RBR-type E3 ubiquitin transferase
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30031537 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Human
Match: RNF14 (ring finger protein 14 [Source:HGNC Symbol;Acc:HGNC:10058]) HSP 1 Score: 149.828 bits (377), Expect = 1.258e-39 Identity = 122/439 (27.79%), Postives = 191/439 (43.51%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQ-------IQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------------------------FGTHSN-----EFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKE--EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + D+ N FK +QN+ + I F PP+ +N +L WLS L + + +L +E G VL+ QFL+ ETL +L FG + E ++D + D + L + + D++ FN+ +F CS+C K G C+ F +C+HV+C AC DY++IQI++G + +C+ C + ++++++ E F R+D+L+L L CPR C++ V+ E G GIC C F FC C++ Y G C + K++ + + K +K E+E N KSCP C EK+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 11 DELLALASIYDGDEFRKAESVQGGETRIYLDLPQN-FKIFVSGNSNECLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQV--QCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHF 446
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Human
Match: RNF14 (ring finger protein 14 [Source:HGNC Symbol;Acc:HGNC:10058]) HSP 1 Score: 149.828 bits (377), Expect = 1.258e-39 Identity = 122/439 (27.79%), Postives = 191/439 (43.51%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQ-------IQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------------------------FGTHSN-----EFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKE--EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + D+ N FK +QN+ + I F PP+ +N +L WLS L + + +L +E G VL+ QFL+ ETL +L FG + E ++D + D + L + + D++ FN+ +F CS+C K G C+ F +C+HV+C AC DY++IQI++G + +C+ C + ++++++ E F R+D+L+L L CPR C++ V+ E G GIC C F FC C++ Y G C + K++ + + K +K E+E N KSCP C EK+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 11 DELLALASIYDGDEFRKAESVQGGETRIYLDLPQN-FKIFVSGNSNECLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQV--QCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHF 446
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Human
Match: RNF14 (ring finger protein 14 [Source:HGNC Symbol;Acc:HGNC:10058]) HSP 1 Score: 149.828 bits (377), Expect = 1.258e-39 Identity = 122/439 (27.79%), Postives = 191/439 (43.51%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQ-------IQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------------------------FGTHSN-----EFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKE--EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + D+ N FK +QN+ + I F PP+ +N +L WLS L + + +L +E G VL+ QFL+ ETL +L FG + E ++D + D + L + + D++ FN+ +F CS+C K G C+ F +C+HV+C AC DY++IQI++G + +C+ C + ++++++ E F R+D+L+L L CPR C++ V+ E G GIC C F FC C++ Y G C + K++ + + K +K E+E N KSCP C EK+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 11 DELLALASIYDGDEFRKAESVQGGETRIYLDLPQN-FKIFVSGNSNECLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQV--QCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHF 446
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Human
