Pumilio protein

Overview
NamePumilio protein
Smed IDSMED30031704
Length (bp)3231
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Pumilio protein (SMED30031704) t-SNE clustered cells

Violin plots show distribution of expression levels for Pumilio protein (SMED30031704) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Pumilio protein (SMED30031704) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Pumilio protein (SMED30031704) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30031704

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
parapharyngeal regionSMED30031704SMESG000008631.1 SMESG000008630.1 dd_Smed_v4_1677_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
central nervous systemSMED30031704SMESG000008631.1 DN295269ncbi_smed_estsPMID:16344473
Zayas et al., 2005		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
testisSMED30031704SMESG000008631.1 DN295269ncbi_smed_estsPMID:16344473
Zayas et al., 2005		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
X1 cellSMED30031704SMESG000008631.1 SMESG000008630.1 CUFF.266451.1be_Smed_v2PMID:22543868
Onal et al., 2012		FACS sorted cell population asexual adult RNA-sequencing evidence
epidermisSMED30031704SMESG000008631.1 SMESG000008630.1 dd_Smed_v4_1677_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
male germ cellSMED30031704SMESG000008631.1 SMESG000008630.1 KU852681smed_ncbi_20200123PMID:27330085
Iyer et al., 2016		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Pumilio protein vs. Ensembl Human
Match: PUM2 (pumilio RNA binding family member 2 [Source:HGNC Symbol;Acc:HGNC:14958])

HSP 1 Score: 481.871 bits (1239), Expect = 4.970e-154
Identity = 238/392 (60.71%), Postives = 285/392 (72.70%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  519 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 875
[Close]
BLAST of Pumilio protein vs. Ensembl Human
Match: PUM2 (pumilio RNA binding family member 2 [Source:HGNC Symbol;Acc:HGNC:14958])

HSP 1 Score: 483.026 bits (1242), Expect = 8.415e-154
Identity = 238/392 (60.71%), Postives = 285/392 (72.70%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  572 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 928
[Close]
BLAST of Pumilio protein vs. Ensembl Human
Match: PUM2 (pumilio RNA binding family member 2 [Source:HGNC Symbol;Acc:HGNC:14958])

HSP 1 Score: 483.797 bits (1244), Expect = 2.640e-153
Identity = 238/392 (60.71%), Postives = 285/392 (72.70%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  651 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 1007
[Close]
BLAST of Pumilio protein vs. Ensembl Human
Match: PUM2 (pumilio RNA binding family member 2 [Source:HGNC Symbol;Acc:HGNC:14958])

HSP 1 Score: 483.026 bits (1242), Expect = 2.023e-152
Identity = 238/392 (60.71%), Postives = 285/392 (72.70%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 1063
[Close]
BLAST of Pumilio protein vs. Ensembl Human
Match: PUM2 (pumilio RNA binding family member 2 [Source:HGNC Symbol;Acc:HGNC:14958])

HSP 1 Score: 483.026 bits (1242), Expect = 2.023e-152
Identity = 238/392 (60.71%), Postives = 285/392 (72.70%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 1063
[Close]
BLAST of Pumilio protein vs. Ensembl Celegans
Match: puf-9 (PUF (Pumilio/FBF) domain-containing [Source:UniProtKB/TrEMBL;Acc:Q23191])

HSP 1 Score: 363.999 bits (933), Expect = 6.007e-112
Identity = 193/392 (49.23%), Postives = 247/392 (63.01%), Query Frame = 1 
Query: 1690 GVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAF----KDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIV-TLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMK 2850
            G+  N      R R  ED   N  T  TLQ+I  +V+EFA+DQHGSRFIQQKL+ +S  +K  +F  +L +   LMTDVFGNYVIQ+FF+ G  EQ   L   IR  V++L+LQMYGCRVIQKALE V +  Q  I+ E+EG V+KCVKDQNGNHV+QK +E V PE L FIIDAF     DNVY+LS H YGCRVIQR+LE+C  EQ  P+L  L    ++LV DQYGNYVIQHV+EHG   DK +IV  ++   +++ + HKFASNV+EK +      ER  +I++V  D  P   S  +++                                MMKD FANYV+QKMLDVA+   RK++   IKPH+ +LRKY +GKHI+ K+EKY+ K
Sbjct:  314 GLPPNFSQNPPRRRGPED--PNGQTPKTLQDIKNNVIEFAKDQHGSRFIQQKLERASLRDKAAIFTPVLENAEELMTDVFGNYVIQKFFEFGNNEQRNQLVGTIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEGQVLKCVKDQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNEEQKQPVLDALQIHLKQLVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISDDLLKFAQHKFASNVIEKCLTFGGHAERNLIIDKVCGD--PNDPSPPLLQ--------------------------------MMKDPFANYVVQKMLDVADPQHRKKITLTIKPHIATLRKYNFGKHILLKLEKYFAK 669
[Close]
BLAST of Pumilio protein vs. Ensembl Celegans
Match: puf-8 (PUF (Pumilio/FBF) domain-containing [Source:UniProtKB/TrEMBL;Acc:Q09487])

HSP 1 Score: 304.679 bits (779), Expect = 6.556e-92
Identity = 153/404 (37.87%), Postives = 236/404 (58.42%), Query Frame = 1 
Query: 1669 PMQPGYKGVVGN-LKDGVTRSRLLEDFRAN--RLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHN-EKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAF---KDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVL---QDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMK 2850
            P+QP   G+  N  ++  T   LL  +RAN   +  L L +I G +++FA+DQ GSRFIQQ+L  S    EK  +F E++ +   L+ D+FGNYV+Q+FF+ G       L D I ++V + + QMY CRV+QKALE +++  QI I+ ++   + +C+KDQNGNHVVQK +E V P+++ FI+D      + +Y +S   YGCRV+QR LEHC+P QT P++ ++H   +E+  +QYGNYV+QHV+EHG  ED+  IVT +   + E + HK++SNV+EK +       +  ++       + ++P                                     ++  MMKDQ+ANYV+QKM D      R+EL+  ++PH+  LR++ +GKHI+ K+EKY+ K
Sbjct:  154 PVQPSATGIFSNPYREPTTTDDLLTRYRANPAMMKNLKLSDIRGALLKFAKDQVGSRFIQQELASSKDRFEKDSIFDEVVSNADELVDDIFGNYVVQKFFEYGEERHWARLVDAIIDRVPEYAFQMYACRVLQKALEKINEPLQIKILSQIRHVIHRCMKDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPYGCRVVQRCLEHCSPSQTKPVIGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLFEFATHKYSSNVIEKCLEQGAVYHKSMIVGAACHHQEGSVP-------------------------------------IVVQMMKDQYANYVVQKMFDQVTSEQRRELILTVRPHIPVLRQFPHGKHILAKLEKYFQK 520
[Close]
BLAST of Pumilio protein vs. Ensembl Celegans
Match: puf-11 (PUF (Pumilio/FBF) domain-containing [Source:UniProtKB/TrEMBL;Acc:Q8IU00])

HSP 1 Score: 132.88 bits (333), Expect = 2.710e-32
Identity = 122/472 (25.85%), Postives = 208/472 (44.07%), Query Frame = 1 
Query: 1558 QFSVMPGSNPTMLGAPQPSHALM----------PAT-GSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNE-KTMVFREILPH---CYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGS-VIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAF--KDNVYSLSTHSYGCRVIQRILEHCTPEQTA-----------PILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTL---LRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKML----------DVAEQPMRKELMTKIKPHL----GSLRKYTYGKHIINKME 2835
            QFS    S P    A  P  AL           P T  S   +++ + P+  G     GN+ D VT    L D  AN             +VEFA D++G RF+Q+     S N+    +FR+++       +L  ++FGN+ +QR  +    E+ +IL + + + +  L L    CRVIQ A++ +       +  EL  + +++   DQNGNHV+QK V+ +P     F+++ F   DN+  +    YGCRVIQ  +E  + +  A            +++ +     +L  +++ NYV+QHV++ G      + V +   L   ++ +S  K+AS+VVE A   A  +    ++NE+ +  IP   +N   R+A                           L  ++  Q+ NYV+QKM+          D  +  M    + KI+  +      L +++ GK II  ++
Sbjct:   76 QFSKWRTSTPMTTPARHPQQALRLIDLENNASSPNTLNSSTRSYKCTLPIWAGDGE--GNVSDSVT----LPDVLAN-----------DALVEFATDKNGCRFLQEHYPTESDNDIHQKLFRKLVEDRAIFLSLCCNMFGNFFVQRVLECSNTEEQEILTEHLASDLYNLCLDKSACRVIQLAIQKLDVHLATRLSLELRDTYLVRLSIDQNGNHVIQKIVKTLPVSAWSFVVEFFADDDNLIHVCQDKYGCRVIQSTVETLSSDTYAECYQQRVVLLRSLMSGVTRNCSQLASNEFANYVVQHVIKCGDAMAVYRDVIIEQCLLQNLLSMSQEKYASHVVEVAFGCAPCRLAAEMMNEIFEGYIPHPDTN---RDA---------------------------LDILLFHQYGNYVVQKMIQICVLGQNARDQKQAEMYGMWLEKIRERVMRNANRLERFSSGKKIIEALQ 500
[Close]
BLAST of Pumilio protein vs. Ensembl Celegans
Match: puf-3 (PUF (Pumilio/FBF) domain-containing [Source:UniProtKB/TrEMBL;Acc:Q9U2G4])

HSP 1 Score: 132.109 bits (331), Expect = 5.379e-32
Identity = 120/472 (25.42%), Postives = 209/472 (44.28%), Query Frame = 1 
Query: 1558 QFSVMPGSNPTMLGAPQPSHALM-----------PATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKL-QESSHNEKTMVFREILPH---CYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGS-VIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAF--KDNVYSLSTHSYGCRVIQRILEHCTPEQTA-----------PILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTL---LRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKML----------DVAEQPMRKELMTKIKPHL----GSLRKYTYGKHIINKME 2835
            QFS    S P    A  P  A+             +  S   +H+ + P+  G     GN+ D VT    L+D  AN             +VEFA D++G RF+Q+    E+ ++    +FR+++       +L +++FGN+ +QR  +    E+ +IL + +   +  L L    CRVIQ A++ +       +  EL  + +++   DQNGNHV+QK V+ +P     F++D F   DN+  +    YGCRVIQ  +E  + +Q A            ++A +     +L  +++ NYV+QHV++ G      + + +   L   ++ +S  K+AS+VVE A   A  +    ++NE+ +  IP   +N   R+A                           L  ++  Q+ NYV+Q+M+          D  +  M    + KI   +      L +++ GK II  ++
Sbjct:   73 QFSKWRTSTPMTTPARYPQQAVRLIDLENNASFSKSLNSTTRSHKCTLPIWAG--DGEGNVSDSVT----LQDVLAN-----------DALVEFATDKNGCRFLQEHYPTENDNDVHQKLFRKLVEDRAIFLSLCSNMFGNFFVQRVLECSNTEEQEILTEHLATDLYNLCLDKSACRVIQLAIQKLDVHLATRLSLELRDTHLVRLSIDQNGNHVIQKIVKTLPVSSWTFLVDFFADDDNLIHVCQDKYGCRVIQSTVETLSTDQYAQCYQHRVILLRSLMAGVTRNCTQLASNEFANYVVQHVIKCGDALAVYRDIIIEQCLLQNLLSMSQEKYASHVVEVAFECAPYRLVAEMMNEIFEGYIPHPDTN---RDA---------------------------LDILLFHQYGNYVVQQMIQTCVLGQNARDQKQSEMYGMWLEKIHGRVMRNAHRLERFSSGKKIIEALQ 497
[Close]
BLAST of Pumilio protein vs. Ensembl Celegans
Match: fbf-2 (Fem-3 mRNA-binding factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09312])

