRSLDDEIEIGDEPNWAQRQPIKTIEAETDINNAQQLLNTEA
STTDEWSNWIVDKGATTSRVPIIKLSSRKEVGTTTESRSRGRQKK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002032epidermal cell
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..145