GL25839

Overview
NameGL25839
Smed IDSMED30031634
Length (bp)547
Neoblast Clusters

Zeng et. al., 2018



 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30031634

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30031634SMESG000020707.1 dd_Smed_v4_91547_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30031634SMESG000020707.1 dd_Smed_v4_91547_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30031634SMESG000020707.1 dd_Smed_v4_91547_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30031634SMESG000020707.1 dd_Smed_v4_82108_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30031634SMESG000020707.1 dd_Smed_v4_82108_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30031634SMESG000020707.1 dd_Smed_v4_82108_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of GL25839 vs. Ensembl Human
Match: ANKRD6 (ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HGNC:17280])

HSP 1 Score: 49.6766 bits (117), Expect = 8.397e-7
Identity = 39/130 (30.00%), Postives = 62/130 (47.69%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  K K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + ++ +L      H           KN  G+TA+H AA L         +  ++ KILLE G D  IV  +
Sbjct:  129 KAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVAKILLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. Ensembl Human
Match: ANKRD6 (ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HGNC:17280])

HSP 1 Score: 49.6766 bits (117), Expect = 9.296e-7
Identity = 39/130 (30.00%), Postives = 62/130 (47.69%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  K K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + ++ +L      H           KN  G+TA+H AA L         +  ++ KILLE G D  IV  +
Sbjct:  129 KAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVAKILLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. Ensembl Human
Match: ANKRD6 (ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HGNC:17280])

HSP 1 Score: 49.6766 bits (117), Expect = 9.307e-7
Identity = 39/130 (30.00%), Postives = 62/130 (47.69%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  K K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + ++ +L      H           KN  G+TA+H AA L         +  ++ KILLE G D  IV  +
Sbjct:  129 KAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVAKILLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. Ensembl Human
Match: ANKRD6 (ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HGNC:17280])

HSP 1 Score: 49.6766 bits (117), Expect = 9.307e-7
Identity = 39/130 (30.00%), Postives = 62/130 (47.69%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  K K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + ++ +L      H           KN  G+TA+H AA L         +  ++ KILLE G D  IV  +
Sbjct:  129 KAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVAKILLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. Ensembl Human
Match: ANKRD6 (ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HGNC:17280])

HSP 1 Score: 48.9062 bits (115), Expect = 1.052e-6
Identity = 42/136 (30.88%), Postives = 65/136 (47.79%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFL 409
            K+GANV  K K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + ++ +L      H           KN  G+TA+H AA L   K         + KILLE G D  IV  + G++ L
Sbjct:  129 KAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHE----------KNQAGDTALHVAAALNHKK---------VAKILLEAGADTTIVNNA-GQTPL 244
[Close]
BLAST of GL25839 vs. Ensembl Celegans
Match: trp-4 (TRP (Transient receptor potential) channel family [Source:UniProtKB/TrEMBL;Acc:Q9GRV5])

HSP 1 Score: 56.225 bits (134), Expect = 2.426e-9
Identity = 44/136 (32.35%), Postives = 76/136 (55.88%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFL 409
            KSG   +     GET LHI +R GN DI++LLLDE AD       G + L  A K  +F     IL+ L+   +  + K  +N + N+G TA+H+AA++ Q +      +A+++ +L++ GG +++ + +  E+ +
Sbjct:  717 KSGGQPDVAQMDGETCLHIAARSGNKDIMRLLLDENADSKISSKIGETPLQVAAKSCNFEAASMILKHLSEVLTQEQLKEHVNHRTNDGFTALHYAAEIEQRQLHFPGEDAKLVNLLIDYGGMVEMPSLNANETAM 852
[Close]
BLAST of GL25839 vs. Ensembl Fly
Match: nompC (gene:FBgn0016920 transcript:FBtr0347408)

HSP 1 Score: 76.2554 bits (186), Expect = 3.728e-16
Identity = 46/134 (34.33%), Postives = 77/134 (57.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGES 403
            KSGA+ N       T +H+ +R GNL  L  LL+++ DP  + N G + LH A +  H   V+ ++E +   H   KA   IN  N +G TA+H+  ++ + + ++  S+ QI+++LLENG D+ + TK+  E+
Sbjct:  490 KSGASPNLTTDDCLTPVHVAARHGNLATLMQLLEDEGDPLYKSNTGETPLHMACRACHPDIVRHLIETVKEKHGPDKATTYINSVNEDGATALHYTCQITKEEVKIPESDKQIVRMLLENGADVTLQTKTALET 623
[Close]
BLAST of GL25839 vs. Ensembl Fly
Match: nompC (gene:FBgn0016920 transcript:FBtr0300012)