HSP 1 Score: 125.561 bits (314), Expect = 2.387e-29
Identity = 101/412 (24.51%), Postives = 188/412 (45.63%), Query Frame = 1 
Query: 1762 TTLTLQEI--AGHVVEFAQDQHGSRFIQQKLQES-SHNEKTMVFREIL---PHCYNLMTDVFGNYVIQRFF-------DLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVREL--EGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIID--AFKDNVYSLSTHSYGCRVIQRILEHCTPEQT----------------APILAELHHFTEELVKDQYGNYVIQHVLEHGKTE--DKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLD--------------------VAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKM 2832
            + L+L E+  +G +++FA D+ G +F+++ ++ S +  +K  +F +++        L T++FGNY++Q          D G  ++ + L + I +Q+  + L  + CRVIQ +L+ +       +V+ L  +  +I    DQN NHV+QK V  +P ++ +FI+D  A  +++  + +  YGCRV+Q I+E  T +                    ++  + +  +EL  ++Y NY+IQH++ +       +  I   L   ++ LS  KFAS+VVEKA  HA  +    +++E+    IP   +                               +  L  MM  QF NYV+Q ML                     ++ Q   K+L +++      L +++ GK +I  +
Sbjct:  181 SRLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGNYLVQSVIGISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACKLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICSDKYGCRVVQTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQHIVSNDDLAVYRECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPLELLAEMMDEIFDGYIPHPDTG------------------------------KDALDIMMFHQFGNYVVQCMLTICCDAVSGRRQTKEGGYDHAISFQDWLKKLHSRVTKERHRLSRFSSGKKMIETL 562
[Close]
BLAST of Pumilio protein vs. Ensembl Fly
Match: pum (gene:FBgn0003165 transcript:FBtr0333668)

HSP 1 Score: 473.396 bits (1217), Expect = 1.135e-150
Identity = 233/376 (61.97%), Postives = 276/376 (73.40%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMK 2850
            RSRLLEDFR  R   L L+++A H+VEF+QDQHGSRFIQQKL+ ++  EK MVF EIL   Y+LMTDVFGNYVIQ+FF+ GTPEQ   LG +++  VLQL+LQMYGCRVIQKALE++S   Q  IV EL+G V+KCVKDQNGNHVVQKC+ECV P  L FII+AFK  VYSLSTH YGCRVIQRILEHCT EQT PIL ELH  TE+L++DQYGNYVIQHVLEHGK EDKS ++  +RG+++ LS HKFASNVVEK V HATR ER  LI+E       V T N                              ++ L+ MMKDQ+ANYV+QKM+DV+E    K+LMTKI+PH+ +LRKYTYGKHI  K+EKYYMK
Sbjct:  480 RSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDE-------VCTFN------------------------------DNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKYYMK 818
[Close]
BLAST of Pumilio protein vs. Ensembl Fly
Match: pum (gene:FBgn0003165 transcript:FBtr0305197)

HSP 1 Score: 473.781 bits (1218), Expect = 1.136e-150
Identity = 233/376 (61.97%), Postives = 276/376 (73.40%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMK 2850
            RSRLLEDFR  R   L L+++A H+VEF+QDQHGSRFIQQKL+ ++  EK MVF EIL   Y+LMTDVFGNYVIQ+FF+ GTPEQ   LG +++  VLQL+LQMYGCRVIQKALE++S   Q  IV EL+G V+KCVKDQNGNHVVQKC+ECV P  L FII+AFK  VYSLSTH YGCRVIQRILEHCT EQT PIL ELH  TE+L++DQYGNYVIQHVLEHGK EDKS ++  +RG+++ LS HKFASNVVEK V HATR ER  LI+E       V T N                              ++ L+ MMKDQ+ANYV+QKM+DV+E    K+LMTKI+PH+ +LRKYTYGKHI  K+EKYYMK
Sbjct:  484 RSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDE-------VCTFN------------------------------DNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKYYMK 822
[Close]
BLAST of Pumilio protein vs. Ensembl Fly
Match: pum (gene:FBgn0003165 transcript:FBtr0081994)

HSP 1 Score: 473.781 bits (1218), Expect = 1.416e-150
Identity = 233/376 (61.97%), Postives = 276/376 (73.40%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMK 2850
            RSRLLEDFR  R   L L+++A H+VEF+QDQHGSRFIQQKL+ ++  EK MVF EIL   Y+LMTDVFGNYVIQ+FF+ GTPEQ   LG +++  VLQL+LQMYGCRVIQKALE++S   Q  IV EL+G V+KCVKDQNGNHVVQKC+ECV P  L FII+AFK  VYSLSTH YGCRVIQRILEHCT EQT PIL ELH  TE+L++DQYGNYVIQHVLEHGK EDKS ++  +RG+++ LS HKFASNVVEK V HATR ER  LI+EV        T N                              ++ L+ MMKDQ+ANYV+QKM+DV+E    K+LMTKI+PH+ +LRKYTYGKHI  K+EKYYMK
Sbjct:  494 RSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVC-------TFN------------------------------DNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKYYMK 832
[Close]
BLAST of Pumilio protein vs. Ensembl Fly
Match: pum (gene:FBgn0003165 transcript:FBtr0081993)

HSP 1 Score: 475.322 bits (1222), Expect = 1.251e-148
Identity = 233/376 (61.97%), Postives = 276/376 (73.40%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMK 2850
            RSRLLEDFR  R   L L+++A H+VEF+QDQHGSRFIQQKL+ ++  EK MVF EIL   Y+LMTDVFGNYVIQ+FF+ GTPEQ   LG +++  VLQL+LQMYGCRVIQKALE++S   Q  IV EL+G V+KCVKDQNGNHVVQKC+ECV P  L FII+AFK  VYSLSTH YGCRVIQRILEHCT EQT PIL ELH  TE+L++DQYGNYVIQHVLEHGK EDKS ++  +RG+++ LS HKFASNVVEK V HATR ER  LI+EV        T N                              ++ L+ MMKDQ+ANYV+QKM+DV+E    K+LMTKI+PH+ +LRKYTYGKHI  K+EKYYMK
Sbjct:  744 RSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVC-------TFN------------------------------DNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKYYMK 1082
[Close]
BLAST of Pumilio protein vs. Ensembl Fly
Match: pum (gene:FBgn0003165 transcript:FBtr0081991)

HSP 1 Score: 475.707 bits (1223), Expect = 7.477e-146
Identity = 233/376 (61.97%), Postives = 276/376 (73.40%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMK 2850
            RSRLLEDFR  R   L L+++A H+VEF+QDQHGSRFIQQKL+ ++  EK MVF EIL   Y+LMTDVFGNYVIQ+FF+ GTPEQ   LG +++  VLQL+LQMYGCRVIQKALE++S   Q  IV EL+G V+KCVKDQNGNHVVQKC+ECV P  L FII+AFK  VYSLSTH YGCRVIQRILEHCT EQT PIL ELH  TE+L++DQYGNYVIQHVLEHGK EDKS ++  +RG+++ LS HKFASNVVEK V HATR ER  LI+EV        T N                              ++ L+ MMKDQ+ANYV+QKM+DV+E    K+LMTKI+PH+ +LRKYTYGKHI  K+EKYYMK
Sbjct: 1092 RSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVC-------TFN------------------------------DNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKYYMK 1430
[Close]
BLAST of Pumilio protein vs. Ensembl Zebrafish
Match: pum2 (pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76])

HSP 1 Score: 475.322 bits (1222), Expect = 1.997e-148
Identity = 234/394 (59.39%), Postives = 283/394 (71.83%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q+  +IVREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAF+  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  +E+L +DQYGNYVIQHVLEHG+ EDKSKIV  +RG+++ LS HKFASNVVEK V H++R ER  LI+EV  Q   P                                    S LY MMKDQ+ANYV+Q+M+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMK+  DLG I    +G+
Sbjct:  823 RSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGP-----------------------------------HSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGSDLGPIGGPTNGL 1181
[Close]
BLAST of Pumilio protein vs. Ensembl Zebrafish
Match: pum1 (pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074])

HSP 1 Score: 473.396 bits (1217), Expect = 5.237e-148
Identity = 235/393 (59.80%), Postives = 282/393 (71.76%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+EIAGHV+EF+QDQHGSRFIQ KL+ +S  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ +Q   L +RIR  VL L+LQMYGCRVIQKALE +    Q+   +VREL+G V+KCVKDQNGNHVVQKC+ECV P  L FIIDAFK  V++LSTH YGCRVIQRILEHC PEQT  IL E+H  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG ++ LS HKFASNVVEK V H+ R ER  LI+EV                  ++ G +                  S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG + +  +G+
Sbjct:  793 RSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLSILEEIHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEV----------------CSMADGPH------------------SALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPLCAPPNGI 1151
[Close]
BLAST of Pumilio protein vs. Ensembl Zebrafish
Match: pum2 (pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76])

HSP 1 Score: 459.529 bits (1181), Expect = 2.348e-142
Identity = 234/421 (55.58%), Postives = 283/421 (67.22%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRF---------------------------IQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRF                           IQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q+  +IVREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAF+  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  +E+L +DQYGNYVIQHVLEHG+ EDKSKIV  +RG+++ LS HKFASNVVEK V H++R ER  LI+EV  Q   P                                    S LY MMKDQ+ANYV+Q+M+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMK+  DLG I    +G+
Sbjct:  823 RSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFKPFFYIPRNTFSYHMSSVLNIRPFSRFIQQKLERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGP-----------------------------------HSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGSDLGPIGGPTNGL 1208
[Close]
BLAST of Pumilio protein vs. Ensembl Zebrafish
Match: pum1 (pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074])

HSP 1 Score: 357.451 bits (916), Expect = 4.622e-106
Identity = 169/250 (67.60%), Postives = 198/250 (79.20%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHK 2466
            RSRLLEDFR NR   L L+EIAGHV+EF+QDQHGSRFIQ KL+ +S  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ +Q   L +RIR  VL L+LQMYGCRVIQKALE +    Q+   +VREL+G V+KCVKDQNGNHVVQKC+ECV P  L FIIDAFK  V++LSTH YGCRVIQRILEHC PEQT  IL E+H  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG ++ LS HK
Sbjct:  793 RSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLSILEEIHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHK 1042