Match: RNF14 (ring finger protein 14 [Source:HGNC Symbol;Acc:HGNC:10058]) HSP 1 Score: 149.828 bits (377), Expect = 1.258e-39 Identity = 122/439 (27.79%), Postives = 191/439 (43.51%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQ-------IQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------------------------FGTHSN-----EFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKE--EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + D+ N FK +QN+ + I F PP+ +N +L WLS L + + +L +E G VL+ QFL+ ETL +L FG + E ++D + D + L + + D++ FN+ +F CS+C K G C+ F +C+HV+C AC DY++IQI++G + +C+ C + ++++++ E F R+D+L+L L CPR C++ V+ E G GIC C F FC C++ Y G C + K++ + + K +K E+E N KSCP C EK+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 11 DELLALASIYDGDEFRKAESVQGGETRIYLDLPQN-FKIFVSGNSNECLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQV--QCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHF 446
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Human
Match: RNF14 (ring finger protein 14 [Source:HGNC Symbol;Acc:HGNC:10058]) HSP 1 Score: 139.813 bits (351), Expect = 6.066e-37 Identity = 92/299 (30.77%), Postives = 144/299 (48.16%), Query Frame = 2
Query: 398 SGDGVLWKCFQFLENETLTFLFGTHSN---EFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKE--EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
S V + Q N L F S+ E ++D + D + L + + D++ FN+ +F CS+C K G C+ F +C+HV+C AC DY++IQI++G + +C+ C + ++++++ E F R+D+L+L L CPR C++ V+ E G GIC C F FC C++ Y G C + K++ + + K +K E+E N KSCP C EK+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 24 SQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQV--QCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHF 320
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Celegans
Match: F56D2.5 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q20871]) HSP 1 Score: 100.523 bits (249), Expect = 7.934e-23 Identity = 88/364 (24.18%), Postives = 158/364 (43.41%), Query Frame = 2
Query: 236 NNQEFFKINFFPPISINLSF-DKYSELLD--ISLLCIWLSDDLLETVRIKVISLLKESGD-GVLWKCFQFLENETLTFLFGTHSNEFVLDIHRMIDETNGKLLYESLK----DYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNG--NLKFECMI--CGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCP--RCEMTVLVEGEEFGI--CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIK--FSNYLEKEEKVNAEL--------ENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLAPNC 1249
+Q ++ PPI + + Y + + L W++ + + + ++ + +E+ VL+ C+Q T+ L ++ + +++++ ESLK E F N+++DC VC ++ G +C++F C HVFC +C +YY I I G + C+ C + + +++ + +E F +++ +L + ++E CP C+M + + + C C + FC CK + G C + N + + + Y EK K E EN K CP C EK +GCNKM C+ C FC+LC K L+ PY H+ +C
Sbjct: 61 GDQFHLPLDILPPIRLKFHLPNDYPTVSSPKLELESYWMNQEQMTSCETELAKICEENQMMEVLFMCYQ-----TIIDLMAQNTPK-IINLNEACALNRQGETIESLKMKILQKEEEAVEEQFVNTLYDCQVCFESQMGQHCIKFQPCSHVFCKSCTFNYY-ISIAKGFVSKPMSCLAEGCENEAQQGMVQEALGEELFAKYEAHMLEKAIREMDDSMECPNENCQMVAYLTDSQRNLVECSYCNYSFCNLCKGTFHGVSRCKFRKEDEERIMKEWNEADEAGKEEMYKRYGEKNMKALEERFLNRGWLEENSKQCPKCLVYIEKDEGCNKMHCTKCNASFCWLCSKTLNNVDPYSHYSEKGSC 417
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Celegans
Match: F56D2.2 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:Q20874]) HSP 1 Score: 86.6557 bits (213), Expect = 3.490e-18 Identity = 88/351 (25.07%), Postives = 142/351 (40.46%), Query Frame = 2