HSP 1 Score: 75.8702 bits (185), Expect = 4.020e-16
Identity = 46/134 (34.33%), Postives = 77/134 (57.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGES 403
            KSGA+ N       T +H+ +R GNL  L  LL+++ DP  + N G + LH A +  H   V+ ++E +   H   KA   IN  N +G TA+H+  ++ + + ++  S+ QI+++LLENG D+ + TK+  E+
Sbjct:  490 KSGASPNLTTDDCLTPVHVAARHGNLATLMQLLEDEGDPLYKSNTGETPLHMACRACHPDIVRHLIETVKEKHGPDKATTYINSVNEDGATALHYTCQITKEEVKIPESDKQIVRMLLENGADVTLQTKTALET 623
[Close]
BLAST of GL25839 vs. Ensembl Fly
Match: nompC (gene:FBgn0016920 transcript:FBtr0347409)

HSP 1 Score: 75.8702 bits (185), Expect = 4.026e-16
Identity = 46/134 (34.33%), Postives = 77/134 (57.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGES 403
            KSGA+ N       T +H+ +R GNL  L  LL+++ DP  + N G + LH A +  H   V+ ++E +   H   KA   IN  N +G TA+H+  ++ + + ++  S+ QI+++LLENG D+ + TK+  E+
Sbjct:  490 KSGASPNLTTDDCLTPVHVAARHGNLATLMQLLEDEGDPLYKSNTGETPLHMACRACHPDIVRHLIETVKEKHGPDKATTYINSVNEDGATALHYTCQITKEEVKIPESDKQIVRMLLENGADVTLQTKTALET 623
[Close]
BLAST of GL25839 vs. Ensembl Fly
Match: nompC (gene:FBgn0016920 transcript:FBtr0343224)

HSP 1 Score: 75.8702 bits (185), Expect = 4.179e-16
Identity = 46/134 (34.33%), Postives = 77/134 (57.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGES 403
            KSGA+ N       T +H+ +R GNL  L  LL+++ DP  + N G + LH A +  H   V+ ++E +   H   KA   IN  N +G TA+H+  ++ + + ++  S+ QI+++LLENG D+ + TK+  E+
Sbjct:  490 KSGASPNLTTDDCLTPVHVAARHGNLATLMQLLEDEGDPLYKSNTGETPLHMACRACHPDIVRHLIETVKEKHGPDKATTYINSVNEDGATALHYTCQITKEEVKIPESDKQIVRMLLENGADVTLQTKTALET 623
[Close]
BLAST of GL25839 vs. Ensembl Fly
Match: nompC (gene:FBgn0016920 transcript:FBtr0304843)

HSP 1 Score: 75.8702 bits (185), Expect = 4.342e-16
Identity = 46/134 (34.33%), Postives = 77/134 (57.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGES 403
            KSGA+ N       T +H+ +R GNL  L  LL+++ DP  + N G + LH A +  H   V+ ++E +   H   KA   IN  N +G TA+H+  ++ + + ++  S+ QI+++LLENG D+ + TK+  E+
Sbjct:  490 KSGASPNLTTDDCLTPVHVAARHGNLATLMQLLEDEGDPLYKSNTGETPLHMACRACHPDIVRHLIETVKEKHGPDKATTYINSVNEDGATALHYTCQITKEEVKIPESDKQIVRMLLENGADVTLQTKTALET 623
[Close]
BLAST of GL25839 vs. Ensembl Zebrafish
Match: ankrd6b (ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4])

