Collagen F-8
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30031625 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 17Note: Hover over icons to view figure legend
Homology
BLAST of Collagen F-8 vs. Ensembl Human
Match: COL11A1 (collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]) HSP 1 Score: 144.821 bits (364), Expect = 7.589e-34 Identity = 71/239 (29.71%), Postives = 127/239 (53.14%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L++++ ++ P+G+++NPAR C+D+ LS+P G +WIDPN G DS +V C F +TC+ K+S ++S+ K E P W+ L LD GN + M Q+ FL++L A Q T C+++A +YD + ++D A+R ND + + +K+ + D C R + + +I+ K + +PIVD+ + DFG+ NQK Sbjct: 1460 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGG-ETCIYPDKKSEGVRISSWPK-EKPGSWFSEFKRGKLLSYLDVEGNSIN------MVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIKT----------LYDGCASR-KGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKF 1679 HSP 2 Score: 98.9821 bits (245), Expect = 6.809e-20 Identity = 60/227 (26.43%), Postives = 95/227 (41.85%), Query Frame = 2 Query: 269 FSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 F++ ++T R ++ D+L+ + P I TG C+ GS Y V +A L + +F FSIL T K + + S+ + +G + ++GR V F + G ++ + D WHRVA+SV + + VDC+ PL R + + I V G L + + G IQ I +AAY CE Y+ DC Sbjct: 17 FTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYSPDC 243 HSP 3 Score: 58.151 bits (139), Expect = 2.156e-7 Identity = 52/120 (43.33%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAKGAVGPRGT------PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G GE+GE G PG G GL G G G G G DG G G GPTGDPG G + G+ G PG G GP+G+ PGA G G RG G PGP G G G +G+ Sbjct: 655 RGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGS 774 HSP 4 Score: 54.299 bits (129), Expect = 2.501e-6 Identity = 43/95 (45.26%), Postives = 50/95 (52.63%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G TG+PG G G G +G PG G PG G +GS G G G G+ G G+ G PG +G GP G RG+ G RG G PGP Sbjct: 695 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTG---PRGSRGARGPTGKPGP 786 HSP 5 Score: 53.5286 bits (127), Expect = 4.743e-6 Identity = 44/92 (47.83%), Postives = 50/92 (54.35%), Query Frame = 2 Query: 3827 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAI---GPRGQRGDPGLAGER 4093 +G+ GP GE G GP+G GPTGD G G G +G GV G+ G G QG KG G G G GE G +G GPRGQRG G G R Sbjct: 684 EVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSR 775 HSP 6 Score: 52.7582 bits (125), Expect = 7.861e-6 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G+ GP G G +GP G+ GP+G G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP G G RG RG G G + Sbjct: 692 GEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPK 787
BLAST of Collagen F-8 vs. Ensembl Human
Match: COL11A1 (collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]) HSP 1 Score: 143.665 bits (361), Expect = 2.008e-33 Identity = 71/239 (29.71%), Postives = 127/239 (53.14%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L++++ ++ P+G+++NPAR C+D+ LS+P G +WIDPN G DS +V C F +TC+ K+S ++S+ K E P W+ L LD GN + M Q+ FL++L A Q T C+++A +YD + ++D A+R ND + + +K+ + D C R + + +I+ K + +PIVD+ + DFG+ NQK Sbjct: 1537 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNF-TSGGETCIYPDKKSEGVRISSWPK-EKPGSWFSEFKRGKLLSYLDVEGNSIN------MVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIKT----------LYDGCASR-KGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKF 1756 HSP 2 Score: 98.5969 bits (244), Expect = 9.931e-20 Identity = 60/227 (26.43%), Postives = 95/227 (41.85%), Query Frame = 2 Query: 269 FSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 F++ ++T R ++ D+L+ + P I TG C+ GS Y V +A L + +F FSIL T K + + S+ + +G + ++GR V F + G ++ + D WHRVA+SV + + VDC+ PL R + + I V G L + + G IQ I +AAY CE Y+ DC Sbjct: 17 FTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYSPDC 243 HSP 3 Score: 58.151 bits (139), Expect = 1.835e-7 Identity = 52/120 (43.33%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAKGAVGPRGT------PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G GE+GE G PG G GL G G G G G DG G G GPTGDPG G + G+ G PG G GP+G+ PGA G G RG G PGP G G G +G+ Sbjct: 732 RGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGS 851 HSP 4 Score: 54.6842 bits (130), Expect = 2.413e-6 Identity = 43/95 (45.26%), Postives = 50/95 (52.63%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G TG+PG G G G +G PG G PG G +GS G G G G+ G G+ G PG +G GP G RG+ G RG G PGP Sbjct: 772 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTG---PRGSRGARGPTGKPGP 863 HSP 5 Score: 53.9138 bits (128), Expect = 3.676e-6 Identity = 44/92 (47.83%), Postives = 50/92 (54.35%), Query Frame = 2 Query: 3827 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAI---GPRGQRGDPGLAGER 4093 +G+ GP GE G GP+G GPTGD G G G +G GV G+ G G QG KG G G G GE G +G GPRGQRG G G R Sbjct: 761 EVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSR 852 HSP 6 Score: 53.1434 bits (126), Expect = 6.196e-6 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G+ GP G G +GP G+ GP+G G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP G G RG RG G G + Sbjct: 769 GEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPK 864
BLAST of Collagen F-8 vs. Ensembl Human
Match: COL11A1 (collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]) HSP 1 Score: 143.28 bits (360), Expect = 2.408e-33 Identity = 71/239 (29.71%), Postives = 127/239 (53.14%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L++++ ++ P+G+++NPAR C+D+ LS+P G +WIDPN G DS +V C F +TC+ K+S ++S+ K E P W+ L LD GN + M Q+ FL++L A Q T C+++A +YD + ++D A+R ND + + +K+ + D C R + + +I+ K + +PIVD+ + DFG+ NQK Sbjct: 1576 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNF-TSGGETCIYPDKKSEGVRISSWPK-EKPGSWFSEFKRGKLLSYLDVEGNSIN------MVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIKT----------LYDGCASR-KGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKF 1795 HSP 2 Score: 98.2117 bits (243), Expect = 1.343e-19 Identity = 60/227 (26.43%), Postives = 95/227 (41.85%), Query Frame = 2 Query: 269 FSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 F++ ++T R ++ D+L+ + P I TG C+ GS Y V +A L + +F FSIL T K + + S+ + +G + ++GR V F + G ++ + D WHRVA+SV + + VDC+ PL R + + I V G L + + G IQ I +AAY CE Y+ DC Sbjct: 17 FTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYSPDC 243 HSP 3 Score: 58.5362 bits (140), Expect = 1.678e-7 Identity = 52/120 (43.33%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAKGAVGPRGT------PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G GE+GE G PG G GL G G G G G DG G G GPTGDPG G + G+ G PG G GP+G+ PGA G G RG G PGP G G G +G+ Sbjct: 771 RGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGS 890 HSP 4 Score: 54.6842 bits (130), Expect = 2.263e-6 Identity = 43/95 (45.26%), Postives = 50/95 (52.63%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G TG+PG G G G +G PG G PG G +GS G G G G+ G G+ G PG +G GP G RG+ G RG G PGP Sbjct: 811 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTG---PRGSRGARGPTGKPGP 902 HSP 5 Score: 53.9138 bits (128), Expect = 3.447e-6 Identity = 44/92 (47.83%), Postives = 50/92 (54.35%), Query Frame = 2 Query: 3827 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAI---GPRGQRGDPGLAGER 4093 +G+ GP GE G GP+G GPTGD G G G +G GV G+ G G QG KG G G G GE G +G GPRGQRG G G R Sbjct: 800 EVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSR 891 HSP 6 Score: 53.5286 bits (127), Expect = 5.617e-6 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G+ GP G G +GP G+ GP+G G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP G G RG RG G G + Sbjct: 808 GEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPK 903
BLAST of Collagen F-8 vs. Ensembl Human
Match: COL11A1 (collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]) HSP 1 Score: 143.28 bits (360), Expect = 2.416e-33 Identity = 71/239 (29.71%), Postives = 127/239 (53.14%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L++++ ++ P+G+++NPAR C+D+ LS+P G +WIDPN G DS +V C F +TC+ K+S ++S+ K E P W+ L LD GN + M Q+ FL++L A Q T C+++A +YD + ++D A+R ND + + +K+ + D C R + + +I+ K + +PIVD+ + DFG+ NQK Sbjct: 1588 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNF-TSGGETCIYPDKKSEGVRISSWPK-EKPGSWFSEFKRGKLLSYLDVEGNSIN------MVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIKT----------LYDGCASR-KGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKF 1807 HSP 2 Score: 98.5969 bits (244), Expect = 1.128e-19 Identity = 60/227 (26.43%), Postives = 95/227 (41.85%), Query Frame = 2 Query: 269 FSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 F++ ++T R ++ D+L+ + P I TG C+ GS Y V +A L + +F FSIL T K + + S+ + +G + ++GR V F + G ++ + D WHRVA+SV + + VDC+ PL R + + I V G L + + G IQ I +AAY CE Y+ DC Sbjct: 17 FTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYSPDC 243 HSP 3 Score: 58.5362 bits (140), Expect = 1.531e-7 Identity = 52/120 (43.33%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAKGAVGPRGT------PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G GE+GE G PG G GL G G G G G DG G G GPTGDPG G + G+ G PG G GP+G+ PGA G G RG G PGP G G G +G+ Sbjct: 783 RGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGS 902 HSP 4 Score: 54.6842 bits (130), Expect = 2.064e-6 Identity = 43/95 (45.26%), Postives = 50/95 (52.63%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G TG+PG G G G +G PG G PG G +GS G G G G+ G G+ G PG +G GP G RG+ G RG G PGP Sbjct: 823 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTG---PRGSRGARGPTGKPGP 914 HSP 5 Score: 54.299 bits (129), Expect = 3.253e-6 Identity = 44/92 (47.83%), Postives = 50/92 (54.35%), Query Frame = 2 Query: 3827 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAI---GPRGQRGDPGLAGER 4093 +G+ GP GE G GP+G GPTGD G G G +G GV G+ G G QG KG G G G GE G +G GPRGQRG G G R Sbjct: 812 EVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSR 903 HSP 6 Score: 53.5286 bits (127), Expect = 5.345e-6 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G+ GP G G +GP G+ GP+G G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP G G RG RG G G + Sbjct: 820 GEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPK 915
BLAST of Collagen F-8 vs. Ensembl Human
Match: COL5A1 (collagen type V alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2209]) HSP 1 Score: 137.502 bits (345), Expect = 1.603e-31 Identity = 69/239 (28.87%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L+ + ++RP+G++ NPAR C+D+ L +P G +W+DPN G DS +V C F TCV K+S +TS+ K ENP W+ L +D GN + + Q+ FL++L A Q VT C ++ + D+ ++D A+R ND + + +++ + D C + + + +I K E +PIVDI DFG +QK Sbjct: 1608 MEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGG-STCVFPDKKSEGARITSWPK-ENPGSWFSEFKRGKLLSYVDAEGNPVGVV------QMTFLRLLSASAHQNVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRA----------LVDGCATK-KGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKF 1827 HSP 2 Score: 98.9821 bits (245), Expect = 7.677e-20 Identity = 65/225 (28.89%), Postives = 97/225 (43.11%), Query Frame = 2 Query: 317 NRTSSHGDILQFIKIAQRPF-IQTQTGMC----SMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVL----HFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDC-PGLHDIMMNQQPD 943 +R + D+L+ + P I TG C S G + Y V +A L + ++ A FSIL T K + S + S+ + G + ++GR V H +PG + L D WHR+ALSV + L +DC+ L R +I+ I+V G L + + G IQ L V AAY CE Y+ DC + D +Q P+ Sbjct: 34 SRAAQPADLLKVLDFHNLPDGITKTTGFCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKTTKFLDRSDHPMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQSQDPN 258
BLAST of Collagen F-8 vs. Ensembl Celegans
Match: col-135 (COLlagen [Source:UniProtKB/TrEMBL;Acc:G3MU58]) HSP 1 Score: 85.8853 bits (211), Expect = 1.356e-16 Identity = 140/352 (39.77%), Postives = 175/352 (49.72%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLP------------GIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 +G G GE+G G PGS G G G+ G PG GD G+DG +G+ G+ G GD G DG G DGNPG+KG G +G G+ G G +G +G PG G G KG G G G G KG +G G G G G G +G G G KG+ G DG G GD G +G +G G G G G G G KG G G+ GDKG G GP G G+ G P G +G+ G PG G+ G G GP+G +G+ G PG +G G G++G G+KGD+ G G G+ G G G G G+KG+ G G G+ G PG G G+PG K Sbjct: 162 KGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDK---------------GEKGQDGQPGQKGQDGQPGQKGDKGDKG-QGEKGQDGQPGQKGQDGQPGQK 497 HSP 2 Score: 67.0106 bits (162), Expect = 9.989e-11 Identity = 48/100 (48.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 2432 ERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 E+GE G PG G G G G+ GS G G GE+G+ G+ GP GD G DG G DG PG+KG G G GA GN G +G G G G +GAKG++G Sbjct: 152 EKGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGA 251 HSP 3 Score: 63.5438 bits (153), Expect = 1.113e-9 Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 ++G +G PG +G+ GE G+ G G+ G PGS GD G+DG +G+ G+ G GD G+ GL G G+ GA G G +G G +G G +G DG PG G GA G +G Sbjct: 248 DKGANGTPGSKGDKGEKGA---DGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGA 353 HSP 4 Score: 61.2326 bits (147), Expect = 4.864e-9 Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 ++G G PG +G+ GE G+ G G+ G PGS GD G+DG +G+ G+ G GD G+ GL G G+ GA G G +G G +G G +G DG PG G G KG Sbjct: 311 DKGADGTPGAKGDKGEKGA---DGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKG 412 HSP 5 Score: 59.3066 bits (142), Expect = 1.915e-8 Identity = 51/121 (42.15%), Postives = 65/121 (53.72%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAK------GAVGPRGTPGARGNIGYRGFD------GIPGPPGPNGAKGEQGT 2731 ++G G G +G G PGS G TG G G+ G+ GD G+ G+ GS+G G+ G DG G DG PG+K GA G GTPG +G+ G +G D G G PG G KGE+G Sbjct: 212 SKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGA---NGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGA 329
BLAST of Collagen F-8 vs. Ensembl Celegans
Match: col-135 (COLlagen [Source:UniProtKB/TrEMBL;Acc:G3MU58]) HSP 1 Score: 72.0182 bits (175), Expect = 3.232e-12 Identity = 50/108 (46.30%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G GE+G G PGS G G G+ G PG GD G+DG +G+ G+ G GD G DG G DGNPG+KG G +G G+ G G +G +G PG G G KG G Sbjct: 162 KGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGA 269 HSP 2 Score: 70.8626 bits (172), Expect = 6.031e-12 Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPG---SDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G G PG++G+ GE G GP G G+ G PG+ GD G +DG +G+ G+ G GD G+ GL G G+ GA GA G GTPGA+G+ G +G DG G G GAKG++G Sbjct: 288 KGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKG 397 HSP 3 Score: 66.6254 bits (161), Expect = 1.496e-10 Identity = 54/124 (43.55%), Postives = 71/124 (57.26%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSG------IDGNPGAKG---------AVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 ++G +G PG +G+ GE G+ G G+ G PGS GD G+DG +G+ G+ G GD G+ GL G DG PGAKG A G GTPG++G+ G +G DG G G +GAKG GT Sbjct: 248 DKGANGTPGSKGDKGEKGA---DGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGT 368 HSP 4 Score: 66.2402 bits (160), Expect = 1.657e-10 Identity = 48/100 (48.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 2432 ERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 E+GE G PG G G G G+ GS G G GE+G+ G+ GP GD G DG G DG PG+KG G G GA GN G +G G G G +GAKG++G Sbjct: 152 EKGEKGSPGQKGDKGEKGEKGSNGSPGSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGA 251 HSP 5 Score: 65.0846 bits (157), Expect = 3.634e-10 Identity = 52/122 (42.62%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPG---SDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRG------------TPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G G PG +G+ GE G GP G G+ G PG+ GD G +DG +G+ G+ G GD G DG G DG PG KG G +G TPGA+G+ G +G DG G G G+KG++G Sbjct: 384 KGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKG 505 HSP 6 Score: 64.3142 bits (155), Expect = 7.252e-10 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGI---DGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 G G++GE G G+ GP G G+ GA G+ G PGS G++GS G++G G+PG G +G G+ GAKG G GTPG++G+ G +G DG G G G+KG++G Sbjct: 178 GSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGA 284 HSP 7 Score: 63.929 bits (154), Expect = 1.020e-9 Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G G G++G G PGS G G G+ GA G+ G PGS G++G+ G++G G PG+ G G G G KG G GTPGA+G+ G +G DG G G G+KG++G Sbjct: 240 KGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKG 346 HSP 8 Score: 62.7734 bits (151), Expect = 2.142e-9 Identity = 49/110 (44.55%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPR---GTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G G G +G G PG+ G G G+ GA G+ G PG+ G++G G GP GD G DG G G+ G KGA G + GTPG++G+ G G G G PG G KGE+G Sbjct: 354 KGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKG 463 HSP 9 Score: 61.2326 bits (147), Expect = 5.910e-9 Identity = 51/113 (45.13%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGA---PGSTGDPGSDGERGSIG---SRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 G G GE+G G PG G G G+ GA PGS GD GSDG +G+ G S+G TGD G+ G G G+ GA G G +G G +G G +G DG PG G GA G +G Sbjct: 178 GSKGDKGEKGADGNPGPKGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGA 290 HSP 10 Score: 61.2326 bits (147), Expect = 6.602e-9 Identity = 54/129 (41.86%), Postives = 70/129 (54.26%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAK---------GAVGPRGTPGARGNIGYRGFD------GIPGPPGPNGAKGEQG 2728 ++G G PG +G+ GE G+ G G+ G PGS GD G+DG +G+ G+ G GD G+ GL G DG PGAK GA G GTPG++G+ G +G D G G PG G KGE+G Sbjct: 407 DKGADGTPGAKGDKGEKGA---DGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKG 532 HSP 11 Score: 60.8474 bits (146), Expect = 7.763e-9 Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDG---ERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G PG +G+ GE G GP G G+ GA G+ G PG+ G E+G+ G++G G PG G G G G KG G GTPGA+G+ G +G DG G G G+KG++G Sbjct: 333 KGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGA 443 HSP 12 Score: 60.4622 bits (145), Expect = 9.689e-9 Identity = 51/110 (46.36%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGA---PGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G G G +G G PGS G G G+ GA PGS GD G GE+GS G++G G G G G G GA GA G GTPG++G+ G G G G PG G KGE+G Sbjct: 195 KGDKGADGAKGADGTPGSKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGANGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKG 304 HSP 13 Score: 58.5362 bits (140), Expect = 4.126e-8 Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPG---SDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAKGAVGPRGT---PGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G G PG++G+ GE G GP G G+ G PG+ GD G +DG +G+ G+ G GD G GL G DG PG+KG G +G PG +G+ G +G DG PG G +G G++G Sbjct: 447 KGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGDKGLDGPKGDKGADGTPGSKGDKGEKGDIGQPGQKGDKGEKGQDGQPGQKGQDGQPGQKG 565 HSP 14 Score: 58.5362 bits (140), Expect = 4.493e-8 Identity = 49/121 (40.50%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERG------------SIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 ++G G G +G G PGS G G G+ GA G+ G G GE+G + G++G GD G DG G DG PG+KG G +G G +G+ G G G G PG G KGE+GT Sbjct: 260 DKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGADGAKGADGTPGSKGDKGEKGLDGPKGDKGADGAKGANGTPGAKGDKGEKGT 380 HSP 15 Score: 58.151 bits (139), Expect = 5.801e-8 Identity = 51/126 (40.48%), Postives = 67/126 (53.17%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGS------RGPTGDPGKDGLSGIDGNPGAK------GAVGPRGTPGARGNIGYRGFD------GIPGPPGPNGAKGEQGT 2731 +G +G PG +G+ GE G+ G G G+ GA G G+ G DG +G G+ +G G+ G DG G DG PG+K GA G GTPG +G+ G +G D G G PG G KGE+G Sbjct: 363 KGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGA 488 HSP 16 Score: 57.7658 bits (138), Expect = 6.997e-8 Identity = 50/121 (41.32%), Postives = 65/121 (53.72%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAK------GAVGPRGTPGARGNIGYRGFD------GIPGPPGPNGAKGEQGT 2731 ++G G G +G G PGS G TG G G+ G+ GD G+ G+ GS+G G+ G DG G DG PG+K GA G GTPG +G+ G +G D G G PG G KG++G Sbjct: 212 SKGDKGSDGAKGADGNPGSKGDTGDKGEKGSDGAKGDKGA---NGTPGSKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGDKGA 329 HSP 17 Score: 55.8398 bits (133), Expect = 2.977e-7 Identity = 57/135 (42.22%), Postives = 75/135 (55.56%), Query Frame = 2 Query: 3032 GPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQ---GEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 GP G G+ G G G+PG GD GE G G KG +GT G+ G+ G++G+ G G+ G G KGD+G+ G G+ G+ G G G G +G G G G G+KGE G GP G+ G G PG +G+ G K Sbjct: 352 GPKGDKGADGAKGANGTPGAKGDKGEKGTDGAKGADGTPGAKGDKGEKGLDGPKGDKGADGTPGAKGDKGEKGADGAKGADGTPGSKGDKGADGAKGADGTPGQKGDKGEKGLDGPKGDKGADGTPGAKGDKGEK 486
BLAST of Collagen F-8 vs. Ensembl Celegans
Match: col-54 (COLlagen [Source:UniProtKB/TrEMBL;Acc:O44774]) HSP 1 Score: 59.6918 bits (143), Expect = 5.731e-9 Identity = 54/126 (42.86%), Postives = 62/126 (49.21%), Query Frame = 2 Query: 2408 QGPSGYP---------------------GERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTP---GARGNIGYRGFDGIPGPPGPNGA 2713 QGP G P GE+G GEPG G TG IG GAPG G+ GS G G+ G GP G+PGKDG G G+ G G G +G P G G+ G G DG PG PGP+ A Sbjct: 140 QGPDGAPGAPGPDGQPGAPGSNGNPGSAGEQGSEGEPGDAGATGEIGVAGAPGKNGNRGS-GAPGAPGPEGPIGEPGKDGQQGPHGDVGGDGTEGIQGAPGKDGENGSDGVAGSDGAPGAPGPDAA 264 HSP 2 Score: 54.299 bits (129), Expect = 3.330e-7 Identity = 51/120 (42.50%), Postives = 63/120 (52.50%), Query Frame = 2 Query: 2414 PSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGI--------DGNPGAKGAVGPRGTPGA------RGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 P+G PG +G G PG+ GP G GAPGS G+PGS GE+GS G G G G+ G++G G PGA G GP G PG G++G G +GI G PG +G G G Sbjct: 133 PAGEPGPQGPDGAPGAPGPDG---QPGAPGSNGNPGSAGEQGSEGEPGDAGATGEIGVAGAPGKNGNRGSGAPGAPGPEGPIGEPGKDGQQGPHGDVGGDGTEGIQGAPGKDGENGSDGV 249 HSP 3 Score: 50.8322 bits (120), Expect = 4.252e-6 Identity = 50/130 (38.46%), Postives = 59/130 (45.38%), Query Frame = 2 Query: 3032 GPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPG 3421 GP GP G+PG PG G PG PG G G G +GS G PGD G G G G G+ G+R G G GP G +GE G++G GP G+VG G G+QG PG Sbjct: 138 GPQGPDGAPGAPGPDGQPGAPGSNGN------PGSAGEQGSEGEPGDAGATGEIGVAGAPGKNGNR----------------------GSGAPGAPGPEGPIGEPGKDGQQGPHGDVGGDGTEGIQGAPG 239
BLAST of Collagen F-8 vs. Ensembl Celegans
Match: col-149 (COLlagen [Source:UniProtKB/TrEMBL;Acc:Q17417]) HSP 1 Score: 59.3066 bits (142), Expect = 8.562e-9 Identity = 50/106 (47.17%), Postives = 54/106 (50.94%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGA---PGSTGDPGSDGERG--SIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGE 2722 G PG RG G PG GP G G G PG G PG DG RG S G+ G G PG+ G G G PG +G GP G G G G RG DG PG PG G +G Sbjct: 174 GQPGRRGNDGRPGQPGPQGNAGQPGRDGNPGQPGHPGKDGRRGHGSPGAPGRAGQPGRQGAPGNPGRPGERGPSGPCGPAGRSGQPGNRGSDGHPGAPGNPGLQGS 279
BLAST of Collagen F-8 vs. Ensembl Celegans
Match: dpy-17 (DumPY: shorter than wild-type [Source:UniProtKB/TrEMBL;Acc:Q20778]) HSP 1 Score: 59.3066 bits (142), Expect = 1.154e-8 Identity = 61/153 (39.87%), Postives = 69/153 (45.10%), Query Frame = 2 Query: 3023 GPQGPNGPIGSPG------------LPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGN--------PGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPG 3421 GPQGP G G PG +PG GSPG+PG +G GPPG G EG G G PG +G PG PGE G QGE+GDRG G+ GP G G +GE G GP G G PG +GEPG Sbjct: 202 GPQGPPGSQGKPGARGMRGARGQAAMPGRDGSPGMPGSLGPIGPPGAAGEEGPTGEPGADVEHQIGLPGAKGTPGAPGESGDQGEQGDRGA------------------------TGIAGPPGERGPQGEKGDDGPNGAAGS---PGEEGEPG 327 HSP 2 Score: 56.225 bits (134), Expect = 1.200e-7 Identity = 49/107 (45.79%), Postives = 57/107 (53.27%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G + PG G G PGS+GP G G+ G G TG+PG+D E IG G G PG G SG G G +GA G G PG RG G +G D GPNGA G G Sbjct: 222 RGQAAMPGRDGSPGMPGSLGPIGPPGAAGEEGPTGEPGADVEH-QIGLPGAKGTPGAPGESGDQGEQGDRGATGIAGPPGERGPQGEKGDD------GPNGAAGSPG 321 HSP 3 Score: 54.6842 bits (130), Expect = 3.515e-7 Identity = 49/107 (45.79%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QGP G G+ G G G+ G + G G+PG G G G G+ G GPTG+PG D I G PGAKG G G G +G G RG GI GPPG G +GE+G Sbjct: 204 QGPPGSQGKPGARGMRGARGQAAMPGRDGSPGMPGSLGPIGPPGAAGEEGPTGEPGADVEHQI-GLPGAKGTPGAPGESGDQGEQGDRGATGIAGPPGERGPQGEKG 309 HSP 4 Score: 51.2174 bits (121), Expect = 4.853e-6 Identity = 40/84 (47.62%), Postives = 48/84 (57.14%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGS-----VGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPG 2647 GP G GE G TGEPG+ +G G G+ GAPG +GD G G+RG+ G GP G+ G G G DG GA G+ G G PG Sbjct: 244 GPPGAAGEEGPTGEPGADVEHQIGLPGAKGTPGAPGESGDQGEQGDRGATGIAGPPGERGPQGEKGDDGPNGAAGSPGEEGEPG 327
BLAST of Collagen F-8 vs. Ensembl Fly
Match: CG42342 (gene:FBgn0259244 transcript:FBtr0303650) HSP 1 Score: 59.3066 bits (142), Expect = 3.629e-8 Identity = 47/99 (47.47%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPG 2701 +QGP G PG G GE G GP+G G G PG G G+ GE G G RG G PG DG+ G +G G +G+ G G PG RG G RG G G PG Sbjct: 655 DQGPMGLPGPMGMRGESGPSGPSGKAGIPGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPG 753 HSP 2 Score: 51.9878 bits (123), Expect = 5.352e-6 Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGE---QGPTGDRGIKGGVGIQGMKGVE---GVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G QGP+G PG G +GE GP+G GI G G+ GMKG + G +G +G GL G G G+EGP GE G +G GP G+RG G G++ Sbjct: 654 GDQGPMGLPGPMGMRGESGPSGPSGKAGIPGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDK 746