HSP 2 Score: 85.8853 bits (211), Expect = 1.943e-16
Identity = 61/261 (23.37%), Postives = 115/261 (44.06%), Query Frame = 1 
Query: 1999 IRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTA--PILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIK 2775
            I   V++ S   +G R IQ  LE  S   +  +  E+  +  + + D  GN+V+QK  E    +    + +  + +V SL+   YGCRVIQ+ LE    +Q     ++ EL     + VKDQ GN+V+Q  +E  +      I+   +G++  LS H +   V+++ + H   ++  +++ E+ Q T                                           +++DQ+ NYVIQ +L+      + +++++I+
Sbjct:  813 IAGHVMEFSQDQHGSRFIQLKLERASPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLSILEEIHQHT-----------------------------------------EQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIR 1032
[Close]
BLAST of Pumilio protein vs. Ensembl Zebrafish
Match: pum3 (Danio rerio pumilio RNA-binding family member 3 (pum3), mRNA. [Source:RefSeq mRNA;Acc:NM_001353848])

HSP 1 Score: 54.6842 bits (130), Expect = 6.013e-7
Identity = 60/273 (21.98%), Postives = 121/273 (44.32%), Query Frame = 1 
Query: 1798 VEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQ-INIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLS------THSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKA--VAHATRQERQALINEVLQDTIPVSTSNAIMRN 2589
            + FA D   +R +Q  +Q  S  ++  VF E+  H   L    +   ++++F   G+ EQ+  +    + +V Q+        V++ A    + ++Q + +  EL G+    +K  +    ++K +E  P + L+ I+D  K  +  ++       HS   +V     EH   +Q   ++  +      +     G  V  H L HG T+D+  IV  ++  I + ++ ++A  V+  A      T+  +Q +I+E+      VS+ + I+ N
Sbjct:  156 IAFAHD--STRVLQCFIQFGSDKQRKEVFDELKEHIVELSKSKYARNIVKKFLMYGSKEQVGEVMLAFKGKVRQMLRHSEASSVVEYAYNDKAILSQRLMLTEELYGNTFTVLK-SSVCPTLEKVLEANPGK-LESILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFEHAPDKQRTEMIESIREAVVYMAHTHDGARVTMHCLWHGTTKDRKVIVKTMKSYIAKFAMGEYAHLVLLAAFDCIDDTKLVKQIIISEM------VSSLSEIISN 418
[Close]
BLAST of Pumilio protein vs. Ensembl Xenopus
Match: PUM2 (pumilio RNA binding family member 2 [Source:NCBI gene;Acc:100496617])

HSP 1 Score: 486.878 bits (1252), Expect = 2.844e-155
Identity = 237/392 (60.46%), Postives = 286/392 (72.96%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ +S  E+ +VF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  VY LSTH YGCRVIQRILEHCTPEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+++DKSKIV+ +RG+++ LS HKFASNVVEK V H++R ER  LI+E+  Q+  P                                      LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG ++   +GM
Sbjct:  576 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMDQKLALATRIRGHVLPLALQMYGCRVIQKALESISIDQQSEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNVVEKCVTHSSRTERALLIDEICCQNDGP-----------------------------------HCALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYMKNTPDLGPLVGPPNGM 932
[Close]
BLAST of Pumilio protein vs. Ensembl Xenopus
Match: PUM2 (pumilio RNA binding family member 2 [Source:NCBI gene;Acc:100496617])

HSP 1 Score: 486.108 bits (1250), Expect = 6.958e-153
Identity = 237/392 (60.46%), Postives = 286/392 (72.96%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ +S  E+ +VF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  VY LSTH YGCRVIQRILEHCTPEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+++DKSKIV+ +RG+++ LS HKFASNVVEK V H++R ER  LI+E+  Q+  P                                      LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG ++   +GM
Sbjct:  773 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMDQKLALATRIRGHVLPLALQMYGCRVIQKALESISIDQQSEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNVVEKCVTHSSRTERALLIDEICCQNDGP-----------------------------------HCALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYMKNTPDLGPLVGPPNGM 1129
[Close]
BLAST of Pumilio protein vs. Ensembl Xenopus
Match: ambra1 (autophagy/beclin-1 regulator 1 [Source:Xenbase;Acc:XB-GENE-984578])

HSP 1 Score: 480.33 bits (1235), Expect = 9.786e-153
Identity = 237/391 (60.61%), Postives = 281/391 (71.87%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+EIAGH++EF+QDQHGSRFIQ KL+ ++  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ EQ   L +RIR  VL L+LQMYGCRVIQKALE +    Q  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V++LSTH YGCRVIQRILEHC PEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV  +RG ++ LS HKFASNVVEK V HA+R ER  LI+EV             M +                          S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG +   ++G+
Sbjct:  584 RSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEV-----------CTMNDGP-----------------------HSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGMDLGPMCGPSNGI 940
[Close]
BLAST of Pumilio protein vs. Ensembl Xenopus
Match: PUM2 (pumilio RNA binding family member 2 [Source:NCBI gene;Acc:100496617])

HSP 1 Score: 483.026 bits (1242), Expect = 2.854e-152
Identity = 237/392 (60.46%), Postives = 286/392 (72.96%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ +S  E+ +VF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  VY LSTH YGCRVIQRILEHCTPEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+++DKSKIV+ +RG+++ LS HKFASNVVEK V H++R ER  LI+E+  Q+  P                                      LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG ++   +GM
Sbjct:  721 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMDQKLALATRIRGHVLPLALQMYGCRVIQKALESISIDQQSEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNVVEKCVTHSSRTERALLIDEICCQNDGP-----------------------------------HCALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYMKNTPDLGPLVGPPNGM 1077
[Close]
BLAST of Pumilio protein vs. Ensembl Xenopus
Match: PUM2 (pumilio RNA binding family member 2 [Source:NCBI gene;Acc:100496617])

HSP 1 Score: 482.641 bits (1241), Expect = 3.140e-152
Identity = 237/394 (60.15%), Postives = 288/394 (73.10%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQIN--IVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ +S  E+ +VF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q++  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  VY LSTH YGCRVIQRILEHCTPEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+++DKSKIV+ +RG+++ LS HKFASNVVEK V H++R ER  LI+E+  Q+  P                                      LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG ++   +GM
Sbjct:  706 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMDQKLALATRIRGHVLPLALQMYGCRVIQKALESISIDQQVSSEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNVVEKCVTHSSRTERALLIDEICCQNDGP-----------------------------------HCALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYMKNTPDLGPLVGPPNGM 1064
[Close]
BLAST of Pumilio protein vs. Ensembl Mouse
Match: Pum2 (pumilio RNA-binding family member 2 [Source:MGI Symbol;Acc:MGI:1931751])

HSP 1 Score: 481.871 bits (1239), Expect = 6.918e-153
Identity = 237/392 (60.46%), Postives = 285/392 (72.70%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ +VF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  628 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 984
[Close]
BLAST of Pumilio protein vs. Ensembl Mouse
Match: Pum2 (pumilio RNA-binding family member 2 [Source:MGI Symbol;Acc:MGI:1931751])

HSP 1 Score: 481.871 bits (1239), Expect = 6.918e-153
Identity = 237/392 (60.46%), Postives = 285/392 (72.70%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ +VF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  628 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 984
[Close]
BLAST of Pumilio protein vs. Ensembl Mouse
Match: Pum2 (pumilio RNA-binding family member 2 [Source:MGI Symbol;Acc:MGI:1931751])

HSP 1 Score: 481.485 bits (1238), Expect = 8.257e-153
Identity = 237/392 (60.46%), Postives = 285/392 (72.70%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ +VF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  623 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 979
[Close]
BLAST of Pumilio protein vs. Ensembl Mouse
Match: Pum1 (pumilio RNA-binding family member 1 [Source:MGI Symbol;Acc:MGI:1931749])

HSP 1 Score: 479.559 bits (1233), Expect = 1.785e-152
Identity = 237/391 (60.61%), Postives = 282/391 (72.12%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+EIAGH++EF+QDQHGSRFIQ KL+ ++  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ EQ   L +RIR  VL L+LQMYGCRVIQKALE +    Q  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V++LSTH YGCRVIQRILEHC P+QT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV  +RG ++ LS HKFASNVVEK V HA+R ER  LI+EV                  ++ G +                  S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG I    +G+
Sbjct:  587 RSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEV----------------CTMNDGPH------------------SALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGI 943
[Close]
BLAST of Pumilio protein vs. Ensembl Mouse
Match: Pum1 (pumilio RNA-binding family member 1 [Source:MGI Symbol;Acc:MGI:1931749])

HSP 1 Score: 479.559 bits (1233), Expect = 1.785e-152
Identity = 237/391 (60.61%), Postives = 282/391 (72.12%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+EIAGH++EF+QDQHGSRFIQ KL+ ++  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ EQ   L +RIR  VL L+LQMYGCRVIQKALE +    Q  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V++LSTH YGCRVIQRILEHC P+QT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV  +RG ++ LS HKFASNVVEK V HA+R ER  LI+EV                  ++ G +                  S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG I    +G+
Sbjct:  587 RSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEV----------------CTMNDGPH------------------SALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGI 943
[Close]
BLAST of Pumilio protein vs. UniProt/SwissProt
Match: sp|E3WDQ9|PUM2_XENLA (Pumilio homolog 2 OS=Xenopus laevis OX=8355 GN=pum2 PE=1 SV=1)

HSP 1 Score: 484.952 bits (1247), Expect = 2.410e-151
Identity = 237/392 (60.46%), Postives = 288/392 (73.47%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ +S  E+ +VF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FII+AFK  VY LSTH YGCRVIQRILEHCTPEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+++DKSKIV  +RG+++ LS HKFASNVVEK V H++R ER  LI+E+  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN+ DLG ++  ++GM
Sbjct:  816 RSRLLEDFRNNRFPNLQLRDLMGHIVEFSQDQHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMDQKLALATRIRGHVLPLALQMYGCRVIQKALESISTDQQSEMVRELDGHVLKCVKDQNGNHVVQKCIECVTPQSLHFIIEAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEELHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVCEVRGQVLVLSQHKFASNVVEKCVTHSSRTERAFLIDEICCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYMKNSPDLGLLVGPSNGM 1172
[Close]
BLAST of Pumilio protein vs. UniProt/SwissProt
Match: sp|Q8TB72|PUM2_HUMAN (Pumilio homolog 2 OS=Homo sapiens OX=9606 GN=PUM2 PE=1 SV=2)

HSP 1 Score: 479.559 bits (1233), Expect = 1.979e-150
Identity = 238/394 (60.41%), Postives = 286/394 (72.59%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q+   +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 1065
[Close]
BLAST of Pumilio protein vs. UniProt/SwissProt
Match: sp|Q80U58|PUM2_MOUSE (Pumilio homolog 2 OS=Mus musculus OX=10090 GN=Pum2 PE=1 SV=2)

HSP 1 Score: 478.789 bits (1231), Expect = 3.868e-150
Identity = 237/394 (60.15%), Postives = 286/394 (72.59%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ +VF EIL   Y LMTDVFGNYVIQ+FF+ G+ +Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q+   +V+EL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG+++ LS HKFASNVVEK V HA+R ER  LI+EV  Q+  P                                    S LY MMKDQ+ANYV+QKM+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYY+KN+ DLG I    +GM
Sbjct:  707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGP-----------------------------------HSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGM 1065
[Close]
BLAST of Pumilio protein vs. UniProt/SwissProt
Match: sp|Q14671|PUM1_HUMAN (Pumilio homolog 1 OS=Homo sapiens OX=9606 GN=PUM1 PE=1 SV=3)