Query: 257 INFFPPISINLSF-DKYSELLD--ISLLCIWLSDDLLETVRIKVISLLKESGD-GVLWKCFQFLENETLTFLFGTHSNEFVLDIHRMIDETNGKLLYESLK----DYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPKCFFVFCIRCKMMYRG--SCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELE----------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLAPNC 1249
++ PPI + + Y + + L W++ + + + ++ + +E+ VL+ C+Q + + S+ +++++ N ESLK E F N++FDC VC ++ G +C++F C HVFC C DYY I G + + M C + E ++ KE D L Q L E C C F FC CK + G C K + + + + E++V +E N K CP C + EK +GC+KM C+ C YFC+LC + LDK PY+HF +C
Sbjct: 70 LDILPPIRLKFHLPNDYPSVSSPKLELESYWMNQEQMTSCETELARICEENQMMEVLFMCYQTIIDSI------DQSHLKIINLNEACALKNNGETIESLKKKILGKGEEAAEEHFVNTLFDCEVCYDSQMGQHCIKFQPCSHVFCKQCTFDYYRT-ISKGVVS-KAMQCLAEGCKSEAQQNTVKEAL--GDDLYAKQ----------------RFLAE------CSYCNFSFCNLCKQTFHGIERCKWKKGDKEL-LVKRWKDGDEAEKAEMCRQFGGEKRVEELVERFLNEEWLDSNSKPCPKCSVSIEKNEGCHKMHCTKCDTYFCWLCSETLDKEDPYKHFQGDGSC 387
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Celegans
Match: C17H11.6 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A0K3AYH3]) HSP 1 Score: 60.8474 bits (146), Expect = 1.168e-9 Identity = 54/249 (21.69%), Postives = 97/249 (38.96%), Query Frame = 2
Query: 509 DETNGKLLYESLKDYNNRMNE--STFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMT--KEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPK-------CFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKID--GCNKMTCSYCRIYFCYLC-RKILDKH 1213
++++ K L +SL D +E + +C +C G + C+H C AC Y ++ I ++ C C + +I+ ++ E+++ L + L E CP + + + CP+ C +FC CK + + C+ + + + F + K + K+CP CK K+D CN M C+ C FC+LC ++I D H
Sbjct: 23 EQSDEKQLSQSLPDTPKTPSEVGKKGKGKMKECPLCAAKMPGSAFPKLKGCQHRSCRACLRQYVELSITENRVEVPCPECSSYLHPNDIKMLIGDIPTLIEKYEAFSLRRYLMTEADARWCPAPDCGFVFIATKCAACPQLKCQRPDCGTLFCYHCKREWHSNQTCDEARRPEKRKSRGLAFEEIMRTGFHQSADSTLKPG----DVKACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWLCLKEISDLH 267
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Celegans
Match: C17H11.6 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A0K3AYH3]) HSP 1 Score: 60.8474 bits (146), Expect = 1.168e-9 Identity = 54/249 (21.69%), Postives = 97/249 (38.96%), Query Frame = 2
Query: 509 DETNGKLLYESLKDYNNRMNE--STFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMT--KEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPK-------CFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKID--GCNKMTCSYCRIYFCYLC-RKILDKH 1213
++++ K L +SL D +E + +C +C G + C+H C AC Y ++ I ++ C C + +I+ ++ E+++ L + L E CP + + + CP+ C +FC CK + + C+ + + + F + K + K+CP CK K+D CN M C+ C FC+LC ++I D H
Sbjct: 23 EQSDEKQLSQSLPDTPKTPSEVGKKGKGKMKECPLCAAKMPGSAFPKLKGCQHRSCRACLRQYVELSITENRVEVPCPECSSYLHPNDIKMLIGDIPTLIEKYEAFSLRRYLMTEADARWCPAPDCGFVFIATKCAACPQLKCQRPDCGTLFCYHCKREWHSNQTCDEARRPEKRKSRGLAFEEIMRTGFHQSADSTLKPG----DVKACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWLCLKEISDLH 267
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Celegans
Match: C17H11.6 (RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A0K3AYH3]) HSP 1 Score: 60.4622 bits (145), Expect = 1.773e-9 Identity = 58/261 (22.22%), Postives = 100/261 (38.31%), Query Frame = 2