BLAST of Collagen F-8 vs. Ensembl Fly
Match: CG42342 (gene:FBgn0259244 transcript:FBtr0336781) HSP 1 Score: 58.9214 bits (141), Expect = 3.905e-8 Identity = 47/99 (47.47%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPG 2701 +QGP G PG G GE G GP+G G G PG G G+ GE G G RG G PG DG+ G +G G +G+ G G PG RG G RG G G PG Sbjct: 632 DQGPMGLPGPMGMRGESGPSGPSGKAGIPGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPG 730 HSP 2 Score: 51.9878 bits (123), Expect = 5.723e-6 Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGE---QGPTGDRGIKGGVGIQGMKGVE---GVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G QGP+G PG G +GE GP+G GI G G+ GMKG + G +G +G GL G G G+EGP GE G +G GP G+RG G G++ Sbjct: 631 GDQGPMGLPGPMGMRGESGPSGPSGKAGIPGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDK 723
BLAST of Collagen F-8 vs. Ensembl Fly
Match: CG42342 (gene:FBgn0259244 transcript:FBtr0336782) HSP 1 Score: 58.9214 bits (141), Expect = 4.561e-8 Identity = 47/99 (47.47%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPG 2701 +QGP G PG G GE G GP+G G G PG G G+ GE G G RG G PG DG+ G +G G +G+ G G PG RG G RG G G PG Sbjct: 637 DQGPMGLPGPMGMRGESGPSGPSGKAGIPGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPG 735 HSP 2 Score: 51.9878 bits (123), Expect = 6.295e-6 Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGE---QGPTGDRGIKGGVGIQGMKGVE---GVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G QGP+G PG G +GE GP+G GI G G+ GMKG + G +G +G GL G G G+EGP GE G +G GP G+RG G G++ Sbjct: 636 GDQGPMGLPGPMGMRGESGPSGPSGKAGIPGPPGLDGMKGAQGETGHKGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDK 728
BLAST of Collagen F-8 vs. Ensembl Fly
Match: Col4a1 (gene:FBgn0000299 transcript:FBtr0079003) HSP 1 Score: 56.225 bits (134), Expect = 3.972e-7 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 2432 ERGETGEPGSVGPTGLIGSIGAP---GSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIP------GPPGPNGAKGEQGT 2731 E+G G PG +GPTGL G +G P G +GD G G+ G G RG G+ G GL G G PG +G G G PG G G G DGIP G PGP G G+ G+ Sbjct: 87 EKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGS 195 HSP 2 Score: 55.4546 bits (132), Expect = 5.378e-7 Identity = 64/140 (45.71%), Postives = 73/140 (52.14%), Query Frame = 2 Query: 3047 IGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPG---ELGPQ------------GEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPG 3421 IG GLPG+ G PG+ G G GP G KG G GS G PG G PG PG + GPQ G+KGD+G G G G G +G G G G G GP+G GE+G GP G G G PGLPG +GEPG Sbjct: 1320 IGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPG 1459 HSP 3 Score: 54.299 bits (129), Expect = 1.207e-6 Identity = 50/112 (44.64%), Postives = 58/112 (51.79%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGL---------IGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GYPG+RG+ G PG G G+ IG G G G PG DG RG G++G G PG G+ G G+ GA G GP+G G G G RG GIPG G G KG G Sbjct: 887 GYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATG 998 HSP 4 Score: 53.9138 bits (128), Expect = 1.763e-6 Identity = 54/125 (43.20%), Postives = 65/125 (52.00%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSD------GERGSIGSRGPTGDPGK--DGLSGIDGNP---------GAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +QG GY GE+GE GE G GP G+ G+ G G G PG+ G +G IG RG G PG G G+ G P GA G +G RG PG G G G+PGP GP G+KGE+G Sbjct: 1230 SQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEP---GLVGLPGPIGPAGSKGERG 1351 HSP 5 Score: 53.5286 bits (127), Expect = 2.176e-6 Identity = 49/109 (44.95%), Postives = 56/109 (51.38%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGID------GNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G+PG G G PG G GL G G PG G+ G G G G GP G PG DG+ G D G+PG G G +G GA GN G +GF G+ G PG G G Sbjct: 875 GPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAG 983 HSP 6 Score: 53.5286 bits (127), Expect = 2.327e-6 Identity = 60/135 (44.44%), Postives = 70/135 (51.85%), Query Frame = 2 Query: 3020 MGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGT 3424 G +G G GSPGL G G PGV G G G PG G +G G G PG +G+ G+PG G G+ G +G+ G P G G PG G AG+ GP G GEKGE G GP G G G GL+GE G Sbjct: 127 YGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGA 261 HSP 7 Score: 53.1434 bits (126), Expect = 3.073e-6 Identity = 53/118 (44.92%), Postives = 58/118 (49.15%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGER------------GSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GP+G GERG G PG G G G+ G G TG G GER G G +GP+G PG G G G PG G GP G PG RG G +G DG G PG G KGE G Sbjct: 1342 GPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPG 1459 HSP 8 Score: 52.7582 bits (125), Expect = 3.825e-6 Identity = 48/106 (45.28%), Postives = 57/106 (53.77%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGA---KGEQG 2728 G PG+ G G PG G G G G G TG PG GE G G G TG+PGK L + KG G G PGA+G G++G +G+PG PGP G KGE+G Sbjct: 588 GIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKG 693 HSP 9 Score: 51.9878 bits (123), Expect = 6.723e-6 Identity = 51/115 (44.35%), Postives = 59/115 (51.30%), Query Frame = 2 Query: 2408 QGPSGYPGER--GETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSR------GPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G +G PG+ G G PG+ G G G G PG+ G G G +G +G + GP GD G GL GI G GA RG PG RG G RG DGI G GP G KGE G Sbjct: 519 KGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGA------RGPPGERGYPGERGHDGINGQTGPPGEKGEDG 627 HSP 10 Score: 51.6026 bits (122), Expect = 7.956e-6 Identity = 47/105 (44.76%), Postives = 54/105 (51.43%), Query Frame = 2 Query: 2417 SGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 SG PG GE G+ G +GP G+ G G PG G G DG +G GS G G PG G G GN G KG G G PG RG G PG +GAKG++G Sbjct: 901 SGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGI---------PGVSGAKGDKGA 996 HSP 11 Score: 51.6026 bits (122), Expect = 8.298e-6 Identity = 54/122 (44.26%), Postives = 60/122 (49.18%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIG------SIGAPGSTGD---------PGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G PG G GE G GPTG IG S+G PG GD PG GE+G +G GP G G G+ GIDG G GA G G+PG G G +G G PG GP G G G Sbjct: 854 GPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGA 975 HSP 12 Score: 51.6026 bits (122), Expect = 9.027e-6 Identity = 47/109 (43.12%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTG------LIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 G GE G G PG +GP G L GS G PG G PG+ G +G G +G G+ G +G G G+ G +G GP G PG G G G+ G+ G GP GA GE+G Sbjct: 1327 GLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERG 1435
BLAST of Collagen F-8 vs. Ensembl Fly
Match: Col4a1 (gene:FBgn0000299 transcript:FBtr0079002) HSP 1 Score: 56.225 bits (134), Expect = 3.972e-7 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 2432 ERGETGEPGSVGPTGLIGSIGAP---GSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIP------GPPGPNGAKGEQGT 2731 E+G G PG +GPTGL G +G P G +GD G G+ G G RG G+ G GL G G PG +G G G PG G G G DGIP G PGP G G+ G+ Sbjct: 87 EKGNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGS 195 HSP 2 Score: 55.4546 bits (132), Expect = 5.378e-7 Identity = 64/140 (45.71%), Postives = 73/140 (52.14%), Query Frame = 2 Query: 3047 IGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPG---ELGPQ------------GEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPG 3421 IG GLPG+ G PG+ G G GP G KG G GS G PG G PG PG + GPQ G+KGD+G G G G G +G G G G G GP+G GE+G GP G G G PGLPG +GEPG Sbjct: 1320 IGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPG 1459 HSP 3 Score: 54.299 bits (129), Expect = 1.207e-6 Identity = 50/112 (44.64%), Postives = 58/112 (51.79%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGL---------IGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GYPG+RG+ G PG G G+ IG G G G PG DG RG G++G G PG G+ G G+ GA G GP+G G G G RG GIPG G G KG G Sbjct: 887 GYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGIPGVSGAKGDKGATG 998 HSP 4 Score: 53.9138 bits (128), Expect = 1.763e-6 Identity = 54/125 (43.20%), Postives = 65/125 (52.00%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSD------GERGSIGSRGPTGDPGK--DGLSGIDGNP---------GAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +QG GY GE+GE GE G GP G+ G+ G G G PG+ G +G IG RG G PG G G+ G P GA G +G RG PG G G G+PGP GP G+KGE+G Sbjct: 1230 SQGERGYTGEKGEQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEP---GLVGLPGPIGPAGSKGERG 1351 HSP 5 Score: 53.5286 bits (127), Expect = 2.176e-6 Identity = 49/109 (44.95%), Postives = 56/109 (51.38%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGID------GNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G+PG G G PG G GL G G PG G+ G G G G GP G PG DG+ G D G+PG G G +G GA GN G +GF G+ G PG G G Sbjct: 875 GPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAG 983 HSP 6 Score: 53.5286 bits (127), Expect = 2.327e-6 Identity = 60/135 (44.44%), Postives = 70/135 (51.85%), Query Frame = 2 Query: 3020 MGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGT 3424 G +G G GSPGL G G PGV G G G PG G +G G G PG +G+ G+PG G G+ G +G+ G P G G PG G AG+ GP G GEKGE G GP G G G GL+GE G Sbjct: 127 YGQRGDKGERGSPGLHGQAGVPGVQGPAGNPGAPGINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGA 261 HSP 7 Score: 53.1434 bits (126), Expect = 3.073e-6 Identity = 53/118 (44.92%), Postives = 58/118 (49.15%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGER------------GSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GP+G GERG G PG G G G+ G G TG G GER G G +GP+G PG G G G PG G GP G PG RG G +G DG G PG G KGE G Sbjct: 1342 GPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGFTGPKGRDGRDGTPGLPGQKGEPG 1459 HSP 8 Score: 52.7582 bits (125), Expect = 3.825e-6 Identity = 48/106 (45.28%), Postives = 57/106 (53.77%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGA---KGEQG 2728 G PG+ G G PG G G G G G TG PG GE G G G TG+PGK L + KG G G PGA+G G++G +G+PG PGP G KGE+G Sbjct: 588 GIPGKDGARGPPGERGYPGERGHDGINGQTGPPGEKGEDGRTGLPGATGEPGKPALCDLSLIEPLKGDKGYPGAPGAKGVQGFKGAEGLPGIPGPKGEFGFKGEKG 693 HSP 9 Score: 51.9878 bits (123), Expect = 6.723e-6 Identity = 51/115 (44.35%), Postives = 59/115 (51.30%), Query Frame = 2 Query: 2408 QGPSGYPGER--GETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSR------GPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G +G PG+ G G PG+ G G G G PG+ G G G +G +G + GP GD G GL GI G GA RG PG RG G RG DGI G GP G KGE G Sbjct: 519 KGNAGAPGDSKLGRPGTPGAAGAPGQKGDAGRPGTPGQKGDMGIKGDVGGKCSSCRAGPKGDKGTSGLPGIPGKDGA------RGPPGERGYPGERGHDGINGQTGPPGEKGEDG 627 HSP 10 Score: 51.6026 bits (122), Expect = 7.956e-6 Identity = 47/105 (44.76%), Postives = 54/105 (51.43%), Query Frame = 2 Query: 2417 SGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 SG PG GE G+ G +GP G+ G G PG G G DG +G GS G G PG G G GN G KG G G PG RG G PG +GAKG++G Sbjct: 901 SGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGAPGKRGPAGI---------PGVSGAKGDKGA 996 HSP 11 Score: 51.6026 bits (122), Expect = 8.298e-6 Identity = 54/122 (44.26%), Postives = 60/122 (49.18%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIG------SIGAPGSTGD---------PGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G PG G GE G GPTG IG S+G PG GD PG GE+G +G GP G G G+ GIDG G GA G G+PG G G +G G PG GP G G G Sbjct: 854 GPMGPPGLNGLQGEKGDRGPTGPIGFPGADGSVGYPGDRGDAGLPGVSGRPGIVGEKGDVGPIGPAGVAGPPGVPGIDGVRGRDGAKGEPGSPGLVGMPGNKGDRGAPGNDGPKGFAGVTGA 975 HSP 12 Score: 51.6026 bits (122), Expect = 9.027e-6 Identity = 47/109 (43.12%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTG------LIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 G GE G G PG +GP G L GS G PG G PG+ G +G G +G G+ G +G G G+ G +G GP G PG G G G+ G+ G GP GA GE+G Sbjct: 1327 GLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERG 1435
BLAST of Collagen F-8 vs. Ensembl Zebrafish
Match: col5a3a (collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]) HSP 1 Score: 145.976 bits (367), Expect = 2.137e-34 Identity = 70/239 (29.29%), Postives = 125/239 (52.30%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLS-------EILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++++++ ++ + +++P+G+ +PAR C+++ L +P G +WIDPN G DSI V C F E +TC+ K+ L ++ K E P W+ +D GN + P+ Q+ FL++L A QT T C + +YD N NH +A+R R ND + ++ S + + D C R T + QI++ ++E LP++D+ + DFG++NQK Sbjct: 1657 MEEVFASLNSMKTEVELMRKPLGTFESPARTCKELMLCHPDYKDGEYWIDPNQGCHRDSIRVFCNFTAEG-ETCLHPDKRFETVKLAAWNK-EKPGSWYSQYRKGKQFSYIDTEGNPV------PVVQMTFLKLLSATAMQTFTFSCQNSIGWYDMSNHNHQHALRFRGSNDEEM---------TQDKSPFI-TALYDGCQTRKGLDT-TVLQINSPRSELLPLIDVAISDFGSNNQKF 1876 HSP 2 Score: 90.8929 bits (224), Expect = 1.479e-17 Identity = 51/204 (25.00%), Postives = 92/204 (45.10%), Query Frame = 2 Query: 338 DILQFIKIAQ-RPFIQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVL----HFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 D+L+ +++++ + + G+C+ + + Y + + L + +F +FS++ T K R S + S+ D G L ++GR V H +P + K L D WHR+A SV ++ L++DC+ + + L R D ++V G L + + G IQ L +V +AA C+ Y DC Sbjct: 31 DVLRALELSEDMEGVTVEAGLCTERKGTSETDMAYRIDKKIQLSAPTKQLFPDSAFPENFSLMTTVKAKRNSQFFLLSLYDEQGVQQLGLEMGRSPVFLYEDHKGQPAPDLYPLFRKINLSDGKWHRIAYSVEGKSVTLYLDCKKVQTLELMRGDDPVVSTDGVIVFGTRLLDEEVFEGEIQQLLLVDDPQAASDYCQDYIPDC 234 HSP 3 Score: 67.0106 bits (162), Expect = 2.400e-10 Identity = 50/110 (45.45%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGT---PGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QGP G PGE+G G+PG G G+ G G PG G PG G +G G++GP G PG G+ G DG G KG+ G +G PGA+G +G +G G G PG G G +G Sbjct: 766 QGPIGLPGEKGPEGKPGMQGLPGIDGPPGHPGREGPPGEKGHQGLSGAQGPVGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGAKGEMGIKGDRGDNGSPGSRGEDGPEG 875 HSP 4 Score: 59.6918 bits (143), Expect = 4.220e-8 Identity = 51/108 (47.22%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 QGP GYPG RG G + G GL GS G G G PG+ GE G G RG G PG G DG G KG GP G PG+ G G +G G+PG PG G +G +G+ Sbjct: 814 QGPVGYPGPRGVKG---ADGVRGLKGSKGEKGEDGFPGAKGEMGIKGDRGDNGSPGS---RGEDGPEGPKGQSGPLGEPGSAGIAGEKGKLGVPGLPGYPGRQGSKGS 915 HSP 5 Score: 58.9214 bits (141), Expect = 8.001e-8 Identity = 48/107 (44.86%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G+PG G GE G G +G G +G PG G G+DG RG GS+G G+ DG PGAKG +G +G G G+ G RG DG GP G +G GE G+ Sbjct: 791 GPPGHPGREGPPGEKGHQGLSGAQGPVGYPGPRGVKGADGVRGLKGSKGEKGE---------DGFPGAKGEMGIKGDRGDNGSPGSRGEDGPEGPKGQSGPLGEPGS 888 HSP 6 Score: 57.7658 bits (138), Expect = 1.678e-7 Identity = 47/107 (43.93%), Postives = 54/107 (50.47%), Query Frame = 2 Query: 2465 GPTGLIGSIGAPGSTGDPGSDGERGSIG------------SRGPTGDPGKDGLSGIDGNPGAKGAVGPRG------TPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G +G G PG G PG G +G IG S GP G PGK G SG DG GA G G +G PG GN G+RG G PGP GP+G G +G+ Sbjct: 590 GPPGPLGLTGRPGPVGLPGPSGLKGDIGENGPPGPRGLPGSAGPNGKPGKRGRSGADGGRGAPGETGAKGDRGFDGLPGLPGNKGHRGDRGKPGPQGPHGEPGHKGS 696 HSP 7 Score: 56.6102 bits (135), Expect = 3.520e-7 Identity = 51/118 (43.22%), Postives = 61/118 (51.69%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIG------------SRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GP G G+ G GEPGS G G G +G PG G PG G +GS+G RGP G G DG G +G G +GA GP G PGA+G+ G+ G G G GP G +G G Sbjct: 872 GPEGPKGQSGPLGEPGSAGIAGEKGKLGVPGLPGYPGRQGSKGSVGFPGTAGLEGEKGKRGPAGQAGADGERGPNGARGGRGARGPTGKPGAKGSAGHDGPPGATGERGPQGPQGRNG 989 HSP 8 Score: 56.6102 bits (135), Expect = 3.641e-7 Identity = 55/130 (42.31%), Postives = 60/130 (46.15%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERG------SIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPR---------------------GTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GYPG +G G G G GL G G G G G+DGERG G+RGPTG PG G +G DG PGA G GP+ G PG G G GF G GPPGP G G QG Sbjct: 905 GYPGRQGSKGSVGFPGTAGLEGEKGKRGPAGQAGADGERGPNGARGGRGARGPTGKPGAKGSAGHDGPPGATGERGPQGPQGRNGEAGPKGPNGPPGKDGLPGHPGQRGEPGFQGKTGPPGPAGVVGPQG 1034 HSP 9 Score: 56.6102 bits (135), Expect = 3.894e-7 Identity = 44/99 (44.44%), Postives = 57/99 (57.58%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTG---DRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEI---------GSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G++GP GE G G G QGP G RG+KG G++G+KG +G +G G G KGE+ GS G G G +GPKG GP G+ G G+AGE+ Sbjct: 797 GREGPPGEKGHQGLSGAQGPVGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGAKGEMGIKGDRGDNGSPGSRGEDGPEGPKGQSGPLGEPGSAGIAGEK 895 HSP 10 Score: 56.225 bits (134), Expect = 4.345e-7 Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 2 Query: 3851 GEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGE 4090 GEPGL G QG GP GD G +G G G G++G+ GP G +G G +GS G G G GP+GAIG G +G PG G+ Sbjct: 1229 GEPGLRGQQGMYGPKGDEGERGFKGATGPPGLQGMPGPPGEKGESGHVGSMGPPGQHGPRGPQGAIGGEGPQGMPGAVGQ 1308 HSP 11 Score: 53.1434 bits (126), Expect = 3.717e-6 Identity = 50/126 (39.68%), Postives = 61/126 (48.41%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDG------------------LSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 + GP G G RG G G GP G+ G++G PG G+ G DGE G+ G+ G TG G+ G + GI G+ G KG GP G PG G G G +GI G PG G GE G Sbjct: 1278 SMGPPGQHGPRGPQGAIGGEGPQGMPGAVGQPGVVGEKGEDGEAGNPGNVGETGLVGEKGEVGEKGDAGPPGAAGPPGIRGIPGSDGPKGNPGPLGFPGDSGPSGEPGVNGIDGGPGAKGDNGEPG 1403 HSP 12 Score: 52.373 bits (124), Expect = 7.730e-6 Identity = 65/167 (38.92%), Postives = 79/167 (47.31%), Query Frame = 2 Query: 3017 FMGPQGP------NGPIGSPG---LPGIQGSPGVPGD------------------MGEHGPPGFKGPEGTR---GSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 F GPQGP GP G PG LPGI G PG PG +G GP G KG +G R GS G G+ G PG GE+G +G++GD G G G++GP G +G G +GE G G G G++GVPGLPG G G+K Sbjct: 762 FPGPQGPIGLPGEKGPEGKPGMQGLPGIDGPPGHPGREGPPGEKGHQGLSGAQGPVGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGAKGEMGIKGDRGDN---------------GSPGSRGEDGPEGPKGQSGPLGEPGSAGIAGEKGKLGVPGLPGYPGRQGSK 913
BLAST of Collagen F-8 vs. Ensembl Zebrafish
Match: col2a1a (collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]) HSP 1 Score: 137.502 bits (345), Expect = 8.470e-32 Identity = 74/271 (27.31%), Postives = 123/271 (45.39%), Query Frame = 2 Query: 4259 TRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMS--------QLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 + F ++ E+G D L + ++ + ++ + + + + I+ P GS+ NPAR CRD+ L +P+ SG++W+DPNLGS D+I+V C E+ +TCV + + K++ + W E + N Y S QL FL++L T+A QT+T C + Y D N AI ++ ND I ++E S ++D C + + +KT LPI+DI D G +Q+ Sbjct: 1155 SAFAGLSQPEKGPDPLRYMRADEASSSLRQHDVEVDATLKSINGQIEDIRSPDGSRKNPARSCRDLKLCHPEWKSGDYWVDPNLGSAADAIKVFCNM--ETGETCVKPSTPKIPRKNWWTSKSKAQKHVWFGESM----NGGFHFSYADGSQTPSTTTIQLNFLRLLSTEATQTITYHCKNSVAYMDQATGNLKKAILLQGSNDVEI--------RAEGNSRFTYGVLEDGCKKHTGQWAKTVIEYKTQKTSRLPIMDIAPMDIGGADQEF 1411 HSP 2 Score: 55.8398 bits (133), Expect = 5.866e-7 Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPG 2692 G PG RG G+ G +G G G G PG+ G PG+ GE+G G +G +G PG G SG G G G GP+G GA+G G GF G G Sbjct: 747 GAPGARGAPGDRGEIGAPGPAGFAGPPGADGQPGNKGEQGESGQKGDSGAPGPQGPSGAPGPVGPTGVTGPKGARGAQGAPGATGFPGAAG 837 HSP 3 Score: 53.1434 bits (126), Expect = 3.812e-6 Identity = 40/81 (49.38%), Postives = 45/81 (55.56%), Query Frame = 2 Query: 2429 GERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYR 2671 GERGE G+PG G GL G GAPG G PG G G G+ GPTG G+ G G G G +G GPRG PG G G + Sbjct: 585 GERGEQGQPGPSGFQGLPGPTGAPGEPGKPGDQGVPGEGGAAGPTGPRGERGFPGERGGAGPQGLQGPRGLPGTPGTDGPK 665 HSP 4 Score: 53.1434 bits (126), Expect = 4.254e-6 Identity = 55/130 (42.31%), Postives = 64/130 (49.23%), Query Frame = 2 Query: 2429 GERGETGEPGSVGPTGLIGSIGAPGSTGDPGSD---------GERGSIGSRGP---TGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIG------------------YRGFDGIPGPPGPNGAKGEQG 2728 G+RG GEPGS GP G G GAPG+ G PG D G+RG G GP TGDPG+ G G+ PGA+G G G GA+G +G RG G+ G PGP GA GE G Sbjct: 423 GKRGPRGEPGSAGPLGPPGERGAPGNRGFPGQDGLAGAKGAPGDRGVPGLSGPKGGTGDPGRPGEPGL---PGARGLTGRPGDAGAQGKVGATGAPGEDGRPGPPGPLGARGQPGVMGFPGPKGANGEPG 549
BLAST of Collagen F-8 vs. Ensembl Zebrafish
Match: col11a1a (collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]) HSP 1 Score: 135.961 bits (341), Expect = 2.563e-31 Identity = 66/239 (27.62%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 ++ ++S+++ L++++ ++ P+G+++NPAR C+D+ L++P+ G ++IDPN G DS +V C F +TC+ K+S+ ++S+ K E P W+ + +D GN + M Q+ FL++L A Q +T C+++ ++D+ ++D A+ ND I + +K+ + D C R + + +I+ K + +PIVD++ DFG+ NQK Sbjct: 1583 MEDIFSSLNNLKQDIERMKYPMGTQNNPARSCKDLQLAHPEFPDGEYYIDPNQGCSGDSFKVYCNFTAGG-ETCIFPDKKSNGVRISSWPK-EVPGSWFSEFKRGKILSYVDAEGNSIN------MVQMTFLKLLTASARQNLTYSCHQSVAWHDATTDSYDRALHFLGSNDEEISYDNNPYIKA----------LSDGCAVR-KGYGKTVLEINTPKIDQVPIVDVKFTDFGDPNQKF 1802 HSP 2 Score: 93.9745 bits (232), Expect = 1.516e-18 Identity = 66/246 (26.83%), Postives = 100/246 (40.65%), Query Frame = 2 Query: 263 VLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS---MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTRE----IDE--ILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLH-DIMMNQQPDDSNT 955 +F L S+ + H R D+L+ ++ P ++ +G C+ Y + A L + +F FSIL T K + S+ + G L ++GR V + + G ++ L D WHRV +SV + + VDC+ PL R ID I V G L + + G IQ L IV +AAY CE Y+ DC H D + Q+P + T Sbjct: 20 TVFKLITVSLVLVLQAPHVRAEPV-DVLKVLEFPTVPEGVEKTSGFCTNRRASQPDAAYKISKNAQLSAPTKQLFPDGVFPEDFSILTTIKPKAGIQSFLLSIYNEKGVQQLGVEVGRSPVFLYEDQEGKPAPEDYPLFRALNLADGKWHRVGISVEKKTVTIVVDCKKKLTKPLGRSDHASIDTKGITVFGTRILDEESFEGDIQQLLIVADPKAAYDYCEHYSPDCDVPHKDTLQAQEPGEEYT 264 HSP 3 Score: 54.299 bits (129), Expect = 1.763e-6 Identity = 41/96 (42.71%), Postives = 51/96 (53.12%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G+ GP G G +GP GE GP G G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP G G RG RG G G + Sbjct: 816 GEDGPEGPKGRAGPNGESGPQGSAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGGRGVAGKAGPRGQRGPTGPRGARGARGPTGKPGPK 911 HSP 4 Score: 53.5286 bits (127), Expect = 2.777e-6 Identity = 48/125 (38.40%), Postives = 63/125 (50.40%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGER------------------GSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G+PG+ G GE G++G G G IG PG G G+DG R G +G +G G+ G G G DG G KG GP G G +G+ G +G G+PG PG G +G +G+ Sbjct: 738 GPPGHPGKEGPPGEKGALGQPGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGEDGPEGPKGRAGPNGESGPQGSAGEKGKLGVPGLPGYPGRQGPKGS 862 HSP 5 Score: 52.7582 bits (125), Expect = 4.965e-6 Identity = 50/120 (41.67%), Postives = 57/120 (47.50%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPT------------GLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 QGP GYPG RG G G G G G +G G G+ G G RG G GP G G +G SG G+ G KG +G G PG G G +G G PG PG NG KG +G Sbjct: 761 QGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGELGLAGPRGEDGPEGPKGRAGPNGESGPQGSAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGGRGV 880
BLAST of Collagen F-8 vs. Ensembl Zebrafish
Match: col2a1a (collagen, type II, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-980526-192]) HSP 1 Score: 135.576 bits (340), Expect = 2.727e-31 Identity = 71/270 (26.30%), Postives = 126/270 (46.67%), Query Frame = 2 Query: 4259 TRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILD-------QNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 + F ++ E+G D L + ++ + ++ + + + + I+ P GS+ NPAR CRD+ L +P+ SG++W+DPNLGS D+I+V C E+ +TCV + + K++ + W E ++ +G++ QL FL++L T+A QT+T C + Y D N AI ++ N D ++++E S ++D C + + +KT LPI+DI D G +Q+ Sbjct: 1225 SAFAGLSQPEKGPDPLRYMRADEASSSLRQHDVEVDATLKSINGQIEDIRSPDGSRKNPARSCRDLKLCHPEWKSGDYWVDPNLGSAADAIKVFCNM--ETGETCVKPSTPKIPRKNWWTSKSKAQKHVWFGESMNGGFHFSYADGSQTPSTTTI---QLNFLRLLSTEATQTITYHCKNSVAYMDQATGNLKKAILLQGSN--------DVEIRAEGNSRFTYGVLEDGCKKHTGQWAKTVIEYKTQKTSRLPIMDIAPMDIGGADQEF 1481 HSP 2 Score: 56.6102 bits (135), Expect = 3.392e-7 Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPG 2692 G PG RG G+ G +G G G G PG+ G PG+ GE+G G +G +G PG G SG G G G GP+G GA+G G GF G G Sbjct: 817 GAPGARGAPGDRGEIGAPGPAGFAGPPGADGQPGNKGEQGESGQKGDSGAPGPQGPSGAPGPVGPTGVTGPKGARGAQGAPGATGFPGAAG 907 HSP 3 Score: 53.9138 bits (128), Expect = 2.357e-6 Identity = 53/117 (45.30%), Postives = 59/117 (50.43%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIG---------YRGFDGIPGPPGPNGAKGEQG 2728 + GP G PGERG G G G GL G+ GAPG G PG G +G G G G+PG G G+ G PG GA G G GA G G RG G+ G PGP GA GE G Sbjct: 503 SAGPLGPPGERGAPGNRGFPGQDGLAGAKGAPGDRGVPGLSGPKGGTGDPGRPGEPGLPGARGLTGRPGDAGAQGKVGATGAPGEDGRPGPPGPLGARGQPGVMGFPGPKGANGEPG 619 HSP 4 Score: 53.9138 bits (128), Expect = 2.500e-6 Identity = 40/81 (49.38%), Postives = 45/81 (55.56%), Query Frame = 2 Query: 2429 GERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYR 2671 GERGE G+PG G GL G GAPG G PG G G G+ GPTG G+ G G G G +G GPRG PG G G + Sbjct: 655 GERGEQGQPGPSGFQGLPGPTGAPGEPGKPGDQGVPGEGGAAGPTGPRGERGFPGERGGAGPQGLQGPRGLPGTPGTDGPK 735 HSP 5 Score: 52.373 bits (124), Expect = 7.231e-6 Identity = 44/91 (48.35%), Postives = 49/91 (53.85%), Query Frame = 2 Query: 2459 SVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 + G TG IGSIGAPG+ G PG GE G+ G G G PG DG G G G G G G PG +G G G G G GP GA+G QG Sbjct: 806 AKGETGPIGSIGAPGARGAPGDRGEIGAPGPAGFAGPPGADGQPGNKGEQGESGQKGDSGAPGPQGPSGAPGPVGPTGVTGPKGARGAQGA 896