HSP 1 Score: 479.174 bits (1232), Expect = 4.491e-149
Identity = 237/391 (60.61%), Postives = 280/391 (71.61%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+EIAGH++EF+QDQHGSRFIQ KL+ ++  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ EQ   L +RIR  VL L+LQMYGCRVIQKALE +    Q  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V++LSTH YGCRVIQRILEHC P+QT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV  +RG ++ LS HKFASNVVEK V HA+R ER  LI+EV             M +                          S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG I    +G+
Sbjct:  829 RSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEV-----------CTMNDGP-----------------------HSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGI 1185
[Close]
BLAST of Pumilio protein vs. UniProt/SwissProt
Match: sp|Q5R5X3|PUM1_PONAB (Pumilio homolog 1 OS=Pongo abelii OX=9601 GN=PUM1 PE=2 SV=1)

HSP 1 Score: 478.789 bits (1231), Expect = 6.740e-149
Identity = 237/391 (60.61%), Postives = 280/391 (71.61%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+EIAGH++EF+QDQHGSRFIQ KL+ ++  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ EQ   L +RIR  VL L+LQMYGCRVIQKALE +    Q  +VREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAFK  V++LSTH YGCRVIQRILEHC P+QT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV  +RG ++ LS HKFASNVVEK V HA+R ER  LI+EV             M +                          S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG I    +G+
Sbjct:  829 RSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEV-----------CTMNDGP-----------------------HSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGI 1185
[Close]
BLAST of Pumilio protein vs. TrEMBL
Match: A0A172RVP5 (Pumilio protein (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 1648.64 bits (4268), Expect = 0.000e+0
Identity = 928/928 (100.00%), Postives = 928/928 (100.00%), Query Frame = 1 
Query:  130 MSDFHENTTERNPSGINPNVATCQIANSSIYNSLGQVSTVISNXXXXXXXXXXXXXXDEWSMPGLSLSNTTEQLTRQISQLSFDDHNAYWPPQLGMPMSGDNRAWDTSENSISQPIPMHHGRRDTLGNDSGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENFYSNPSSNFGYSNGNAQPFPQSPPHYYLPSSQLYQPSTLCGTPENSQVFGCXXXXXXXXXXXXXXXXXXXXXXFFDPAIIAASFSNXXXXXXXXXXXXXXXXXXXXXXXSHSDYMTGEPTSPLHSKQPDEEQNQYIWSPGANNGMVHDYMSGNTAPTYGYHQQAPIYDRPTSALPTQQLYASQNGALHHGTQTSQIQNQSAAAALFARSLYLAALGSGHVXXXXXXXXXXXXXXNLVPDALHTLTSMLAHXXXXXXXXXXXXXXXXXXXXXXLIGQNQXXXXXXXXXMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 2913
            MSDFHENTTERNPSGINPNVATCQIANSSIYNSLGQVSTVISNVPSGPYYSSSYVYPDEWSMPGLSLSNTTEQLTRQISQLSFDDHNAYWPPQLGMPMSGDNRAWDTSENSISQPIPMHHGRRDTLGNDSGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENFYSNPSSNFGYSNGNAQPFPQSPPHYYLPSSQLYQPSTLCGTPENSQVFGCNNQQNQQSISQQPQQQSSANQQFFDPAIIAASFSNAGQGYPPQQQAPQGLPPPPGLAPSHSDYMTGEPTSPLHSKQPDEEQNQYIWSPGANNGMVHDYMSGNTAPTYGYHQQAPIYDRPTSALPTQQLYASQNGALHHGTQTSQIQNQSAAAALFARSLYLAALGSGHVPPATQQMPPQQQPPNLVPDALHTLTSMLAHSSNSYGQQPQQQPPNFPSSQNNLIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM
Sbjct:    1 MSDFHENTTERNPSGINPNVATCQIANSSIYNSLGQVSTVISNVPSGPYYSSSYVYPDEWSMPGLSLSNTTEQLTRQISQLSFDDHNAYWPPQLGMPMSGDNRAWDTSENSISQPIPMHHGRRDTLGNDSGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENFYSNPSSNFGYSNGNAQPFPQSPPHYYLPSSQLYQPSTLCGTPENSQVFGCNNQQNQQSISQQPQQQSSANQQFFDPAIIAASFSNAGQGYPPQQQAPQGLPPPPGLAPSHSDYMTGEPTSPLHSKQPDEEQNQYIWSPGANNGMVHDYMSGNTAPTYGYHQQAPIYDRPTSALPTQQLYASQNGALHHGTQTSQIQNQSAAAALFARSLYLAALGSGHVPPATQQMPPQQQPPNLVPDALHTLTSMLAHSSNSYGQQPQQQPPNFPSSQNNLIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 928
[Close]
BLAST of Pumilio protein vs. TrEMBL
Match: Q564I9 (Pumilio homolog OS=Dugesia japonica OX=6161 GN=pum PE=4 SV=1)

HSP 1 Score: 1550.41 bits (4013), Expect = 0.000e+0
Identity = 862/928 (92.89%), Postives = 883/928 (95.15%), Query Frame = 1 
Query:  130 MSDFHENTTERNPSGINPNVATCQIANSSIYNSLGQVSTVISNXXXXXXXXXXXXXXDEWSMPGLSLSNTTEQLTRQISQLSFDDHNAYWPPQLGMPMSGDNRAWDTSENSISQPIPMHHGRRDTLGNDSGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENFYSNPSSNFGYSNGNAQPFPQSPPHYYLPSSQLYQPSTLCGTPENSQVFGCXXXXXXXXXXXXXXXXXXXXXXFFDPAIIAASFSNXXXXXXXXXXXXXXXXXXXXXXXSHSDYMTGEPTSPLHSKQPDEEQNQYIWSPGANNGMVHDYMSGNTAPTYGYHQQAPIYDRPTSALPTQQLYASQNGALHHGTQTSQIQNQSAAAALFARSLYLAALGSGHVXXXXXXXXXXXXXXNLVPDALHTLTSMLAHXXXXXXXXXXXXXXXXXXXXXXLIGQNQXXXXXXXXXMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 2913
            MSDFHENTTERNPSGINPNVATCQIANSSIYN LGQVSTVISNVP+GPYYSSS+VY D+WSMPGLSLSNTTEQLTRQISQLS+DDH+AYWPP L MP+SGDNR WDTSENSISQPIPMH GRRDTLGN+SGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENFY+NPSSNFGYSNGNAQPFPQSPPHYYLPSSQLYQPSTLCGTPENSQVFGCNNQQNQ    Q  QQ S+  Q FFDPAIIAASFSNAGQGYPPQQQAPQGLPPPPGLAPSHSDYMTGEPTSPLH+KQPDEEQNQYIWSPG NNGMVHD+M GN  PTYGYHQQAP+YDRPTSALPTQQLYASQNG LHHGTQTSQIQNQSAAAALFARSLYLAALGSGHVPPATQQM PQQQPP+LVPDALHTLTSMLAH SNSYGQQPQQQP    S  N LIGQNQAALSALSAAM+GYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSH LMPATGSQ+I+HQG+KPMQ GYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQ+I+GHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILP CY+LMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIV LLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQD+IPVS SNAIMR ADVS  VYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELM KI PHLGSLRK   GKHIINKMEKYYMK NQDL GILSSNSGMACVGHM
Sbjct:    1 MSDFHENTTERNPSGINPNVATCQIANSSIYNPLGQVSTVISNVPNGPYYSSSFVYSDDWSMPGLSLSNTTEQLTRQISQLSYDDHSAYWPPHLSMPLSGDNRTWDTSENSISQPIPMHPGRRDTLGNESGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENFYNNPSSNFGYSNGNAQPFPQSPPHYYLPSSQLYQPSTLCGTPENSQVFGCNNQQNQSISQQPQQQSSANQQ-FFDPAIIAASFSNAGQGYPPQQQAPQGLPPPPGLAPSHSDYMTGEPTSPLHNKQPDEEQNQYIWSPGTNNGMVHDFMGGNPGPTYGYHQQAPLYDRPTSALPTQQLYASQNGTLHHGTQTSQIQNQSAAAALFARSLYLAALGSGHVPPATQQMAPQQQPPSLVPDALHTLTSMLAHGSNSYGQQPQQQPNFPSSQNN-LIGQNQAALSALSAAMSGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHTLMPATGSQLISHQGNKPMQSGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQDISGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPQCYSLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDSIPVSASNAIMRTADVSGVVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMPKINPHLGSLRKSPSGKHIINKMEKYYMKTNQDL-GILSSNSGMACVGHM 925
[Close]
BLAST of Pumilio protein vs. TrEMBL
Match: V5KXM5 (PUM protein OS=Polycelis yangchengensis (nomen nudum) OX=1420663 GN=pum PE=2 SV=1)

HSP 1 Score: 859.751 bits (2220), Expect = 0.000e+0
Identity = 474/640 (74.06%), Postives = 522/640 (81.56%), Query Frame = 1 
Query: 1006 LHSKQPDEEQNQYIWSPGANNGMVHDYMSGNTAPTYGYHQQAPIYDRPTSALPTQQLYASQNGALHHGTQTSQIQNQSAAAALFARSLYLAALGSGHVXXXXXXXXXXXXXXNLVPDALHTLTSMLAHXXXXXXXXXXXXXXXXXXXXXXLIGQNQXXXXXXXXXMTGYFLSPQIGTHAPPPTQQFSVMPGSNP-TMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVG--NLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIM-RNADVSSGVYXXXXXXXXXXXXXXVQ-RESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGH 2910
            +H K P+E+Q QY+WSPGA+NGM+HDYM G   PTYGYHQ  PIYDRP    P+ Q+YA QNG++H+  Q  Q+Q+Q+AAAALFARSLYLAALGSGHVPPA Q M  Q     LVPDALHT+ SMLAH    YGQ PQ Q      +    IG NQAALSALSAAM+GYFL  Q+  H     Q FSV+PG+ P +MLG  Q  H +    GSQ++    +K  Q GYK   G    KDG+ RSRLLEDFRANRLT ++LQE+ GHVVEFAQDQHGSRFIQQKLQE+SHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILG+RIRNQVLQLSLQMYGCRVIQKALETVSK TQI+IV ELEGSVIKCVKDQNGNHVVQKCVECVP +HL+FIID+FKDNVYS STHSYGCRVIQRILEHCT EQTA IL ELHHFT+ELVKDQYGNYVIQHVLEHG+TEDKSKIV LL+GRIVELSIHKFASNVVEKA+AHATRQERQ LI EVLQD IPV+T+N +  RN + SS  YGSETDGSD D  GS   RESVLYWMMKDQFANYVIQKMLDVAEQPMRKELM +IKP+L +LRK+TYGKHIINKMEKYYMKNNQDL GI+  N     VGH
Sbjct:    1 MHGKHPEEDQAQYLWSPGASNGMMHDYMGGPAGPTYGYHQAGPIYDRP----PSAQIYAGQNGSMHNPGQQPQLQSQNAAAALFARSLYLAALGSGHVPPAPQTMSQQGP--GLVPDALHTIQSMLAHGGTPYGQPPQAQSTQGYPNNQ--IGSNQAALSALSAAMSGYFLPAQMTGHPSGSQQSFSVVPGAPPPSMLGPAQSGHPI----GSQLVPQSNNKQAQVGYK-CAGPPTQKDGIARSRLLEDFRANRLTQISLQELTGHVVEFAQDQHGSRFIQQKLQEASHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGERIRNQVLQLSLQMYGCRVIQKALETVSKQTQISIVHELEGSVIKCVKDQNGNHVVQKCVECVPSDHLNFIIDSFKDNVYSPSTHSYGCRVIQRILEHCTQEQTASILTELHHFTDELVKDQYGNYVIQHVLEHGRTEDKSKIVNLLKGRIVELSIHKFASNVVEKAIAHATRQERQILITEVLQDNIPVATANELFQRNTEASSAQYGSETDGSDNDVSGSGGPRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMQRIKPYLNNLRKFTYGKHIINKMEKYYMKNNQDL-GIMGVNCSGITVGH 626
[Close]
BLAST of Pumilio protein vs. TrEMBL
Match: A0A1W6I1A2 (Pumilio PUf family-like protein (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 610.142 bits (1572), Expect = 0.000e+0
Identity = 309/315 (98.10%), Postives = 310/315 (98.41%), Query Frame = 1 
Query: 1876 MVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHI 2820
            MVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRI NQVLQLS QMYGCRVIQKALETVS  TQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEH DFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQD+IPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHI
Sbjct:    1 MVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIXNQVLQLSXQMYGCRVIQKALETVSXXTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHPDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDSIPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHI 315