Query: 479 EFVLDIHRMIDE--TNGKLLYESLKDYNNRMNE--STFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMT--KEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPK-------CFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKID--GCNKMTCSYCRIYFCYLC-RKILDKH 1213
E +L DE ++ K L +SL D +E + +C +C G + C+H C AC Y ++ I ++ C C + +I+ ++ E+++ L + L E CP + + + CP+ C +FC CK + + C+ + + + F + K + K+CP CK K+D CN M C+ C FC+LC ++I D H
Sbjct: 41 EMLLSSRNQDDEEQSDEKQLSQSLPDTPKTPSEVGKKGKGKMKECPLCAAKMPGSAFPKLKGCQHRSCRACLRQYVELSITENRVEVPCPECSSYLHPNDIKMLIGDIPTLIEKYEAFSLRRYLMTEADARWCPAPDCGFVFIATKCAACPQLKCQRPDCGTLFCYHCKREWHSNQTCDEARRPEKRKSRGLAFEEIMRTGFHQSADSTLKPG----DVKACPRCKTYIVKMDDGSCNHMVCTMCNAEFCWLCLKEISDLH 297
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Fly
Match: ari-2 (gene:FBgn0025186 transcript:FBtr0071774) HSP 1 Score: 62.7734 bits (151), Expect = 2.539e-10 Identity = 54/206 (26.21%), Postives = 82/206 (39.81%), Query Frame = 2
Query: 599 CSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNG-NLKFECM--ICGQDI-ENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEF----GICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLC 1192
C VC ++ G C H FC C Y++ QI G + + CM +C + E+L + V +++ + +K CP ++V+ E IC C FC RC M Y C + K L C + + + +NY+ + K CP C EK GCN M C C+ FC++C
Sbjct: 153 CPVCASSQLGDKFYSLA-CGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPEDLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQIIVQSSEISAKRAICKACHTGFCFRCGMDYHAPTDCQVIKKW------LTKCAD--DSETANYISA---------HTKDCPKCHICIEKNGGCNHMQCFNCKHDFCWMC 340
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Fly
Match: CG33144 (gene:FBgn0053144 transcript:FBtr0302517) HSP 1 Score: 58.5362 bits (140), Expect = 9.827e-9 Identity = 59/270 (21.85%), Postives = 90/270 (33.33%), Query Frame = 2
Query: 593 FDCSVCTIAKRGI-NCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFEC--MICGQD--IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLV-----EGEEFGIC-----------------------------------------PKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLAP 1243
F C +C I + + +C FC+ C Y + +I G + C C I EI + T ++ + LN+ ++ +K+ CPR CE V G+ IC P C FC CK Y + C+ + + + + + I F N L K CP C EK +GC +M C C+ FC+ C LD +H+ P
Sbjct: 777 FTCKLCLIDVEDVGEAMALQQCGCQFCIECMRAYVEFEISEGAYEISCPDATCPAQGAISLPEIANLTTTNLLKKHHRYRLNREIELDKTRTWCPRAGCETICTVGAAAQPGQSSVICQMDESPSTSQSYSPQQEVAGNGSTGAAAGNGAPVLSVSVHCPSCKDEFCGLCKKAYHPNISCDEFGRRL-----IADGQDDIGIPFDNEL------------IKCCPMCAVPIEKDEGCAQMMCKRCKHVFCWYCLASLDDDFLLRHYDKGP 1029
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Fly
Match: CG33144 (gene:FBgn0053144 transcript:FBtr0088254) HSP 1 Score: 58.5362 bits (140), Expect = 9.827e-9 Identity = 59/270 (21.85%), Postives = 90/270 (33.33%), Query Frame = 2
Query: 593 FDCSVCTIAKRGI-NCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFEC--MICGQD--IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLV-----EGEEFGIC-----------------------------------------PKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLAP 1243
F C +C I + + +C FC+ C Y + +I G + C C I EI + T ++ + LN+ ++ +K+ CPR CE V G+ IC P C FC CK Y + C+ + + + + + I F N L K CP C EK +GC +M C C+ FC+ C LD +H+ P