BLAST of Collagen F-8 vs. Ensembl Zebrafish
Match: col5a1 (procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-041105-6]) HSP 1 Score: 135.576 bits (340), Expect = 3.379e-31 Identity = 75/275 (27.27%), Postives = 131/275 (47.64%), Query Frame = 2 Query: 4244 YVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 Y ++ R KR + D+ + +G +++++ +++ L+ + ++ P+G++SNPAR C+D+ L +P G +WIDPN G DS +V C F ++C+ K+S LTS+ K ENP W+ L +D GN + + Q+ FL++L A Q +T C ++ ++D ++D AIR ND + + +++ V D C + + + +I+ K E +P VDI DFG QK Sbjct: 1749 YQSSPKRAKRNIDASQVMDEATDANYKDYEDG----MEEIFGSLNSLKLEIEQMKHPLGTESNPARTCKDLQLCHPDFPDGEYWIDPNQGCSRDSFKVYCNFTAGG-ESCIFPDKKSEGARLTSWPK-ENPGTWFSEYKRGKLLSYVDAEGNAIGVV------QMTFLRLLSATARQNLTYNCYQSVAWHDQDQDSYDKAIRFLGSNDEEMSYDNNPYIRA----------VVDGCALK-KGYEKTILEINTPKVEQVPFVDIMFNDFGGATQKF 2000 HSP 2 Score: 96.2857 bits (238), Expect = 3.281e-19 Identity = 67/223 (30.04%), Postives = 98/223 (43.95%), Query Frame = 2 Query: 338 DILQFIKIAQRPF-IQTQTGMC----SMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVL----HFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTRE----IDE--ILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQP--DDSNT 955 D+L+ + P + TG C S G + Y V +A L + ++ + FSIL T + + S + SV + G L ++GR V H +PG + L D WHRVA+SV +I L +DC+ L+R ID I+V G L + + G IQ L IV AA+ CE Y+ DC ++ +QP D NT Sbjct: 5 DLLKILDFHSLPDGVTKTTGFCTHRKSSKGPDVAYRVTKDAQLSAPTKQLYPSSMFPEDFSILATVRPKKGSQSFLLSVYNEQGIQQLGLEVGRSPVFLYEDHLGKPGPEDYPLFRGINLADGKWHRVAISVHKQSITLILDCKKKVTRTLSRSPHPIIDTKGIVVFGTRILDEEVFEGDIQQLMIVSDHRAAFDYCEHYSPDC----EVSAPEQPQNQDPNT 223 HSP 3 Score: 69.3218 bits (168), Expect = 5.025e-11 Identity = 52/110 (47.27%), Postives = 64/110 (58.18%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGD---PGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G+PG+ G +GE G++GP G G IG PG G G+DG RG G++G G+ PG G G+ G+ G GA GPRG G G G G G PGP GP G KG+ G Sbjct: 931 GPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPGDPGPLGPLGEKGKLGV 1040 HSP 4 Score: 62.7734 bits (151), Expect = 4.774e-9 Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTG---DRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGE 4090 GK+GP GE G GP G QGP G RG+KG G++G+KG +G +G G G KG++G G +G +G GP+G GP G +G GL G+ Sbjct: 937 GKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPGD 1025 HSP 5 Score: 62.3882 bits (150), Expect = 6.145e-9 Identity = 52/105 (49.52%), Postives = 59/105 (56.19%), Query Frame = 2 Query: 2417 SGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTP------GARGNIGYRGFDGIPGPPGPNGA 2713 SG GE GE+G G GP G G G PG G PGSDG RG G GP GD G DGL+G+ G G +G GP+G P G RG+ G G G+PG PGP G Sbjct: 750 SGLKGESGESGPQGPRGPMGSAGPTGKPGRRGRPGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGETGPQGPPGPSGEDGERGDDGEVGPRGLPGEPGPRGV 854 HSP 6 Score: 58.5362 bits (140), Expect = 9.551e-8 Identity = 61/154 (39.61%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 3029 QGPNGPIGSPGLPGIQGSPGVPG---------DMGEHGPPG---------FKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGE---VGVPGLPGLQGEPGTK 3427 +GP G G PG+PG G PG PG ++G HGP G KG +G RG GN G++G G PG G G KGD+G+ G G G G +GP G G G+ GP+GP+GE +GVPGLPG G G K Sbjct: 915 KGPTGKPGLPGMPGADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPGFKGDMGVKGDKGELGAAGPRGED---------------GPEGPKGRSGLPGDPGPLGPLGEKGKLGVPGLPGYPGRQGPK 1053 HSP 7 Score: 57.3806 bits (137), Expect = 2.350e-7 Identity = 48/110 (43.64%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGA---PGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QGP GYPG RG G G G G G G PG GD G G++G +G+ GP G+ G +G G G PG G +GP G +G +G G G PG GP G++G QG Sbjct: 954 QGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPKGRSGLPGDPGPLGPLGE---KGKLGVPGLPGYPGRQGPKGSQGFQG 1060 HSP 8 Score: 55.4546 bits (132), Expect = 8.166e-7 Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G+ G G+PG GP GE+G G G+ G G QG KG +G +G QG G KG G++GK GP G+ GP G G RG RG G AG + Sbjct: 1018 GRSGLPGDPGPLGPLGEKGKLGVPGLPGYPGRQGPKGSQGFQGFQGTSGEKGTRGTAGKPGPRGQRGPTGPRGERGPRGPTGKAGPK 1104 HSP 9 Score: 52.7582 bits (125), Expect = 5.609e-6 Identity = 41/90 (45.56%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGI---QGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G GP G PG GP GE+G G G +G +G +G+KG +GVRG +G +G KGE G G +G MG G KG +G G RG+ G G + Sbjct: 928 GADGPPGHPGKEGPSGEKGNLGPHGPQGPIGYPGPRGVKGADGVRGLKGNKGEKGEDGFPGFKGDMGVKGDKGELGAAGPRGEDGPEGPK 1017
BLAST of Collagen F-8 vs. Ensembl Xenopus
Match: COL11A1 (collagen, type V, alpha 3 [Source:NCBI gene;Acc:733808]) HSP 1 Score: 150.984 bits (380), Expect = 1.126e-35 Identity = 73/239 (30.54%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ ++ L++++ S++ PIGS+SNPAR C+D+ L +P++ G +WIDPN G DS +V C F +TC++ K+S ++S+ K ENP W+ L +D GN + ++ Q+ FL++L A Q T C ++ +YDS+ K++D A+R ND I ++ + D C + + + +I+ K + LPI D+ + DFG+ NQK Sbjct: 1542 MEEIFGSLTSLKQDIESMKFPIGSQSNPARTCKDLQLCHPELPDGEYWIDPNQGCSGDSFKVYCNFTAGG-ETCINPDKKSEGVRISSWPK-ENPGSWFSEFKRGKLLSYVDIQGNAINQV------QMTFLKLLSQSARQNFTYTCQQSVAWYDSVGKHYDKALRFLGSNDEEISYDNSPYIRP----------LHDGCALK-KGFARTVLEINTLKIDQLPIADVMISDFGDQNQKF 1761 HSP 2 Score: 93.2041 bits (230), Expect = 3.743e-18 Identity = 55/228 (24.12%), Postives = 94/228 (41.23%), Query Frame = 2 Query: 266 LFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQG------YTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 L SL + ++T + R + D+L+ ++ P + G C+ GS + V A L + + +F FS+LLT K + + S+ + L +IG + + + G ++ + D WHRVA+SV + + VDC+ +PL R I+ + + + G + G IQ L I +AAY CE + DC Sbjct: 19 LSSLVLITLTFLYQAAEVRGAGPVDVLKSLEFHSLPEGVSKTAGFCTNRRAAKGSDTAFRVQKHAQLSIPTKKLFPGGVFPKDFSVLLTVKPKKGLQSFLLSIYNDQKVQQLGVEIGSSPIFQYEDHNGKPAPKDYPMFSSVNIADGKWHRVAISVEKKTVTIIVDCKKKATLPLPRSDKPIVYTNGIVVFGTSLLEEDVFEGDIQQLLISDDSKAAYDYCEHFMPDC 246 HSP 3 Score: 57.3806 bits (137), Expect = 2.852e-7 Identity = 45/97 (46.39%), Postives = 54/97 (55.67%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGE---DGPKGAIGPRGQRGDPGLAG 4087 G+ GP G G SGP GE GPTG G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP+GA GPRG G PG G Sbjct: 774 GEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGPRGARGPRGPTGKPGPKG 870 HSP 4 Score: 57.3806 bits (137), Expect = 3.000e-7 Identity = 48/103 (46.60%), Postives = 52/103 (50.49%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G G G GEPG G G+ PG G PG G G G +GP G PG GL+G DG PG G GP G GA G G +G G PGP G GA G Sbjct: 639 GPQGPKGNMGPQGEPGPAGQQGI------PGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADG 735 HSP 5 Score: 56.9954 bits (136), Expect = 3.797e-7 Identity = 49/127 (38.58%), Postives = 58/127 (45.67%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGER------------------------GSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G+PG+ G GE G++GPTG G IG PG G G+DG R G G GP G G+DG G G G G GP G G +G +G G G PG GP G+ G Sbjct: 696 GPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTG 822 HSP 6 Score: 56.6102 bits (135), Expect = 5.834e-7 Identity = 51/122 (41.80%), Postives = 59/122 (48.36%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDG---------------NPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QG G PGE+G G+PG G G G G PG G PG G G G +GP G PG G+ G DG PG KG +G +G G G +G RG DG GP G +G GE G Sbjct: 671 QGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESG 792 HSP 7 Score: 54.6842 bits (130), Expect = 1.849e-6 Identity = 49/109 (44.95%), Postives = 54/109 (49.54%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 N GP G PG G+ G PG G G GSIG PG G G G G G+ GP G PGK +G PG KGA+GP G +G IGY PGP G KG G Sbjct: 646 NMGPQGEPGPAGQQGIPGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGK------EGPPGEKGALGPT---GPQGPIGY---------PGPRGVKGADGV 736 HSP 8 Score: 54.6842 bits (130), Expect = 2.012e-6 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQG---PTGDRGIKGGVGIQGMKGVEGVR---------------GPQGPQGLKGEIGSSGKEGPMGEDGP---KGAIGPRGQRGDPGLAGER 4093 G GP G PG GP GE+G PTG +G G G +G+KG +GVR G +G GLKG+ G G GP GEDGP KG GP G+ G GLAGE+ Sbjct: 692 AGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEK 800 HSP 9 Score: 53.1434 bits (126), Expect = 5.714e-6 Identity = 43/87 (49.43%), Postives = 49/87 (56.32%), Query Frame = 2 Query: 2447 GEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPN 2707 G PG +G TG G +GAPG+ G G G+ G G RG G G G SG G GA GA RG PG G+ G RGFDG+PG PG Sbjct: 495 GPPGPMGLTGRSGPVGAPGAAGIKGDPGDPGPQGPRGIQGTLGSMGKSGKRGRSGADGA---RGMPGEPGSKGDRGFDGLPGLPGEK 578 HSP 10 Score: 52.373 bits (124), Expect = 9.470e-6 Identity = 43/95 (45.26%), Postives = 49/95 (51.58%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G +GE G G G G +G PG G PG G +GS G G G G+ G G+ G PG +G GP G GARG RG G PGP Sbjct: 777 GPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGPRGARGP---RGPTGKPGP 868
BLAST of Collagen F-8 vs. Ensembl Xenopus
Match: COL11A1 (collagen, type V, alpha 3 [Source:NCBI gene;Acc:733808]) HSP 1 Score: 150.599 bits (379), Expect = 1.189e-35 Identity = 73/239 (30.54%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ ++ L++++ S++ PIGS+SNPAR C+D+ L +P++ G +WIDPN G DS +V C F +TC++ K+S ++S+ K ENP W+ L +D GN + ++ Q+ FL++L A Q T C ++ +YDS+ K++D A+R ND I ++ + D C + + + +I+ K + LPI D+ + DFG+ NQK Sbjct: 1553 MEEIFGSLTSLKQDIESMKFPIGSQSNPARTCKDLQLCHPELPDGEYWIDPNQGCSGDSFKVYCNFTAGG-ETCINPDKKSEGVRISSWPK-ENPGSWFSEFKRGKLLSYVDIQGNAINQV------QMTFLKLLSQSARQNFTYTCQQSVAWYDSVGKHYDKALRFLGSNDEEISYDNSPYIRP----------LHDGCALK-KGFARTVLEINTLKIDQLPIADVMISDFGDQNQKF 1772 HSP 2 Score: 93.5893 bits (231), Expect = 3.141e-18 Identity = 59/248 (23.79%), Postives = 104/248 (41.94%), Query Frame = 2 Query: 266 LFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQG------YTGVIQDLFIVPGQEAAYRQCEIYTQDCPG-LHDIMMNQQP--DDSNT 955 L SL + ++T + R + D+L+ ++ P + G C+ GS + V A L + + +F FS+LLT K + + S+ + L +IG + + + G ++ + D WHRVA+SV + + VDC+ +PL R I+ + + + G + G IQ L I +AAY CE + DC + ++ Q+P D++N Sbjct: 19 LSSLVLITLTFLYQAAEVRGAGPVDVLKSLEFHSLPEGVSKTAGFCTNRRAAKGSDTAFRVQKHAQLSIPTKKLFPGGVFPKDFSVLLTVKPKKGLQSFLLSIYNDQKVQQLGVEIGSSPIFQYEDHNGKPAPKDYPMFSSVNIADGKWHRVAISVEKKTVTIIVDCKKKATLPLPRSDKPIVYTNGIVVFGTSLLEEDVFEGDIQQLLISDDSKAAYDYCEHFMPDCDAPVPNLPQAQEPQVDEANV 266 HSP 3 Score: 57.3806 bits (137), Expect = 3.105e-7 Identity = 48/103 (46.60%), Postives = 52/103 (50.49%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G G G GEPG G G+ PG G PG G G G +GP G PG GL+G DG PG G GP G GA G G +G G PGP G GA G Sbjct: 650 GPQGPKGNMGPQGEPGPAGQQGI------PGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADG 746 HSP 4 Score: 57.3806 bits (137), Expect = 3.185e-7 Identity = 45/97 (46.39%), Postives = 54/97 (55.67%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGE---DGPKGAIGPRGQRGDPGLAG 4087 G+ GP G G SGP GE GPTG G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP+GA GPRG G PG G Sbjct: 785 GEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGPRGARGPRGPTGKPGPKG 881 HSP 5 Score: 56.9954 bits (136), Expect = 4.135e-7 Identity = 49/127 (38.58%), Postives = 58/127 (45.67%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGER------------------------GSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G+PG+ G GE G++GPTG G IG PG G G+DG R G G GP G G+DG G G G G GP G G +G +G G G PG GP G+ G Sbjct: 707 GPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTG 833 HSP 6 Score: 56.225 bits (134), Expect = 6.515e-7 Identity = 51/122 (41.80%), Postives = 59/122 (48.36%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDG---------------NPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QG G PGE+G G+PG G G G G PG G PG G G G +GP G PG G+ G DG PG KG +G +G G G +G RG DG GP G +G GE G Sbjct: 682 QGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESG 803 HSP 7 Score: 54.6842 bits (130), Expect = 2.030e-6 Identity = 49/109 (44.95%), Postives = 54/109 (49.54%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 N GP G PG G+ G PG G G GSIG PG G G G G G+ GP G PGK +G PG KGA+GP G +G IGY PGP G KG G Sbjct: 657 NMGPQGEPGPAGQQGIPGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGK------EGPPGEKGALGPT---GPQGPIGY---------PGPRGVKGADGV 747 HSP 8 Score: 54.299 bits (129), Expect = 2.304e-6 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQG---PTGDRGIKGGVGIQGMKGVEGVR---------------GPQGPQGLKGEIGSSGKEGPMGEDGP---KGAIGPRGQRGDPGLAGER 4093 G GP G PG GP GE+G PTG +G G G +G+KG +GVR G +G GLKG+ G G GP GEDGP KG GP G+ G GLAGE+ Sbjct: 703 AGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEK 811 HSP 9 Score: 53.1434 bits (126), Expect = 5.816e-6 Identity = 43/87 (49.43%), Postives = 49/87 (56.32%), Query Frame = 2 Query: 2447 GEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPN 2707 G PG +G TG G +GAPG+ G G G+ G G RG G G G SG G GA GA RG PG G+ G RGFDG+PG PG Sbjct: 506 GPPGPMGLTGRSGPVGAPGAAGIKGDPGDPGPQGPRGIQGTLGSMGKSGKRGRSGADGA---RGMPGEPGSKGDRGFDGLPGLPGEK 589
BLAST of Collagen F-8 vs. Ensembl Xenopus
Match: COL11A1 (collagen, type V, alpha 3 [Source:NCBI gene;Acc:733808]) HSP 1 Score: 150.214 bits (378), Expect = 1.540e-35 Identity = 73/239 (30.54%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ ++ L++++ S++ PIGS+SNPAR C+D+ L +P++ G +WIDPN G DS +V C F +TC++ K+S ++S+ K ENP W+ L +D GN + ++ Q+ FL++L A Q T C ++ +YDS+ K++D A+R ND I ++ + D C + + + +I+ K + LPI D+ + DFG+ NQK Sbjct: 1592 MEEIFGSLTSLKQDIESMKFPIGSQSNPARTCKDLQLCHPELPDGEYWIDPNQGCSGDSFKVYCNFTAGG-ETCINPDKKSEGVRISSWPK-ENPGSWFSEFKRGKLLSYVDIQGNAINQV------QMTFLKLLSQSARQNFTYTCQQSVAWYDSVGKHYDKALRFLGSNDEEISYDNSPYIRP----------LHDGCALK-KGFARTVLEINTLKIDQLPIADVMISDFGDQNQKF 1811 HSP 2 Score: 92.4337 bits (228), Expect = 6.693e-18 Identity = 55/228 (24.12%), Postives = 94/228 (41.23%), Query Frame = 2 Query: 266 LFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQG------YTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 L SL + ++T + R + D+L+ ++ P + G C+ GS + V A L + + +F FS+LLT K + + S+ + L +IG + + + G ++ + D WHRVA+SV + + VDC+ +PL R I+ + + + G + G IQ L I +AAY CE + DC Sbjct: 19 LSSLVLITLTFLYQAAEVRGAGPVDVLKSLEFHSLPEGVSKTAGFCTNRRAAKGSDTAFRVQKHAQLSIPTKKLFPGGVFPKDFSVLLTVKPKKGLQSFLLSIYNDQKVQQLGVEIGSSPIFQYEDHNGKPAPKDYPMFSSVNIADGKWHRVAISVEKKTVTIIVDCKKKATLPLPRSDKPIVYTNGIVVFGTSLLEEDVFEGDIQQLLISDDSKAAYDYCEHFMPDC 246 HSP 3 Score: 57.3806 bits (137), Expect = 2.792e-7 Identity = 48/103 (46.60%), Postives = 52/103 (50.49%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G G G GEPG G G+ PG G PG G G G +GP G PG GL+G DG PG G GP G GA G G +G G PGP G GA G Sbjct: 689 GPQGPKGNMGPQGEPGPAGQQGI------PGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADG 785 HSP 4 Score: 57.3806 bits (137), Expect = 3.115e-7 Identity = 45/97 (46.39%), Postives = 54/97 (55.67%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGE---DGPKGAIGPRGQRGDPGLAG 4087 G+ GP G G SGP GE GPTG G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP+GA GPRG G PG G Sbjct: 824 GEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGPRGARGPRGPTGKPGPKG 920 HSP 5 Score: 57.3806 bits (137), Expect = 3.417e-7 Identity = 49/127 (38.58%), Postives = 58/127 (45.67%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGER------------------------GSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G+PG+ G GE G++GPTG G IG PG G G+DG R G G GP G G+DG G G G G GP G G +G +G G G PG GP G+ G Sbjct: 746 GPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTG 872 HSP 6 Score: 56.6102 bits (135), Expect = 5.476e-7 Identity = 51/122 (41.80%), Postives = 59/122 (48.36%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDG---------------NPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QG G PGE+G G+PG G G G G PG G PG G G G +GP G PG G+ G DG PG KG +G +G G G +G RG DG GP G +G GE G Sbjct: 721 QGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESG 842 HSP 7 Score: 54.6842 bits (130), Expect = 1.872e-6 Identity = 49/109 (44.95%), Postives = 54/109 (49.54%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 N GP G PG G+ G PG G G GSIG PG G G G G G+ GP G PGK +G PG KGA+GP G +G IGY PGP G KG G Sbjct: 696 NMGPQGEPGPAGQQGIPGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGK------EGPPGEKGALGPT---GPQGPIGY---------PGPRGVKGADGV 786 HSP 8 Score: 54.6842 bits (130), Expect = 2.036e-6 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQG---PTGDRGIKGGVGIQGMKGVEGVR---------------GPQGPQGLKGEIGSSGKEGPMGEDGP---KGAIGPRGQRGDPGLAGER 4093 G GP G PG GP GE+G PTG +G G G +G+KG +GVR G +G GLKG+ G G GP GEDGP KG GP G+ G GLAGE+ Sbjct: 742 AGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEK 850 HSP 9 Score: 53.5286 bits (127), Expect = 4.929e-6 Identity = 43/87 (49.43%), Postives = 49/87 (56.32%), Query Frame = 2 Query: 2447 GEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPN 2707 G PG +G TG G +GAPG+ G G G+ G G RG G G G SG G GA GA RG PG G+ G RGFDG+PG PG Sbjct: 545 GPPGPMGLTGRSGPVGAPGAAGIKGDPGDPGPQGPRGIQGTLGSMGKSGKRGRSGADGA---RGMPGEPGSKGDRGFDGLPGLPGEK 628 HSP 10 Score: 52.373 bits (124), Expect = 9.913e-6 Identity = 43/95 (45.26%), Postives = 49/95 (51.58%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G +GE G G G G +G PG G PG G +GS G G G G+ G G+ G PG +G GP G GARG RG G PGP Sbjct: 827 GPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGPRGARGP---RGPTGKPGP 918
BLAST of Collagen F-8 vs. Ensembl Xenopus
Match: COL11A1 (collagen, type V, alpha 3 [Source:NCBI gene;Acc:733808]) HSP 1 Score: 150.214 bits (378), Expect = 1.571e-35 Identity = 73/239 (30.54%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ ++ L++++ S++ PIGS+SNPAR C+D+ L +P++ G +WIDPN G DS +V C F +TC++ K+S ++S+ K ENP W+ L +D GN + ++ Q+ FL++L A Q T C ++ +YDS+ K++D A+R ND I ++ + D C + + + +I+ K + LPI D+ + DFG+ NQK Sbjct: 1603 MEEIFGSLTSLKQDIESMKFPIGSQSNPARTCKDLQLCHPELPDGEYWIDPNQGCSGDSFKVYCNFTAGG-ETCINPDKKSEGVRISSWPK-ENPGSWFSEFKRGKLLSYVDIQGNAINQV------QMTFLKLLSQSARQNFTYTCQQSVAWYDSVGKHYDKALRFLGSNDEEISYDNSPYIRP----------LHDGCALK-KGFARTVLEINTLKIDQLPIADVMISDFGDQNQKF 1822 HSP 2 Score: 92.8189 bits (229), Expect = 4.666e-18 Identity = 55/228 (24.12%), Postives = 94/228 (41.23%), Query Frame = 2 Query: 266 LFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQG------YTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 L SL + ++T + R + D+L+ ++ P + G C+ GS + V A L + + +F FS+LLT K + + S+ + L +IG + + + G ++ + D WHRVA+SV + + VDC+ +PL R I+ + + + G + G IQ L I +AAY CE + DC Sbjct: 19 LSSLVLITLTFLYQAAEVRGAGPVDVLKSLEFHSLPEGVSKTAGFCTNRRAAKGSDTAFRVQKHAQLSIPTKKLFPGGVFPKDFSVLLTVKPKKGLQSFLLSIYNDQKVQQLGVEIGSSPIFQYEDHNGKPAPKDYPMFSSVNIADGKWHRVAISVEKKTVTIIVDCKKKATLPLPRSDKPIVYTNGIVVFGTSLLEEDVFEGDIQQLLISDDSKAAYDYCEHFMPDC 246 HSP 3 Score: 57.7658 bits (138), Expect = 2.382e-7 Identity = 48/103 (46.60%), Postives = 52/103 (50.49%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G G G GEPG G G+ PG G PG G G G +GP G PG GL+G DG PG G GP G GA G G +G G PGP G GA G Sbjct: 700 GPQGPKGNMGPQGEPGPAGQQGI------PGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADG 796 HSP 4 Score: 57.7658 bits (138), Expect = 2.613e-7 Identity = 45/97 (46.39%), Postives = 54/97 (55.67%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGE---DGPKGAIGPRGQRGDPGLAG 4087 G+ GP G G SGP GE GPTG G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP+GA GPRG G PG G Sbjct: 835 GEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGPRGARGPRGPTGKPGPKG 931 HSP 5 Score: 57.3806 bits (137), Expect = 2.964e-7 Identity = 49/127 (38.58%), Postives = 58/127 (45.67%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGER------------------------GSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G+PG+ G GE G++GPTG G IG PG G G+DG R G G GP G G+DG G G G G GP G G +G +G G G PG GP G+ G Sbjct: 757 GPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTG 883 HSP 6 Score: 56.6102 bits (135), Expect = 4.790e-7 Identity = 51/122 (41.80%), Postives = 59/122 (48.36%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDG---------------NPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QG G PGE+G G+PG G G G G PG G PG G G G +GP G PG G+ G DG PG KG +G +G G G +G RG DG GP G +G GE G Sbjct: 732 QGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESG 853 HSP 7 Score: 55.0694 bits (131), Expect = 1.693e-6 Identity = 49/109 (44.95%), Postives = 54/109 (49.54%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 N GP G PG G+ G PG G G GSIG PG G G G G G+ GP G PGK +G PG KGA+GP G +G IGY PGP G KG G Sbjct: 707 NMGPQGEPGPAGQQGIPGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGK------EGPPGEKGALGPT---GPQGPIGY---------PGPRGVKGADGV 797 HSP 8 Score: 54.6842 bits (130), Expect = 1.811e-6 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQG---PTGDRGIKGGVGIQGMKGVEGVR---------------GPQGPQGLKGEIGSSGKEGPMGEDGP---KGAIGPRGQRGDPGLAGER 4093 G GP G PG GP GE+G PTG +G G G +G+KG +GVR G +G GLKG+ G G GP GEDGP KG GP G+ G GLAGE+ Sbjct: 753 AGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEK 861 HSP 9 Score: 53.5286 bits (127), Expect = 4.459e-6 Identity = 43/87 (49.43%), Postives = 49/87 (56.32%), Query Frame = 2 Query: 2447 GEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPN 2707 G PG +G TG G +GAPG+ G G G+ G G RG G G G SG G GA GA RG PG G+ G RGFDG+PG PG Sbjct: 556 GPPGPMGLTGRSGPVGAPGAAGIKGDPGDPGPQGPRGIQGTLGSMGKSGKRGRSGADGA---RGMPGEPGSKGDRGFDGLPGLPGEK 639 HSP 10 Score: 52.7582 bits (125), Expect = 8.313e-6 Identity = 43/95 (45.26%), Postives = 49/95 (51.58%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G +GE G G G G +G PG G PG G +GS G G G G+ G G+ G PG +G GP G GARG RG G PGP Sbjct: 838 GPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGPRGARGP---RGPTGKPGP 929
BLAST of Collagen F-8 vs. Ensembl Xenopus
Match: COL11A1 (collagen, type V, alpha 3 [Source:NCBI gene;Acc:733808]) HSP 1 Score: 149.828 bits (377), Expect = 2.156e-35 Identity = 73/239 (30.54%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ ++ L++++ S++ PIGS+SNPAR C+D+ L +P++ G +WIDPN G DS +V C F +TC++ K+S ++S+ K ENP W+ L +D GN + ++ Q+ FL++L A Q T C ++ +YDS+ K++D A+R ND I ++ + D C + + + +I+ K + LPI D+ + DFG+ NQK Sbjct: 1642 MEEIFGSLTSLKQDIESMKFPIGSQSNPARTCKDLQLCHPELPDGEYWIDPNQGCSGDSFKVYCNFTAGG-ETCINPDKKSEGVRISSWPK-ENPGSWFSEFKRGKLLSYVDIQGNAINQV------QMTFLKLLSQSARQNFTYTCQQSVAWYDSVGKHYDKALRFLGSNDEEISYDNSPYIRP----------LHDGCALK-KGFARTVLEINTLKIDQLPIADVMISDFGDQNQKF 1861 HSP 2 Score: 92.4337 bits (228), Expect = 6.303e-18 Identity = 55/228 (24.12%), Postives = 94/228 (41.23%), Query Frame = 2 Query: 266 LFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQG------YTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 L SL + ++T + R + D+L+ ++ P + G C+ GS + V A L + + +F FS+LLT K + + S+ + L +IG + + + G ++ + D WHRVA+SV + + VDC+ +PL R I+ + + + G + G IQ L I +AAY CE + DC Sbjct: 19 LSSLVLITLTFLYQAAEVRGAGPVDVLKSLEFHSLPEGVSKTAGFCTNRRAAKGSDTAFRVQKHAQLSIPTKKLFPGGVFPKDFSVLLTVKPKKGLQSFLLSIYNDQKVQQLGVEIGSSPIFQYEDHNGKPAPKDYPMFSSVNIADGKWHRVAISVEKKTVTIIVDCKKKATLPLPRSDKPIVYTNGIVVFGTSLLEEDVFEGDIQQLLISDDSKAAYDYCEHFMPDC 246 HSP 3 Score: 57.7658 bits (138), Expect = 2.105e-7 Identity = 48/103 (46.60%), Postives = 52/103 (50.49%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G G G GEPG G G+ PG G PG G G G +GP G PG GL+G DG PG G GP G GA G G +G G PGP G GA G Sbjct: 739 GPQGPKGNMGPQGEPGPAGQQGI------PGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADG 835 HSP 4 Score: 57.7658 bits (138), Expect = 2.310e-7 Identity = 45/97 (46.39%), Postives = 54/97 (55.67%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGE---DGPKGAIGPRGQRGDPGLAG 4087 G+ GP G G SGP GE GPTG G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP+GA GPRG G PG G Sbjct: 874 GEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGPRGARGPRGPTGKPGPKG 970 HSP 5 Score: 57.7658 bits (138), Expect = 2.620e-7 Identity = 49/127 (38.58%), Postives = 58/127 (45.67%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGER------------------------GSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 GP G+PG+ G GE G++GPTG G IG PG G G+DG R G G GP G G+DG G G G G GP G G +G +G G G PG GP G+ G Sbjct: 796 GPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTG 922 HSP 6 Score: 56.9954 bits (136), Expect = 4.306e-7 Identity = 51/122 (41.80%), Postives = 59/122 (48.36%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDG---------------NPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QG G PGE+G G+PG G G G G PG G PG G G G +GP G PG G+ G DG PG KG +G +G G G +G RG DG GP G +G GE G Sbjct: 771 QGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESG 892 HSP 7 Score: 55.0694 bits (131), Expect = 1.484e-6 Identity = 49/109 (44.95%), Postives = 54/109 (49.54%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 N GP G PG G+ G PG G G GSIG PG G G G G G+ GP G PGK +G PG KGA+GP G +G IGY PGP G KG G Sbjct: 746 NMGPQGEPGPAGQQGIPGPQGLPGPQGSIGPPGEKGPQGKPGLPGLAGADGPPGHPGK------EGPPGEKGALGPT---GPQGPIGY---------PGPRGVKGADGV 836 HSP 8 Score: 55.0694 bits (131), Expect = 1.588e-6 Identity = 49/109 (44.95%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQG---PTGDRGIKGGVGIQGMKGVEGVR---------------GPQGPQGLKGEIGSSGKEGPMGEDGP---KGAIGPRGQRGDPGLAGER 4093 G GP G PG GP GE+G PTG +G G G +G+KG +GVR G +G GLKG+ G G GP GEDGP KG GP G+ G GLAGE+ Sbjct: 792 AGADGPPGHPGKEGPPGEKGALGPTGPQGPIGYPGPRGVKGADGVRGLKGGKGEKGEDGFPGFKGDMGLKGDRGEVGPLGPRGEDGPEGPKGRSGPSGESGPTGLAGEK 900 HSP 9 Score: 53.9138 bits (128), Expect = 3.842e-6 Identity = 43/87 (49.43%), Postives = 49/87 (56.32%), Query Frame = 2 Query: 2447 GEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPN 2707 G PG +G TG G +GAPG+ G G G+ G G RG G G G SG G GA GA RG PG G+ G RGFDG+PG PG Sbjct: 595 GPPGPMGLTGRSGPVGAPGAAGIKGDPGDPGPQGPRGIQGTLGSMGKSGKRGRSGADGA---RGMPGEPGSKGDRGFDGLPGLPGEK 678 HSP 10 Score: 52.7582 bits (125), Expect = 7.346e-6 Identity = 43/95 (45.26%), Postives = 49/95 (51.58%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G +GE G G G G +G PG G PG G +GS G G G G+ G G+ G PG +G GP G GARG RG G PGP Sbjct: 877 GPEGPKGRSGPSGESGPTGLAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFAGANGEKGARGVAGKPGPRGQRGPTGPRGARGP---RGPTGKPGP 968