HSP 1 Score: 46.595 bits (109), Expect = 6.649e-6
Identity = 39/136 (28.68%), Postives = 72/136 (52.94%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFL 409
            K+GANV+ K K+G T LH+  + G++   ++LL   + P S+ + G++ LH + ++ H + ++ +L  +            +  +N+ G+TA+H AA L   K          +++LLE G D +I   + GE+ L
Sbjct:  131 KAGANVHAKNKAGNTALHLACQNGHVQSCRVLLLGGSRPDSKNSVGDTCLHVSARYNHVSVIRALLGAICS----------VTDRNHTGDTALHIAATLNHRKT---------VRMLLEAGADSRI-KNNTGETAL 246
[Close]
BLAST of GL25839 vs. Ensembl Zebrafish
Match: ankrd6b (ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4])

HSP 1 Score: 46.2098 bits (108), Expect = 7.305e-6
Identity = 39/136 (28.68%), Postives = 72/136 (52.94%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFL 409
            K+GANV+ K K+G T LH+  + G++   ++LL   + P S+ + G++ LH + ++ H + ++ +L  +            +  +N+ G+TA+H AA L   K          +++LLE G D +I   + GE+ L
Sbjct:  131 KAGANVHAKNKAGNTALHLACQNGHVQSCRVLLLGGSRPDSKNSVGDTCLHVSARYNHVSVIRALLGAICS----------VTDRNHTGDTALHIAATLNHRKT---------VRMLLEAGADSRI-KNNTGETAL 246
[Close]
BLAST of GL25839 vs. Ensembl Mouse
Match: Ankrd6 (ankyrin repeat domain 6 [Source:MGI Symbol;Acc:MGI:2154278])

HSP 1 Score: 50.0618 bits (118), Expect = 4.798e-7
Identity = 38/130 (29.23%), Postives = 63/130 (48.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  + K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + V+ +L      H           KN  G+TA+H AA L         +  +++K+LLE G D  IV  +
Sbjct:  129 KAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRADLKNNAGDTCLHVAARYNHLSVVRLLLNAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVVKVLLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. Ensembl Mouse
Match: Ankrd6 (ankyrin repeat domain 6 [Source:MGI Symbol;Acc:MGI:2154278])

HSP 1 Score: 50.0618 bits (118), Expect = 4.798e-7
Identity = 38/130 (29.23%), Postives = 63/130 (48.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  + K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + V+ +L      H           KN  G+TA+H AA L         +  +++K+LLE G D  IV  +
Sbjct:  129 KAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRADLKNNAGDTCLHVAARYNHLSVVRLLLNAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVVKVLLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. Ensembl Mouse
Match: Ankrd6 (ankyrin repeat domain 6 [Source:MGI Symbol;Acc:MGI:2154278])

HSP 1 Score: 50.0618 bits (118), Expect = 4.798e-7
Identity = 38/130 (29.23%), Postives = 63/130 (48.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  + K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + V+ +L      H           KN  G+TA+H AA L         +  +++K+LLE G D  IV  +
Sbjct:  129 KAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRADLKNNAGDTCLHVAARYNHLSVVRLLLNAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVVKVLLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. Ensembl Mouse
Match: Ankrd6 (ankyrin repeat domain 6 [Source:MGI Symbol;Acc:MGI:2154278])

HSP 1 Score: 49.6766 bits (117), Expect = 5.079e-7
Identity = 38/130 (29.23%), Postives = 63/130 (48.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  + K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + V+ +L      H           KN  G+TA+H AA L         +  +++K+LLE G D  IV  +
Sbjct:  129 KAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRADLKNNAGDTCLHVAARYNHLSVVRLLLNAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVVKVLLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. UniProt/SwissProt
Match: sp|Q69ZU8|ANKR6_MOUSE (Ankyrin repeat domain-containing protein 6 OS=Mus musculus OX=10090 GN=Ankrd6 PE=1 SV=2)

HSP 1 Score: 50.0618 bits (118), Expect = 3.356e-6
Identity = 38/130 (29.23%), Postives = 63/130 (48.46%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  + K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + V+ +L      H           KN  G+TA+H AA L         +  +++K+LLE G D  IV  +
Sbjct:  129 KAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRADLKNNAGDTCLHVAARYNHLSVVRLLLNAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVVKVLLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. UniProt/SwissProt
Match: sp|Q9Y2G4|ANKR6_HUMAN (Ankyrin repeat domain-containing protein 6 OS=Homo sapiens OX=9606 GN=ANKRD6 PE=2 SV=3)