HSP 2 Score: 85.1149 bits (209), Expect = 5.915e-14
Identity = 51/181 (28.18%), Postives = 88/181 (48.62%), Query Frame = 1 
Query: 1783 IAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAEL 2325
            I   V++ +   +G R IQ+ L+  S   +  + RE+       + D  GN+V+Q+  +   PE    + D  ++ V  LS   YGCRVIQ+ LE  +      I+ EL     + VKDQ GN+V+Q  +E    E    I+   +  +  LS H +   V+++ + H T ++   ++ E+
Sbjct:   42 IXNQVLQLSXQMYGCRVIQKALETVSXXTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHPDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV 222
[Close]
BLAST of Pumilio protein vs. TrEMBL
Match: A0A504YDE7 (Maternal protein pumilio OS=Fasciola gigantica OX=46835 GN=FGIG_02912 PE=4 SV=1)

HSP 1 Score: 582.408 bits (1500), Expect = 0.000e+0
Identity = 277/380 (72.89%), Postives = 314/380 (82.63%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXX-XXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQ 2859
            RSRLLE+FR  RL  LTL+++  H+VEFAQDQ+GSRFIQQKL+++S  +KT VFREILPH YNLM DVFGNYVIQ+FF+LGTPEQ QILG RIR QVL LSLQMYGCRVIQKA+E+V    QI I+REL+G VIKCVKDQNGNHVVQKCVE VP EHL FI+D+FKD+V+S+STHSYGCRVIQRILEHCTPEQTAPILAELH  TE LVKDQYGNYVIQHVLEHGKTEDKS+IV L+RGR+ ELS+HKFASNVVEKAVA+ATR ERQALINEVL+D   +  S ++       SG + +  +            R S L  MMKDQFANYV+QKMLDVAEQP+RKELM +I+PHL SLRKYTYGKHIINKMEKYYMK NQ
Sbjct: 1051 RSRLLEEFRNARLPYLTLRDLTNHIVEFAQDQYGSRFIQQKLEQASAVDKTAVFREILPHAYNLMVDVFGNYVIQKFFELGTPEQKQILGQRIRGQVLSLSLQMYGCRVIQKAVESVPLDMQITIIRELDGCVIKCVKDQNGNHVVQKCVESVPAEHLQFIVDSFKDHVHSISTHSYGCRVIQRILEHCTPEQTAPILAELHQHTESLVKDQYGNYVIQHVLEHGKTEDKSRIVDLIRGRVAELSVHKFASNVVEKAVANATRAERQALINEVLEDNRELPESASMSNGIRPRSGEFPALSSSSDGGASTDDTGRGSTLCMMMKDQFANYVVQKMLDVAEQPIRKELMNQIRPHLSSLRKYTYGKHIINKMEKYYMKTNQ 1430

HSP 2 Score: 62.7734 bits (151), Expect = 5.523e-6
Identity = 46/132 (34.85%), Postives = 67/132 (50.76%), Query Frame = 1 
Query:  304 EWSMPGLSLSNTTEQLTRQISQLSFDDHNAYWPPQLGMPMSGDNRA----------WDTSENSISQPIPMHHGRRD--TLGN-------DSGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENF 642
            EW +   S+SN  E L   ++ LSF++    W     +P S D             W+    ++SQ IPM    R+   + N       +SG  MSP SK+M ALGMQ+V++VLS+SPG G +   D+ EN+
Sbjct:   51 EW-VTAQSVSNP-EDLVTSMAGLSFEETRMLWSNGSVLPTSQDTPGIKSLSLNSLPWELPR-AVSQSIPMGSNNRERAAVNNFPESGMVESGLLMSPGSKDMAALGMQMVDQVLSNSPGNGALLLRDLTENY 179
[Close]
BLAST of Pumilio protein vs. Ensembl Cavefish
Match: pum1 (pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074])

HSP 1 Score: 477.633 bits (1228), Expect = 2.686e-149
Identity = 237/393 (60.31%), Postives = 283/393 (72.01%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+EIAGHV+EF+QDQHGSRFIQ KL+ +S  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ +Q   L +RIR  VL L+LQMYGCRVIQKALE +    Q+   +VREL+G V+KCVKDQNGNHVVQKC+ECV P  L FIIDAFK  V++LSTH YGCRVIQRILEHC PEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG ++ LS HKFASNVVEK V H+ R ER  LI+EV                  ++ G +                  S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG + +  +G+
Sbjct:  835 RSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEV----------------CSMADGPH------------------SALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPLCAPPNGI 1193
[Close]
BLAST of Pumilio protein vs. Ensembl Cavefish
Match: pum1 (pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074])

HSP 1 Score: 420.239 bits (1079), Expect = 8.761e-128
Identity = 212/352 (60.23%), Postives = 250/352 (71.02%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKI 2772
            RSRLLEDFR NR   L L+EIAGHV+EF+QDQHGSRFIQ KL+ +S  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ +Q   L +RIR  VL L+LQMYGCRVIQKALE +    Q+   +VREL+G V+KCVKDQNGNHVVQKC+ECV P  L FIIDAFK  V++LSTH YGCRVIQRILEHC PEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV+ +RG ++ LS HKFASNVVEK V H+ R ER  LI+EV                  ++ G +                  S LY MMKDQ+ANYV+QKM+DVAE   RK +M K+
Sbjct:  835 RSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEV----------------CSMADGPH------------------SALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKV 1152
[Close]
BLAST of Pumilio protein vs. Ensembl Sea Lamprey
Match: pum2 (pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76])

HSP 1 Score: 481.485 bits (1238), Expect = 1.324e-152
Identity = 244/447 (54.59%), Postives = 305/447 (68.23%), Query Frame = 1 
Query: 1561 FSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
             S  PG+          + +L   +GSQ+        ++P Y      +  G  RSRLLEDFR NR   L L+++AGH+VEF+QDQHGSRFIQQKL+ +   E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+P+Q Q L  RIR  VL L+LQMYGCRVIQKALE++    Q+   +V EL+G V+KCVKDQNGNHVVQKC+ECVPP  L FIIDAFK  V++LSTH YGCRVIQRILEHCTP+QT  IL ELH  TE+LV+DQYGNYVIQHVLEHG++EDKSKIV  +RG+++ LS HKFASNV+EK + H +R ER  LI EV                  ++ G +                  + LY MMKDQ+ANYV+QKM+D+AE   RK LM KI+PH+ +LRKYTYGKHI+ K+EKY++KN+ DLG I +  +G+
Sbjct:  674 ISAAPGAEAKYRSLSGTTSSLFGGSGSQLFPT-----LRPRYTHKTEMMPTG--RSRLLEDFRNNRFPNLQLRDLAGHIVEFSQDQHGSRFIQQKLERAIPAERQMVFAEILQSAYQLMTDVFGNYVIQKFFEFGSPDQKQALAQRIRGHVLPLALQMYGCRVIQKALESIPPEQQVLNEMVLELDGHVLKCVKDQNGNHVVQKCIECVPPHSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCTPDQTQAILEELHQHTEQLVQDQYGNYVIQHVLEHGRSEDKSKIVAEMRGKVLILSQHKFASNVIEKCITHTSRAERALLIEEV----------------CTMTDGPH------------------TALYSMMKDQYANYVVQKMIDMAEPTQRKILMHKIRPHIPTLRKYTYGKHILAKLEKYFVKNSTDLGPIGAPPNGI 1079
[Close]
BLAST of Pumilio protein vs. Ensembl Yeast
Match: PUF3 (Protein of the mitochondrial outer surface; links the Arp2/3 complex with the mitochore during anterograde mitochondrial movement; also binds to and promotes degradation of mRNAs for select nuclear-encoded mitochondrial proteins [Source:SGD;Acc:S000003936])

HSP 1 Score: 288.886 bits (738), Expect = 1.594e-83
Identity = 155/370 (41.89%), Postives = 226/370 (61.08%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLT-----LQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKS------KIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRK 2799
            RS LLE  R +     +     L++I GH +EF +DQHGSRFIQ++L  S  +EK ++F EI      L  DVFGNYVIQ+FF+ G+  Q   L D+ +  + QLSLQMY CRVIQKALE +    +I +V EL  SV++ +KDQNGNHV+QK +E +P E L FI+ +   ++Y LSTHSYGCRVIQR+LE  + E    IL EL  F   L++DQYGNYVIQ+VL+  +  +K       +I+  +   +VE S HKFASNVVEK++ + ++ ++  +I+++L    P   ++A+                        +++ +S +  M+KDQFANYVIQK+++V+E   +K ++  I+ +L  L K
Sbjct:  514 RSPLLEQLRNSSSDKNSNSNMSLKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYSKHKFASNVVEKSILYGSKNQKDLIISKIL----PRDKNHAL------------------------NLEDDSPMILMIKDQFANYVIQKLVNVSEGEGKKLIVIAIRAYLDKLNK 855