BLAST of Collagen F-8 vs. Ensembl Mouse
Match: Col11a1 (collagen, type XI, alpha 1 [Source:MGI Symbol;Acc:MGI:88446]) HSP 1 Score: 146.362 bits (368), Expect = 1.702e-34 Identity = 70/239 (29.29%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L++++ ++ P+G+++NPAR C+D+ LS+P G +WIDPN G DS +V C F +TC+ K+S ++S+ K E P W+ L LD GN + M Q+ FL++L A Q T C+++A +YD ++ ++D A+R ND + + +K+ + D C R + + +I+ K + +PI+D+ + DFG+ NQK Sbjct: 1574 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTAGG-ETCIYPDKKSEGVRISSWPK-EKPGSWYSEFKRGKLLSYLDVEGNSIN------MVQMTFLKLLTASARQNFTYNCHQSAAWYDVLSGSYDKALRFLGSNDEEMSYENNPHIKA----------LYDGCASR-KGYEKTVIEINTPKIDQVPIIDVMINDFGDQNQKF 1793 HSP 2 Score: 94.7449 bits (234), Expect = 1.090e-18 Identity = 61/254 (24.02%), Postives = 102/254 (40.16%), Query Frame = 2 Query: 224 IKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQP 940 ++P + + +++ ++T R ++ DIL+ + P I TG C+ + Y V EA + + +F FSIL T K + + + S+ + +G L ++GR V F + G + + D WHRVA+SV + + VDC+ PL R + + I+V G L + G IQ I +AAY C+ Y+ DC Q+P Sbjct: 1 MEPWSRWKTKRWIWDLTISTLALTFLFQAREVRGAAPVDILKALDFHNSPVGISKTTGFCTNRKNSKDPDVAYRVTEEAQISAPTKQLFPGGIFPQDFSILFTIKPKKGTQAFLLSLYNEHGIQQLGVEVGRSPVFLFEDHTGKPTPENYPLFSTVNIADGKWHRVAISVEKKTVTMIVDCKKKITKPLDRSERSIVDTNGIMVFGTRILETDVFQGDIQQFLITGDPKAAYDYCDHYSPDCDLTSKAAQAQEP 254 HSP 3 Score: 58.9214 bits (141), Expect = 8.293e-8 Identity = 52/120 (43.33%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAKGAVGPRGT------PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G GE+GE G PG G GL G G G G G DG G G GPTGDPG G + G+ G PG G GP+G+ PGA G G RG G PGP G G G +G+ Sbjct: 769 RGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGS 888 HSP 4 Score: 55.0694 bits (131), Expect = 1.227e-6 Identity = 44/95 (46.32%), Postives = 50/95 (52.63%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G TG+PG G G G +G PG G PG G +GS G G G G+ G GI G PG +G GP G RG+ G RG G PGP Sbjct: 809 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTG---PRGSRGARGPTGKPGP 900 HSP 5 Score: 53.9138 bits (128), Expect = 2.447e-6 Identity = 44/92 (47.83%), Postives = 50/92 (54.35%), Query Frame = 2 Query: 3827 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAI---GPRGQRGDPGLAGER 4093 +G+ GP GE G GP+G GPTGD G G G +G GV G+ G G QG KG G G G GE G +G GPRGQRG G G R Sbjct: 798 EVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSR 889 HSP 6 Score: 53.1434 bits (126), Expect = 4.679e-6 Identity = 40/96 (41.67%), Postives = 52/96 (54.17%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G+ GP G G +GP G+ GP+G G KG +G+ G+ G G +GP+G G KG G +GK GP G+ GP G G RG RG G G + Sbjct: 806 GEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPK 901 HSP 7 Score: 52.7582 bits (125), Expect = 5.399e-6 Identity = 49/125 (39.20%), Postives = 63/125 (50.40%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGS---RGPTGDPGKD---------------GLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP------PGPNGAKGE 2722 G PGE+G G G G G +G G G G PG DG++G IG +G GD G++ G++G DG PG +G +G G +G+ G RGF G+PGP PGP G KGE Sbjct: 1088 GAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQ---QGMFGQKGDEGARGFPGLPGPIGLQGLPGPPGEKGE 1209
BLAST of Collagen F-8 vs. Ensembl Mouse
Match: Col5a1 (collagen, type V, alpha 1 [Source:MGI Symbol;Acc:MGI:88457]) HSP 1 Score: 138.272 bits (347), Expect = 5.233e-32 Identity = 70/239 (29.29%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L+ + ++RP+G++ NPAR C+D+ L +P G +W+DPN G DS +V C F TCV K+S +TS+ K ENP W+ L +D GN + + Q+ FL++L A Q VT C ++ + D+ ++D AIR ND + + +++ + D C + + + +I K E +PIVDI DFG +QK Sbjct: 1608 MEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGG-STCVFPDKKSEGARITSWPK-ENPGSWFSEFKRGKLLSYVDAEGNPVGVV------QMTFLRLLSASAHQNVTYNCYQSVAWQDAATGSYDKAIRFLGSNDEEMSYDNNPYIRA----------LVDGCATK-KGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKF 1827 HSP 2 Score: 94.7449 bits (234), Expect = 1.060e-18 Identity = 60/225 (26.67%), Postives = 97/225 (43.11%), Query Frame = 2 Query: 317 NRTSSHGDILQFIKIAQRPF-IQTQTGMCSMPGSK----LGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFK----TQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDC-PGLHDIMMNQQPD 943 +R + D+L+ + P + TG C+ S + Y V +A L + + ++ FSIL T K + S + S+ + G L ++GR V + + G E+ L D WHR+ALSV + L +DC+ L+R + + I++ G L + + G IQ L V AAY CE Y+ DC + D +Q P+ Sbjct: 34 SRAAQPADLLEMLDFHNLPSGVTKTTGFCATRRSSSEPDVAYRVSKDAQLSMPTKQLYPESGFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQLGLELGRSPVFLYEDHTGKPGPEEYPLFPGINLSDGKWHRIALSVYKKNVTLILDCKKKITKFLSRSDHPIIDTNGIVMFGSRILDDEIFEGDIQQLLFVSDNRAAYDYCEHYSPDCDTAVPDTPQSQDPN 258 HSP 3 Score: 59.6918 bits (143), Expect = 4.170e-8 Identity = 46/95 (48.42%), Postives = 51/95 (53.68%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G G+PG +GPTG G +G PG G PG G +GSIG G PG +G G G PG G G RG G RG G RG G PGP Sbjct: 841 GPEGPKGRGGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGF---PGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGP 932 HSP 4 Score: 55.8398 bits (133), Expect = 6.710e-7 Identity = 93/276 (33.70%), Postives = 110/276 (39.86%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDP------------GKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGI------QGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQG 3178 N G G PG +G G PG GP G G G PG+ G PG G+ G G +G G P G G GI G G KG G G PG +G++G +G G GPPGP G G +G KG G +GD GP+G T G G G PG G+ G QGP G IG PG PG +G+PG PG G+ GP G +G G RG TG PG +G Sbjct: 725 NPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGP---------------------------------------KGRGGPNGDPGPLGPT---------------------------GEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKG 934 HSP 5 Score: 52.373 bits (124), Expect = 7.972e-6 Identity = 45/92 (48.91%), Postives = 50/92 (54.35%), Query Frame = 2 Query: 3827 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGA---IGPRGQRGDPGLAGER 4093 +G GP GE G GP+G GP GD G G G +G GV G+ G G QG KG IG G G GE G +G GPRGQRG G GER Sbjct: 830 EIGPPGPRGEDGPEGPKGRGGPNGDPGPLGPTGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPTGPRGER 921
BLAST of Collagen F-8 vs. Ensembl Mouse
Match: Col5a2 (collagen, type V, alpha 2 [Source:MGI Symbol;Acc:MGI:88458]) HSP 1 Score: 134.42 bits (337), Expect = 7.053e-31 Identity = 78/257 (30.35%), Postives = 120/257 (46.69%), Query Frame = 2 Query: 4304 LENPEIPKDTN----GIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQN-GNKMRKIKY----CPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 E+ P DTN GI LK L S I+ +++ P GSK +PAR C D+ L +P SG +WIDPN GS D+I+V C E+ +TC+SA S + K+ + + W LD N G++ Y ++Q+ FL++L +A Q +T +C Y D KN A+ ++ N D ++K E ++D C R + F+ + LPI+D+ D GN +Q+ Sbjct: 1250 TEDQAAPDDTNKTDPGIHVTLKSLSSQIE-------TMRSPDGSKKHPARTCDDLKLCHPTKQSGEYWIDPNQGSAEDAIKVYCNM--ETGETCISANPASVPRKTWWASKSPDNKPVWYG--LDMNRGSQFTYGDYQSPNTAITQMTFLRLLSKEASQNLTYICRNTVGYMDDQAKNLKKAVVLKGSN--------DLEIKGEGNIRFRYTVLQDTCSKRNGNVGKTIFEYRTQNVARLPIIDVGPVDIGNADQEF 1487 HSP 2 Score: 68.5514 bits (166), Expect = 8.266e-11 Identity = 59/123 (47.97%), Postives = 71/123 (57.72%), Query Frame = 2 Query: 2408 QGPSGYPGE---RGETGEPGSVGPTGLIGSIGAPGSTGDPGSD---------GERGSIGSRGPT---GDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 QGP G PGE RG G+PG+VGP G +G GAPG+ G PGSD GERG +GS GP GDPG+ G G+ G G G G +G G G +G G DG PGPPG G +G+ G+ Sbjct: 489 QGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGS 611 HSP 3 Score: 60.077 bits (144), Expect = 3.153e-8 Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 2429 GERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGF 2677 GERG+ G+PG G G G+ G PG G PG G+RG GSRGP G PG+ G G+ G G +G G G G RG G+RGF Sbjct: 1063 GERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145 HSP 4 Score: 58.9214 bits (141), Expect = 7.141e-8 Identity = 133/348 (38.22%), Postives = 160/348 (45.98%), Query Frame = 2 Query: 1715 TGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQG------VKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGD---PGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G RG G+PG+PG G G+ G++G +G KG++G G G G G RG GERG+ GP+G GK G G PG GP+G GI G G G G G +GP G +GP GP G RG G G G +G G +G + G G KG G G GPPG G GS GP G G G G G+ G G+ GE G GEP GP G+ G IG PG G G G+ G++G GP G+ PG G G DG PG KGA G RG G+ G G +G G PG PG GA+G G Sbjct: 279 SGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGR---LGPQGAPGKRG------------------------------AHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVG---------------TDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEP---GPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGN 575 HSP 5 Score: 56.9954 bits (136), Expect = 2.798e-7 Identity = 54/135 (40.00%), Postives = 64/135 (47.41%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGL------------------IGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGP------RGTPGARGNI---GYRGFDGIPGPPGPNGAKGEQG 2728 +G G PG G G PG VGPTG +G G G G+ G+ G G++G RG GDPG GL G G PG G VG RG PG+RG + G G G+PGP GP G KG+ G Sbjct: 998 QRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGEPGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNG 1132 HSP 6 Score: 55.4546 bits (132), Expect = 9.028e-7 Identity = 52/113 (46.02%), Postives = 61/113 (53.98%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGD---PGKDGLSGIDGNPGAKGAVGPRGTPGARGNI------GYRGFDGIPGPPGPNGAKGEQGT 2731 G PG G TGE VG +G G+ G PG+ G PG G RG G GP G+ PG G +G G GA G +GPRG PG RG + G RG G+PG PGP G G G+ Sbjct: 265 GEPGRNGNTGE---VGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGS 374 HSP 7 Score: 53.9138 bits (128), Expect = 2.320e-6 Identity = 51/133 (38.35%), Postives = 62/133 (46.62%), Query Frame = 2 Query: 3023 GPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPG 3421 GP G +GP G G PG G PG+PG G G PG +GPEG G G PG+ G PG PG +G +G+ G MGL G KG +G +G GE G G+PG +G PG Sbjct: 544 GPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGS---------------------------------MGLPGPKGSSGDLGKPGEAGNAGVPGQRGAPG 643 HSP 8 Score: 53.5286 bits (127), Expect = 3.751e-6 Identity = 56/159 (35.22%), Postives = 70/159 (44.03%), Query Frame = 2 Query: 3023 GPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGST------------------------GNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 GP+GP G G G PG GS G+PG +G G PG KGP G+ G++ G GD G+PG GE GP+GE G G+QGP+G GE+G+ GP G G VG PG G +G PG + Sbjct: 394 GPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPH---------------------------GIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNR 525 HSP 9 Score: 52.7582 bits (125), Expect = 4.954e-6 Identity = 62/138 (44.93%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 3029 QGPNGPIGSPGLPGIQGSPGVPGDMGEHGP---PGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLP---GLQGEPGT 3424 +G GP G PG GIQG G PG+ G+ GP PG GP G G G PG++G PG G GP+G +G+RG G G G G G G PG G G+ G G+ G +G+ GP+G GE G PG P G++G+PG+ Sbjct: 474 KGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGS 611 HSP 10 Score: 52.7582 bits (125), Expect = 5.574e-6 Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G QGP+G PG +G++GP GD G G G G +G G RG G GL G G+ G+ GP+G GPKG G G+ G+PGL G R Sbjct: 487 GIQGPIGPPGE---EGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGAR 570 HSP 11 Score: 52.373 bits (124), Expect = 8.076e-6 Identity = 52/136 (38.24%), Postives = 58/136 (42.65%), Query Frame = 2 Query: 3020 MGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 MG GP GP G PG G G G PG G HG PG GP G G G+ G G PG+ GE GP G +GP G G++GE GP GP G G+PG G G PG K Sbjct: 327 MGAMGPLGPRGMPGERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGP---------------------------------TGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAK 429 HSP 12 Score: 51.9878 bits (123), Expect = 8.567e-6 Identity = 45/103 (43.69%), Postives = 53/103 (51.46%), Query Frame = 2 Query: 2432 ERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDG---ERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 ++G GEPG+VGP G G G PG G+PG G E+G G GP G GNPG G +G G PG +G G RG G PGP G G GE+G Sbjct: 692 DQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGP---------DGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGA 785
BLAST of Collagen F-8 vs. Ensembl Mouse
Match: Col5a1 (collagen, type V, alpha 1 [Source:MGI Symbol;Acc:MGI:88457]) HSP 1 Score: 125.561 bits (314), Expect = 2.097e-30 Identity = 70/239 (29.29%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L+ + ++RP+G++ NPAR C+D+ L +P G +W+DPN G DS +V C F TCV K+S +TS+ K ENP W+ L +D GN + + Q+ FL++L A Q VT C ++ + D+ ++D AIR ND + + +++ + D C + + + +I K E +PIVDI DFG +QK Sbjct: 119 MEEIFGSLNSLKLEIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGG-STCVFPDKKSEGARITSWPK-ENPGSWFSEFKRGKLLSYVDAEGNPVGVV------QMTFLRLLSASAHQNVTYNCYQSVAWQDAATGSYDKAIRFLGSNDEEMSYDNNPYIRA----------LVDGCATK-KGYQKTVLEIDTPKVEQVPIVDIMFNDFGEASQKF 338
BLAST of Collagen F-8 vs. Ensembl Mouse
Match: Col2a1 (collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452]) HSP 1 Score: 130.568 bits (327), Expect = 9.609e-30 Identity = 67/245 (27.35%), Postives = 113/245 (46.12%), Query Frame = 2 Query: 4346 SILKKLYSNIDKLEKNMN----SIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILD-------QNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 S L++ +D K++N SI+ P GS+ NPAR C+D+ L +P+ SG++WIDPN G D+++V C E+ +TCV + + K++ + W E ++ +GN Q+ FL++L T+ Q +T C + Y D N A+ ++ N D ++++E S +KD C + + ++KT LPI+DI D G Q+ Sbjct: 1178 STLRQHDVEVDATLKSLNNQIESIRSPDGSRKNPARTCQDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNM--ETGETCVYPNPATVPRKNWWSSKSKEKKHIWFGETMNGGFHFSYGDGNLAPNTANV---QMTFLRLLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSN--------DVEMRAEGNSRFTYTALKDGCTKHTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGAEQEF 1409 HSP 2 Score: 58.5362 bits (140), Expect = 1.033e-7 Identity = 43/89 (48.31%), Postives = 51/89 (57.30%), Query Frame = 2 Query: 2465 GPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G+ G G PG GDPG G G+ G +G +PG DG SG+DG PG +G G RG G G G RGF G+PGP G G +G G Sbjct: 859 GPKGVRGDSGPPGRAGDPGLQGPAGAPGEKG---EPGDDGPSGLDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGA 944 HSP 3 Score: 57.3806 bits (137), Expect = 2.482e-7 Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGS---RGPTGDPGKDGLSGIDGNPGAKGAVGPRGT---PGARGNI 2662 + G G PGERGETG PG G G G+ G PG+ GD G G++G G+ +GP+G PG G +G+ G GA+GA GP G PGA G + Sbjct: 746 STGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGDQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRV 837
BLAST of Collagen F-8 vs. UniProt/SwissProt
Match: sp|Q61245|COBA1_MOUSE (Collagen alpha-1(XI) chain OS=Mus musculus OX=10090 GN=Col11a1 PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.191e-33 Identity = 70/239 (29.29%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L++++ ++ P+G+++NPAR C+D+ LS+P G +WIDPN G DS +V C F +TC+ K+S ++S+ K E P W+ L LD GN + M Q+ FL++L A Q T C+++A +YD ++ ++D A+R ND + + +K+ + D C R + + +I+ K + +PI+D+ + DFG+ NQK Sbjct: 1574 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTAGG-ETCIYPDKKSEGVRISSWPK-EKPGSWYSEFKRGKLLSYLDVEGNSIN------MVQMTFLKLLTASARQNFTYNCHQSAAWYDVLSGSYDKALRFLGSNDEEMSYENNPHIKA----------LYDGCASR-KGYEKTVIEINTPKIDQVPIIDVMINDFGDQNQKF 1793 HSP 2 Score: 94.7449 bits (234), Expect = 7.624e-18 Identity = 61/254 (24.02%), Postives = 102/254 (40.16%), Query Frame = 2 Query: 224 IKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQP 940 ++P + + +++ ++T R ++ DIL+ + P I TG C+ + Y V EA + + +F FSIL T K + + + S+ + +G L ++GR V F + G + + D WHRVA+SV + + VDC+ PL R + + I+V G L + G IQ I +AAY C+ Y+ DC Q+P Sbjct: 1 MEPWSRWKTKRWIWDLTISTLALTFLFQAREVRGAAPVDILKALDFHNSPVGISKTTGFCTNRKNSKDPDVAYRVTEEAQISAPTKQLFPGGIFPQDFSILFTIKPKKGTQAFLLSLYNEHGIQQLGVEVGRSPVFLFEDHTGKPTPENYPLFSTVNIADGKWHRVAISVEKKTVTMIVDCKKKITKPLDRSERSIVDTNGIMVFGTRILETDVFQGDIQQFLITGDPKAAYDYCDHYSPDCDLTSKAAQAQEP 254 HSP 3 Score: 58.9214 bits (141), Expect = 5.801e-7 Identity = 52/120 (43.33%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAKGAVGPRGT------PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G GE+GE G PG G GL G G G G G DG G G GPTGDPG G + G+ G PG G GP+G+ PGA G G RG G PGP G G G +G+ Sbjct: 769 RGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGS 888 HSP 4 Score: 55.0694 bits (131), Expect = 8.583e-6 Identity = 44/95 (46.32%), Postives = 50/95 (52.63%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G TG+PG G G G +G PG G PG G +GS G G G G+ G GI G PG +G GP G RG+ G RG G PGP Sbjct: 809 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTG---PRGSRGARGPTGKPGP 900
BLAST of Collagen F-8 vs. UniProt/SwissProt
Match: sp|P20909|COBA1_RAT (Collagen alpha-1(XI) chain OS=Rattus norvegicus OX=10116 GN=Col11a1 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.819e-33 Identity = 70/239 (29.29%), Postives = 127/239 (53.14%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L++++ ++ P+G+++NPAR C+D+ LS+P G +WIDPN G DS +V C F +TC+ K+S L+S+ K E P W+ L LD GN + M Q+ FL++L A Q T C+++ +YD ++ ++D A+R ND + + +K+ + D C R + + +I+ K + +PI+D+ + DFG+ NQK Sbjct: 1574 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTAGG-ETCIYPDKKSEGVRLSSWPK-EKPGSWYSEFKRGKLLSYLDVEGNSIN------MVQMTFLKLLTASARQNFTYNCHQSTAWYDVLSGSYDKALRFLGSNDEEMSYENNPHIKA----------LYDGCASR-KGYEKTVIEINTPKIDQVPIIDVMINDFGDQNQKF 1793 HSP 2 Score: 94.3597 bits (233), Expect = 8.365e-18 Identity = 64/254 (25.20%), Postives = 103/254 (40.55%), Query Frame = 2 Query: 224 IKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMC-SMPGSK---LGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQP 940 ++P + + +++ +T R ++ DIL+ + P I TG C S SK + Y V EA + + +F FSIL T K + + + S+ + +G L ++GR V F + G + + D WHRVA+SV + + VDC+ PL R + + I+V G L + G IQ I +AAY C+ Y+ DC Q+P Sbjct: 1 MEPWSRWKTKRWIWDLTISTLVLTFLFQAREVRGAAPVDILKALDFHNSPVGISKTTGFCTSRKNSKDPDIAYRVTEEAQISAPTKQLFPGGIFPQDFSILFTIKPKKGTQAFLLSLYNEHGIQQLGVEVGRSPVFLFEDHTGKPTPENYPLFSTVNIADGKWHRVAISVEKKTVTMIVDCKKKITKPLDRSERSIVDTNGIMVFGTRILETDVFQGDIQQFLITGDPKAAYDYCDHYSPDCDLTSKAAQAQEP 254 HSP 3 Score: 59.3066 bits (142), Expect = 4.660e-7 Identity = 52/120 (43.33%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAKGAVGPRGT------PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G GE+GE G PG G GL G G G G G DG G G GPTGDPG G + G+ G PG G GP+G+ PGA G G RG G PGP G G G +G+ Sbjct: 769 RGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGS 888 HSP 4 Score: 55.4546 bits (132), Expect = 7.012e-6 Identity = 44/95 (46.32%), Postives = 50/95 (52.63%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP 2695 GP G G G TG+PG G G G +G PG G PG G +GS G G G G+ G GI G PG +G GP G RG+ G RG G PGP Sbjct: 809 GPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTG---PRGSRGARGPTGKPGP 900
BLAST of Collagen F-8 vs. UniProt/SwissProt
Match: sp|P12107|COBA1_HUMAN (Collagen alpha-1(XI) chain OS=Homo sapiens OX=9606 GN=COL11A1 PE=1 SV=4) HSP 1 Score: 143.28 bits (360), Expect = 1.156e-32 Identity = 71/239 (29.71%), Postives = 127/239 (53.14%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L++++ ++ P+G+++NPAR C+D+ LS+P G +WIDPN G DS +V C F +TC+ K+S ++S+ K E P W+ L LD GN + M Q+ FL++L A Q T C+++A +YD + ++D A+R ND + + +K+ + D C R + + +I+ K + +PIVD+ + DFG+ NQK Sbjct: 1576 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNF-TSGGETCIYPDKKSEGVRISSWPK-EKPGSWFSEFKRGKLLSYLDVEGNSIN------MVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIKT----------LYDGCASR-KGYEKTVIEINTPKIDQVPIVDVMINDFGDQNQKF 1795 HSP 2 Score: 98.2117 bits (243), Expect = 6.451e-19 Identity = 60/227 (26.43%), Postives = 95/227 (41.85%), Query Frame = 2 Query: 269 FSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCS----MPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEF----KTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTR------EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDC 904 F++ ++T R ++ D+L+ + P I TG C+ GS Y V +A L + +F FSIL T K + + S+ + +G + ++GR V F + G ++ + D WHRVA+SV + + VDC+ PL R + + I V G L + + G IQ I +AAY CE Y+ DC Sbjct: 17 FTVTTLALTFLFQAREVRGAAPVDVLKALDFHNSPEGISKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSILFTVKPKKGIQSFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIVDCKKKTTKPLDRSERAIVDTNGITVFGTRILDEEVFEGDIQQFLITGDPKAAYDYCEHYSPDC 243 HSP 3 Score: 58.5362 bits (140), Expect = 8.057e-7 Identity = 52/120 (43.33%), Postives = 60/120 (50.00%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS------GIDGNPGAKGAVGPRGT------PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G G GE+GE G PG G GL G G G G G DG G G GPTGDPG G + G+ G PG G GP+G+ PGA G G RG G PGP G G G +G+ Sbjct: 771 RGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGS 890
BLAST of Collagen F-8 vs. UniProt/SwissProt
Match: sp|P02460|CO2A1_CHICK (Collagen alpha-1(II) chain (Fragment) OS=Gallus gallus OX=9031 GN=COL2A1 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 6.437e-32 Identity = 77/268 (28.73%), Postives = 126/268 (47.01%), Query Frame = 2 Query: 4259 TRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILD-----QNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 + F +TE+G D + + G+ ++ + + L + SI+ P GSK NPAR CRDI L +P+ SG++WIDPN G D+I+V C E+ +TCV T S + KT++ + W +E ++ G++ + Q+ FL++L T+ Q VT C + Y D N AI ++ N D ++++E S ++D C + + ++KT LPIVDI D G +Q+ Sbjct: 593 SAFAGLGQTEKGPDPIRYMRADEAAGGLRQHDVEVDATLKSLNNQIESIRSPEGSKKNPARTCRDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNM--ETGETCVYPTPSSIPRKNWWTSKTKDKKHVWFAETINGGFHFSYGDENLSPNTASI-QMTFLRLLSTEGSQNVTYHCKNSIAYMDEETGNLKKAILIQGSN--------DVEIRAEGNSRFTYSVLEDGCTKHTGKWGKTVIEYRSQKTSRLPIVDIAPMDIGGADQEF 849
BLAST of Collagen F-8 vs. UniProt/SwissProt
Match: sp|O93484|CO1A2_ONCMY (Collagen alpha-2(I) chain OS=Oncorhynchus mykiss OX=8022 GN=col1a2 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.075e-31 Identity = 73/245 (29.80%), Postives = 112/245 (45.71%), Query Frame = 2 Query: 4346 SILKKLY---SNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKY-----CPMS---QLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 S K Y + I L + ++ P GSK NPAR CRDI LS+P +SG +WIDPN G I D+I+ C F + TC+ +S + ++ +EN + W E + N + Y P S QL F+++L +A Q +T C + Y D N N A+ ++ N D +L++E S ++D C + + + K LPI+DI D G +Q+ Sbjct: 1117 SFRAKDYEVDATIKSLNSQIENLLTPEGSKKNPARTCRDIRLSHPDWSSGFYWIDPNQGCIADAIKAYCDF--STGHTCIHPHPES-IARKNWYRSSENKKHVWFGETI----NGGTEFAYNDETLSPQSMATQLAFMRLLANQATQNITYHCKNSVAYMDGENGNLKKAVLLQGSN--------DVELRAEGNSRFTFNVLEDGCTRHTGQWSKTVIEYRTNKPSRLPILDIAPLDIGEADQEF 1346 HSP 2 Score: 58.5362 bits (140), Expect = 6.414e-7 Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 2417 SGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPR---GTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G PGE G+TG G+ GPTG G G G+ G PG G+RG G++G G PG GL G+ G+ G G G + GT GA+G G G +G PGP G G GE+G Sbjct: 111 AGEPGEPGQTGSIGARGPTGSAGKPGEDGNNGRPGKPGDRGGPGTQGARGFPGTPGLPGMKGHRGYNGLDGRKGESGTAGAKGETGAHGANGSPGPAGSRGLNGERG 217
BLAST of Collagen F-8 vs. TrEMBL
Match: A0A4D6FZN3 (Collagen F-8 (Fragment) OS=Schmidtea mediterranea OX=79327 GN=colF-8 PE=2 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 4.169e-137 Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 2 Query: 4370 NIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKT 4987 NIDKLEKNMNSIQRPIGSK NPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKD+CMDRLRTPTNSQFQISAKKT Sbjct: 1 NIDKLEKNMNSIQRPIGSKXNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDNCMDRLRTPTNSQFQISAKKT 206
BLAST of Collagen F-8 vs. TrEMBL