HSP 1 Score: 49.6766 bits (117), Expect = 4.469e-6
Identity = 39/130 (30.00%), Postives = 62/130 (47.69%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKS 391
            K+GANV  K K+G T LH+  +  +    ++LL   +    + N G++ LH A ++ H + ++ +L      H           KN  G+TA+H AA L         +  ++ KILLE G D  IV  +
Sbjct:  129 KAGANVLAKNKAGNTALHLACQNSHSQSTRVLLLAGSRADLKNNAGDTCLHVAARYNHLSIIRLLLTAFCSVHE----------KNQAGDTALHVAAAL---------NHKKVAKILLEAGADTTIVNNA 239
[Close]
BLAST of GL25839 vs. UniProt/SwissProt
Match: sp|Q9HFE7|YNW5_SCHPO (Ankyrin repeat-containing protein P16F5.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBP16F5.05c PE=4 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 4.981e-6
Identity = 32/81 (39.51%), Postives = 44/81 (54.32%), Query Frame = 2 
Query:  137 GNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKI 379
            GNS LH A  + H A V++I+ +L         K +IN +N  G TA+H+AA        L+   A+I K+LLE GGD  I
Sbjct:   36 GNSGLHMASANGHIAVVQKIIPYLN--------KEVINAQNESGNTAMHWAA--------LN-GHAEICKLLLEAGGDPHI 99
[Close]
BLAST of GL25839 vs. TrEMBL
Match: A0A1I8FYB3 (ANK_REP_REGION domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.107e-21
Identity = 58/138 (42.03%), Postives = 84/138 (60.87%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLF 415
            KSGA+VN   + G+T LH  ++ GNL++L+ LLDE  DP   C +GNS LH A +H   A    I+E +T+  S   A NL+NL N EGETA+H+AA+L + K      +  ++K+LL   GD+ + TK   E+ L +
Sbjct:    4 KSGADVNRTNRLGQTPLHTAAKGGNLNMLRALLDEGGDPTRVCQQGNSPLHMAARHCRQAVAAAIIEHVTQTKSRHDAVNLVNLGNKEGETALHYAAELTKEKARTDFEDTDLVKLLLRYEGDVSVQTKYTNETPLHY 141
[Close]
BLAST of GL25839 vs. TrEMBL
Match: A0A1I8GYH2 (ANK_REP_REGION domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.412e-20
Identity = 58/138 (42.03%), Postives = 84/138 (60.87%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLF 415
            KSGA+VN   + G+T LH  ++ GNL++L+ LLDE  DP   C +GNS LH A +H   A    I+E +T+  S   A NL+NL N EGETA+H+AA+L + K      +  ++K+LL   GD+ + TK   E+ L +
Sbjct:  119 KSGADVNRTNRLGQTPLHTAAKGGNLNMLRALLDEGGDPTRVCQQGNSPLHMAARHCRQAVAAAIIEHVTQTKSRHDAVNLVNLGNKEGETALHYAAELTKEKARTDFEDTDLVKLLLRYEGDVSVQTKYTNETPLHY 256
[Close]
BLAST of GL25839 vs. TrEMBL
Match: K1QCS6 (Ankyrin-1 OS=Crassostrea gigas OX=29159 GN=CGI_10026812 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.786e-20
Identity = 56/138 (40.58%), Postives = 82/138 (59.42%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLF 415
            K GA+VN   ++GET +HI +R G L +L+ L++E  DP  Q   G + LH AV+H H A  KE+L +++   S   A  L+N +N EGET VH+AA+LV+        +  IM++LL+  GD  I TK   E+ L +
Sbjct:  451 KGGADVNAVRENGETAMHIAARNGQLKMLQALMEEGGDPTQQSKNGETPLHVAVRHCHLAVAKELLTYVSMTSSRIDAVMLVNQQNWEGETPVHYAAELVKSMTHFEFEDTDIMRLLLQYDGDKNIQTKLTHETSLHY 588
[Close]
BLAST of GL25839 vs. TrEMBL
Match: A0A267FPR4 (ANK_REP_REGION domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig014653g1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.012e-19
Identity = 58/138 (42.03%), Postives = 84/138 (60.87%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLF 415
            KSGA+VN   + G+T LH  ++ GNL++L+ LLDE  DP   C +GNS LH A +H   A    I+E +T+  S   A NL+NL N EGETA+H+AA+L + K      +  ++K+LL   GD+ + TK   E+ L +
Sbjct:  577 KSGADVNRTNRLGQTPLHTAAKGGNLNMLRALLDEGGDPTRVCQQGNSPLHMAARHCRQAVAAAIIEHVTQTKSRHDAVNLVNLGNKEGETALHYAAELTKEKARTDFEDTDLVKLLLRYEGDVSVQTKYTNETPLHY 714
[Close]
BLAST of GL25839 vs. TrEMBL
Match: A0A267DZS7 (ANK_REP_REGION domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig025367g1 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.104e-19
Identity = 58/138 (42.03%), Postives = 84/138 (60.87%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLF 415
            KSGA+VN   + G+T LH  ++ GNL++L+ LLDE  DP   C +GNS LH A +H   A    I+E +T+  S   A NL+NL N EGETA+H+AA+L + K      +  ++K+LL   GD+ + TK   E+ L +
Sbjct:  577 KSGADVNRTNRLGQTPLHTAAKGGNLNMLRALLDEGGDPTRVCQQGNSPLHMAARHCRQAVAAAIIEHVTQTKSRHDAVNLVNLGNKEGETALHYAAELTKEKARTDFEDTDLVKLLLRYEGDVSVQTKYTNETPLHY 714
[Close]
BLAST of GL25839 vs. Ensembl Cavefish
Match: ENSAMXT00000016978.2 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Source:NCBI gene;Acc:103025232])