HSP 2 Score: 56.6102 bits (135), Expect = 2.040e-8
Identity = 48/195 (24.62%), Postives = 87/195 (44.62%), Query Frame = 1 
Query: 2251 YGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALI----NEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHII 2823
            +G R IQR L      +   I  E+     EL  D +GNYVIQ   E G    K+ +V   +G + +LS+  +A  V++KA+ +    +R  L+    + VLQ  I     N +++ A  +  +       S   G         +Y +    +   VIQ++L+      ++ ++ ++K  +  L +  YG ++I
Sbjct:  551 HGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQ-MIKDQNGNHVIQKAIETIPIEKLPFILSSLTGH--------IYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVI 736
[Close]
BLAST of Pumilio protein vs. Ensembl Yeast
Match: PUF4 (Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors [Source:SGD;Acc:S000002982])

HSP 1 Score: 189.119 bits (479), Expect = 1.005e-49
Identity = 119/376 (31.65%), Postives = 188/376 (50.00%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRE-LEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVL----EHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQP---MRKELMTKIKPHL-GSLRKYTYGKHII 2823
            + R +E+  ++R     L +  G +    +DQHG RF+Q++L          +F E   +   LMTD FGNY+IQ+  +  T EQ  +L        +++SL  +G R +QK +E +    +  IV + L    ++  KD NGNHV+QKC++ + PE+  FI DA  D+   ++TH +GC V+QR L+H T EQ   +  +L    ++L  D +GNYV+Q+++    E  K +   KIV LL+ R +ELSIHKF SNV+EK +  A   E   +I E+L +                                      E+ +  ++ D + NYV+Q  LD++ +    + K L   + P L G +R   +GK II
Sbjct:  546 KQRKIEE--SSRFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAIVSE--PMILEILNNG------------------------------------GETGIQSLLNDSYGNYVLQTALDISHKQNDYLYKRLSEIVAPLLVGPIRNTPHGKRII 881
[Close]
BLAST of Pumilio protein vs. Ensembl Yeast
Match: MPT5 (mRNA-binding protein of the PUF family; binds to specific mRNAs, often in the 3' UTR; has broad specificity and binds to more than 1000 mRNAs (16% of the transcriptome); recruits the CCR4-NOT deadenylase complex to mRNAs along with Dhh1p and Dcp1p to promote deadenylation, decapping, and decay; also interacts with the Caf20p translational initiation repressor, affecting its mRNA target specificity [Source:SGD;Acc:S000003146])

HSP 1 Score: 172.94 bits (437), Expect = 1.037e-44
Identity = 106/325 (32.62%), Postives = 172/325 (52.92%), Query Frame = 1 
Query: 1798 VEFAQDQHGSRFIQQKLQESSHNE--KTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIV-----RELEG--SVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAF--KDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDK--SKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDV 2733
            ++ A DQ G RF+Q+KL+  S +   + +++ +I P   +L+ D FGNY++Q+  D  T EQ  +L   I   V Q+S+  YG R +QK ++TV    QI+++     +E      V+  + D NGNHV+QKC+    P    FIIDA   ++N+ ++STH +GC V+Q++L  CT +Q   I  ++  F   L+ DQ+GNY+IQ +L+  + +    +++   L   + +LS  KF+SNVVEK +    R         ++   I  +   A  R A  S  V  +  +   T         +VL   ++D F NY +Q +LDV
Sbjct:  216 IKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFNRLSNELCQLSCLKFSSNVVEKFIKKLFR---------IITGFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLNVL---IRDNFGNYALQTLLDV 528
[Close]
BLAST of Pumilio protein vs. Ensembl Yeast
Match: PUF2 (PUF family mRNA-binding protein; Pumilio homology domain confers RNA binding activity; preferentially binds mRNAs encoding membrane-associated proteins; binding site composed of two UAAU tetranucleotides, separated by a 3-nt linker; PUF2 has a paralog, JSN1, that arose from the whole genome duplication [Source:SGD;Acc:S000006246])

HSP 1 Score: 53.5286 bits (127), Expect = 1.852e-7
Identity = 49/199 (24.62%), Postives = 89/199 (44.72%), Query Frame = 1 
Query: 1912 LMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRE-LEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEH---CTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVT--LLRGRIVELSIHKFASNVVEK 2490
            L +D  GN VIQ+ F+  +     I+  +    +  + +   G  V QK ++  +   QIN+V   +         DQ GN+V+Q  ++   P +  FI ++   + +++  + YG R ++  LE     T  Q   I + +   +  L  D  G  +I  +L+     +K+ I+   L+   +V+L  HK  S  V K
Sbjct:  584 LSSDYLGNTVIQKLFENSSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTPLFNDQFGNYVIQGILKFGFPWN-SFIFESVLSHFWTIVQNRYGSRAVRACLEADSIITQCQLLTITSLIIVLSPYLATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLCCHKLGSLTVLK 781
[Close]
BLAST of Pumilio protein vs. Ensembl Nematostella
Match: EDO42807 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0B8])

HSP 1 Score: 452.595 bits (1163), Expect = 7.595e-151
Identity = 230/375 (61.33%), Postives = 270/375 (72.00%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYM 2847
            RSRLLEDFR NR   + L+++AGH+VEF+QDQHGSRFIQQKL+ +++ EK +VF EILP  Y+LMTDVFGNYVIQ+FF+ G+ EQ   L   IR  VL L+LQMYGCRVIQKALE +    Q  +V EL+G V+KCVKDQNGNHVVQKC+ECV P  L FIIDAF+  VY+LSTH YGCRVIQRILEHC  EQT PIL E+H  T+ LV+DQYGNYVIQHVLEHG  ED+SKIV  LRG I+ LS HKFASNVVEK V+ A+R ER  LI+E       V  +N    NA                           LY MMKDQFANYV+QKM+DVAE   RK LM +I+PH+ +LRKYTYGKHI+ K+EKYYM
Sbjct:    2 RSRLLEDFRNNRYPNIQLRDLAGHIVEFSQDQHGSRFIQQKLERATNGEKHLVFHEILPAAYSLMTDVFGNYVIQKFFEFGSEEQKHHLASCIRGHVLPLALQMYGCRVIQKALECIPPNVQHELVMELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIIDAFQGQVYALSTHPYGCRVIQRILEHCLTEQTLPILNEMHDQTDRLVQDQYGNYVIQHVLEHGTPEDRSKIVMQLRGNILPLSQHKFASNVVEKCVSFASRTERALLIDE-------VCNTNDGPHNA---------------------------LYTMMKDQFANYVVQKMIDVAEPAQRKLLMHRIRPHVATLRKYTYGKHILAKLEKYYM 342
[Close]
BLAST of Pumilio protein vs. Ensembl Medaka
Match: pum2 (pumilio RNA binding family member 2 [Source:NCBI gene;Acc:100335142])

HSP 1 Score: 476.478 bits (1225), Expect = 4.616e-151
Identity = 234/392 (59.69%), Postives = 283/392 (72.19%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+P+Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q +IVREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAF+  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  +E+L +DQYGNYVIQHVLEHG+ EDKSKIV  +RG+++ LS HKFASNVVEK V H++R ER  LI+EV  Q   P                                    S LY MMKDQ+ANYV+Q+M+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMK+  +LG I    +G+
Sbjct:  619 RSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSPDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQGDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGP-----------------------------------HSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGTELGPIGGPTNGL 975
[Close]
BLAST of Pumilio protein vs. Ensembl Medaka
Match: pum2 (pumilio RNA binding family member 2 [Source:NCBI gene;Acc:100335142])

HSP 1 Score: 474.167 bits (1219), Expect = 2.991e-148
Identity = 234/394 (59.39%), Postives = 284/394 (72.08%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEV-LQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L+++ GH+VEF+QDQHGSRFIQQKL+ ++  E+ MVF EIL   Y LMTDVFGNYVIQ+FF+ G+P+Q   L  RIR  VL L+LQMYGCRVIQKALE++S   Q+  +IVREL+G V+KCVKDQNGNHVVQKC+ECV P+ L FIIDAF+  V+ LSTH YGCRVIQRILEHCT EQT PIL ELH  +E+L +DQYGNYVIQHVLEHG+ EDKSKIV  +RG+++ LS HKFASNVVEK V H++R ER  LI+EV  Q   P                                    S LY MMKDQ+ANYV+Q+M+D+AE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMK+  +LG I    +G+
Sbjct:  816 RSRLLEDFRNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSPDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVIGDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGP-----------------------------------HSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGTELGPIGGPTNGL 1174
[Close]
BLAST of Pumilio protein vs. Ensembl Medaka
Match: pum1 (pumilio RNA binding family member 1 [Source:NCBI gene;Acc:100335141])

HSP 1 Score: 473.396 bits (1217), Expect = 4.248e-148
Identity = 235/393 (59.80%), Postives = 282/393 (71.76%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L++IAGH++EF+QDQHGSRFIQ KL+ +S  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ +Q   L +RIR  VL L+LQMYGCRVIQKALE +    Q+   +VREL+G V+KCVKDQNGNHVVQKC+ECV P  L FII+AFK  V++LSTH YGCRVIQRILEHC PEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV  +RG ++ LS HKFASNVVEK V HA+R ER  LI+EV                  ++ G +                  S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG +    +G+
Sbjct:  796 RSRLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRTERAMLIDEV----------------CGLTEGPH------------------SALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGI 1154
[Close]
BLAST of Pumilio protein vs. Ensembl Medaka
Match: pum1 (pumilio RNA binding family member 1 [Source:NCBI gene;Acc:100335141])

HSP 1 Score: 473.011 bits (1216), Expect = 8.386e-148
Identity = 235/393 (59.80%), Postives = 282/393 (71.76%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L++IAGH++EF+QDQHGSRFIQ KL+ +S  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ +Q   L +RIR  VL L+LQMYGCRVIQKALE +    Q+   +VREL+G V+KCVKDQNGNHVVQKC+ECV P  L FII+AFK  V++LSTH YGCRVIQRILEHC PEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV  +RG ++ LS HKFASNVVEK V HA+R ER  LI+EV                  ++ G +                  S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG +    +G+
Sbjct:  807 RSRLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRTERAMLIDEV----------------CGLTEGPH------------------SALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGI 1165
[Close]
BLAST of Pumilio protein vs. Ensembl Medaka
Match: pum1 (pumilio RNA binding family member 1 [Source:NCBI gene;Acc:100335141])

HSP 1 Score: 472.626 bits (1215), Expect = 2.870e-147
Identity = 235/393 (59.80%), Postives = 282/393 (71.76%), Query Frame = 1 
Query: 1723 RSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQI--NIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGM 2895
            RSRLLEDFR NR   L L++IAGH++EF+QDQHGSRFIQ KL+ +S  E+ +VF EIL   Y LM DVFGNYVIQ+FF+ G+ +Q   L +RIR  VL L+LQMYGCRVIQKALE +    Q+   +VREL+G V+KCVKDQNGNHVVQKC+ECV P  L FII+AFK  V++LSTH YGCRVIQRILEHC PEQT PIL ELH  TE+LV+DQYGNYVIQHVLEHG+ EDKSKIV  +RG ++ LS HKFASNVVEK V HA+R ER  LI+EV                  ++ G +                  S LY MMKDQ+ANYV+QKM+DVAE   RK +M KI+PH+ +LRKYTYGKHI+ K+EKYYMKN  DLG +    +G+
Sbjct:  856 RSRLLEDFRNNRYPNLQLRDIAGHIMEFSQDQHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRTERAMLIDEV----------------CGLTEGPH------------------SALYTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHISTLRKYTYGKHILAKLEKYYMKNGVDLGPLCGPPNGI 1214
[Close]
BLAST of Pumilio protein vs. Planmine SMEST
Match: SMESG000008631.1 (SMESG000008631.1)