Match: A0A564Z6L2 (Fibrillar collagen NC1 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS12507 PE=4 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 3.674e-73 Identity = 182/450 (40.44%), Postives = 258/450 (57.33%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGV---------EGVRGPQGPQGLKGEIGSSGKEG------PMGEDGPKG------------AIGPRGQRGDPGLAGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------DMQEGSSKYVNTGTRFKREAKTEEGKDKL-----ENPE---IPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKV---TSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +G QGP GE G G G GP G RG G G QG +GV EG+ GP GP+G +GE G G++G PMG GP+G IGP+G +G PG G +GP G GPPGP GP+G GP G G +GP G G GP D+ G K+ T T+ + +D L ++P+ P + I ++L++LY+ I+ LE + QRPIG+++ PARHCR+I + SG +WIDPNLGS D+I+VECKF KTCV AT +S L + KK+ + WW S +L+ N N +++ Y P +Q+ FLQ+LH KAEQ++T +C + VYYDS NK++++A + FN ++I+TH+DR+++ E G LE+ VKDDCMDR T + + F + A E LP++D+++ DFG DNQ++ Sbjct: 1213 VGPQGPPGETGPVGAAGLSGPPGLRGSPGSPGPQGPQGVTGPDGEDGPEGLPGPAGPEGARGETGPKGEKGAYGPVGPMGPSGPRGERGVTGVVGERGGIGPKGAQGPPGPIGNQGPPGDVGPPGPEGPMGARGPTGLSGPRGPKGKQGPQGPQGPPGPVKILDLNAGYFKFEPTRTKRSVNPDESDIEDDLYDGYMKDPDANLFPNNVPAIGAVLRRLYARIEGLENAVKYYQRPIGTRAYPARHCREIAEATDSPHGPVSGEYWIDPNLGSSRDAIKVECKFSGNVAKTCVHATPESKALRLMNLKKSSSEGSWWFSRLLEDNNNGTQRLFYAPRNQMNFLQLLHHKAEQSITALCRGSVVYYDSRNKDYNSAANLLLFNGKVINTHLDRRVRGEGGFVELEVNVKDDCMDRSLTGSTASFDLVASHPELLPVMDMKMFDFGEDNQQI 1662 HSP 2 Score: 202.216 bits (513), Expect = 3.686e-48 Identity = 227/627 (36.20%), Postives = 296/627 (47.21%), Query Frame = 2 Query: 236 NVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGS--------------KLGYIVGPEANLHLKSSF-------IFKAEKLLGSFSILLTAKVDRLSSDTIFS--------VNDINGHLNLAFKIGRKTVLHFR--EPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGL-HDIMMNQQPDD--SNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFG------------FKGENGPPGDTGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSKGDFGQIGVKGDN------------GIIGEDGPRGPFGDSGDQGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGL 1942 + + V L+ V S + +S D+L K+ + +Q G C S + GY+V + L +K I + ++ F++ + +++ TIFS V +GH +++ V R G + + LDD WHRV L+ + L +DC+ E I I + LL G+ GV+QDL V G + +QC IYT +CP D MMN P G +G GD GE GEKG+ GK G G G +G PGP G +F++PLNLG GG AR A+FR L H+ ++GVRG RG TG GPDG +G G F+G GP G TG GPRG +G G RG G SG G G GD G +G KG N G GE+GPRGP GD GDQG+ G G +G G GP GP G G++G G +GE G G G+ GP GP GP GPEG +GPRG+ GP G G++G PG G +G PGY G KG+ G KGD+G GQ+G+ G G RG KG RG G GPKGDIGK G + Sbjct: 17 TCLALILFSVFLILSSSLVVSAKTFLLDLPASSVDLLAAFKLGDQANVQITAGKCGQVPSEDEVSSKVPIPDEFRPGYLV--PSGLEMKKLLSEVLPETIDWSHEMSVFFTLKMKPSLEKAEFFTIFSSQGRILLSVGIESGHFVVSYHEAAAGVRAARISTSGNAIHSEKISPALDD-QWHRVGLNFKEGRVHLALDCKTLESYTTVLPIKFIDPRNTLSLLPSGFEGVLQDLMFVQGDRSLEQQCLIYTPNCPTDGDDAMMNDGPVPLAPGQGEQGEQGDPGEQGEKGDPGKPGPRGPDGLQGLPGPVGSLFVVPLNLGIGGGAHARAAHFRQLLQQHLESLRGVRGPRGLTGPTGPDGPMGPVGPKGETGPQGDAGFQGRRGPIGPTGLPGPRGKTGRDGDRGDPGPSGPKGPD------------------------GLPGDSGLMGPKGLNGPRGPPGPVGEQGAPGEEGPRGPTGDQGDQGDTGPYGPRGPVGLQGPLGPRGKTGSRGSVGLQGEAGEPGPTGMAGPMGPAGPAGPEGPAGPRGAVGPPGPTGKEGPPGATGPEGRPGYPGPKGEIGPKGDTGASGQKGEPGLPGPRGVKGSRGIIGVTGPKGDIGKPGAV 616 HSP 3 Score: 76.6406 bits (187), Expect = 7.462e-10 Identity = 138/345 (40.00%), Postives = 160/345 (46.38%), Query Frame = 2 Query: 2429 GERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFD------------GIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 G RG TG G GP G +G G G GD G G RG IG G G GK G G G+PG G GP G PG G +G +G + G PG GP G G+QG G+ GP G +G +GL G GP G TG+RG G G G G G AG G G G G G +G +GP GP G G PG G +G PG PG GE GP G G G +G G PG +G+ G G +G G KGD GK G G G GP G G G +G G+ GP G GE G+ G GP G+ GV G PGL G G + Sbjct: 362 GPRGLTGPTGPDGPMGPVGPKGETGPQGDAGFQGRRGPIGPTGLPGPRGKTGRDGDRGDPGPSGPKGPDGLPGDSGLMGPKGLNGPRGPPGPVGEQGAPGEEGPRGPTGDQGDQGDTGPYGP------------------------------RGPVGLQGPLGPRGKTGSRGSVGLQGEAGEPGPTGMAGPMGPAGPAGPEGPAGPRGAVGPPGPTGKEGPPGATGPEGRPGYPGPKGEIGPKGDTGASGQKGEPGLPGPRGVKGSRGIIGVTGPKGDIGKPGAVGPQGEAGPKGLKGSRGSQGVMGLMGPQGEKGEPGKPGESGPRGDRGVQGPPGLIGPAGPQ 676 HSP 4 Score: 72.0182 bits (175), Expect = 1.898e-8 Identity = 154/389 (39.59%), Postives = 173/389 (44.47%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLD------------GDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGP------------------------------------EGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 QGP G+PG RGE GE G GP G IG G G GD G +G G IG RGPTGDPGK+G G+ G+ G KG G RG PG RG GY G DG+PGP GP+G KGE G D GD GPIG TG G G G G G G G G G +G G G +G GP GPIG+PG G +G G G G+ GP G +GP EG G G PG GM G PG +G QG KGDRG+ GP GSPG GP+G GL G G G GP G +GE G+ GP GP G G G+PG G G K Sbjct: 771 RQGPQGFPGPRGEPGETGPPGPRGPIGMTGPAGPAGDTGPEGAPGPIGPRGPTGDPGKEGKEGVKGDKGPKGERGNRGPPGPRGPRGYIGLDGMPGPAGPDGFKGE---------------------------------------------TGPDGEVGPAGPKGYRGDSGPIGQTGPPGPAGPRGAQGIPGEKGPKGPDGVMGPVGPPGPRGSRGRSGP---TGPIGAPGFDGEKGERGSAGPPGKKGPSGPQGPRGIAGPIGSPGMPGIQGPPGAPGQPGEQGPMGLIGSEGLTGPAGLPGPMGMEGAPGPIGKQGPKGDRGRVGPQGSPGPAGPMGAIGLTGPAGNPGPTGPAGAVGEPGDVGPQGPRGSPGYAGIPGNHGPQGRK 1111 HSP 5 Score: 64.3142 bits (155), Expect = 3.213e-6 Identity = 137/345 (39.71%), Postives = 167/345 (48.41%), Query Frame = 2 Query: 1733 RGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGD------DGGFGTRGYKGERGKPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGE------KGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 RG +G G G DG G G KG+ G +GD+G G+RG G G G G+RG PG GPKG G G G G GL G G GP G G GE+GP GPTG++G G+ +G +G++GP+G G G RG G +G G GP+G+ G MGP GP GP GP G +G+ GP GP G GP G+ G +G GYPG +GE G G TG G G PG G G G RG IG GP GD GK G G G G KG G RG+ G G +G +G G PG PG +G +G++G Sbjct: 361 RGPRGLTGPTGPDGPMGPVGPKGETGPQGDAGFQGRRGPIGPTGLPGPRGKTGRDGDRGDPGPSGPKGPDGLPG---------------------------------------DSGLMGPKGLNGPRGPPGPVGEQGAPGEEGPRGPTGDQGDQGDTGPYGPRGPVGLQGPLGPRGKTGSRGSVGLQGEAGEPGPTGMAGPMGPAGPAGPEGPAGPRGAVGPPGPTGKEGPPGATGPEGRPGYPGPKGEIGPKGD---TGASGQKGEPGLPGPRGVKGSRGIIGVTGPKGDIGKPGAVGPQGEAGPKGLKGSRGSQGVMGLMGPQGEKGEPGKPGESGPRGDRGV 663
BLAST of Collagen F-8 vs. TrEMBL
Match: A0A0R3S998 (Fibrillar collagen NC1 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS797 PE=4 SV=2) HSP 1 Score: 280.026 bits (715), Expect = 4.000e-72 Identity = 176/407 (43.24%), Postives = 249/407 (61.18%), Query Frame = 2 Query: 3860 GLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMQEGSSKYVNTGTRFKREAKTEEGKDKL-----ENPE---IPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKV---TSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 G GP+G GP G G +G G +G KG G GP GP G +GE G +G G G GPKGA GP G G+ G G+ GP GP GP G GP G GP+G KG +GP G G PGPVKI+D+ G K+ T T+ + +D L ++P+ P + I ++L++LY+ I+ LE + QRPIG+++ PARHCR+I + SG +WIDPNLGS D+I+VECKF KTCV AT +S L + KK+ + WW S +L+ N N +++ Y P +Q+ FLQ+LH KAEQ++T +C + VYYDS NK++++A + FN ++I+TH+DR+++ E G LE+ VKDDCMDR T + + F + A E LP++D+++ DFG DNQ++ Sbjct: 1259 GEDGPEGLPGPAGPEGARGETGPKGEKGAYGPVGPMGPSGPRGERGVTGVVGERGGIGPKGAQGPPGPIGNQGPPGDVGPPGPEGPMGARGPTGLSGPRGPKGKQGPQGPQGPPGPVKILDLNAGYFKFEPTRTKRSVNPDESDIEDDLYDGYMKDPDANLFPNNVPAIGAVLRRLYARIEGLENAVKYYQRPIGTRAYPARHCREIAEATDSPHGPVSGEYWIDPNLGSSRDAIKVECKFSGNVAKTCVHATPESKALRLMNLKKSSSEGSWWFSRLLEDNNNGTQRLFYAPRNQMNFLQLLHHKAEQSITALCRGSVVYYDSRNKDYNSAANLLLFNGKVINTHLDRRVRGEGGFVELEVNVKDDCMDRSLTGSTASFDLVASHPELLPVMDMKMFDFGEDNQQI 1665 HSP 2 Score: 179.874 bits (455), Expect = 2.255e-41 Identity = 212/676 (31.36%), Postives = 282/676 (41.72%), Query Frame = 2 Query: 236 NVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGS--------------KLGYIVGPEANLHLKSSF-------IFKAEKLLGSFSILLTAKVDRLSSDTIFS--------VNDINGHLNLAFKIGRKTVLHFR--EPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHD----------------------------IMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRG------------------------------------PTGSPGPDGSLGGFGFKGENGPPGDTGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSKGDFGQIGVKGDN------------GIIGEDGPRGPFGDSGDQGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGL 1942 + + V L+ V S + +S D+L K+ + +Q G C S + GY+V + L +K I + ++ F++ + +++ TIFS V +GH +++ V R G + + LDD WHRV L+ + L +DC+ E I I + LL G+ GV+QDL V G + +QC IYT +CP D I++ P G +G GD GE GEKG+ GK G G G +G PGP G +F++PLNLG GG AR A+FR L H+ ++GVRG RG PTG PGP G G G +G+ GP G G G GD G +G KG N G GE+GPRGP GD GDQG+ G G +G G GP GP G G++G G +GE G G G+ GP GP GP GPEG +GPRG+ GP G G++G PG G +G PGY G KG+ G KGD+G GQ+G+ G G RG KG RG G GPKGDIGK G + Sbjct: 17 TCLALILFSVFLILSSSLVVSAKTFLLDLPASSVDLLAAFKLGDQANVQITAGKCGQVPSEDEVSSKVPIPDEFRPGYLV--PSGLEMKKLLSEVLPETIDWSHEMSVFFTLKMKPSLEKAEFFTIFSSQGRILLSVGIESGHFVVSYHEAAAGVRAARISTSGNAIHSEKISPALDD-QWHRVGLNFKEGRVHLALDCKTLESYTTVLPIKFIDPRNTLSLLPSGFEGVLQDLMFVQGDRSLEQQCLIYTPNCPTDGDDAMMNDGVSYRFKELSFFFISQSNPQFHILLQPVPLAPGQGEQGEQGDPGEQGEKGDPGKPGPRGPDGLQGLPGPVGSLFVVPLNLGIGGGAHARAAHFRQLLQQHLESLRGVRGPRGLTGPTGPDGPMGPVGPKGETGPQGDAGFQGRRGPIGPTGLPGPRGKTGRDGDRGDPGPSGPKG------------------------------------------------PDGLPGDSGLMGPKGLNGPRGPPGPVGEQGAPGEEGPRGPTGDQGDQGDTGPYGPRGPVGLQGPLGPRGKTGSRGSVGLQGEAGEPGPTGMAGPMGPAGPAGPEGPAGPRGAVGPPGPTGKEGPPGATGPEGRPGYPGPKGEIGPKGDTGASGQKGEPGLPGPRGVKGSRGIIGVTGPKGDIGKPGAV 641 HSP 3 Score: 77.411 bits (189), Expect = 3.556e-10 Identity = 138/345 (40.00%), Postives = 160/345 (46.38%), Query Frame = 2 Query: 2429 GERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFD------------GIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 G RG TG G GP G +G G G GD G G RG IG G G GK G G G+PG G GP G PG G +G +G + G PG GP G G+QG G+ GP G +G +GL G GP G TG+RG G G G G G AG G G G G G +G +GP GP G G PG G +G PG PG GE GP G G G +G G PG +G+ G G +G G KGD GK G G G GP G G G +G G+ GP G GE G+ G GP G+ GV G PGL G G + Sbjct: 387 GPRGLTGPTGPDGPMGPVGPKGETGPQGDAGFQGRRGPIGPTGLPGPRGKTGRDGDRGDPGPSGPKGPDGLPGDSGLMGPKGLNGPRGPPGPVGEQGAPGEEGPRGPTGDQGDQGDTGPYGP------------------------------RGPVGLQGPLGPRGKTGSRGSVGLQGEAGEPGPTGMAGPMGPAGPAGPEGPAGPRGAVGPPGPTGKEGPPGATGPEGRPGYPGPKGEIGPKGDTGASGQKGEPGLPGPRGVKGSRGIIGVTGPKGDIGKPGAVGPQGEAGPKGLKGSRGSQGVMGLMGPQGEKGEPGKPGESGPRGDRGVQGPPGLIGPAGPQ 701 HSP 4 Score: 72.4034 bits (176), Expect = 1.117e-8 Identity = 154/389 (39.59%), Postives = 173/389 (44.47%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLD------------GDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGP------------------------------------EGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 QGP G+PG RGE GE G GP G IG G G GD G +G G IG RGPTGDPGK+G G+ G+ G KG G RG PG RG GY G DG+PGP GP+G KGE G D GD GPIG TG G G G G G G G G G +G G G +G GP G PIG+PG G +G G G G+ GP G +GP EG G G PG GM G PG +G QG KGDRG+ GP GSPG GP+G GL G G G GP G +GE G+ GP GP G G G+PG G G K Sbjct: 796 RQGPQGFPGPRGEPGETGPPGPRGPIGMTGPAGPAGDTGPEGAPGPIGPRGPTGDPGKEGKEGVKGDKGPKGERGNRGPPGPRGPRGYIGLDGMPGPAGPDGFKGE---------------------------------------------TGPDGEVGPAGPKGYRGDSGPIGQTGPPGPAGPRGAQGIPGEKGPKGPDGVMGPVGPPGPRGSRGRSGPTG---PIGAPGFDGEKGERGSAGPPGKKGPSGPQGPRGIAGPIGSPGMPGIQGPPGAPGQPGEQGPMGLIGSEGLTGPAGLPGPMGMEGAPGPIGKQGPKGDRGRVGPQGSPGPAGPMGAIGLTGPAGNPGPTGPAGAVGEPGDVGPQGPRGSPGYAGIPGNHGPQGRK 1136 HSP 5 Score: 65.0846 bits (157), Expect = 1.988e-6 Identity = 137/345 (39.71%), Postives = 168/345 (48.70%), Query Frame = 2 Query: 1733 RGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGD------DGGFGTRGYKGERGKPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGE------KGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 RG +G G G DG G G KG+ G +GD+G G+RG G G G G+RG PG GPKG G G G G GL G G GP G G GE+GP GPTG++G G+ +G +G++GP+G G G RG G +G G GP+G+ G MGP GP GP GP G +G+ GP GP G GP G+ G +G GYPG +GE G G G +G G G PG G GS RG IG GP GD GK G G G G KG G RG+ G G +G +G G PG PG +G +G++G Sbjct: 386 RGPRGLTGPTGPDGPMGPVGPKGETGPQGDAGFQGRRGPIGPTGLPGPRGKTGRDGDRGDPGPSGPKGPDGLPG---------------------------------------DSGLMGPKGLNGPRGPPGPVGEQGAPGEEGPRGPTGDQGDQGDTGPYGPRGPVGLQGPLGPRGKTGSRGSVGLQGEAGEPGPTGMAGPMGPAGPAGPEGPAGPRGAVGPPGPTGKEGPPGATGPEGRPGYPGPKGEIGPKGDTGASGQKGEPGLPGPRGVKGS---RGIIGVTGPKGDIGKPGAVGPQGEAGPKGLKGSRGSQGVMGLMGPQGEKGEPGKPGESGPRGDRGV 688
BLAST of Collagen F-8 vs. TrEMBL
Match: A0A4E0S121 (Collagen alpha-1(XI) chain OS=Fasciola hepatica OX=6192 GN=D915_005268 PE=4 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 5.416e-72 Identity = 175/414 (42.27%), Postives = 252/414 (60.87%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNP---KVTSGNFWIDPNLGSINDSIEVECKFEK--ESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQN--GNKMR-KIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +G GP+G+ G G +G G G+ G +G GI+G+KG G GP GP G KGE G+ G EG G DGPKG G G GDPG+ G G GP GP G G G G +G KG GP+G PG PGP+KI+D+ EG ++ + R KR K + P I ++L+++Y I+ LE ++N +P G++ +PARHCRDI S ++ SG +WIDPNLGS D+ VEC+F+ ++ TC++ T+++ LT FKKTEN + WWLS + Q N R ++ Y P +Q+ L +LH KAEQ+VT +C AVY+DS KNH+ A+R R F + I+T+ R+L+ SG+ +LE+KV+D+CM+R +S F+ +A++ LPI+D QL +FGN +Q++ Sbjct: 1259 VGIPGPMGKVGERGSEGVTGKQGEMGDQGKPGIKGIKGAIGPVGPVGPMGRKGEKGAPGLEGDRGPDGPKGERGAVGPIGDPGIPGPSGAEGPEGPAGYPGRPGLPGNQGPKGASGPMGPPGPPGPIKILDVSEGYYRFEDP-PRSKRSVDGVILKLDPDEAIAPTTVPSIGAVLRRVYQRIEILENSLNMFDQPTGTRRHPARHCRDILSSAEYPEQLKSGRYWIDPNLGSPTDTFPVECRFKDRGKTALTCIAPTEETQALPLTQFKKTENDQDWWLSRLRSQQVQSNFTRPQLYYAPHNQIRHLHLLHQKAEQSVTFVCRNTAVYFDSTQKNHNAAVRARLFTEHEINTYEHRRLRDLSGNMMLEVKVRDECMERTTNKASSVFEFTAREPNLLPILDFQLSEFGNTDQEI 1671 HSP 2 Score: 232.261 bits (591), Expect = 2.059e-57 Identity = 328/558 (58.78%), Postives = 379/558 (67.92%), Query Frame = 2 Query: 1739 RQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQG 3412 R G+ GVPGSDG PG+ G KGD G KGD+G VGQ+G+ G G RGYKG+RG+ G GPKGD GK G +G+ G+ GPKGVKGDIG G G GP+G KG PG QGP+G RG G+KG G +GPPG GPDGE+G GP G RG DG+KG +G++G GD+G+QGQRG PGSRG PG +GP G KGD G +GP GP G G QG GP GP+G TGP G++G GP G+PG RGE GE G G G +GS G PG+TGDPG DGERG +G RGP GD GKDG G DG PGAKG GP+G G+RG G+ GFDG+PG PGP G KGE G +GE GPIG KG GD G +G G G TG RGPPG G KG+ G+DG FG IG G RG GRPGPTG +G G G+KG KG G G GDKG +G +GP GPIGSPGLPGIQG PG+PG GE GP G GPEG RG TG+PG GM G PG G GEKGD G GP G G TG G G+ G++G G G G G+KG+ G G G +G PG PG+QG Sbjct: 562 RAGAAGVPGSDGLPGFPGQKGDTGAKGDAGDVGQKGETGVQGPRGYKGDRGRMGPTGPKGDAGKTGPMGVSGEVGPKGVKGDIGMPGPVGPPGPMGEKGNPGPQGPVGARGDPGVKGFMGAIGPPGPPGPDGERGVTGPAGPRGRDGDKGEVGIQGAPGDVGEQGQRGSPGSRGPPGKLGPPGPKGDSGSVGPVGPAGSFGEQGVQGPMGPVGPTGPQGAVGRPGPVGFPGPRGEPGERGPPGQPGALGSTGPPGATGDPGPDGERGPVGPRGPAGDAGKDGQPGRDGAPGAKGVRGPQGLAGSRGARGFPGFDGMPGRPGPTGPKGESGPNGEPGPIGSKGYMGDQGPMGPVGAPGLTGPRGPPGPAGEKGSTGVDGPFGLIGSPGPRGPQGRPGPTGQLGPHGFDGEKGSKGASGPPGIKGDKGGVGIRGPTGPIGSPGLPGIQGPPGIPGQSGEEGPQGLVGPEGNRGVTGSPGPIGMRGAPGAPGLPGEKGDTGLPGPRGRRGPTGLAGAPGILGQQGDVGQIGAAGAQGDKGDQGIHGIPGSIGFPGTPGVQG 1119 HSP 3 Score: 229.565 bits (584), Expect = 1.308e-56 Identity = 181/453 (39.96%), Postives = 249/453 (54.97%), Query Frame = 2 Query: 248 MYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSM-----PGSK---LGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHF---------------REPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQP---DDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEV 1528 M L VL L VQ+ S DIL+ +++ + ++++ G C GS+ LGY V +L + + + +L SIL T +V+ +F+V + G + L GR+ +++ ++ +T+ I+F T +DD WHRVA+S+ +L +DCQ E + + G ++LL G G IQDL+++P EAA +QC+IY+ DC D MM + D G G +GDMG PG+KG G GG GL G G PGP G +F+IPLNLG G + AR A FR+ L H++ +KGVRG RG TG PGPDG G G KGE G PG+TGFQGPRG G GR G +G G DG RG+ G G G+DG+PGDSG G +G+KG+ G G KGD G+ G +GPRGP GDSG+QGE+ Sbjct: 42 MLFLCVLVLLPVQTAGLFGSSSTESLIGTTDILKAVRLGDQAYVESVAGRCGARLEEPSGSEDNPLGYSVSRGMSLFIDGDRLITKD-VLSELSILFTVRVEWGFQGELFTVYNRQGQVELGVTFGRELRVYYVSGSANAKTHPRTQTKDKYSLTEVIQFNTSIDDNMWHRVAISMQKGIARLLIDCQQREYVSYDQSTFTFDDRGRLQLLKDGIQGAIQDLYLIPSGEAAGKQCDIYSTDC--AQDRMMGDEAVTTSDPMQGPTGPMGDMGPPGDKGEPGIPGGDGLVGDPGPPGPAGSLFVIPLNLGIGTSSFARAATFRDLLQKHLLSLKGVRGPRGMTGVPGPDGMQGERGVKGEPGHPGETGFQGPRGAMGLSGRPGPAGPPGRDGARGEPGANGPAGEDGRPGDSGHMGPKGAKGEVGHRGEKGDFGLPGAEGPRGPLGDSGEQGEI 491
BLAST of Collagen F-8 vs. TrEMBL
Match: A0A3P6G5X1 (Fibrillar collagen NC1 domain-containing protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS260 PE=4 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 4.470e-70 Identity = 112/246 (45.53%), Postives = 165/246 (67.07%), Query Frame = 2 Query: 4319 IPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPK---VTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 P + I ++L++LY+ I+ LE + ++P+G++S PARHCR+I + SG +WIDPNLGS D+ VEC+F KTCV AT +S LTS KK+ WWLS++L++ GN+ +K+ Y P +QL FLQ+LH KAEQ++T +C + VYYD+ NKN+++A M FN ++IDTH+DR+++ E GS LE+ VKDDCMDR + + F + AK E LPI+D+++ DFG +NQ+L Sbjct: 1377 FPNNVPAIGAVLRRLYARIENLESAVKYYRKPVGTRSYPARHCREIMEATDSPHGAVSGEYWIDPNLGSSKDAFLVECRFSGNVAKTCVHATAESKALRLTSLKKSSGESSWWLSKLLEEQGNRTQKLFYAPRNQLNFLQLLHHKAEQSITALCRGSVVYYDNKNKNYNSAANMLLFNGKVIDTHLDRRVRGEGGSVQLEVNVKDDCMDRPLAGSTASFDLVAKNPELLPILDLKMFDFGEENQQL 1622 HSP 2 Score: 210.69 bits (535), Expect = 7.346e-51 Identity = 343/860 (39.88%), Postives = 422/860 (49.07%), Query Frame = 2 Query: 416 KLGYIVGPEANLHLK---SSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREP------------GGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHD-------IMMNQQPDDS----------------NTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERG---------------------------------------------------KPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 + GY+V L +K + + + S+ T +V + +F++ G + L+ I + V+ +E G + + LDD WHRV L+ ++L VDC+ E L+ + I + LL G+ GVIQDL V G + +QC IYT DCP D +M+ + +++ G +G GD GEPGEKG GK G G G G GP G +F++PLNLG GG AR +FR L H+ ++G RG RG TG GPDG +G G KGE GP GDTGFQG RG GP G G G++G DG+RGD G G KG DG PGDSG G +G KG G G G+ G GE+GPRGP GD+GDQG++G G +G G GP GP G G++GP G +GE G G GLPGP GP+GP GPEG +GPRG+ G G G+QG PG G +G PGY G KG+ G+KGD+G GQ+GD G G RG KG RG KPG GP+GD G G G +G G GL G G GPPG G +G+KG GP G G DGE+G G GP G G G G KGD+G GP GPPGP+G G G SGP G GP+G IG QGP G+PG RGE GE G GP G IG G G GD G +G G +G RG GDPGKDG G G+ G KG G RG G RG GY G DG+PGP GP G KGE G Sbjct: 40 RPGYVV--PRGLEMKKLLADLLPNTDAWRSEMSVFFTTRVKPGNKGELFTIYSSQGRVLLSVGIDGQVVVSHQEAAAGVRAARVSATGSAISSEKLGPSLDDGLWHRVGLNFKDGRVQLAVDCRTPESFKLSLPVAFIDERSTLSLLPNGFDGVIQDLMFVQGDRSLEQQCLIYTPDCPTDGDDAMQNDEVMIVETSEEALGQTAVPFFVLLIYQLFQGERGEQGDPGEPGEKGEPGKPGPRGPDGEPGPAGPTGSLFVVPLNLGVGGGSQARAGHFRQILQQHLESLRGPRGPRGLTGPTGPDGPMGPPGPKGETGPQGDTGFQGRRGPMGPAGLPGPRGKTGRDGDRGDPGPAGPKGPDGLPGDSGLMGPKGPKGPRGPAGPVGETGSPGEEGPRGPTGDAGDQGDMGPYGPRGPPGMQGPHGPRGKTGSRGPVGLQGETGEPGPTGLPGPMGPQGPAGPEGPAGPRGAVGAPGPNGKQGPPGATGPEGRPGYPGPKGEVGLKGDTGPEGQKGDPGLPGPRGVKGTRGMAGAVGPKGDAGKPGAMGVPGDPGPKGLKGSRGVPGTMGLMGPQGEKGEPGKPGDPGPRGDRGVQG------------------------------------PSGLMGPAGPQGLHGDPGPAGPPGPQGREGDKGETGPIGPAGADGEQGQHGAPGPRGLQGKTGPAGE---------------KGDLGATGPAGPPGPIGEMGFQGQSGPSGLPGPAGPIGRQGPQGFPGPRGEPGEIGPPGPRGPIGMTGPVGPAGDTGPEGVPGPVGPRGSAGDPGKDGKDGARGDKGPKGERGNRGPAGPRGPRGYTGLDGLPGPAGPEGFKGETG 846 HSP 3 Score: 68.1662 bits (165), Expect = 2.366e-7 Identity = 53/115 (46.09%), Postives = 61/115 (53.04%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRG------PTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 QGP G G G G PG G GL G G G GDPG G RG G+RG P GD GK G G+ G+PG KG G RG PG G +G +G G PG PG G +G++G Sbjct: 517 KQGPPGATGPEGRPGYPGPKGEVGLKGDTGPEGQKGDPGLPGPRGVKGTRGMAGAVGPKGDAGKPGAMGVPGDPGPKGLKGSRGVPGTMGLMGPQGEKGEPGKPGDPGPRGDRGV 631 HSP 4 Score: 65.4698 bits (158), Expect = 1.563e-6 Identity = 136/394 (34.52%), Postives = 162/394 (41.12%), Query Frame = 2 Query: 2411 GPSGYPGERGETG------EPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPG---------------AKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGN------PGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLM------------------------GEKGENGPMGPI------GEVGVPGLPGLQGEPG 3421 GP+G PG RG+TG +PG GP G G G G G G G RG G G TG PG++G G G+ G +G GPRG G+RG +G +G G PGP G G G QG G GP G +G G G G GP G TG G PG G KG +GL GD GP G GD G GP+G G G G G +G G PG MG G PG KG +G+RG G G++G PG PG+ GP+G++ GVQGP GLM G+KGE GP+GP G+ G PG GLQG+ G Sbjct: 369 GPAGLPGPRGKTGRDGDRGDPGPAGPKGPDGLPGDSGLMGPKGPKGPRGPAGPVGETGSPGEEGPRGPTGDAGDQGDMGPYGPRGPPGMQGPHGPRGKTGSRGPVGLQGETGEPGPTGLPGPMGPQGPAGPEGPAGPRGAVGAPGPNGKQGPPGATGPEGRPGYPGPKGEVGLKGDTGPEGQK------------------------------------GDPGLPGPRGVKGTRGMAGAVGPKGDAGKPGAMGVPGDPGPKGLKGSRGVPGTMGLMGPQGEKGEPGKPGDPGPRGDR------------------------------GVQGPSGLMGPAGPQGLHGDPGPAGPPGPQGREGDKGETGPIGPAGADGEQGQHGAPGPRGLQGKTG 696
BLAST of Collagen F-8 vs. Ensembl Cavefish
Match: col1a2 (collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]) HSP 1 Score: 127.872 bits (320), Expect = 6.271e-29 Identity = 72/250 (28.80%), Postives = 120/250 (48.00%), Query Frame = 2 Query: 4316 EIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILD---QNGNKMRKIKYCPMS-QLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAK--KTEYLPIVDIQLKDFGNDNQKL 5047 E D + + ++ + I L ++++ P GSK NPAR CRDI LS+P TS +WIDPN G D+I+ C F + +TC+ A +S + ++ ++ + W E ++ + G + M+ QL F+++L +A Q VT C + Y D+ N N A+ ++ N D +L++E S ++D C + T S+ I + K LPI+DI D G +Q+ Sbjct: 1108 EYRADQAALRAKDYEVDATIKSLNTQIDNLLSPEGSKKNPARTCRDIRLSHPDWTS-FYWIDPNQGCTMDAIKAFCDF--STGQTCIHAHPES-IPRKNWYRSSQEKKHIWFGETINGGTEFGYNDETLSPQSMATQLAFMRLLANQAVQNVTYHCKNSIAYMDAENGNLKKAVLLQGSN--------DVELRAEGNSRFTFSVLEDGCTLQRHTGQWSKTVIEYRTNKPSRLPILDIAPLDIGGADQEF 1345 HSP 2 Score: 60.8474 bits (146), Expect = 1.525e-8 Identity = 51/114 (44.74%), Postives = 63/114 (55.26%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGL------SGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +G SG PG G G G VGP G G +G PG TG G DG RG G GP G G++GL SG G+PG G +GP G G +G +G +GF+G+PG G G G G+ Sbjct: 766 RGDSGPPGLTGFPGAAGRVGPAGPAGIVGPPGPTGAQGKDGPRGLRGDVGPAGPQGENGLIGPPGLSGEKGSPGESGPMGPPGIAGPQGQLGSQGFNGLPGSRGERGLPGAAGS 879 HSP 3 Score: 60.077 bits (144), Expect = 2.365e-8 Identity = 50/109 (45.87%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +QG +G PG RGE G PG+ G G G +G GS G G G G G GP G+ G++G G DG PG GA G +G G G+ G G G PGP GP+GA G G Sbjct: 858 SQGFNGLPGSRGERGLPGAAGSVGEAGRVGPSGSPGPRGPSGNIGLPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGPLGIAGAPGPLGPSGAVGRPGN 966 HSP 4 Score: 55.8398 bits (133), Expect = 5.590e-7 Identity = 49/112 (43.75%), Postives = 60/112 (53.57%), Query Frame = 2 Query: 2405 NQGPSGYPGE---RGETGEPGSVGPTGLIGS---IGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGE 2722 N GP G PG +G+ GEPGS GP G+ G+ +G G+ G PG+ GE GS G G G G G + G G +G G G G RG G RG G+ G PGPNG G+ Sbjct: 921 NDGPPGRPGAAGIKGDRGEPGSPGPLGIAGAPGPLGPSGAVGRPGNRGEAGSAGPSGAVGPAGARGAPFLQGPSGPRGEKGVAGDKGDRGMKGLRGHPGLQGMPGPNGPSGD 1032 HSP 5 Score: 54.6842 bits (130), Expect = 1.026e-6 Identity = 54/118 (45.76%), Postives = 60/118 (50.85%), Query Frame = 2 Query: 2411 GPSGYPGERGETGE---PGSVGPTGLIGSIGAPGSTGDPGS------DGERGSIGSRGP---TGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GPSG PG RG +G PG GP G G G+PG+ G PG G+RG GS GP G PG G SG G PG +G G G GA G G RG + GP GP G KG G Sbjct: 887 GPSGSPGPRGPSGNIGLPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGPLGIAGAPGPLGPSGAVGRPGNRGEAGSAGPSGAVGPAGARGAPFLQGPSGPRGEKGVAG 1004 HSP 6 Score: 53.1434 bits (126), Expect = 3.123e-6 Identity = 40/86 (46.51%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 3833 GKQGPLGEPGL------SGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGD 4072 G+QGP G PG +GP GE G GDRGI G G+ G GV+G RG GP G+SG +GP+G GP G GP G +G+ Sbjct: 533 GEQGPSGAPGFQGLPGPAGPVGETGKPGDRGIPGDQGVAGPSGVKGERGTPGP------AGASGAQGPIGARGPAGTPGPDGSKGE 612 HSP 7 Score: 53.1434 bits (126), Expect = 3.313e-6 Identity = 51/113 (45.13%), Postives = 57/113 (50.44%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGA------KGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 G +G GE G G GS GP G G+IG PG TG G G GS G+ GP G PG G+ G G PG+ GA GP G GA G G RG G GP G G G +G Sbjct: 875 GAAGSVGEAGRVGPSGSPGPRGPSGNIGLPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGDRGEPGSPGPLGIAGAPGPLGPSGAVGRPGNRGEAGSAGPSGAVGPAGARGA 987 HSP 8 Score: 51.9878 bits (123), Expect = 7.259e-6 Identity = 42/88 (47.73%), Postives = 50/88 (56.82%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 +G GP G G GP G QG G RG++G VG G +G G+ GP G G KG G SG GP G GP+G +G +G G PG GER Sbjct: 784 VGPAGPAGIVGPPGPTGAQGKDGPRGLRGDVGPAGPQGENGLIGPPGLSGEKGSPGESGPMGPPGIAGPQGQLGSQGFNGLPGSRGER 871 HSP 9 Score: 51.9878 bits (123), Expect = 8.100e-6 Identity = 115/335 (34.33%), Postives = 147/335 (43.88%), Query Frame = 2 Query: 1715 TGPVGGRGRQGSPGVPGSDGTPGYAGIKGD---QGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNG 2710 TG G GR G G G G PG G +G +G++GD G G +G++G G G GE+G PG GP G G AG QG LG +G GL G+ G G PG +G GE G GP+G+ G G GN+G+ G G G+ G+ G PG+ G PG G +G+KGD +G G PG G G PG +GP+ G++G PG+ G+ GS G G++G G G P G SG G G G G RG G R G+ G G+PGP GP+G Sbjct: 775 TGFPGAAGRVGPAGPAGIVGPPGPTGAQGKDGPRGLRGDVGPAGPQGENGLIGPPGLSGEKGSPGESGPMGPPGIAG------------------------------------PQGQLGSQGFNGLPGSRGERGLPGAAGSVGEAGRVGPSGSPGPRGPSGNIGLPGMTGPQGEAGREGSPGNDGPPGRPGAAGIKGD------------------------------------RGEPGSPGPLGIAGAPGPLGPS---GAVGRPGNRGEAGSAGPSGAVGPAGARGAPFLQGPSGPRGEKGVAGDKGDRGMKGLR---GHPGLQGMPGPNGPSG 1031
BLAST of Collagen F-8 vs. Ensembl Cavefish