HSP 1 Score: 61.2326 bits (147), Expect = 4.875e-11
Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLF 415
            KSGA VN + ++GET +H+ +R G L +++ L +E AD   +   G + LH AV H H   V+ IL  L+   S  +A+  +  +N  GETA+H AA+L          +  I++ L+E   D+   T+ +GE+ L +
Sbjct:  410 KSGAEVNAEQENGETAMHVAARYGALQMMRALTEEGADLTWRSKVGETPLHVAVHHCHAHMVEAILNSLSSERSREEAELCVRQENQSGETALHLAAELKNETVHRDEEDVVIIRTLMEYNADITAATRQMGETPLHY 547
[Close]
BLAST of GL25839 vs. Ensembl Cavefish
Match: ENSAMXT00000048767.1 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Source:NCBI gene;Acc:103025232])

HSP 1 Score: 61.2326 bits (147), Expect = 5.210e-11
Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLF 415
            KSGA VN + ++GET +H+ +R G L +++ L +E AD   +   G + LH AV H H   V+ IL  L+   S  +A+  +  +N  GETA+H AA+L          +  I++ L+E   D+   T+ +GE+ L +
Sbjct:  410 KSGAEVNAEQENGETAMHVAARYGALQMMRALTEEGADLTWRSKVGETPLHVAVHHCHAHMVEAILNSLSSERSREEAELCVRQENQSGETALHLAAELKNETVHRDEEDVVIIRTLMEYNADITAATRQMGETPLHY 547
[Close]
BLAST of GL25839 vs. Ensembl Medaka
Match: ankrd27 (ankyrin repeat domain 27 [Source:NCBI gene;Acc:101165459])

HSP 1 Score: 49.6766 bits (117), Expect = 4.683e-7
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:    8 GANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLFLNFQLI 433
            GA VN       T LH+  + G+  +  LLL  KA+  +Q N GN+ALH A  + H  CVK ++ +  +          ++L+N++G+TA+H AA+              I+ +LLENG +  I+ K+        LN +++
Sbjct:  556 GAQVNATDYHALTPLHLACQRGHQGVSLLLLHYKANADAQDNSGNTALHLACMYGHEDCVKALVYYDVQTCH-------LDLQNDKGDTALHLAARW---------GYEGIILVLLENGANTHILNKNKESPLQCALNSKVL 681
[Close]
BLAST of GL25839 vs. Ensembl Medaka
Match: ankrd27 (ankyrin repeat domain 27 [Source:NCBI gene;Acc:101165459])