HSP 1 Score: 958.362 bits (2476), Expect = 0.000e+0
Identity = 485/486 (99.79%), Postives = 486/486 (100.00%), Query Frame = 1 
Query: 1456 LIGQNQXXXXXXXXXMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 2913
            LIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQD+IPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM
Sbjct:   19 LIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDSIPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 504
[Close]
BLAST of Pumilio protein vs. Planmine SMEST
Match: SMESG000008631.1 (SMESG000008631.1)

HSP 1 Score: 956.436 bits (2471), Expect = 0.000e+0
Identity = 485/486 (99.79%), Postives = 486/486 (100.00%), Query Frame = 1 
Query: 1456 LIGQNQXXXXXXXXXMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 2913
            LIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQD+IPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM
Sbjct:  107 LIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDSIPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 592

HSP 2 Score: 198.364 bits (503), Expect = 1.547e-53
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 2 
Query: 1139 MIVLHLRYQHNSYMQVKMGLCTMERKHHKSKTSPLRQLYSLVLCIWQLSVVVMFLLQLSKCLHNNSHRTWYRTHCILSRVCWHTVLIPMDSNP 1417
            MIVLHLRYQHNSYMQVKMGLCTMERKHHKSKTSPLRQLYSLVLCIWQLSVVVMFLLQLSKCLHNNSHRTWYRTHCILS+VCWHTVLIPMDSNP
Sbjct:    1 MIVLHLRYQHNSYMQVKMGLCTMERKHHKSKTSPLRQLYSLVLCIWQLSVVVMFLLQLSKCLHNNSHRTWYRTHCILSQVCWHTVLIPMDSNP 93
[Close]
BLAST of Pumilio protein vs. Planmine SMEST
Match: SMESG000008631.1 (SMESG000008631.1)

HSP 1 Score: 956.436 bits (2471), Expect = 0.000e+0
Identity = 485/486 (99.79%), Postives = 486/486 (100.00%), Query Frame = 1 
Query: 1456 LIGQNQXXXXXXXXXMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 2913
            LIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQD+IPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM
Sbjct:   94 LIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDSIPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 579

HSP 2 Score: 171.785 bits (434), Expect = 1.023e-44
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 2 
Query: 1178 MQVKMGLCTMERKHHKSKTSPLRQLYSLVLCIWQLSVVVMFLLQLSKCLHNNSHRTWYRTHCILSRVCWHTVLIPMDSNP 1417
            MQVKMGLCTMERKHHKSKTSPLRQLYSLVLCIWQLSVVVMFLLQLSKCLHNNSHRTWYRTHCILS+VCWHTVLIPMDSNP
Sbjct:    1 MQVKMGLCTMERKHHKSKTSPLRQLYSLVLCIWQLSVVVMFLLQLSKCLHNNSHRTWYRTHCILSQVCWHTVLIPMDSNP 80
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BLAST of Pumilio protein vs. Planmine SMEST
Match: SMESG000008631.1 (SMESG000008631.1)

HSP 1 Score: 955.666 bits (2469), Expect = 0.000e+0
Identity = 485/486 (99.79%), Postives = 486/486 (100.00%), Query Frame = 1 
Query: 1456 LIGQNQXXXXXXXXXMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDTIPVSTSNAIMRNADVSSGVYXXXXXXXXXXXXXXVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 2913
            LIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQD+IPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM
Sbjct:   90 LIGQNQAALSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMPATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQEIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVFGNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSKVTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQHVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQALINEVLQDSIPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLYWMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINKMEKYYMKNNQDLGGILSSNSGMACVGHM 575

HSP 2 Score: 164.466 bits (415), Expect = 2.746e-42
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 2 
Query: 1190 MGLCTMERKHHKSKTSPLRQLYSLVLCIWQLSVVVMFLLQLSKCLHNNSHRTWYRTHCILSRVCWHTVLIPMDSNP 1417
            MGLCTMERKHHKSKTSPLRQLYSLVLCIWQLSVVVMFLLQLSKCLHNNSHRTWYRTHCILS+VCWHTVLIPMDSNP
Sbjct:    1 MGLCTMERKHHKSKTSPLRQLYSLVLCIWQLSVVVMFLLQLSKCLHNNSHRTWYRTHCILSQVCWHTVLIPMDSNP 76
[Close]
BLAST of Pumilio protein vs. Planmine SMEST
Match: SMESG000008630.1 (SMESG000008630.1)