Match: col1a1a (collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]) HSP 1 Score: 126.716 bits (317), Expect = 1.170e-28 Identity = 66/246 (26.83%), Postives = 114/246 (46.34%), Query Frame = 2 Query: 4328 DTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQS-HMKSLTSFKKTENPRQWWLSEILD-----QNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 D N + ++ + + L + + SI+ P G+K NPAR CRD+ + +P SG +WIDP+ G D+I+V C E+ +TCV ++ K+ + K + + W E + + G + K + + QL FL+++ T+A Q +T C + Y D + N A+ ++ N + ++++E S +D C + KT LPI+DI D G NQ+ Sbjct: 1191 DANVMRDRDLEVDTTLKSLSQQIESIRSPDGTKKNPARTCRDLKMCHPDWKSGEYWIDPDQGCNQDAIKVYCNM--ETGETCVYPSQSDIPQKNWYTSKNIKEKKHVWFGEAMTDGFQFEYGGEESKPEDVNI-QLTFLRLMSTEASQNITYHCKNSIAYMDQASGNLKKALLLQGSN--------EIEIRAEGNSRFTYSVTEDGCTSHTGAWGKTVIDYKTTKTSRLPIIDIAPMDVGAPNQEF 1425 HSP 2 Score: 60.8474 bits (146), Expect = 1.372e-8 Identity = 49/100 (49.00%), Postives = 53/100 (53.00%), Query Frame = 2 Query: 2429 GERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GERGE G G G GL G GA G G PG G G G+ GP+G G G G G PG G VG RG+PGA GN G +G G G PG G G QG Sbjct: 613 GERGEQGPAGPPGFQGLPGPQGATGEPGKPGEQGLPGEAGATGPSGSRGDRGFPGERGAPGPAGPVGSRGSPGAAGNDGAKGESGASGAPGAQGPPGLQG 712 HSP 3 Score: 52.7582 bits (125), Expect = 4.650e-6 Identity = 50/112 (44.64%), Postives = 53/112 (47.32%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGID------------------GNPGAKGAVGPRGTPGARGNIGYRGFDGIPG 2692 GP G PGERG PG+VGP G G G G G PGS G GS GS GP G G G +G D G PG KGA G G PG RG +G G G PG Sbjct: 487 GPKGAPGERGG---PGAVGPKGATGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGATGPAGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGAIGVAGAPG 595 HSP 4 Score: 51.9878 bits (123), Expect = 7.393e-6 Identity = 53/128 (41.41%), Postives = 63/128 (49.22%), Query Frame = 2 Query: 2420 GYPGERG---ETGEPGSVGPTGLIGSIGAPGSTGD---------PGSDGERGSIGSRGP------------TGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 G+PG +G E G+PG G G IG GAPG GD G GERG G GP TG+PGK G G+ PG GA GP G+ RG+ G+ G G PGP GP G++G G Sbjct: 565 GFPGPKGAAGEAGKPGERGVMGAIGVAGAPGKDGDVGAPGAPGAAGPSGERGEQGPAGPPGFQGLPGPQGATGEPGKPGEQGL---PGEAGATGPSGS---RGDRGFPGERGAPGPAGPVGSRGSPGA 686
BLAST of Collagen F-8 vs. Ensembl Cavefish
Match: col11a2 (collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]) HSP 1 Score: 125.946 bits (315), Expect = 2.427e-28 Identity = 64/240 (26.67%), Postives = 122/240 (50.83%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLS-------EILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKN-HDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L + + +++ P+G+K +PAR C+D+ LS P+ T +WIDPN G DS +V C F +TC+ +K+ + S+ K E P W+ +D NG + + Q+ FL++L +A Q +T C+ + + DS + N + A+ N+ I + +K+ + D C R + + +I+ + E LP++D+++ DFG +NQK Sbjct: 1563 MEEVFGSLNSLRQEIEAMRFPLGTKDSPARTCQDLLLSQPEYTD-EYWIDPNQGCTRDSFKVYCNFTAGG-ETCLYPSKEVENVKMNSWPK-EKPGTWYSRFAKGSKMSYVDSNGEPVGVV------QIGFLRLLSLQARQNLTYHCHHSVAWADSTSGNGYQRALHFLGSNEEEISYETNPYIKA----------LSDGCSYR-KGYDRTVLEINTPQVEQLPLLDMKITDFGENNQKF 1782 HSP 2 Score: 78.5666 bits (192), Expect = 7.336e-14 Identity = 63/259 (24.32%), Postives = 106/259 (40.93%), Query Frame = 2 Query: 221 IIKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPF-IQTQTGMCSMP---GSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHF----REPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQ--MAEVIPLTR----EIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNT 955 I K +GM L SL + ++T + + D+L+ +++ P +Q G C+ + Y + +A + + +F + +FSI+ K + S+ + G L ++GR V + R P + L D WHR+A+SV + L +DC+ M + +P + + I V G L + + G IQ L I +AAY CE Y+ DC + Q D NT Sbjct: 3 IRKKRRPWGME----LISLGLMTITLALCELPQAQAEPVDVLRVMQLNSLPEGVQKVPGFCTSRRAGTADHAYRITKKAQISAPTKQLFS--RFPENFSIMALVKAKPGLQAFLLSIYNEQGVQQLGLELGRSPVFLYEDQSRMPAPEDYPLFTGINLAD-GWHRIAISVQKKNVTLLLDCKKRMTKALPRSNKPVLDTKGITVFGARLLDEEVFQGDIQQLLIASNPQAAYDFCEHYSPDC---DSPLPKVQAQDPNT 251 HSP 3 Score: 59.3066 bits (142), Expect = 4.235e-8 Identity = 46/97 (47.42%), Postives = 54/97 (55.67%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPG 2701 G +G G+RG G PG G G G+ GA G G PG DGERG G GP G PG+ PG +G +GP+G PG G+ G RG DG PGP G Sbjct: 570 GETGIKGDRGFDGLPGLPGDKGYRGNNGAMGPVGPPGEDGERGDDGDVGPRGLPGE---------PGPRGLLGPKGPPGIAGSQGVRGSDGPPGPKG 657 HSP 4 Score: 57.3806 bits (137), Expect = 1.699e-7 Identity = 47/110 (42.73%), Postives = 60/110 (54.55%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGT---PGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QG +G PGE+G TG+PG G G G G PG G G+ G +G G +G G PG G+ G+ G G KG G +G PG +G+ G +G G G PGP G G +G Sbjct: 683 QGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEG 792 HSP 5 Score: 55.8398 bits (133), Expect = 5.385e-7 Identity = 45/101 (44.55%), Postives = 57/101 (56.44%), Query Frame = 2 Query: 2426 PGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 PG +G TG PG GPTG G G PG+ G PG G+ G G++ G+ G G G G PG +G G +G G +G+ G +G DG PG G G KGE+G Sbjct: 680 PGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTK---GNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERG 777 HSP 6 Score: 55.8398 bits (133), Expect = 5.431e-7 Identity = 40/99 (40.40%), Postives = 52/99 (52.53%), Query Frame = 2 Query: 980 MGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGND-----VARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPG 1261 +G+PGE+G GK GL G G PGP G ++P G G D A++A + L + +KG G G TG PGP G+ G G KGE+G PG Sbjct: 442 VGDPGERGPPGK---AGLPGADGVPGPPGTSVMLPFRFGQSGGDKGPAVSAQEAQAQAILSQARLALKGPPGPMGFTGRPGPLGTPGSNGLKGESGDPG 537 HSP 7 Score: 54.6842 bits (130), Expect = 1.208e-6 Identity = 43/89 (48.31%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 3833 GKQGPLGEPG---LSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGE 4090 GK+GP G G SGPQG G G RGIKG GI+G+KG +G +G G G+KG+ G G+ G +G GP+G GP G +G G GE Sbjct: 714 GKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEGPKGRVGPPGE 802 HSP 8 Score: 54.6842 bits (130), Expect = 1.239e-6 Identity = 52/133 (39.10%), Postives = 59/133 (44.36%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGD---------------------------PGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GP G PGE G G G GP G+ GS G GS G PG G G G +GPTG PG G+ G DG PG G GP GT G +G G +G G PGP G G +G +G Sbjct: 618 GPRGLPGEPGPRGLLGPKGPPGIAGSQGVRGSDGPPGPKGNLGPQGEPGPPGQQGGPGTQGMPGPQGATGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRG 750 HSP 9 Score: 54.6842 bits (130), Expect = 1.260e-6 Identity = 60/163 (36.81%), Postives = 78/163 (47.85%), Query Frame = 2 Query: 3020 MGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPG---------------------FKGPEGTRGSTGNPGDQ---GMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGE---VGVPGLPGLQGEPGTK 3427 GP G GP G PGLPG+ G+ G PG G+ GP G KG +G RG G+ G++ G PG+ G+ G +GE+G+ G+PG G G +GP G +G GE G +GP+GE +GVPGLPG G G K Sbjct: 686 TGPPGEKGPTGKPGLPGMPGADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGE------------------VGVPGPRGEDGPEGPKGRVGPPGEIGSLGPVGEKGKLGVPGLPGYPGRQGPK 830 HSP 10 Score: 53.5286 bits (127), Expect = 2.557e-6 Identity = 49/125 (39.20%), Postives = 64/125 (51.20%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSG------------------IDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G+PG+ G +G G+ GP+G GSIG PG G G G RG G +G G+ G G+ G DG G KG VGP G G+ G +G +G G+PG PG G +G +G+ Sbjct: 708 GPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEGPKGRVGPPGEIGSLGPVGEKGKLGVPGLPGYPGRQGPKGS 832 HSP 11 Score: 51.9878 bits (123), Expect = 6.962e-6 Identity = 46/108 (42.59%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGP---QGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQ---------------GLKGEIGSSGKEGPMGED---GPKGAIGPRGQRGDPGLAGER 4093 G GP G PG GP +G QGP+G +G G G +G+KGV+G+RG +G + G+KGE G G GP GED GPKG +GP G+ G G GE+ Sbjct: 705 GADGPPGHPGKEGPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEGPKGRVGPPGEIGSLGPVGEK 812 HSP 12 Score: 51.9878 bits (123), Expect = 7.323e-6 Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 1718 GPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTR---GYKGERGKPGGFGPKGDIGKAG 1936 GP G +G QG G GS G PG GIKG QG++G GH G++G+DG G + G KGERG+ G GP+G+ G G Sbjct: 717 GPSGTKGNQGPSGPQGSIGYPGPRGIKGVQGIRGLKGHKGEKGEDGFPGIKGDFGVKGERGEVGVPGPRGEDGPEG 792
BLAST of Collagen F-8 vs. Ensembl Cavefish
Match: col5a1 (procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-041105-6]) HSP 1 Score: 124.79 bits (312), Expect = 4.993e-28 Identity = 60/239 (25.10%), Postives = 113/239 (47.28%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWW-------LSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L+ + ++ P+G++SNPAR C+D+ L +P +WIDPN G DS +V C F ++C+ K+S + + K ++P W+ + D GN + + Q+ FL++L A Q +T C ++ ++D ++D AIR ND + + +++ L+ + + +I+ K E +P VDI DFG QK Sbjct: 1179 MEEIFGSLNSLKLEIEQMKHPLGTQSNPARTCKDLQLCHPDFPD-EYWIDPNQGCSRDSFKVYCNF-TAGGESCIYPDKKSDGSKMARWPK-DSPGTWYSRYKRGSMLSYADAEGNPIGVV------QMTFLRLLSASARQNLTYNCYQSVAWHDQDLDSYDKAIRFLGSNDEEMSYDNNPYIRAAVDGCALKKGYEKTVL-----------EINTPKVEQVPFVDIMFNDFGGATQKF 1397 HSP 2 Score: 56.9954 bits (136), Expect = 2.549e-7 Identity = 51/126 (40.48%), Postives = 64/126 (50.79%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGS----------TGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGT---------PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 G G+PG+ G +GE G++GP G G IG PG GD G G+RG +G+ GP G+ G +G G G PG G +GP G PG G G +G G G PG NG KG +GT Sbjct: 342 GEKGHPGKEGPSGEKGNMGPPGAQGPIGYPGPRGGEDGFTGFKGDMGIKGDRGELGAAGPRGEDGPEGPKGRSGLPGDAGPLGPTGEKGKLGVPGLPGYPGRQGPKGSQGFQGFPGANGEKGTRGT 467 HSP 3 Score: 55.0694 bits (131), Expect = 9.340e-7 Identity = 55/123 (44.72%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 2408 QGPSGYPGERGE----TGEPGSVGPTGLIGSIGAPGSTGDPGSDGERG------SIGSRGPTGDPGKDGLSGIDGNP---GAKGAVGPRGTPGARGNIGYRGFDGIPGP---PGPNGAKGEQG 2728 QGP GYPG RG TG G +G G G +GA G G+ G +G +G G GPTG+ GK G+ G+ G P G KG+ G +G PGA G G RG G PGP GP G +GE+G Sbjct: 365 QGPIGYPGPRGGEDGFTGFKGDMGIKGDRGELGAAGPRGEDGPEGPKGRSGLPGDAGPLGPTGEKGKLGVPGLPGYPGRQGPKGSQGFQGFPGANGEKGTRGTAGKPGPRGQRGPTGPRGERG 487 HSP 4 Score: 54.299 bits (129), Expect = 1.365e-6 Identity = 49/100 (49.00%), Postives = 56/100 (56.00%), Query Frame = 2 Query: 2429 GERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTP------GARGNIGYRGFDGIPGPPGPNG 2710 GE GE G G GP G +G G PG G GSDG RG G GP GD G DGL+G+ G G +G GP+G P G RG+ G G G+PG PGP G Sbjct: 183 GESGEQGTQGPRGPMGSLGPPGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGETGPQGPPGPSGEDGERGDDGEVGPRGLPGEPGPRG 282 HSP 5 Score: 51.6026 bits (122), Expect = 9.570e-6 Identity = 42/96 (43.75%), Postives = 53/96 (55.21%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGL---------KGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G+ GP G G SG G+ GP G G KG +G+ G+ G G +GP+G QG KG G++GK GP G+ GP G G RG RG G AG + Sbjct: 403 GEDGPEGPKGRSGLPGDAGPLGPTGEKGKLGVPGLPGYPGRQGPKGSQGFQGFPGANGEKGTRGTAGKPGPRGQRGPTGPRGERGPRGPTGKAGPK 498
BLAST of Collagen F-8 vs. Ensembl Cavefish
Match: col11a2 (collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]) HSP 1 Score: 120.939 bits (302), Expect = 1.371e-27 Identity = 65/240 (27.08%), Postives = 121/240 (50.42%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLS-------EILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKN-HDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +++++ +++ L + + +++ P+G+K +PAR C+D+ LS P+ T G +WIDPN G DS +V C F +TC+ +K+ M S E P W+ +D NG + + Q+ FL++L +A Q +T C+ + + DS + N + A+ N+ I + +K+ + D C R + + +I+ + E LP++D+++ DFG +NQK Sbjct: 345 MEEVFGSLNSLRQEIEAMRFPLGTKDSPARTCQDLLLSQPEYTDGEYWIDPNQGCTRDSFKVYCNFTAGG-ETCLYPSKEVKMNSWPK----EKPGTWYSRFAKGSKMSYVDSNGEPVGVV------QIGFLRLLSLQARQNLTYHCHHSVAWADSTSGNGYQRALHFLGSNEEEISYETNPYIKA----------LSDGCSYR-KGYDRTVLEINTPQVEQLPLLDMKITDFGENNQKF 562
BLAST of Collagen F-8 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003197.1 (pep scaffold:Pmarinus_7.0:GL479090:2162:37629:-1 gene:ENSPMAG00000002618.1 transcript:ENSPMAT00000003197.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 129.028 bits (323), Expect = 4.122e-30 Identity = 64/231 (27.71%), Postives = 110/231 (47.62%), Query Frame = 2 Query: 4358 KLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGN-KMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 +L ++I L + ++ P GS+ NPAR CR++ L P + SG +WIDPN GS +D+I+V C E+ ++C++A S + K + + + W + + + + QL FL++ T+A Q +T C + Y D N A+ ++ N + ++++E S L ++D C + + KT LPIVDI KD G +Q+ Sbjct: 957 ELEASISSLNVRVENMVSPDGSQKNPARTCRNLKLCYPDLPSGLYWIDPNEGSKSDAIQVWCNM--ETGESCMNADNPSIARKNWWLKPSGSKKHVWFGVTMSPDAQFTYGEDSHSTEIQLTFLRLFSTEASQKITYHCKNSVAYQDGAVGNLQQALLLQGSN--------EMEIRAEGNSKLAYSVLEDGCTMHTGQWGKTVIEYRTPKTSRLPIVDIAPKDVGGPDQEF 1177 HSP 2 Score: 55.8398 bits (133), Expect = 1.022e-7 Identity = 47/103 (45.63%), Postives = 56/103 (54.37%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 G PG+RGE G G G G G G G +G+ GS G G++GS G GD G+DG +G DG PG G GP+G G GN G G G GP G G+ G G Sbjct: 712 GLPGQRGERGFSGPAGLVGEAGKQGPVGPSGERGSAGPAGAMGSAGSPGDSGRDGAAGADGLPGRDGPQGPKGDRGPPGNAGPAGAPGASGPSGQAGSPGRTG 814 HSP 3 Score: 53.9138 bits (128), Expect = 3.750e-7 Identity = 50/106 (47.17%), Postives = 59/106 (55.66%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGL---SGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 G PG+ G G GS GP+GL GS G G PG GERG G G G+ GK G SG G+ G GA+G G+PG G G G DG+PG GP G KG++G Sbjct: 685 GAPGDDGPVGAEGSPGPSGLAGSRGV---VGLPGQRGERGFSGPAGLVGEAGKQGPVGPSGERGSAGPAGAMGSAGSPGDSGRDGAAGADGLPGRDGPQGPKGDRG 787 HSP 4 Score: 51.2174 bits (121), Expect = 2.750e-6 Identity = 41/88 (46.59%), Postives = 45/88 (51.14%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 GKQGP+G G G G G G G G G G G +G+ G GPQG KG+ G G GP G GA GP GQ G PG GER Sbjct: 732 AGKQGPVGPSGERGSAGPAGAMGSAGSPGDSGRDGAAGADGLPGRDGPQGPKGDRGPPGNAGPAGA---PGASGPSGQAGSPGRTGER 816
BLAST of Collagen F-8 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001576.1 (pep scaffold:Pmarinus_7.0:GL476350:400893:424819:1 gene:ENSPMAG00000001417.1 transcript:ENSPMAT00000001576.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 126.331 bits (316), Expect = 1.425e-29 Identity = 72/240 (30.00%), Postives = 114/240 (47.50%), Query Frame = 2 Query: 4340 IISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMS----QLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 + + LK L + ID SI+ P GS+ NPAR CRD+ L +P+ SG+++IDPN G D+I+V C ES +TCV A+ Q+ + K+++ + W E ++ P + Q+ FL++L T+A Q +T C + Y D N A+ ++ ND I ++E S ++D C + + +KT LPIVDI D G +Q+ Sbjct: 512 VDATLKSLTNQID-------SIRSPEGSRKNPARTCRDLKLCHPEWKSGDYFIDPNQGCTLDAIKVFCNM--ESGETCVYASPQNVPRKSWWTNKSKDRKHIWFGETMNSGSQFNYGDDSLPPNTAAIQMTFLRLLSTEASQNITYHCKNSIAYMDEQAGNLKKALLLQGSNDIEI--------RAEGNSRFTYNVLEDGCTKHTGDWGQTVLEYRTQKTSRLPIVDIAPLDIGGVDQEF 734 HSP 2 Score: 58.9214 bits (141), Expect = 1.087e-8 Identity = 42/87 (48.28%), Postives = 52/87 (59.77%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGS---RGPTGDPGKDGLSGIDGNPGAKGAVGPRGT---PGARGNI 2662 G PGERGETG PG G G GS G PG+ G+ G G++G G+ +GP G PG G +G+ G GA+GA GP G PGA G + Sbjct: 76 GSPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGESGQKGDAGAPGPQGPAGSPGPQGPNGVPGPKGARGAQGPSGATGFPGAAGRV 162 HSP 3 Score: 49.2914 bits (116), Expect = 9.306e-6 Identity = 54/140 (38.57%), Postives = 57/140 (40.71%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERG---------------------------------SIGSRGPTGDPGKDGLS---GIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 G PGERG G PG P G G G G G PG DG RG S G RG TG PG G + G DG PGAKG G G G G G +G G PGP GPNG G +G Sbjct: 7 GMPGERGTAGAPG---PKGDRGDGGEKGPEGAPGKDGSRGLTGPIGPPGPSGSAGDKGEAGPPGPTGPAGTRGSPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGESGQKGDAGAPGPQGPAGSPGPQGPNGVPGPKGA 143
BLAST of Collagen F-8 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001071.1 (pep scaffold:Pmarinus_7.0:GL476837:726:42204:1 gene:ENSPMAG00000000855.1 transcript:ENSPMAT00000001071.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 126.331 bits (316), Expect = 3.245e-29 Identity = 66/233 (28.33%), Postives = 107/233 (45.92%), Query Frame = 2 Query: 4361 LYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTS--GNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCP--MSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 L ++I L + SI P GS+ +PAR CRD+ L +P+ S G +WIDPN G D+I+V C E+ ++CV+ S + + + + WL E + G++ P QL FL++L T A Q +T C + Y DS N A+ ++ D ++++E S ++D C + + +KT LP +DI D G +Q+ Sbjct: 1044 LDASIKALNAQVESITSPDGSRKHPARSCRDLMLCHPEYKSDTGEYWIDPNEGCRADAIKVWCNM--ETGESCVNPGMPSLPRKNWWRSQAADKKHVWLGETMSP-GSQFTYGDGSPNMEVQLTFLRLLSTDASQKITYHCKNSVAYLDSRAGNLKKAL--------MLQGSSDVEIRAEGNSRFTYSVLEDGCTTHTGVWGKTVIEYRTQKTSRLPFMDIAPMDVGGSDQEF 1265
BLAST of Collagen F-8 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009617.1 (pep scaffold:Pmarinus_7.0:GL476473:139194:170406:1 gene:ENSPMAG00000008685.1 transcript:ENSPMAT00000009617.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 117.472 bits (293), Expect = 1.149e-26 Identity = 61/239 (25.52%), Postives = 108/239 (45.19%), Query Frame = 2 Query: 4358 KLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMS----QLVFLQMLHTK-----AEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 ++ ++I L + ++ P G++ NPAR CRD+ L +P+ SGN+WIDPN G D+++V C E+ +TCV A Q+ + K+ + + W E + + P + Q+ FL++L + A +T C + Y D N A+ ++ N D ++++E S ++D C + + +KT LP VD+ D G +Q+ Sbjct: 654 EVDASIKSLSGQIEGLRSPEGTRKNPARTCRDLKLCHPEWESGNYWIDPNQGCTLDALKVFCNM--ETGETCVYANPQTISRKNWWQSKSADRKHVWFGEAMSGGLHFNYGDDNLPANTAAIQMTFLRLLSMEAYDLPAAANITYHCKNSIAYMDEETGNLKKALLLQGSN--------DMEIRAEGNSRFTYNVLEDSCTKHTGEWGRTVVEYRTQKTSRLPFVDVAPMDVGGPDQEF 882 HSP 2 Score: 66.2402 bits (160), Expect = 6.021e-11 Identity = 54/118 (45.76%), Postives = 67/118 (56.78%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGS---RGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIG---------YRGFDGIPGPPGPNGAKGEQG 2728 G G PGERGETG PG G G GS G PG+ G+ G G++G G+ +GP+G PG G +G+ G GA+GA GP PGAR G ++G G PGP GPNG G +G Sbjct: 215 GARGAPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGETGQKGDAGAPGPQGPSGAPGPQGPNGVSGPKGARGAQGP--PPGARALCGPAVDVAPVPFQGNPGSPGPAGPNGKDGPKG 330 HSP 3 Score: 49.6766 bits (117), Expect = 6.957e-6 Identity = 58/158 (36.71%), Postives = 67/158 (42.41%), Query Frame = 2 Query: 2417 SGYPGERGETGEPGSVGPTGLIGSIGAPGS---------------------------------TGDPGSDGERGSIGSRGPTGDPGKDGLSGI---------------DGNPGAKGAVGP---RGTPGARGNIGYRGFDGIPGPPGPN---GAKGEQG 2728 SG GERG GE G+ GP GL G+ G PG+ TG G+ G+RG G +GP G PGKDG G+ G+ G G GP RG PG RG G G G GPPG + GAKGEQG Sbjct: 94 SGARGERGFPGERGAPGPQGLQGARGLPGTPGTDGPKGATGPGGPPGAQGPPGLQGMPGERGATGISGAKGDRGDSGEKGPEGAPGKDGGRGVTGPIGPPGPAGAHGDKGDAGPAGPTGPSGARGAPGERGETGPPGPAGFAGPPGSDGQPGAKGEQG 251 HSP 4 Score: 49.6766 bits (117), Expect = 7.701e-6 Identity = 49/103 (47.57%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 G G +GE GE G+ G G GS GAPG G G +G RG G +GP G PG G G+ G G +G G G G RG G+RGF G+ G PGP G+ G+QG Sbjct: 450 GAAGAKGERGEAGAAGQPGAPGSPGAPGPVGPTGKNGARGDQGPQGPMGPPGPSGARGLPGPQGPRGDKGETGEAGERGIKGHRGFTGLQGLPGPPGSSGDQG 552 HSP 5 Score: 49.2914 bits (116), Expect = 9.357e-6 Identity = 53/114 (46.49%), Postives = 59/114 (51.75%), Query Frame = 2 Query: 2408 QGPSGYPGE---RGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLS---GIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +GP G PG+ RG TG G GP G G G G G G G RG+ G RG TG PG G + G DG PGAKG G G G G G +G G PGP GPNG G +G Sbjct: 172 KGPEGAPGKDGGRGVTGPIGPPGPAGAHGDKGDAGPAGPTGPSGARGAPGERGETGPPGPAGFAGPPGSDGQPGAKGEQGETGQKGDAGAPGPQGPSGAPGPQGPNGVSGPKGA 285
BLAST of Collagen F-8 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005318.1 (pep scaffold:Pmarinus_7.0:GL477895:43798:56979:-1 gene:ENSPMAG00000004829.1 transcript:ENSPMAT00000005318.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 106.686 bits (265), Expect = 1.063e-23 Identity = 64/243 (26.34%), Postives = 108/243 (44.44%), Query Frame = 2 Query: 4349 ILKKLYSNID----KLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSAT-KQSHMKSLTSFKKTENPRQWWLSEILD-----QNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 LK+ + +D L + +I P G+K++PAR CRD+ L + SG +WIDPN GS+ D+++V C E+ +TCV K K+ S K + + W E + G+ + QL FL+++ +A Q +T +C + Y D+ + A+R+ + +L+++ + ++D C + Q K LPIVDI D G Q+ Sbjct: 371 ALKEHDAEVDVTLKSLTNQLENIMSPEGTKTDPARSCRDLMLCHSDWKSGEYWIDPNEGSVLDAMKVWCNM--ETGETCVYPKPKNVPSKNWWSNKGSREHKHVWFGEAMPGGFHFSYGDDTMSANIAEV-QLNFLRLVAAEASQNITYLCRNSVAYADAAG-SLRKAVRLMGSG--------ELELRADGKNRFTYSMLEDGCAKHTGEWGKTVLQYKTNKPSRLPIVDIAPLDIGGPEQEF 601 HSP 2 Score: 58.151 bits (139), Expect = 1.677e-8 Identity = 49/110 (44.55%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDP---GSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G G PG G TG G GPTG G GAPG+ G P G+ GE G GS G G G+DGL+G+ G+ G G G G PG GN G G +G G G G +G+ G Sbjct: 115 RGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSG 224 HSP 3 Score: 56.6102 bits (135), Expect = 4.215e-8 Identity = 49/114 (42.98%), Postives = 60/114 (52.63%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPR------GTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 + G G G+RGE G PG GPTG +G G G G+ G+ G GS G G G+ G++G SG DG G G G R GTPG GN G G G+ G G +G +GE G Sbjct: 105 SHGIQGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETG 218 HSP 4 Score: 56.225 bits (134), Expect = 5.586e-8 Identity = 53/113 (46.90%), Postives = 60/113 (53.10%), Query Frame = 2 Query: 2408 QGPSGYPGERGETG---EPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIP---GPPGPNGAKGEQG 2728 QG G G RG+TG EPG GPTGL+G+ G G G G+ G G+ GS G G G GLSG G G G GP G+ G G G +G G P G PG NGA GE G Sbjct: 49 QGKDGSMGPRGDTGTPGEPGEPGPTGLLGNQGERGERGPSGTRGTAGAPGSSGFLGSHGIQGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESG 161 HSP 5 Score: 55.8398 bits (133), Expect = 7.792e-8 Identity = 44/98 (44.90%), Postives = 55/98 (56.12%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPG 2701 G G G RG+ GEPG+ G G G++G PG +G G DG RG G +G +G G+ G +G G G GA G RG G RG G+RG+ G G PG Sbjct: 172 SGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAGPLGPQGPNGAHGERGDSGERGIKGHRGWSGFQGLPG 269 HSP 6 Score: 55.4546 bits (132), Expect = 1.164e-7 Identity = 50/115 (43.48%), Postives = 60/115 (52.17%), Query Frame = 2 Query: 2405 NQGPSGYPGERGET------GEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 + G G PGE G T GE G GP+G G+ GAPGS+G GS G +G G RG G PG +G +G G G G G RG P GN+G G +G PG G G+ G G Sbjct: 60 DTGTPGEPGEPGPTGLLGNQGERGERGPSGTRGTAGAPGSSGFLGSHGIQGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAP---GNVGSPGLNGAPGESGREGSSGTDGA 171 HSP 7 Score: 55.0694 bits (131), Expect = 1.357e-7 Identity = 51/116 (43.97%), Postives = 57/116 (49.14%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIP---------GPPGPNGAKGEQG 2728 GP+G GERG G GS G G G G GS+G G+ G G G RG G+PG G G GN G G G G G RG G +G GI GP GPNGA GE+G Sbjct: 133 SGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAGPLGPQGPNGAHGERG 248 HSP 8 Score: 51.9878 bits (123), Expect = 1.174e-6 Identity = 46/108 (42.59%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 +GPSG G G G G +G G+ G G G G PG +G GS+G GPTG+ G+ G G G+PG GA G G G+ G G G DG+ G G +GE GT Sbjct: 85 RGPSGTRGTAGAPGSSGFLGSHGIQGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGRDGL---AGVRGDRGEPGT 189 HSP 9 Score: 51.2174 bits (121), Expect = 2.263e-6 Identity = 41/91 (45.05%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGG------VGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAG 4087 G+ GP G G G +GE+GP+G RG G +G G++G+ G RG +G GL G GS GK GP GE G +GA G G PGL G Sbjct: 68 GEPGPTGLLGNQGERGERGPSGTRGTAGAPGSSGFLGSHGIQGLSGQRGERGVPGLNGPTGSLGKSGPTGEQGERGAP---GNVGSPGLNG 155 HSP 10 Score: 50.447 bits (119), Expect = 3.971e-6 Identity = 69/202 (34.16%), Postives = 82/202 (40.59%), Query Frame = 2 Query: 3023 GPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGAKGVQGIVGEDGPIGQPGNPGRQG 3628 G G GP G G PG G PG G +G G G +GP GTRG+ G PG G G G G G++G+R G G+ GP G +G+ G G G G G G PGL G PG G +GS G G G +G GV+G GE G G+PGNPG G Sbjct: 50 GKDGSMGPRGDTGTPGEPGEPGPTGLLGNQGERGERGPSGTRGTAGAPGSSGFLGSHGIQGLSGQRGER------------------------GVPGLNGPTGSLGKSGPTGEQGERGAPGNVGSPGLNGAPGESGREGSSGTDGASGR---------------------------DGLAGVRGDRGEPGTPGRPGNPGNMG 200 HSP 11 Score: 49.6766 bits (117), Expect = 5.537e-6 Identity = 40/103 (38.83%), Postives = 52/103 (50.49%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGV------------------RGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAG 4087 G GPLG G +G GE+G +G+RGIKG G G +G+ G+ RGP GP G +G+ G +G+ GP +GP G RG PG AG Sbjct: 230 GSAGPLGPQGPNGAHGERGDSGERGIKGHRGWSGFQGLPGLPGPHGHQGGPGINGGSGPRGPTGPAGGRGKDGHNGQAGP---------LGPSGHRGRPGEAG 323 HSP 12 Score: 49.2914 bits (116), Expect = 7.029e-6 Identity = 39/95 (41.05%), Postives = 50/95 (52.63%), Query Frame = 2 Query: 3827 SMGKQGPLGEPGLSGPQGEQGPTG------DRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 S G G G GL+G +G++G G + G G G+ G G +G RG GPQG G +G G GP+G GP GA G RG G+ G+ G R Sbjct: 165 SSGTDGASGRDGLAGVRGDRGEPGTPGRPGNPGNMGNPGLSGANGKDGHRGETGPQGDSGIVGRPGSAGPLGPQGPNGAHGERGDSGERGIKGHR 259
BLAST of Collagen F-8 vs. Ensembl Nematostella