HSP 1 Score: 49.6766 bits (117), Expect = 4.861e-7
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:    8 GANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLFLNFQLI 433
            GA VN       T LH+  + G+  +  LLL  KA+  +Q N GN+ALH A  + H  CVK ++ +  +          ++L+N++G+TA+H AA+              I+ +LLENG +  I+ K+        LN +++
Sbjct:  497 GAQVNATDYHALTPLHLACQRGHQGVSLLLLHYKANADAQDNSGNTALHLACMYGHEDCVKALVYYDVQTCH-------LDLQNDKGDTALHLAARW---------GYEGIILVLLENGANTHILNKNKESPLQCALNSKVL 622
[Close]
BLAST of GL25839 vs. Ensembl Medaka
Match: ankrd27 (ankyrin repeat domain 27 [Source:NCBI gene;Acc:101165459])

HSP 1 Score: 49.6766 bits (117), Expect = 4.932e-7
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:    8 GANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLFLNFQLI 433
            GA VN       T LH+  + G+  +  LLL  KA+  +Q N GN+ALH A  + H  CVK ++ +  +          ++L+N++G+TA+H AA+              I+ +LLENG +  I+ K+        LN +++
Sbjct:  497 GAQVNATDYHALTPLHLACQRGHQGVSLLLLHYKANADAQDNSGNTALHLACMYGHEDCVKALVYYDVQTCH-------LDLQNDKGDTALHLAARW---------GYEGIILVLLENGANTHILNKNKESPLQCALNSKVL 622
[Close]
BLAST of GL25839 vs. Planmine SMEST
Match: SMESG000020707.1 (SMESG000020707.1)

HSP 1 Score: 152.91 bits (385), Expect = 3.989e-43
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNN 262
            KSGANVNDKIK+GETVLHILSRLGNLDILKLLLDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNN
Sbjct:  533 KSGANVNDKIKTGETVLHILSRLGNLDILKLLLDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNN 619
[Close]
BLAST of GL25839 vs. Planmine SMEST
Match: SMESG000020706.1 (SMESG000020706.1)

HSP 1 Score: 120.553 bits (301), Expect = 1.027e-31
Identity = 70/138 (50.72%), Postives = 94/138 (68.12%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLF 415
            KSGANVN+ +K+GE+ LHI SR GNL++LK LL E ADP   C +GNS LH  V++ H+  V+E++ F  +  S   A  L+NL NNEGETAVHFAA+LVQ ++     +  I+K+LLE  GD+KI TK   E+ L +
Sbjct:  654 KSGANVNETMKNGESALHIASRSGNLEMLKSLLQEGADPSIICKDGNSPLHIGVRYCHYLIVQELVSFYNKTKSRIDAMMLVNLPNNEGETAVHFAAELVQKRKHSDFEDTDIIKMLLEYDGDVKIQTKYTEETPLHY 791
[Close]
BLAST of GL25839 vs. Planmine SMEST
Match: SMESG000020706.1 (SMESG000020706.1)

HSP 1 Score: 120.553 bits (301), Expect = 1.069e-31
Identity = 70/136 (51.47%), Postives = 93/136 (68.38%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFL 409
            KSGANVN+ +K+GE+ LHI SR GNL++LK LL E ADP   C +GNS LH  V++ H+  V+E++ F  +  S   A  L+NL NNEGETAVHFAA+LVQ ++     +  I+K+LLE  GD+KI TK   E+ L
Sbjct:  654 KSGANVNETMKNGESALHIASRSGNLEMLKSLLQEGADPSIICKDGNSPLHIGVRYCHYLIVQELVSFYNKTKSRIDAMMLVNLPNNEGETAVHFAAELVQKRKHSDFEDTDIIKMLLEYDGDVKIQTKYTEETPL 789
[Close]
BLAST of GL25839 vs. Planmine SMEST
Match: SMESG000020706.1 (SMESG000020706.1)