HSP 1 Score: 423.32 bits (1087), Expect = 8.422e-141
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1 
Query:  130 MSDFHENTTERNPSGINPNVATCQIANSSIYNSLGQVSTVISNXXXXXXXXXXXXXXDEWSMPGLSLSNTTEQLTRQISQLSFDDHNAYWPPQLGMPMSGDNRAWDTSENSISQPIPMHHGRRDTLGNDSGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENFYSNPSSNFGYSNGNAQPFPQSPPHYYLPSSQLYQPSTLCGTPENSQVFGC 792
            MSDFHENTTERNPSGINPNVATCQIANSSIYNSLGQVSTVISNVPSGPYYSSSYVYPDEWSMPGLSLSNTTEQLTRQISQLSFDDHNAYWPPQLGMPMSGDNRAWDTSENSISQPIPMHHGRRDTLGNDSGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENFYSNPSSNFGYSNGNAQPFPQSPPHYYLPSSQLYQPSTLCGTPENSQVFGC
Sbjct:    1 MSDFHENTTERNPSGINPNVATCQIANSSIYNSLGQVSTVISNVPSGPYYSSSYVYPDEWSMPGLSLSNTTEQLTRQISQLSFDDHNAYWPPQLGMPMSGDNRAWDTSENSISQPIPMHHGRRDTLGNDSGSFMSPISKEMVALGMQVVNKVLSSSPGTGVMCRSDIMENFYSNPSSNFGYSNGNAQPFPQSPPHYYLPSSQLYQPSTLCGTPENSQVFGC 221
The following BLAST results are available for this feature:
BLAST of Pumilio protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PUM24.970e-15460.71pumilio RNA binding family member 2 [Source:HGNC S... [more]
PUM28.415e-15460.71pumilio RNA binding family member 2 [Source:HGNC S... [more]
PUM22.640e-15360.71pumilio RNA binding family member 2 [Source:HGNC S... [more]
PUM22.023e-15260.71pumilio RNA binding family member 2 [Source:HGNC S... [more]
PUM22.023e-15260.71pumilio RNA binding family member 2 [Source:HGNC S... [more]
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BLAST of Pumilio protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
puf-96.007e-11249.23PUF (Pumilio/FBF) domain-containing [Source:UniPr... [more]
puf-86.556e-9237.87PUF (Pumilio/FBF) domain-containing [Source:UniPr... [more]
puf-112.710e-3225.85PUF (Pumilio/FBF) domain-containing [Source:UniPr... [more]
puf-35.379e-3225.42PUF (Pumilio/FBF) domain-containing [Source:UniPr... [more]
fbf-22.387e-2924.51Fem-3 mRNA-binding factor 2 [Source:UniProtKB/Swi... [more]
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BLAST of Pumilio protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pum1.135e-15061.97gene:FBgn0003165 transcript:FBtr0333668[more]
pum1.136e-15061.97gene:FBgn0003165 transcript:FBtr0305197[more]
pum1.416e-15061.97gene:FBgn0003165 transcript:FBtr0081994[more]
pum1.251e-14861.97gene:FBgn0003165 transcript:FBtr0081993[more]
pum7.477e-14661.97gene:FBgn0003165 transcript:FBtr0081991[more]
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BLAST of Pumilio protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pum21.997e-14859.39pumilio RNA-binding family member 2 [Source:ZFIN;A... [more]
pum15.237e-14859.80pumilio RNA-binding family member 1 [Source:ZFIN;A... [more]
pum22.348e-14255.58pumilio RNA-binding family member 2 [Source:ZFIN;A... [more]
pum14.622e-10667.60pumilio RNA-binding family member 1 [Source:ZFIN;A... [more]
pum36.013e-721.98Danio rerio pumilio RNA-binding family member 3 (p... [more]
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BLAST of Pumilio protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
PUM22.844e-15560.46pumilio RNA binding family member 2 [Source:NCBI g... [more]
PUM26.958e-15360.46pumilio RNA binding family member 2 [Source:NCBI g... [more]
ambra19.786e-15360.61autophagy/beclin-1 regulator 1 [Source:Xenbase;Acc... [more]
PUM22.854e-15260.46pumilio RNA binding family member 2 [Source:NCBI g... [more]
PUM23.140e-15260.15pumilio RNA binding family member 2 [Source:NCBI g... [more]
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BLAST of Pumilio protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Pum26.918e-15360.46pumilio RNA-binding family member 2 [Source:MGI Sy... [more]
Pum26.918e-15360.46pumilio RNA-binding family member 2 [Source:MGI Sy... [more]
Pum28.257e-15360.46pumilio RNA-binding family member 2 [Source:MGI Sy... [more]
Pum11.785e-15260.61pumilio RNA-binding family member 1 [Source:MGI Sy... [more]
Pum11.785e-15260.61pumilio RNA-binding family member 1 [Source:MGI Sy... [more]
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BLAST of Pumilio protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|E3WDQ9|PUM2_XENLA2.410e-15160.46Pumilio homolog 2 OS=Xenopus laevis OX=8355 GN=pum... [more]
sp|Q8TB72|PUM2_HUMAN1.979e-15060.41Pumilio homolog 2 OS=Homo sapiens OX=9606 GN=PUM2 ... [more]
sp|Q80U58|PUM2_MOUSE3.868e-15060.15Pumilio homolog 2 OS=Mus musculus OX=10090 GN=Pum2... [more]
sp|Q14671|PUM1_HUMAN4.491e-14960.61Pumilio homolog 1 OS=Homo sapiens OX=9606 GN=PUM1 ... [more]
sp|Q5R5X3|PUM1_PONAB6.740e-14960.61Pumilio homolog 1 OS=Pongo abelii OX=9601 GN=PUM1 ... [more]
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BLAST of Pumilio protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A172RVP50.000e+0100.00Pumilio protein (Fragment) OS=Schmidtea mediterran... [more]
Q564I90.000e+092.89Pumilio homolog OS=Dugesia japonica OX=6161 GN=pum... [more]
V5KXM50.000e+074.06PUM protein OS=Polycelis yangchengensis (nomen nud... [more]
A0A1W6I1A25.915e-1498.10Pumilio PUf family-like protein (Fragment) OS=Schm... [more]
A0A504YDE75.523e-672.89Maternal protein pumilio OS=Fasciola gigantica OX=... [more]
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BLAST of Pumilio protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
pum12.686e-14960.31pumilio RNA-binding family member 1 [Source:ZFIN;A... [more]
pum18.761e-12860.23pumilio RNA-binding family member 1 [Source:ZFIN;A... [more]
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BLAST of Pumilio protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
pum21.324e-15254.59pumilio RNA-binding family member 2 [Source:ZFIN;A... [more]
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BLAST of Pumilio protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 4
Match NameE-valueIdentityDescription
PUF31.594e-8341.89Protein of the mitochondrial outer surface; links ... [more]
PUF41.005e-4931.65Member of the PUF protein family; PUF family is de... [more]
MPT51.037e-4432.62mRNA-binding protein of the PUF family; binds to s... [more]
PUF21.852e-724.62PUF family mRNA-binding protein; Pumilio homology ... [more]
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BLAST of Pumilio protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO428077.595e-15161.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Pumilio protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
pum24.616e-15159.69pumilio RNA binding family member 2 [Source:NCBI g... [more]
pum22.991e-14859.39pumilio RNA binding family member 2 [Source:NCBI g... [more]
pum14.248e-14859.80pumilio RNA binding family member 1 [Source:NCBI g... [more]
pum18.386e-14859.80pumilio RNA binding family member 1 [Source:NCBI g... [more]
pum12.870e-14759.80pumilio RNA binding family member 1 [Source:NCBI g... [more]
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BLAST of Pumilio protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000008631.10.000e+099.79SMESG000008631.1[more]
SMESG000008631.11.547e-5399.79SMESG000008631.1[more]
SMESG000008631.11.023e-4499.79SMESG000008631.1[more]
SMESG000008631.12.746e-4299.79SMESG000008631.1[more]
SMESG000008630.18.422e-141100.00SMESG000008630.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30031704 ID=SMED30031704|Name=Pumilio protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3231bp
CTAAAGTAATATGGCATTTTGTTTTTAATAAAGCGGCTCTTATTAGAATA
TACCTTTTTGTACTGTGTACATAGTGTACATAAGGGAAAAAATTGTATAT
ACTCGTTCATTGTCATAAAATAAAGACAAATGTCAGATTTTCATGAAAAT
ACAACTGAAAGAAATCCATCTGGAATAAATCCAAACGTAGCAACTTGTCA
AATTGCAAATTCATCAATCTATAATTCCCTTGGTCAAGTATCAACTGTTA
TTTCTAATGTTCCTAGTGGGCCTTACTATTCATCAAGTTATGTTTATCCA
GACGAATGGTCAATGCCAGGGTTATCATTATCAAACACAACTGAACAATT
GACAAGACAAATTTCTCAACTGAGTTTTGATGATCACAATGCTTACTGGC
CACCTCAACTTGGTATGCCAATGTCTGGTGACAATCGAGCTTGGGATACA
TCTGAGAATAGTATTTCACAACCTATTCCTATGCACCATGGAAGGCGAGA
TACGTTAGGAAATGACAGTGGCTCTTTTATGTCACCAATATCAAAAGAGA
TGGTTGCATTAGGAATGCAAGTTGTAAATAAAGTTTTAAGTTCTTCTCCG
GGAACAGGAGTGATGTGTAGATCAGACATAATGGAAAATTTCTACAGCAA
TCCATCAAGCAATTTCGGTTATTCCAATGGAAATGCTCAACCATTTCCAC
AGTCTCCACCTCATTATTATTTGCCTTCTAGCCAGCTTTACCAACCTTCA
ACGTTGTGTGGCACACCTGAAAATTCCCAGGTTTTCGGTTGCAACAATCA
ACAGAATCAACAATCGATTTCACAACAGCCTCAACAACAGAGCAGTGCCA
ATCAACAGTTTTTTGATCCAGCTATAATTGCAGCTTCTTTTTCGAATGCT
GGTCAAGGTTATCCACCTCAACAACAGGCTCCACAGGGATTACCACCCCC
TCCTGGATTGGCTCCATCTCACAGTGATTACATGACCGGTGAACCCACCA
GTCCCTTGCACAGCAAACAGCCCGATGAAGAGCAAAATCAATACATCTGG
TCTCCTGGCGCAAACAACGGCATGGTGCACGATTATATGAGTGGCAACAC
AGCTCCCACATACGGATACCACCAACAAGCTCCCATCTATGATCGTCCTA
CATCTGCGTTACCAACACAACAGTTATATGCAAGTCAAAATGGGGCTCTG
CACCATGGAACGCAAACATCACAAATCCAAAACCAGTCCGCTGCGGCAGC
TTTATTCGCTCGTTCTCTGTATTTGGCAGCTCTCGGTAGTGGTCATGTTC
CTCCTGCAACTCAGCAAATGCCTCCACAACAACAGCCACCGAACTTGGTA
CCGGACGCATTGCATACTCTCACGAGTATGCTGGCACACAGTTCTAATTC
CTATGGACAGCAACCCCAACAGCAGCCTCCGAATTTCCCGAGCAGTCAAA
ACAATTTAATCGGGCAAAACCAGGCTGCATTATCGGCATTATCGGCTGCA
ATGACGGGTTATTTTCTTTCACCACAAATTGGCACTCACGCTCCTCCTCC
GACCCAGCAGTTCTCAGTGATGCCCGGCAGTAATCCGACTATGCTCGGTG
CACCACAACCCAGTCACGCTCTGATGCCAGCAACCGGCTCACAAATGATT
ACACATCAAGGTAGTAAACCTATGCAACCCGGGTACAAAGGAGTAGTTGG
TAATCTTAAAGATGGAGTCACAAGAAGTCGATTATTGGAGGATTTCAGAG
CTAATAGATTAACAACACTTACACTTCAAGAAATTGCTGGCCATGTTGTA
GAATTTGCTCAAGACCAACATGGGTCTAGATTTATCCAACAAAAACTTCA
AGAATCTAGTCATAATGAAAAAACAATGGTGTTTCGAGAAATACTTCCCC
ATTGTTACAATCTTATGACTGATGTATTTGGAAATTATGTCATTCAAAGG
TTTTTCGATCTTGGAACACCTGAACAGATTCAGATTCTTGGTGATAGAAT
TCGTAATCAAGTTCTTCAATTGTCTCTACAAATGTATGGCTGTCGTGTAA
TACAGAAAGCTTTAGAAACTGTTAGTAAAGTTACACAAATAAATATTGTA
CGCGAATTAGAGGGTTCGGTAATTAAATGTGTAAAAGATCAAAACGGCAA
TCATGTTGTGCAAAAGTGTGTCGAATGCGTTCCTCCAGAACATCTCGACT
TTATAATTGATGCTTTCAAAGACAATGTCTATTCCCTTTCTACTCATTCG
TACGGTTGTAGAGTTATACAACGGATTTTAGAACATTGTACTCCAGAACA
AACAGCTCCTATACTAGCTGAATTACATCATTTCACAGAGGAATTGGTAA
AGGATCAATATGGAAATTACGTTATTCAACATGTTTTAGAACATGGAAAA
ACAGAAGACAAAAGTAAAATTGTGACTTTGCTTAGAGGCAGGATTGTCGA
ACTCAGTATCCATAAATTCGCTAGTAATGTTGTTGAAAAAGCTGTGGCAC
ATGCAACTCGTCAAGAGCGCCAAGCCCTAATAAATGAAGTTCTCCAAGAT
ACTATTCCTGTTTCTACAAGCAATGCAATAATGCGCAATGCCGATGTCAG
TAGTGGTGTGTATGGATCTGAAACCGATGGTAGTGATACCGACGGCGGAG
GATCTGTACAAAGGGAATCTGTTCTTTATTGGATGATGAAAGACCAATTC
GCTAATTATGTCATTCAAAAAATGCTCGATGTAGCTGAACAGCCAATGAG
AAAAGAATTAATGACTAAAATCAAGCCCCATCTTGGAAGCCTAAGAAAAT
ACACGTACGGCAAGCATATAATAAACAAAATGGAAAAGTATTACATGAAA
AACAATCAGGATCTTGGTGGTATTCTGAGCAGTAATTCTGGAATGGCTTG
TGTTGGTCATATGTGAAAATTGGTTGATATATTATGATGATATGATGATG
AAGATGATGTTGTTGAGGATGATTTCATTTGTATTTGTGCGTATTTCGAT
TTTCATATTTATCGTGTAATAATATTACAAAATCAATCATTTTATAGCAT
GGCGTTATTATACATAAATGTGTAAAATATATATAATTATATACATATAT
ATATATATACATATAATGTATATTATAATAATTTTTTTTAATTGGTTTTG
CATCTCTCGACTTGCTTCAATTATACTTTGTTACTTTGTTTAGGATTTAC
TTATATTATTATTATAATTATCATTATTATT
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protein sequence of SMED30031704-orf-1

>SMED30031704-orf-1 ID=SMED30031704-orf-1|Name=SMED30031704-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=929bp
MSDFHENTTERNPSGINPNVATCQIANSSIYNSLGQVSTVISNVPSGPYY
SSSYVYPDEWSMPGLSLSNTTEQLTRQISQLSFDDHNAYWPPQLGMPMSG
DNRAWDTSENSISQPIPMHHGRRDTLGNDSGSFMSPISKEMVALGMQVVN
KVLSSSPGTGVMCRSDIMENFYSNPSSNFGYSNGNAQPFPQSPPHYYLPS
SQLYQPSTLCGTPENSQVFGCNNQQNQQSISQQPQQQSSANQQFFDPAII
AASFSNAGQGYPPQQQAPQGLPPPPGLAPSHSDYMTGEPTSPLHSKQPDE
EQNQYIWSPGANNGMVHDYMSGNTAPTYGYHQQAPIYDRPTSALPTQQLY
ASQNGALHHGTQTSQIQNQSAAAALFARSLYLAALGSGHVPPATQQMPPQ
QQPPNLVPDALHTLTSMLAHSSNSYGQQPQQQPPNFPSSQNNLIGQNQAA
LSALSAAMTGYFLSPQIGTHAPPPTQQFSVMPGSNPTMLGAPQPSHALMP
ATGSQMITHQGSKPMQPGYKGVVGNLKDGVTRSRLLEDFRANRLTTLTLQ
EIAGHVVEFAQDQHGSRFIQQKLQESSHNEKTMVFREILPHCYNLMTDVF
GNYVIQRFFDLGTPEQIQILGDRIRNQVLQLSLQMYGCRVIQKALETVSK
VTQINIVRELEGSVIKCVKDQNGNHVVQKCVECVPPEHLDFIIDAFKDNV
YSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTEELVKDQYGNYVIQ
HVLEHGKTEDKSKIVTLLRGRIVELSIHKFASNVVEKAVAHATRQERQAL
INEVLQDTIPVSTSNAIMRNADVSSGVYGSETDGSDTDGGGSVQRESVLY
WMMKDQFANYVIQKMLDVAEQPMRKELMTKIKPHLGSLRKYTYGKHIINK
MEKYYMKNNQDLGGILSSNSGMACVGHM*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000034epidermis
PLANA:0000103central nervous system
PLANA:0000208testis
PLANA:0000228male germ cell
PLANA:0002109X1 cell
PLANA:0003117parapharyngeal cell
Vocabulary: INTERPRO
TermDefinition
IPR013809ENTH
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR016024ARM-type_fold
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0005488binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 38..57