Match: EDO42953 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S046]) HSP 1 Score: 144.05 bits (362), Expect = 2.179e-34 Identity = 82/268 (30.60%), Postives = 130/268 (48.51%), Query Frame = 2 Query: 4247 VNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKY-CPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 V G ++ A +++ K K +NP + + ++K+E ++N+I++P G K+NPA+ C+D+ + +P SG +WIDPN GS D+I V C F + +C+S TK + + N + WLSE ++ +I Y SQ+ FL++ +A Q VT C Y N+ H +I++R ND I H K + L E KDD + + I K+ LPIVD+ L DFG +QK+ Sbjct: 1157 VEKGPGYRLYAGSKDAK-KPDNPSV------------SFMTALEKMEIDVNTIRKPTGMKNNPAKTCKDLRMDHPDYVSGYYWIDPNEGSKKDAIRVYCDFSNDF--SCISPTKAKLLN--LRVQANVNKKDKWLSEAFEEE----SQIDYSAEQSQIAFLRVFSKRAYQNVTYNCQN---YKAWTNRKH--SIKLRGDNDLIF--HAKSPKKFQPTVILNECTTKDDQWHK------TILAIDTKQKHRLPIVDMALFDFGKPHQKV 1390 HSP 2 Score: 58.9214 bits (141), Expect = 2.433e-8 Identity = 52/131 (39.69%), Postives = 61/131 (46.56%), Query Frame = 2 Query: 3020 MGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQG 3412 GPQGP G G GL G +G PGV G G G PG +GP G +G G PG QG PG+PG+ G G +G+R G G G MGE+G G GP G G G PG +G Sbjct: 560 TGPQGPAGAKGESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGER---------------------------GTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRG 663 HSP 3 Score: 55.4546 bits (132), Expect = 2.311e-7 Identity = 50/106 (47.17%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GPSG G +G GEPG G TG G GA G +G GS G G G G G+PG+ G G G GA G GP G PG G G RG G G PG G +G QG Sbjct: 540 GPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQG 645 HSP 4 Score: 53.1434 bits (126), Expect = 1.259e-6 Identity = 60/139 (43.17%), Postives = 67/139 (48.20%), Query Frame = 2 Query: 2411 GPSGYPGERGETGE---PGSVGPTGLIGSIGAPGSTGDPGSDGERGS---------IGSRGP------------TGDPGKDGLSGIDGNPGA---------KGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GP G PG RG TG PG+ GP G G G+PG+ G PGS G++GS +G RGP TG PG DG G G PG G GP G GA+G G G DG GP GP GAKGE G Sbjct: 435 GPIGDPGSRGATGPRGFPGAAGPNGRKGEQGSPGAAGFPGSKGDKGSSGKNGEPGRVGLRGPPGQPGSPGREGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESG 573 HSP 5 Score: 52.7582 bits (125), Expect = 1.490e-6 Identity = 60/136 (44.12%), Postives = 68/136 (50.00%), Query Frame = 2 Query: 3017 FMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGT 3424 G G GP GSPGLPG +GS G G GE G PG G G RG++G PG G+ G G G QGEKG+ G +GPPG PG L G+KGE G +G G VG PG PG G PG Sbjct: 148 IKGSNGAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAGRRGASGPPGSPGIDGFSGAPGEQGEKGEAGPSGPPGFPG------------------------LKGQKGEEGNLGERGMVGRPGRPGFDGAPGA 259 HSP 6 Score: 52.373 bits (124), Expect = 2.252e-6 Identity = 51/138 (36.96%), Postives = 64/138 (46.38%), Query Frame = 2 Query: 2420 GYPGERGETGEPGSVGPTGLIGSIGAPGSTGDP---------------GSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTP-------------------GARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 G G+ G GEPG GP G G GAPG+ G P G+DG+ G++G RGP G+ G GL+G G PG +G+ G GTP G GN G G G+PG G GA G +G+ Sbjct: 582 GVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPVSKHEFIRYFAIIGEPGAQGPSGNPGTPGRQGMPGASGRRGAPGAKGS 719 HSP 7 Score: 51.9878 bits (123), Expect = 2.688e-6 Identity = 137/383 (35.77%), Postives = 154/383 (40.21%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAV------------GPRGTPGARGNIGYRGFDG---IPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTR------------GSTGNPGD------------------QGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPG 3421 QG G PG G G PG+ GL G GA GS G PG+ G +G G +G G G DG G G PG KGA+ GP G PG GN G G +G PG PG G+KGE+G++G G G +G G G +G IG G GPIGD G G G +GF G GPNG G G PG G PG GD G G G G G R G TG PGD QGM G+PG G G KG G+ G G G GP G G G G G+ G G G GE G GP+G G G PG QG PG Sbjct: 287 QGVRGAPGNEGARGLPGN---PGLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGIRGPSGAPGITGNPGATGINGDRGAPGRPGKIGSKGEKGSEGPNGSPGPRGAPGPPGK---------------------RGKIGRVGPMGPIGDP------------------------------GSRGATGPRGFPGAAGPNGRKGEQGSPGAAGFPGSKGDKGSSGKNGEPGRVGLRGPPGQPGSPGREGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPG 615 HSP 8 Score: 51.6026 bits (122), Expect = 3.209e-6 Identity = 50/117 (42.74%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 2408 QGPSGYPGERGET---GEPGSVGPTGLIGSIGAP---GSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGP---PGPNGAKGEQGT 2731 +G +G PG+ G+T G G+ G +GL GS G P G G+ G GERG +G +GP G PG G G+ G G G G RGT G G +G RG G GP GP G G++G+ Sbjct: 548 KGANGEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGS 664 HSP 9 Score: 51.2174 bits (121), Expect = 5.188e-6 Identity = 53/128 (41.41%), Postives = 63/128 (49.22%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAP------GSTGDPG---------------SDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +GP+G PGE G GEPG G G G G P GS G+PG ++GE G G++G GD GKDG G G G G G +G G RG G +GF G G PG G +GEQG Sbjct: 975 RGPTGQPGENGLPGEPGKPGINGTNGRGGIPGLKGERGSPGEPGKAGKQGPPGPSGPLGANGEPGVQGAKGARGDDGKDGKQGPAGPQGPNGPQGDKGNRGPRGEKGDKGFTGSDGSPGAPGQQGEQG 1102 HSP 10 Score: 50.8322 bits (120), Expect = 5.412e-6 Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGP---------TGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G +G PG+ G+ G+PG+ G TG+ G G G+ G G G+ G G +GP G G+ GL+G G PG G G G PG RG +G +G G PG GP G G+ G Sbjct: 506 EGKTGLPGDDGQDGKPGAPGKPDRLSLQGMTGMPGPSGVAGAKGANGEPGKDGDTGPQGPAGAKGESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPGKTG 621 HSP 11 Score: 50.8322 bits (120), Expect = 6.625e-6 Identity = 55/139 (39.57%), Postives = 62/139 (44.60%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVG---PTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNP-------------GAKGAVGPRGTPG---------------ARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 QGP G PG +G G PG G P G G+ G PG+ G+ G GE G G GPTG PG G +G DG P G GA GP G PG A G G RG G GPPG +G G G+ Sbjct: 602 QGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTPVSKHEFIRYFAIIGEPGAQGPSGNPGTPGRQGMPGASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPGS 740 HSP 12 Score: 50.447 bits (119), Expect = 8.319e-6 Identity = 40/86 (46.51%), Postives = 48/86 (55.81%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAG 4087 GK G GEPG GP G QGP G G +G G+ G G GP+G +G G+ G+ G+ GP GE GP G GP G+ GD G G Sbjct: 584 AGKNGNAGEPGERGPVGPQGPQGAPGTQG---PPGLPGKTGESGPRGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNG 666
BLAST of Collagen F-8 vs. Ensembl Nematostella
Match: EDO49401 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGC7]) HSP 1 Score: 97.4413 bits (241), Expect = 1.842e-22 Identity = 64/222 (28.83%), Postives = 112/222 (50.45%), Query Frame = 2 Query: 4382 LEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 L + + P+G+ +PAR CRD+ L P+ SG +WIDPN G DSI V C F + +C+ T MK + + W ++ D +G++ P SQL+FL++L +A Q +T C + +YDS +++ D +I++++ N +L + S + +KDDC + + +++ + T LPIVDI + D G+ +++ Sbjct: 15 LSLRVGLFKNPLGTHRHPARTCRDLKLCRPEAESGQYWIDPNGGITEDSILVYCDFALNA--SCI--TPNQFMKWYSGRDGYK-----WFAQ--DLHGSQQFHYTSDP-SQLLFLRLLSDRASQKITYHCRNSVAWYDSRSRDFDKSIKLKSGN--------GIELYAASSNKYKPTIIKDDCGVKDGKWRKTVLEVNTESTHRLPIVDIAVFDIGDRDEEF 216
BLAST of Collagen F-8 vs. Ensembl Nematostella
Match: EDO44729 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV66]) HSP 1 Score: 100.908 bits (250), Expect = 2.935e-21 Identity = 64/232 (27.59%), Postives = 104/232 (44.83%), Query Frame = 2 Query: 4319 IPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMS-QLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDI 5011 + ++T+ I++ K LY L + + + P+GS++NPA C ++ N + G +WIDPN G +D+I+V CKF K ++CV + K + T W+ L++ KI Y QL FL++L TK Q + + C V++ +K++D + + FN + R S +L K D RT + K LPIVD Sbjct: 881 LKQNTHLIVNDKKSLY-----LSEMDDKSKTPLGSRANPALTCHELKHVN-GIKDGEYWIDPNQGCSSDAIKVYCKF-KTGGESCVRPALKMIPKETWNNATTAG---WYQFSKLERG----YKITYLTNKVQLNFLRLLTTKVTQKIIVKCKSVVVWFHRHSKSYDYSWKFHGFNGHQFTYNSSR-----SSLNVLRDACKYDDGRWRRT----ELLFETTKLRTLPIVDF 1089 HSP 2 Score: 56.225 bits (134), Expect = 1.336e-7 Identity = 66/216 (30.56%), Postives = 88/216 (40.74%), Query Frame = 2 Query: 3023 GPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFK------------GPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 3634 GPQG GPIG+ G+ G G+PG+PG +G GP G + G +G G G+ G+ G+PG G +GP G KG G G G G G G GP G +G G+PG PG QG+PG G+ G +G+QG+ G+ G IG PG+PG +G + Sbjct: 173 GPQGTMGPIGAKGILGDVGAPGMPGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKG------------------------ILGDVGAPGMPGSRGLNGTRGPEGDLGHSGLPGPPGFQGDPGKP---------------------------------------GIRGHEGLQGVSGKAGSIGDPGDPGDEGNE 325 HSP 3 Score: 55.8398 bits (133), Expect = 1.811e-7 Identity = 46/108 (42.59%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVG------PTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAK 2716 GP G GE G G PG G P G +GS G PG G PG G +G G +GP G PG G G+ G+ G+ G G +G G G G+RG G PG GP G++ Sbjct: 464 GPKGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGEVGKPGPIGYQGREGFKGPNGLPGLPGKRGLRGSEGSTGVYGMKGMKGPIGVPGFRGQHGTPGDIGPPGSE 571 HSP 4 Score: 54.6842 bits (130), Expect = 3.470e-7 Identity = 47/116 (40.52%), Postives = 65/116 (56.03%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDG------ERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPG---ARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G G+RG G+PG G G IG+ G G GD G G G +GS+GP GD G+ G+ G +G G++G G G PG +G G++G +G+PG PG G +G +G+ Sbjct: 422 GPQGLEGDRGPIGKPGVSGTKGNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGEVGKPGPIGYQGREGFKGPNGLPGLPGKRGLRGSEGS 537 HSP 5 Score: 54.6842 bits (130), Expect = 3.650e-7 Identity = 50/120 (41.67%), Postives = 62/120 (51.67%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGD------------PGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 ++GP G PGE+G +G G+VG GLIG G G G G GERGS G G GD G G+ G G+PG G+ GP G G G +G +G G G GP+G +G QG Sbjct: 27 DRGPRGPPGEQGFSGVKGAVGSHGLIGRKGEKGKEGRDGVKGERGSKGKSGLPGDKGPVGPPGHPGHKGAIGIIGKSGSPGKDGSEGPTGESGPTGALGAKGQKGGVGSIGPSGLQGFQG 146 HSP 6 Score: 53.9138 bits (128), Expect = 6.060e-7 Identity = 93/217 (42.86%), Postives = 112/217 (51.61%), Query Frame = 2 Query: 2135 EKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSG------------IDGNPGAKGAVGP------RGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 ++GP GP G +G G KG +G G IG G++G+ G G +G GS G SGL GD GP+GPPG PG G G G SG G G G G GP+G G +G+ G GS+GP+GL G G G GD G DG G G G TG PG G G G PG G++GP +G G +G+ GY G DG G G G G QGT Sbjct: 27 DRGPRGPPGEQGFSGVKGAVGSHGLIGRKGEKGKEGRDGVKGERGSKGKSGLPGDKGPVGPPGHPGHKGAIGIIGKSGSPGKDGSEGPTGESGPTGALGAKGQKGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGT 243 HSP 7 Score: 53.1434 bits (126), Expect = 1.152e-6 Identity = 44/109 (40.37%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 ++G G G +G GE GS GP G G +G G G+ GS+G G +G GP G G++G G +G PG G RG G+ G+ G G G+ GP G G +G+ GT Sbjct: 456 DRGEQGPFGPKGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGEVGKPGPIGYQGREGFKGPNGLPGLPGK---RGLRGSEGSTGVYGMKGMKGPIGVPGFRGQHGT 561 HSP 8 Score: 52.7582 bits (125), Expect = 1.684e-6 Identity = 49/123 (39.84%), Postives = 63/123 (51.22%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTG------------DPGKDGLSGIDGNPGAKGAVGPRGTP---GARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 + G G G +G G G GP G +G IGA G GD G+ G G +GS GP+G D G DG+ G G+ G G GP+GT GA+G +G G G+PG G NG +G +G Sbjct: 153 DAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPGSRGLNGTRGPEG 275 HSP 9 Score: 51.9878 bits (123), Expect = 2.657e-6 Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGI---KGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGE 4090 G +G LG PG G +G++GP G G+ KG +G +G G++G RG QGP G KG G G +GP G+ G G GP G+ G G+ GE Sbjct: 413 GPRGALGHPGPQGLEGDRGPIGKPGVSGTKGNIGAKGRIGLQGDRGEQGPFGPKGAGGEMGSKGPPGDFGEVGVRGPNGELGSEGVPGE 501 HSP 10 Score: 51.9878 bits (123), Expect = 2.680e-6 Identity = 47/103 (45.63%), Postives = 52/103 (50.49%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKG 2719 G G+ G G TG PG G G IG+ G G G PG G RG G+RGP GD G GL G G G G G RG G +G G G G PG PG G +G Sbjct: 224 GVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPGSRGLNGTRGPEGDLGHSGLPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGDPGDEGNEG 326 HSP 11 Score: 51.9878 bits (123), Expect = 2.941e-6 Identity = 52/120 (43.33%), Postives = 58/120 (48.33%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPG------SVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRG------FDGIPGPPGPNGAKGEQG 2728 GP G G G+ G PG S+GP+GL G G G GD G DG G G G TG PG G G G G G VG G PG+RG G RG G+PGPPG G G+ G Sbjct: 177 TMGPIGAKGILGDVGAPGMPGGVGSIGPSGLQGFQGRMGLKGDAGYDGVDGFKGHAGNTGIPGPQGTMGPIGAKGILGDVGAPGMPGSRGLNGTRGPEGDLGHSGLPGPPGFQGDPGKPG 296 HSP 12 Score: 51.2174 bits (121), Expect = 4.759e-6 Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 3839 QGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMK------GVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGE 4090 +GP G G+ G +G GP GD GIKGG G+ G + G+ G +G QG +G G +G GK+GP GE+G G G G G PG G+ Sbjct: 755 RGPQGPVGIKGIRGASGPIGDSGIKGGYGLMGPRGPDGNPGLLGRKGRQGEKGTAGRLGERGKKGPFGENGVLGKRGTLGPPGSPGSIGD 844
BLAST of Collagen F-8 vs. Ensembl Nematostella
Match: EDO48996 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHK9]) HSP 1 Score: 89.7373 bits (221), Expect = 4.836e-20 Identity = 62/210 (29.52%), Postives = 99/210 (47.14%), Query Frame = 2 Query: 4433 PARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMR-----KIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 PAR CRD+ + +PK+ SGN+WIDPN G +DSI+V C FE S TC+ Q+ F + + W + L G R K CP SQL FL++L +A Q VT C +A + S + +++I+++ N + K K + ++DDC + + + K LP++D+ + D G ++ Sbjct: 3 PARTCRDLHMCHPKLKSGNYWIDPNEGIPDDSIQVYCDFENNS--TCIFPNNQTRSHRRKWFSGPDGYK--WFGKELRGFGTVRRGRDGPKEGTCP-SQLAFLRLLSDRARQNVTYHCLNSAA-WSSGKGDLNHSIKIKGDNGVELHASSSNKFKPQI--------IRDDCHIKDGKWRQTIITVDTSKPHRLPVLDVAVFDIGGQGEEF 198
BLAST of Collagen F-8 vs. Ensembl Nematostella
Match: EDO49368 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG67]) HSP 1 Score: 93.9745 bits (232), Expect = 2.593e-19 Identity = 61/223 (27.35%), Postives = 99/223 (44.39%), Query Frame = 2 Query: 4361 LYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKY-CPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDF 5026 L + I+ L + + + G+K PAR CR++ + NP SG ++IDPN GS +D+ EV C F + TCV + S N W++E N KI Y + Q+ FL+++H A+Q +T C + + DS I++ N+ I + L E + KD+ + + IS K+ + LPI+D+ D Sbjct: 425 LIAVINLLINKIVTYKEQEGTKGKPARSCRNLKIDNPDKKSGYYYIDPNEGSPSDAEEVWCDFTTNA--TCVFPKNTEII--TRSLVVNSNGEDTWITE------NDDVKIDYKLDVVQMKFLRLMHKTAKQNMTYHCYNSRAWEDS------RTIKLLGDNEEEITAKL----------RLNECQNKDNQWHK------TVLDISTKQKDKLPIIDVAPYDL 615 HSP 2 Score: 63.5438 bits (153), Expect = 6.279e-10 Identity = 49/107 (45.79%), Postives = 57/107 (53.27%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QGP G G++G G G G G G G G+ G PG GERG++G GPTG PG G G+ G GA G G RG G+ G G G G PGP G G KG +G Sbjct: 137 QGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADGTPGERGQQGSSGASGLPGRPGSPGPAGAPGLKGPRG 243 HSP 3 Score: 62.003 bits (149), Expect = 1.905e-9 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGE 4090 G +G G PG +G +G QGP G +G KGG G +G+ GV G GPQG +G G+ G G+ G +GE GP G+ GP GQ PG++GE Sbjct: 120 GDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQ---PGVSGE 202 HSP 4 Score: 62.003 bits (149), Expect = 1.905e-9 Identity = 51/105 (48.57%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDG---ERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYR----GFDGIPGPPG 2701 +G G PGE+GE G G VGPTG G G PG +G+ G+DG ERG GS G +G PG+ G G G PG KG PRG GA+G+ G + G G PG PG Sbjct: 167 RGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADGTPGERGQQGSSGASGLPGRPGSPGPAGAPGLKG---PRGEKGAKGDRGSKGPKGGASGFPGKPG 268 HSP 5 Score: 58.151 bits (139), Expect = 3.077e-8 Identity = 50/119 (42.02%), Postives = 60/119 (50.42%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGL------IGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGT-----PGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 QG G PG +G+ GEPG+VGP G G G G G G DG G G++G G PGK G G+ G G +G GP G G +G G +G G+ GPPG NG KG G Sbjct: 9 QGSQGVPGTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERGAPGKQGKQGVSGEKGNQGKRGPAGAGIPGDDGRQGPPGPQGSRGVTGPPGFNGDKGANGA 127 HSP 6 Score: 56.225 bits (134), Expect = 9.647e-8 Identity = 51/135 (37.78%), Postives = 65/135 (48.15%), Query Frame = 2 Query: 3023 GPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 GPQG G G PG G +G+ G PG G+ G +GP+G +G G G +G+PGV G GPQGE+G+ +G G QG G +GE G G GP G+ GV G G G PG + Sbjct: 105 GPQGSRGVTGPPGFNGDKGANGAPGRAGDRG---AQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGN------------------------DGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADGTPGER 212 HSP 7 Score: 55.0694 bits (131), Expect = 2.485e-7 Identity = 45/107 (42.06%), Postives = 53/107 (49.53%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 GP G+ G++G G PG G G G G G G G+ G G G+ GP G+ G DG G G GA G VGP G+PG G G G G G PG G +G G Sbjct: 114 GPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGERGAVGEVGPTGSPGPAGQPGVSGEAGADGTPGERGQQGSSGA 220 HSP 8 Score: 52.373 bits (124), Expect = 1.579e-6 Identity = 45/97 (46.39%), Postives = 50/97 (51.55%), Query Frame = 2 Query: 3827 SMGKQGPLGE--PGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGV------RGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 + GK+GP G PG G QG GP G RG+ G G G KG G RG QGPQG KG+ G +G G G G G G RG G PG GER Sbjct: 83 NQGKRGPAGAGIPGDDGRQGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQGER 179 HSP 9 Score: 51.6026 bits (122), Expect = 3.043e-6 Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 2 Query: 3851 GEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G+ G GPQG QG G +G +G G G +G +G GP GP G KG+ G +G++G G DG KG G G++G G++GE+ Sbjct: 1 GKSGAPGPQGSQGVPGTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERGAPGKQGKQGVSGEK 81 HSP 10 Score: 51.2174 bits (121), Expect = 4.101e-6 Identity = 47/107 (43.93%), Postives = 56/107 (52.34%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGP---QGEQGPTGDRGIKGGVG---------IQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPM-----GEDGPKGAIGPRGQR---GDPGLAGER 4093 G +G GEPG GP QGE+GPTG G KG G G KG G G QG QG+ GE G+ GK GP G+DG +G GP+G R G PG G++ Sbjct: 16 GTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERGAPGKQGKQGVSGEKGNQGKRGPAGAGIPGDDGRQGPPGPQGSRGVTGPPGFNGDK 122 HSP 11 Score: 50.0618 bits (118), Expect = 7.636e-6 Identity = 79/204 (38.73%), Postives = 95/204 (46.57%), Query Frame = 2 Query: 3023 GPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 3634 G G GP GS G+PG +G G PG +G G G +GP G G G+ G G G PG G +GE+G G QG G+ GEKG G GP G G+PG G QG PG +G G G G G G G G GD G+ GP G G G GA+G+ G+ G GP G+ GN G+ G Q Sbjct: 1 GKSGAPGPQGSQGVPGTKGDRGEPGAVGPRGQQGEEGPTGPAGPKGDAGKNGQDGRPGYDGAKGERG---------------------------APGKQGKQGVSGEKGNQGKRGPAG-AGIPGDDGRQGPPGPQGSRGVTGPPGFNGDKGANGAPGRAGDRGAQGPQGQKGDKGGAGARGLPGVAGTPGPQGERGNDGKPGEQ 176
BLAST of Collagen F-8 vs. Ensembl Medaka
Match: ENSORLT00000034900.1 (collagen alpha-1(XI) chain [Source:NCBI gene;Acc:101162214]) HSP 1 Score: 143.665 bits (361), Expect = 1.004e-33 Identity = 70/239 (29.29%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLS-------EILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 ++++++ + ++ + ++RPIG+ +PAR C+++ + P G++WIDPN G DS+ V C F +TC+ K++ L S+ K E P W+ D++GN + + QL FL++L A+QT T C +A ++DS + ++ +A+R+RA ND + +++ S + + V D C R R+ + +I+A E LPI+D+ +DFG ++QK Sbjct: 1353 MEEVFATLSSMKNEVELMRRPIGTFESPARTCKELLMVQPNFKDGDYWIDPNQGCHKDSLRVFCNFTAGG-ETCLYPDKRTETVKLASWNK-EKPGSWYSQYRRGKQFSYSDRDGNPVHVV------QLTFLKLLSATAKQTFTYNCQNSAGWFDSTSSSYQHALRLRASNDEEL---------TQAKSPFITV-VHDGCQFR-RSQERTVLEIAAPSAELLPIIDVAPEDFGKNSQKF 1572 HSP 2 Score: 55.8398 bits (133), Expect = 5.385e-7 Identity = 45/105 (42.86%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLK---------------GEIGSSGKEGPMGEDGP---KGAIGPRGQRGDPGLAGER 4093 G+ GP G PG++GPQG G GD+G GG G +G KG +G GP GP G++ G G G GP G++GP KGA GP G +G PG GE+ Sbjct: 908 GEPGPAGLPGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAGPSGPAGIQGPVGPPGPSGADGEPGPRGQQGLNGPKGDEGPRGFKGASGPSGLQGMPGPPGEK 1012 HSP 3 Score: 55.4546 bits (132), Expect = 6.592e-7 Identity = 53/127 (41.73%), Postives = 61/127 (48.03%), Query Frame = 2 Query: 2411 GPSGYPGERGETG------EPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGI------------DGNPGAKGAVG---PRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 G G PGE+G TG EPG G G+ G G PG GD G G G GS+G G+ G G +GI DG PG +G G P+G G RG G G G+ G PGP G KGE G Sbjct: 890 GEKGEPGEKGTTGLAGRDGEPGPAGLPGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAGPSGPAGIQGPVGPPGPSGADGEPGPRGQQGLNGPKGDEGPRGFKGASGPSGLQGMPGPPGEKGESG 1016 HSP 4 Score: 54.6842 bits (130), Expect = 1.293e-6 Identity = 68/149 (45.64%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 3026 PQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGE---------------KGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 P GP G IG PG PG S G G MGE G PG KG G G G PG G+PG+ G GP GE KGD+G+ GP G G GP+GP G G +G G +G GL G KG+ GP G G G GL G+ G PG K Sbjct: 867 PAGPAGAIGQPGRPG---SVGPAGPMGEKGEPGEKGTTGLAGRDGEPGPAGLPGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAGPSGPAGIQGPVGPPGPSGADGEPGPRGQQGLNGPKGDEGPRGFKGASGPSGLQGMPGPPGEK 1012 HSP 5 Score: 53.9138 bits (128), Expect = 2.056e-6 Identity = 54/123 (43.90%), Postives = 64/123 (52.03%), Query Frame = 2 Query: 2414 PSGYPGERGETGEPGSVGPTGLIGSIGAP---GSTGDPGSDGERGSIGS---RGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYR---------GFDGIPGPPGP---NGAKGEQG 2728 P+G G G+ G PGSVGP G +G G P G+TG G DGE G G GP G PG+DG G G PG KG+ G +G G G G + G DG PGP G NG KG++G Sbjct: 867 PAGPAGAIGQPGRPGSVGPAGPMGEKGEPGEKGTTGLAGRDGEPGPAGLPGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAGPSGPAGIQGPVGPPGPSGADGEPGPRGQQGLNGPKGDEG 989 HSP 6 Score: 53.5286 bits (127), Expect = 2.715e-6 Identity = 51/127 (40.16%), Postives = 57/127 (44.88%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGSVGPTGL---------------------IGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GP G G RG G PG+VGP GL G GA G G PGS G G +G +G G+ G GL+G DG PG G G G G G G +G G PG G G KGE G Sbjct: 824 GPPGLKGFRGTRGTPGAVGPAGLKGGEGLPGVAGAAGATGERGPAGPAGAIGQPGRPGSVGPAGPMGEKGEPGEKGTTGLAGRDGEPGPAGLPGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAG 950
BLAST of Collagen F-8 vs. Ensembl Medaka
Match: col11a2 (collagen alpha-1(XI) chain [Source:NCBI gene;Acc:101154880]) HSP 1 Score: 139.428 bits (350), Expect = 1.195e-33 Identity = 74/257 (28.79%), Postives = 132/257 (51.36%), Query Frame = 2 Query: 4304 LENPEIPKDTNGIISI----LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKY----CPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYD-SINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 L +P+ + + +I +++++ ++D L + + SI+ P+G++ +PAR C+D+ LS P + G +WIDPN G DS +V C F K +TC+ +K ++S+ TE P W+ + G+K + + QL FL++L +A Q +T C+ + + D S NH A+ R ND + + +K+ +KD C R + + +I+ + E+LP++DIQ+ DFG NQ+ Sbjct: 323 LRSPKSKRSIDAKFTIGNEGMEEIFGSLDSLRQELESIRFPLGTQDSPARTCQDLHLSQPDLKDGEYWIDPNQGCSRDSFKVFCNFTKG--ETCLHPSKGIDSVKMSSW-DTETPGSWYSQFV---TGSKFSYVDASGEPVGVVQLGFLRLLSVQARQNLTYHCHRSVAWADRSAKNNHKRALHFRGANDEELSYETNPYIKA----------LKDGCSYR-KGFDRTILEINTPQVEHLPLLDIQVSDFGESNQQF 562 HSP 2 Score: 56.9954 bits (136), Expect = 1.630e-7 Identity = 44/94 (46.81%), Postives = 55/94 (58.51%), Query Frame = 2 Query: 2447 GEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 G+PG+VGP G G +G G G PG++G RG GS G G PG G G G G G G RG PGA+G G++G G+ G PG G KG++G Sbjct: 157 GDPGAVGPPGKTGPVGPQGQPGKPGTEGLRGLPGSVGEQGSPGAAGQKGPPGPVGPAGLPGLRGDPGAKGEKGHQGLIGLVGAPGEQGEKGDRG 250
BLAST of Collagen F-8 vs. Ensembl Medaka