HSP 1 Score: 120.168 bits (300), Expect = 1.341e-31
Identity = 70/138 (50.72%), Postives = 94/138 (68.12%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLF 415
            KSGANVN+ +K+GE+ LHI SR GNL++LK LL E ADP   C +GNS LH  V++ H+  V+E++ F  +  S   A  L+NL NNEGETAVHFAA+LVQ ++     +  I+K+LLE  GD+KI TK   E+ L +
Sbjct:  654 KSGANVNETMKNGESALHIASRSGNLEMLKSLLQEGADPSIICKDGNSPLHIGVRYCHYLIVQELVSFYNKTKSRIDAMMLVNLPNNEGETAVHFAAELVQKRKHSDFEDTDIIKMLLEYDGDVKIQTKYTEETPLHY 791
[Close]
BLAST of GL25839 vs. Planmine SMEST
Match: SMESG000020705.1 (SMESG000020705.1)

HSP 1 Score: 118.627 bits (296), Expect = 4.820e-31
Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 2 
Query:    2 KSGANVNDKIKSGETVLHILSRXXXXXXXXXXXDEKADPFSQCNEGNSALHSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLVQMKQELSISEAQIMKILLENGGDMKIVTKSV 394
            KSGANVND +K GET LHI  R GNL++LK LL EKADP    NEGNS+LH  V++ H+  V EI+ FL R  +   +  L+NL NNEGETA+HFAA++V+ +      +  IMK+LLE  GDMK  TK V
Sbjct:  633 KSGANVNDTMKKGETALHIAGRTGNLEMLKSLLLEKADPTLVSNEGNSSLHIGVRYCHYPIVLEIINFLNRTKTKMDSTLLVNLPNNEGETALHFAAEIVKKRIHSDFEDIDIMKLLLEYNGDMKFQTKYV 763
The following BLAST results are available for this feature:
BLAST of GL25839 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ANKRD68.397e-730.00ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HG... [more]
ANKRD69.296e-730.00ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HG... [more]
ANKRD69.307e-730.00ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HG... [more]
ANKRD69.307e-730.00ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HG... [more]
ANKRD61.052e-630.88ankyrin repeat domain 6 [Source:HGNC Symbol;Acc:HG... [more]
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BLAST of GL25839 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
trp-42.426e-932.35TRP (Transient receptor potential) channel family ... [more]
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BLAST of GL25839 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nompC3.728e-1634.33gene:FBgn0016920 transcript:FBtr0347408[more]
nompC4.020e-1634.33gene:FBgn0016920 transcript:FBtr0300012[more]
nompC4.026e-1634.33gene:FBgn0016920 transcript:FBtr0347409[more]
nompC4.179e-1634.33gene:FBgn0016920 transcript:FBtr0343224[more]
nompC4.342e-1634.33gene:FBgn0016920 transcript:FBtr0304843[more]
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BLAST of GL25839 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ankrd6b6.649e-628.68ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE... [more]
ankrd6b7.305e-628.68ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE... [more]
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BLAST of GL25839 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of GL25839 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Ankrd64.798e-729.23ankyrin repeat domain 6 [Source:MGI Symbol;Acc:MGI... [more]
Ankrd64.798e-729.23ankyrin repeat domain 6 [Source:MGI Symbol;Acc:MGI... [more]
Ankrd64.798e-729.23ankyrin repeat domain 6 [Source:MGI Symbol;Acc:MGI... [more]
Ankrd65.079e-729.23ankyrin repeat domain 6 [Source:MGI Symbol;Acc:MGI... [more]
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BLAST of GL25839 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q69ZU8|ANKR6_MOUSE3.356e-629.23Ankyrin repeat domain-containing protein 6 OS=Mus ... [more]
sp|Q9Y2G4|ANKR6_HUMAN4.469e-630.00Ankyrin repeat domain-containing protein 6 OS=Homo... [more]
sp|Q9HFE7|YNW5_SCHPO4.981e-639.51Ankyrin repeat-containing protein P16F5.05c OS=Sch... [more]
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BLAST of GL25839 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1I8FYB31.107e-2142.03ANK_REP_REGION domain-containing protein OS=Macros... [more]
A0A1I8GYH21.412e-2042.03ANK_REP_REGION domain-containing protein OS=Macros... [more]
K1QCS66.786e-2040.58Ankyrin-1 OS=Crassostrea gigas OX=29159 GN=CGI_100... [more]
A0A267FPR41.012e-1942.03ANK_REP_REGION domain-containing protein OS=Macros... [more]
A0A267DZS71.104e-1942.03ANK_REP_REGION domain-containing protein OS=Macros... [more]
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BLAST of GL25839 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ENSAMXT00000016978.24.875e-1134.06serine/threonine-protein phosphatase 6 regulatory ... [more]
ENSAMXT00000048767.15.210e-1134.06serine/threonine-protein phosphatase 6 regulatory ... [more]
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BLAST of GL25839 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of GL25839 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of GL25839 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of GL25839 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ankrd274.683e-730.28ankyrin repeat domain 27 [Source:NCBI gene;Acc:101... [more]
ankrd274.861e-730.28ankyrin repeat domain 27 [Source:NCBI gene;Acc:101... [more]
ankrd274.932e-730.28ankyrin repeat domain 27 [Source:NCBI gene;Acc:101... [more]
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BLAST of GL25839 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000020707.13.989e-4398.85SMESG000020707.1[more]
SMESG000020706.11.027e-3150.72SMESG000020706.1[more]
SMESG000020706.11.069e-3151.47SMESG000020706.1[more]
SMESG000020706.11.341e-3150.72SMESG000020706.1[more]
SMESG000020705.14.820e-3154.20SMESG000020705.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30031634 ID=SMED30031634|Name=GL25839|organism=Schmidtea mediterranea sexual|type=transcript|length=547bp
AAAAAGTGGTGCAAATGTAAATGATAAAATAAAATCCGGAGAAACAGTGC
TTCATATTTTATCAAGATTAGGGAATTTAGATATTTTAAAGTTGTTATTG
GATGAAAAAGCGGATCCATTTTCTCAATGTAACGAAGGGAATAGTGCTTT
GCACAGTGCAGTTAAACATAGACATTTTGCATGTGTGAAAGAAATTTTGG
AGTTTTTAACAAGAAATCACTCGACGACCAAAGCAAAGAATTTAATCAAT
CTAAAAAATAATGAAGGAGAAACAGCAGTTCATTTTGCTGCGAAATTAGT
TCAAATGAAACAAGAATTGAGTATAAGTGAAGCTCAAATTATGAAAATAT
TATTAGAAAATGGGGGAGATATGAAAATCGTGACAAAATCTGTTGGTGAA
AGCTTTTTGTTATTCCTTAATTTTCAATTGATAGATTTTGTGAATTATGA
CAAAACAATATTATAAACATATATTACATTGCTTTAAATATATATATATT
TAAATTCAATAACATACAGAGATAAATTAGTAAAACATTTAAAATTG
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protein sequence of SMED30031634-orf-1