Match: ENSORLT00000007336.2 (collagen alpha-1(XI) chain [Source:NCBI gene;Acc:101162214]) HSP 1 Score: 142.51 bits (358), Expect = 1.821e-33 Identity = 68/239 (28.45%), Postives = 126/239 (52.72%), Query Frame = 2 Query: 4352 LKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLS-------EILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 ++++++ + ++ + ++RPIG+ +PAR C+++ + P ++WIDPN G DS+ V C F +TC+ K++ L S+ K E P W+ D++GN + + QL FL++L A+QT T C +A ++DS + ++ +A+R+RA ND + +++ S + + V D C +R + +I+A E LPI+D+ +DFG ++QK Sbjct: 1347 MEEVFATLSSMKNEVELMRRPIGTFESPARTCKELLMVQPNFKD-DYWIDPNQGCHKDSLRVFCNFTAGG-ETCLYPDKRTETVKLASWNK-EKPGSWYSQYRRGKQFSYSDRDGNPVHVV------QLTFLKLLSATAKQTFTYNCQNSAGWFDSTSSSYQHALRLRASNDEEL---------TQAKSPFITV-VHDGCQER------TVLEIAAPSAELLPIIDVAPEDFGKNSQKF 1560 HSP 2 Score: 61.6178 bits (148), Expect = 9.909e-9 Identity = 54/118 (45.76%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSI-GAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGT---PGARGNIGY---RGFDGIPGP---PGPNGAKGEQGT 2731 QGP G PGE+G G+PG +G G+ G G PG G PG G +G GS+GP G PG G+ G DG G KG+ G +G PG +G++G RG +G PGP GP G KG+ G+ Sbjct: 503 QGPIGLPGEKGPQGKPGILGLPGIDGPPQGHPGREGPPGEKGLQGLPGSQGPIGYPGTRGVKGADGVRGMKGSKGEKGEDGFPGIKGDMGIKGDRGDNGAPGPRGEDGPEGPKGQTGS 620 HSP 3 Score: 60.077 bits (144), Expect = 2.817e-8 Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTG---DRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEI------GSSGKEGPMGEDGPKGAIGPRGQRGD---PGLAGER 4093 G++GP GE GL G G QGP G RG+KG G++GMKG +G +G G G+KG++ G +G GP GEDGP+G G G GD PG+AGE+ Sbjct: 535 GREGPPGEKGLQGLPGSQGPIGYPGTRGVKGADGVRGMKGSKGEKGEDGFPGIKGDMGIKGDRGDNGAPGPRGEDGPEGPKGQTGSLGDPGAPGIAGEK 633 HSP 4 Score: 56.6102 bits (135), Expect = 3.058e-7 Identity = 51/109 (46.79%), Postives = 58/109 (53.21%), Query Frame = 2 Query: 2414 PSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGD---PGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 P G+PG G GE G G G G IG PG+ G G+DG RG GS+G G+ PG G GI G+ G GA GPRG G G G G G PG PG G KG+ G Sbjct: 530 PQGHPGREGPPGEKGLQGLPGSQGPIGYPGTRGVKGADGVRGMKGSKGEKGEDGFPGIKGDMGIKGDRGDNGAPGPRGEDGPEGPKGQTGSLGDPGAPGIAGEKGKLGV 638 HSP 5 Score: 56.225 bits (134), Expect = 3.681e-7 Identity = 49/108 (45.37%), Postives = 57/108 (52.78%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +QGP GYPG RG G + G G+ GS G G G PG G+ G G RG G PG G G +G G G++G G PG G G G G+PG PG GAKG G Sbjct: 551 SQGPIGYPGTRGVKG---ADGVRGMKGSKGEKGEDGFPGIKGDMGIKGDRGDNGAPGPRGEDGPEGPKGQTGSLGDPGAPGIAGEKGKLGVPGLPGYPGRQGAKGSLG 655 HSP 6 Score: 53.5286 bits (127), Expect = 2.430e-6 Identity = 45/105 (42.86%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLK---------------GEIGSSGKEGPMGEDGP---KGAIGPRGQRGDPGLAGER 4093 G+ GP G PG++GPQG G GD+G GG G +G KG +G GP GP G++ G G G GP G++GP KGA GP G +G PG GE+ Sbjct: 905 GEPGPAGLPGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAGPSGPAGIQGPVGPPGPSGADGEPGPRGQQGLNGPKGDEGPRGFKGASGPSGLQGMPGPPGEK 1009 HSP 7 Score: 53.1434 bits (126), Expect = 3.863e-6 Identity = 53/127 (41.73%), Postives = 61/127 (48.03%), Query Frame = 2 Query: 2411 GPSGYPGERGETG------EPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGI------------DGNPGAKGAVG---PRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 G G PGE+G TG EPG G G+ G G PG GD G G G GS+G G+ G G +GI DG PG +G G P+G G RG G G G+ G PGP G KGE G Sbjct: 887 GEKGEPGEKGTTGLAGRDGEPGPAGLPGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAGPSGPAGIQGPVGPPGPSGADGEPGPRGQQGLNGPKGDEGPRGFKGASGPSGLQGMPGPPGEKGESG 1013 HSP 8 Score: 51.9878 bits (123), Expect = 8.315e-6 Identity = 68/149 (45.64%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 3026 PQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGE---------------KGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTK 3427 P GP G IG PG PG S G G MGE G PG KG G G G PG G+PG+ G GP GE KGD+G+ GP G G GP+GP G G +G G +G GL G KG+ GP G G G GL G+ G PG K Sbjct: 864 PAGPAGAIGQPGRPG---SVGPAGPMGEKGEPGEKGTTGLAGRDGEPGPAGLPGIAGPQGPPGEDGDKGETGGPGQKGSKGDKGEAGPSGPAGIQGPVGPPGPSGADGEPGPRGQQGLNGPKGDEGPRGFKGASGPSGLQGMPGPPGEK 1009
BLAST of Collagen F-8 vs. Ensembl Medaka
Match: col2a1a (collagen alpha-1(II) chain [Source:NCBI gene;Acc:100529192]) HSP 1 Score: 140.969 bits (354), Expect = 5.033e-33 Identity = 78/271 (28.78%), Postives = 125/271 (46.13%), Query Frame = 2 Query: 4259 TRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILD--------QNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 + F +TE+ D L + +N + ++ S + L + +++ P G++ NPAR CRD+ L +P+ SG+FWIDPNLG D+I+V C E+ +TCV K K++N + W E + Q+G I QL FL++L T+A Q +T C + Y D N A+ ++ N D ++++E S ++D C +N+ F+ KT LPIVDI D G +Q+ Sbjct: 1154 SAFAGLGQTEKSPDPLRYMRADEASNSLRQHDVEVDSTLKSLNSQIENMRSPDGTQKNPARTCRDLKLCHPEWKSGDFWIDPNLGCTADAIKVFCNM--ETGETCVYPRISKVPKKNWWSSKSKNLKHIWFGETISGGFHFSYGQDG----PIPNSANIQLNFLRLLSTEASQNLTYHCKNSIAYMDQATGNLKKALVLQGSN--------DVEIRAEGNSRFTYSVMEDGCKRHSGRWSNTVFEYKTMKTSRLPIVDIAPMDIGGADQEF 1410 HSP 2 Score: 61.2326 bits (147), Expect = 1.159e-8 Identity = 45/96 (46.88%), Postives = 53/96 (55.21%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPG 2692 + GP G PG RG G+ G VGP G G G PG+ G PG+ GE G G +G +G PG G SG G G G GP+G GA+G G GF G G Sbjct: 741 STGPIGAPGVRGAPGDRGEVGPPGPAGFAGPPGADGQPGAKGELGESGQKGESGAPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGATGFPGAAG 836 HSP 3 Score: 55.4546 bits (132), Expect = 6.524e-7 Identity = 57/156 (36.54%), Postives = 69/156 (44.23%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLI------GSIGAPGSTGDPGS------------------------DGERGSIGSRGPTGDPGKDGLSG------------------IDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G SG PG +G +G PG VGPTG+ G+ GAPG+TG PG+ DG +G+ G GP G PG GL G DG PG +G G RG G G G RGF G+PGP G G +G G Sbjct: 789 QKGESGAPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGATGFPGAAGRVGPPGPNGNPGPAGPAGAAGKDGPKGTRGDAGPPGRPGDAGLRGPAGPPGEKGEPGEEGKPGTDGPPGPQGLAGSRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 944 HSP 4 Score: 53.5286 bits (127), Expect = 2.758e-6 Identity = 54/139 (38.85%), Postives = 63/139 (45.32%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGS---------------VGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGID------------------GNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GP G G RG G PGS GP GL G G G+ G PG+ G+RG G +GP G PGKDG G+ G+ G GA G RG PG RG +G G G GPPG +G G +G Sbjct: 644 GPQGLQGPRGLPGTPGSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGDRGDNGQKGPEGAPGKDGARGLTGPIGPPGPAGPNGAKGETGSTGPIGAPGVRGAPGDRGEVGPPGPAGFAGPPGADGQPGAKG 782
BLAST of Collagen F-8 vs. Ensembl Medaka
Match: col2a1a (collagen alpha-1(II) chain [Source:NCBI gene;Acc:100529192]) HSP 1 Score: 139.813 bits (351), Expect = 1.091e-32 Identity = 78/271 (28.78%), Postives = 125/271 (46.13%), Query Frame = 2 Query: 4259 TRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILD--------QNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 + F +TE+ D L + +N + ++ S + L + +++ P G++ NPAR CRD+ L +P+ SG+FWIDPNLG D+I+V C E+ +TCV K K++N + W E + Q+G I QL FL++L T+A Q +T C + Y D N A+ ++ N D ++++E S ++D C +N+ F+ KT LPIVDI D G +Q+ Sbjct: 1101 SAFAGLGQTEKSPDPLRYMRADEASNSLRQHDVEVDSTLKSLNSQIENMRSPDGTQKNPARTCRDLKLCHPEWKSGDFWIDPNLGCTADAIKVFCNM--ETGETCVYPRISKVPKKNWWSSKSKNLKHIWFGETISGGFHFSYGQDG----PIPNSANIQLNFLRLLSTEASQNLTYHCKNSIAYMDQATGNLKKALVLQGSN--------DVEIRAEGNSRFTYSVMEDGCKRHSGRWSNTVFEYKTMKTSRLPIVDIAPMDIGGADQEF 1357 HSP 2 Score: 61.6178 bits (148), Expect = 8.629e-9 Identity = 45/96 (46.88%), Postives = 53/96 (55.21%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPG 2692 + GP G PG RG G+ G VGP G G G PG+ G PG+ GE G G +G +G PG G SG G G G GP+G GA+G G GF G G Sbjct: 688 STGPIGAPGVRGAPGDRGEVGPPGPAGFAGPPGADGQPGAKGELGESGQKGESGAPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGATGFPGAAG 783 HSP 3 Score: 55.8398 bits (133), Expect = 4.395e-7 Identity = 57/156 (36.54%), Postives = 69/156 (44.23%), Query Frame = 2 Query: 2405 NQGPSGYPGERGETGEPGSVGPTGLI------GSIGAPGSTGDPGS------------------------DGERGSIGSRGPTGDPGKDGLSG------------------IDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 +G SG PG +G +G PG VGPTG+ G+ GAPG+TG PG+ DG +G+ G GP G PG GL G DG PG +G G RG G G G RGF G+PGP G G +G G Sbjct: 736 QKGESGAPGPQGPSGAPGPVGPTGVSGPKGARGAQGAPGATGFPGAAGRVGPPGPNGNPGPAGPAGAAGKDGPKGTRGDAGPPGRPGDAGLRGPAGPPGEKGEPGEEGKPGTDGPPGPQGLAGSRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPG 891 HSP 4 Score: 53.9138 bits (128), Expect = 1.955e-6 Identity = 54/139 (38.85%), Postives = 63/139 (45.32%), Query Frame = 2 Query: 2411 GPSGYPGERGETGEPGS---------------VGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGID------------------GNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 GP G G RG G PGS GP GL G G G+ G PG+ G+RG G +GP G PGKDG G+ G+ G GA G RG PG RG +G G G GPPG +G G +G Sbjct: 591 GPQGLQGPRGLPGTPGSDGPKGAIGPAGAAGPQGPPGLQGMPGERGAGGIPGAKGDRGDNGQKGPEGAPGKDGARGLTGPIGPPGPAGPNGAKGETGSTGPIGAPGVRGAPGDRGEVGPPGPAGFAGPPGADGQPGAKG 729
BLAST of Collagen F-8 vs. Planmine SMEST
Match: SMESG000016282.1 (SMESG000016282.1) HSP 1 Score: 1355.89 bits (3508), Expect = 0.000e+0 Identity = 1141/1141 (100.00%), Postives = 1141/1141 (100.00%), Query Frame = 2 Query: 212 MGGIIKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 3634 MGGIIKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFQGPRGLSGPQGRRGGSGRSGNDGERGDSGLPGIKGKDGKPGDSGPRGLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVGLLGFQGGRGAGGPPGPSGPAGNQGPSGSKGEVGPTGSMGLPGPSGPRGPPGPEGISGPRGSTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLGIPGDPGPKGVKGDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVGPSGLKGDMGPLGPPGPPGPLGLQGSSGPSGPIGTTGPSGSIGNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTDGEIGPIGDKGGRGDTGMIGGPGPSGPTGSRGPPGSVGTKGNIGLDGDFGPIGDTGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRGKTGPPGSPGSTGPLGPNGLPGKEGPAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKGDDGSPGEQGPPGGSGPQGPQGPKGDFGSIGPPGPPGPIGVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ Sbjct: 1 MGGIIKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFQGPRGLSGPQGRRGGSGRSGNDGERGDSGLPGIKGKDGKPGDSGPRGLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVGLLGFQGGRGAGGPPGPSGPAGNQGPSGSKGEVGPTGSMGLPGPSGPRGPPGPEGISGPRGSTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLGIPGDPGPKGVKGDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVGPSGLKGDMGPLGPPGPPGPLGLQGSSGPSGPIGTTGPSGSIGNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTDGEIGPIGDKGGRGDTGMIGGPGPSGPTGSRGPPGSVGTKGNIGLDGDFGPIGDTGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRGKTGPPGSPGSTGPLGPNGLPGKEGPAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKGDDGSPGEQGPPGGSGPQGPQGPKGDFGSIGPPGPPGPIGVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 1141 HSP 2 Score: 729.169 bits (1881), Expect = 0.000e+0 Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 2 Query: 3827 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERGPNGPPGPPGPVGPLGPGGPKGEKGVKGPIGGPGLPGPVKIVDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL Sbjct: 1206 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERGPNGPPGPPGPVGPLGPGGPKGEKGVKGPIGGPGLPGPVKIVDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 1612 HSP 3 Score: 53.9138 bits (128), Expect = 1.310e-6 Identity = 44/93 (47.31%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQG------LKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G +G G PG +GP G G G +G KGG+GI G G +G GPQGP G L G GS G G MGE GP G GP G RG G G++ Sbjct: 896 GARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQ 988 HSP 4 Score: 53.9138 bits (128), Expect = 1.525e-6 Identity = 48/107 (44.86%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QGPSG G G+ G G +G G+ GS+G G G+PG G +G +GPTGD G G GI G G +G GP+G G +G IG G +G G GP GA G +G Sbjct: 1180 QGPSGPLGPMGQMGPQGPIGKPGIQGSMGKQGPLGEPGLSGPQGE---QGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRG 1283 HSP 5 Score: 53.1434 bits (126), Expect = 2.549e-6 Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G GP G PG+ GP G +G G +G GG GI G+KG G+ GP G G GE G +G G G DG KG +G RG GD G G+R Sbjct: 590 GDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQR 676 HSP 6 Score: 53.1434 bits (126), Expect = 2.592e-6 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVE------------GVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 +G+ GP+G+PG G QG QGP G G+ G G G +G + G GPQGP G G +G G +GP+G+ G +G++G +G G+PGL+G + Sbjct: 1123 VGEDGPIGQPGNPGRQGAQGPPGKSGVVGKPGKTGAQGEQGSSGVKGGKGERGQPGPQGPSGPLGPMGQMGPQGPIGKPGIQGSMGKQGPLGEPGLSGPQ 1222 HSP 7 Score: 52.373 bits (124), Expect = 4.189e-6 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGP---QGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAG 4087 G GP GEPG+ GP G +G G +G G +G G+ G +G +GP GP +G+ GE G+ G GP+G+ G +G GP G RG PG G Sbjct: 602 GPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVG 689 HSP 8 Score: 52.373 bits (124), Expect = 4.714e-6 Identity = 56/132 (42.42%), Postives = 65/132 (49.24%), Query Frame = 2 Query: 3020 MGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGE 3415 MG GP GPIG PG+ G G G G+ G GP G +GP G RG G G QGM GV G GPQG +G + G+ G +G +GPM GE+GP G IG G G PGL GE Sbjct: 1189 MGQMGPQGPIGKPGIQGSMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLK---------------------GEIGSSGKEGPM------GEDGPKGAIGPRGQRGDPGLAGE 1293 HSP 9 Score: 51.6026 bits (122), Expect = 6.492e-6 Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 2 Query: 2441 ETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 E G+PG GP+G +G +G G G G G +GS+G +GP G+P G+ G G +G G RG G G G +G +G+ GP GP G KGE G+ Sbjct: 1173 ERGQPGPQGPSGPLGPMGQMGPQGPIGKPGIQGSMGKQGPLGEP------GLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGS 1263
BLAST of Collagen F-8 vs. Planmine SMEST
Match: SMESG000016282.1 (SMESG000016282.1) HSP 1 Score: 1348.95 bits (3490), Expect = 0.000e+0 Identity = 1141/1141 (100.00%), Postives = 1141/1141 (100.00%), Query Frame = 2 Query: 212 MGGIIKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 3634 MGGIIKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFQGPRGLSGPQGRRGGSGRSGNDGERGDSGLPGIKGKDGKPGDSGPRGLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVGLLGFQGGRGAGGPPGPSGPAGNQGPSGSKGEVGPTGSMGLPGPSGPRGPPGPEGISGPRGSTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLGIPGDPGPKGVKGDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVGPSGLKGDMGPLGPPGPPGPLGLQGSSGPSGPIGTTGPSGSIGNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTDGEIGPIGDKGGRGDTGMIGGPGPSGPTGSRGPPGSVGTKGNIGLDGDFGPIGDTGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRGKTGPPGSPGSTGPLGPNGLPGKEGPAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKGDDGSPGEQGPPGGSGPQGPQGPKGDFGSIGPPGPPGPIGVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ Sbjct: 1 MGGIIKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFQGPRGLSGPQGRRGGSGRSGNDGERGDSGLPGIKGKDGKPGDSGPRGLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVGLLGFQGGRGAGGPPGPSGPAGNQGPSGSKGEVGPTGSMGLPGPSGPRGPPGPEGISGPRGSTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLGIPGDPGPKGVKGDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVGPSGLKGDMGPLGPPGPPGPLGLQGSSGPSGPIGTTGPSGSIGNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTDGEIGPIGDKGGRGDTGMIGGPGPSGPTGSRGPPGSVGTKGNIGLDGDFGPIGDTGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRGKTGPPGSPGSTGPLGPNGLPGKEGPAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKGDDGSPGEQGPPGGSGPQGPQGPKGDFGSIGPPGPPGPIGVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 1141 HSP 2 Score: 51.6026 bits (122), Expect = 6.353e-6 Identity = 44/94 (46.81%), Postives = 51/94 (54.26%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQG------LKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G +G G PG +GP G G G +G KGG+GI G G +G GPQGP G L G GS G G MGE GP G GP G RG G G++ Sbjct: 895 TGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQ 988
BLAST of Collagen F-8 vs. Planmine SMEST
Match: SMESG000016282.1 (SMESG000016282.1) HSP 1 Score: 1331.62 bits (3445), Expect = 0.000e+0 Identity = 1129/1129 (100.00%), Postives = 1129/1129 (100.00%), Query Frame = 2 Query: 248 MYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 3634 MYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFQGPRGLSGPQGRRGGSGRSGNDGERGDSGLPGIKGKDGKPGDSGPRGLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVGLLGFQGGRGAGGPPGPSGPAGNQGPSGSKGEVGPTGSMGLPGPSGPRGPPGPEGISGPRGSTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLGIPGDPGPKGVKGDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVGPSGLKGDMGPLGPPGPPGPLGLQGSSGPSGPIGTTGPSGSIGNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTDGEIGPIGDKGGRGDTGMIGGPGPSGPTGSRGPPGSVGTKGNIGLDGDFGPIGDTGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRGKTGPPGSPGSTGPLGPNGLPGKEGPAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKGDDGSPGEQGPPGGSGPQGPQGPKGDFGSIGPPGPPGPIGVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ Sbjct: 1 MYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFQGPRGLSGPQGRRGGSGRSGNDGERGDSGLPGIKGKDGKPGDSGPRGLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVGLLGFQGGRGAGGPPGPSGPAGNQGPSGSKGEVGPTGSMGLPGPSGPRGPPGPEGISGPRGSTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLGIPGDPGPKGVKGDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVGPSGLKGDMGPLGPPGPPGPLGLQGSSGPSGPIGTTGPSGSIGNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTDGEIGPIGDKGGRGDTGMIGGPGPSGPTGSRGPPGSVGTKGNIGLDGDFGPIGDTGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRGKTGPPGSPGSTGPLGPNGLPGKEGPAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKGDDGSPGEQGPPGGSGPQGPQGPKGDFGSIGPPGPPGPIGVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 1129 HSP 2 Score: 728.398 bits (1879), Expect = 0.000e+0 Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 2 Query: 3827 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERGPNGPPGPPGPVGPLGPGGPKGEKGVKGPIGGPGLPGPVKIVDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL Sbjct: 1194 SMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERGPNGPPGPPGPVGPLGPGGPKGEKGVKGPIGGPGLPGPVKIVDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 1600 HSP 3 Score: 53.9138 bits (128), Expect = 1.388e-6 Identity = 44/93 (47.31%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQG------LKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G +G G PG +GP G G G +G KGG+GI G G +G GPQGP G L G GS G G MGE GP G GP G RG G G++ Sbjct: 884 GARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQ 976 HSP 4 Score: 53.9138 bits (128), Expect = 1.657e-6 Identity = 48/107 (44.86%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 2408 QGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQG 2728 QGPSG G G+ G G +G G+ GS+G G G+PG G +G +GPTGD G G GI G G +G GP+G G +G IG G +G G GP GA G +G Sbjct: 1168 QGPSGPLGPMGQMGPQGPIGKPGIQGSMGKQGPLGEPGLSGPQGE---QGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRG 1271 HSP 5 Score: 53.1434 bits (126), Expect = 2.746e-6 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVE------------GVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 +G+ GP+G+PG G QG QGP G G+ G G G +G + G GPQGP G G +G G +GP+G+ G +G++G +G G+PGL+G + Sbjct: 1111 VGEDGPIGQPGNPGRQGAQGPPGKSGVVGKPGKTGAQGEQGSSGVKGGKGERGQPGPQGPSGPLGPMGQMGPQGPIGKPGIQGSMGKQGPLGEPGLSGPQ 1210 HSP 6 Score: 53.1434 bits (126), Expect = 2.770e-6 Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G GP G PG+ GP G +G G +G GG GI G+KG G+ GP G G GE G +G G G DG KG +G RG GD G G+R Sbjct: 578 GDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQR 664 HSP 7 Score: 52.373 bits (124), Expect = 4.591e-6 Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 2 Query: 3833 GKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGP---QGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAG 4087 G GP GEPG+ GP G +G G +G G +G G+ G +G +GP GP +G+ GE G+ G GP+G+ G +G GP G RG PG G Sbjct: 590 GPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVG 677 HSP 8 Score: 52.373 bits (124), Expect = 4.911e-6 Identity = 56/132 (42.42%), Postives = 65/132 (49.24%), Query Frame = 2 Query: 3020 MGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGE 3415 MG GP GPIG PG+ G G G G+ G GP G +GP G RG G G QGM GV G GPQG +G + G+ G +G +GPM GE+GP G IG G G PGL GE Sbjct: 1177 MGQMGPQGPIGKPGIQGSMGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLK---------------------GEIGSSGKEGPM------GEDGPKGAIGPRGQRGDPGLAGE 1281 HSP 9 Score: 51.6026 bits (122), Expect = 6.595e-6 Identity = 41/97 (42.27%), Postives = 55/97 (56.70%), Query Frame = 2 Query: 2441 ETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGT 2731 E G+PG GP+G +G +G G G G G +GS+G +GP G+P G+ G G +G G RG G G G +G +G+ GP GP G KGE G+ Sbjct: 1161 ERGQPGPQGPSGPLGPMGQMGPQGPIGKPGIQGSMGKQGPLGEP------GLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGS 1251
BLAST of Collagen F-8 vs. Planmine SMEST
Match: SMESG000016282.1 (SMESG000016282.1) HSP 1 Score: 1327 bits (3433), Expect = 0.000e+0 Identity = 1129/1129 (100.00%), Postives = 1129/1129 (100.00%), Query Frame = 2 Query: 248 MYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGRGIAGLKXXXXXXXXXXXXXXXXEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDXXXXXXXXXXXXXXXXXXXXLKGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGNIGLDGDFGPIGDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRXXXXXXXXXXXXXXXXXXXXXXXXXXAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 3634 MYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFQGPRGLSGPQGRRGGSGRSGNDGERGDSGLPGIKGKDGKPGDSGPRGLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVGLLGFQGGRGAGGPPGPSGPAGNQGPSGSKGEVGPTGSMGLPGPSGPRGPPGPEGISGPRGSTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLGIPGDPGPKGVKGDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVGPSGLKGDMGPLGPPGPPGPLGLQGSSGPSGPIGTTGPSGSIGNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTDGEIGPIGDKGGRGDTGMIGGPGPSGPTGSRGPPGSVGTKGNIGLDGDFGPIGDTGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRGKTGPPGSPGSTGPLGPNGLPGKEGPAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKGDDGSPGEQGPPGGSGPQGPQGPKGDFGSIGPPGPPGPIGVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ Sbjct: 1 MYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIAQRPFIQTQTGMCSMPGSKLGYIVGPEANLHLKSSFIFKAEKLLGSFSILLTAKVDRLSSDTIFSVNDINGHLNLAFKIGRKTVLHFREPGGITQTIEFKTQLDDLSWHRVALSVTVNAIKLFVDCQMAEVIPLTREIDEILVSGEMELLGQGYTGVIQDLFIVPGQEAAYRQCEIYTQDCPGLHDIMMNQQPDDSNTGNKGRIGDMGEPGEKGNAGKNGGIGLSGGRGAPGPQGQVFIIPLNLGTGGNDVARQANFRNSLINHMMVMKGVRGKRGPTGSPGPDGSLGGFGFKGENGPPGDTGFQGPRGLSGPQGRRGGSGRSGNDGERGDSGLPGIKGKDGKPGDSGPRGLRGSKGDFGQIGVKGDNGIIGEDGPRGPFGDSGDQGEVGLLGFQGGRGAGGPPGPSGPAGNQGPSGSKGEVGPTGSMGLPGPSGPRGPPGPEGISGPRGSTGPVGGRGRQGSPGVPGSDGTPGYAGIKGDQGVKGDSGHVGQRGDDGGFGTRGYKGERGKPGGFGPKGDIGKAGGLGIPGDPGPKGVKGDIGPAGIPGIEGPVGPKGEPGVQGPLGGRGIAGLKGTSGIMGPPGISGPDGEKGPNGPTGNRGVDGEKGNLGVRGPIGDIGDQGQRGPPGSRGSPGSVGPSGLKGDMGPLGPPGPPGPLGLQGSSGPSGPIGTTGPSGSIGNQGPSGYPGERGETGEPGSVGPTGLIGSIGAPGSTGDPGSDGERGSIGSRGPTGDPGKDGLSGIDGNPGAKGAVGPRGTPGARGNIGYRGFDGIPGPPGPNGAKGEQGTDGEIGPIGDKGGRGDTGMIGGPGPSGPTGSRGPPGSVGTKGNIGLDGDFGPIGDTGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQGMPGVPGELGPQGEKGDRGKTGPPGSPGSTGPLGPNGLPGKEGPAGVQGPMGLMGEKGENGPMGPIGEVGVPGLPGLQGEPGTKGDDGSPGEQGPPGGSGPQGPQGPKGDFGSIGPPGPPGPIGVNGAKGVQGIVGEDGPIGQPGNPGRQGAQ 1129 HSP 2 Score: 51.6026 bits (122), Expect = 6.727e-6 Identity = 44/94 (46.81%), Postives = 51/94 (54.26%), Query Frame = 2 Query: 3830 MGKQGPLGEPGLSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQG------LKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGER 4093 G +G G PG +GP G G G +G KGG+GI G G +G GPQGP G L G GS G G MGE GP G GP G RG G G++ Sbjct: 883 TGARGRNGRPGPTGPVGLAGAAGQKGDKGGIGINGKPGDKGFMGPQGPNGPIGSPGLPGIQGSPGVPGDMGEHGPPGFKGPEGTRGSTGNPGDQ 976
BLAST of Collagen F-8 vs. Planmine SMEST
Match: SMESG000016282.1 (SMESG000016282.1) HSP 1 Score: 637.491 bits (1643), Expect = 0.000e+0 Identity = 361/395 (91.39%), Postives = 366/395 (92.66%), Query Frame = 2 Query: 3863 LSGPQGEQGPTGDRGIKGGVGIQGMKGVEGVRGPQGPQGLKGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 5047 + G +G +GP G +G+ KGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERGPNGPPGPPGPVGPLGPGGPKGEKGVKGPIGGPGLPGPVKIVDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL Sbjct: 1 MKGVEGVRGPQGPQGL------------------------KGEIGSSGKEGPMGEDGPKGAIGPRGQRGDPGLAGERGPNGPPGPPGPVGPLGPGGPKGEKGVKGPIGGPGLPGPVKIVDMQEGSSKYVNTGTRFKREAKTEEGKDKLENPEIPKDTNGIISILKKLYSNIDKLEKNMNSIQRPIGSKSNPARHCRDIFLSNPKVTSGNFWIDPNLGSINDSIEVECKFEKESIKTCVSATKQSHMKSLTSFKKTENPRQWWLSEILDQNGNKMRKIKYCPMSQLVFLQMLHTKAEQTVTMMCNEAAVYYDSINKNHDNAIRMRAFNDRIIDTHVDRKLKSESGSTLLEIKVKDDCMDRLRTPTNSQFQISAKKTEYLPIVDIQLKDFGNDNQKL 371 The following BLAST results are available for this feature:
BLAST of Collagen F-8 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Collagen F-8 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Collagen F-8 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Collagen F-8 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Collagen F-8 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Collagen F-8 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Collagen F-8 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Collagen F-8 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Collagen F-8 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Collagen F-8 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Collagen F-8 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Collagen F-8 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Collagen F-8 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Collagen F-8 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30031625 ID=SMED30031625|Name=Collagen F-8|organism=Schmidtea mediterranea sexual|type=transcript|length=5275bpback to top protein sequence of SMED30031625-orf-1 >SMED30031625-orf-1 ID=SMED30031625-orf-1|Name=SMED30031625-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1623bp MGGIIKPNNVFGMYILFVLFSLAVQSVTSRIHLSHNRTSSHGDILQFIKIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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