>SMED30031634-orf-1 ID=SMED30031634-orf-1|Name=SMED30031634-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=155bp
KSGANVNDKIKSGETVLHILSRLGNLDILKLLLDEKADPFSQCNEGNSAL
HSAVKHRHFACVKEILEFLTRNHSTTKAKNLINLKNNEGETAVHFAAKLV
QMKQELSISEAQIMKILLENGGDMKIVTKSVGESFLLFLNFQLIDFVNYD
KTIL*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0001964startle response
GO:0007605sensory perception of sound
GO:0007638mechanosensory behavior
GO:0010996response to auditory stimulus
GO:0034220ion transmembrane transport
GO:0040011locomotion
GO:0050954sensory perception of mechanical stimulus
GO:0050975sensory perception of touch
GO:0050976detection of mechanical stimulus involved in sensory perception of touch
GO:0071260cellular response to mechanical stimulus
GO:0006811ion transport
GO:0055085transmembrane transport
GO:0070588calcium ion transmembrane transport
Vocabulary: cellular component
TermDefinition
GO:0005929cilium
GO:0030425dendrite
GO:0043025neuronal cell body
GO:0044214spanning component of plasma membrane
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0005216ion channel activity
GO:0005262calcium channel activity
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 45..75
e-value: 3.1
score: 16.8
coord: 12..41
e-value: 0.0063
score: 25.7
coord: 88..126
e-value: 190.0
score: 10.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 12..44
score: 9.725
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 88..129
score: 9.297
IPR036770Ankyrin repeat-containing domain superfamilyGENE3DG3DSA:1.25.40.20coord: 1..140
e-value: 7.8E-27
score: 95.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILYSSF48403Ankyrin repeatcoord: 2..129
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 3..67
e-value: 7.0E-11
score: 42.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..129
score: 23.233
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 3..67