Sbjct: 777 FTCKLCLIDVEDVGEAMALQQCGCQFCIECMRAYVEFEISEGAYEISCPDATCPAQGAISLPEIANLTTTNLLKKHHRYRLNREIELDKTRTWCPRAGCETICTVGAAAQPGQSSVICQMDESPSTSQSYSPQQEVAGNGSTGAAAGNGAPVLSVSVHCPSCKDEFCGLCKKAYHPNISCDEFGRRL-----IADGQDDIGIPFDNEL------------IKCCPMCAVPIEKDEGCAQMMCKRCKHVFCWYCLASLDDDFLLRHYDKGP 1029
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Fly
Match: LUBEL (gene:FBgn0031857 transcript:FBtr0331221) HSP 1 Score: 55.8398 bits (133), Expect = 7.798e-8 Identity = 51/227 (22.47%), Postives = 88/227 (38.77%), Query Frame = 2
Query: 596 DCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLK-FECMICG---------QDIENLE--------IRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFG-ICPKCFFVFCIRCKM----MYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLE-KEEKVNAEL-ENYKSCPGCKQAFE-KIDGCNKMTCSYCRIYFCYLCRK 1198
+C +C + V KC H C CA Y+ +QI + ++ C C + E+LE ++ ++ + E + + + ++ L ++ +F C +C ++ ICP C V C +C+ + GS +C K N E + + V L +N CP CK + GC TC+ C+ FCY C +
Sbjct: 2419 ECELCMNSYPMNQMVSMLKCLHKCCKQCAKSYFTVQITDRSINDCSCPFCKLPELSNEAQHEDEHLEYFSNLDIFLKSILDNDVHELFQRKLRDRSLLQDPNFKWCIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS-----------------SCEAYLEWKRENDPELQAQGVQEHLAQNGIDCPKCKFRYSLARGGCMHFTCTQCKFEFCYGCAR 2628
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Fly
Match: LUBEL (gene:FBgn0031857 transcript:FBtr0331220) HSP 1 Score: 55.8398 bits (133), Expect = 7.807e-8 Identity = 51/227 (22.47%), Postives = 88/227 (38.77%), Query Frame = 2
Query: 596 DCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLK-FECMICG---------QDIENLE--------IRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFG-ICPKCFFVFCIRCKM----MYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLE-KEEKVNAEL-ENYKSCPGCKQAFE-KIDGCNKMTCSYCRIYFCYLCRK 1198
+C +C + V KC H C CA Y+ +QI + ++ C C + E+LE ++ ++ + E + + + ++ L ++ +F C +C ++ ICP C V C +C+ + GS +C K N E + + V L +N CP CK + GC TC+ C+ FCY C +
Sbjct: 2460 ECELCMNSYPMNQMVSMLKCLHKCCKQCAKSYFTVQITDRSINDCSCPFCKLPELSNEAQHEDEHLEYFSNLDIFLKSILDNDVHELFQRKLRDRSLLQDPNFKWCIQCSSGFFARPKQKRLICPDCGSVTCAQCRKPWERQHEGS-----------------SCEAYLEWKRENDPELQAQGVQEHLAQNGIDCPKCKFRYSLARGGCMHFTCTQCKFEFCYGCAR 2669
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Zebrafish
Match: CABZ01061592.1 (E3 ubiquitin-protein ligase RNF14-like [Source:NCBI gene;Acc:558876]) HSP 1 Score: 152.91 bits (385), Expect = 3.257e-41 Identity = 125/424 (29.48%), Postives = 189/424 (44.58%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQNNQEFFKINFFPPI--SINLSFDKYSELLDI-SLLCIWLSDDLLETVRIKVISLLKES-GDGVLWKCFQFLENETLTFLFGTHSNEF----------------------VLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMI---CGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEE-FGICPKCFFVFCIRCKMMYRGSCICNSV-VKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAE--------LENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF-GLAPNCY 1252
+EL AL IY + TE + I ++ +F+ L + +++ PP+ S L D S + +L IWLS + T+ ++ L +E+ G VL+ QFL+ ETL FL E LD + + L D+N + F ++F C +C G CV F +C+HV+C C +Y+ I IKNG ++F C +++ ++++E+F R+D+L+L L CPR C M V++E + GICP C FVFC CK Y G IC + ++M+ + +Y ++ E++ E +N K CP C+ EK DGCNKMTC C YFC+LC +L PY HF L CY
Sbjct: 10 DELLALASIYDEEEFHRTESSQKGEIHLCLELP-PDFRLLIKGQTRVEVDVSYLPPLVLSFELPTDYPSSSAPVFTLSSIWLSRVQIATLCKRLDELWEENRGSVVLFTWIQFLKEETLQFLNIQSPLEIQTNGVQPQCESAESQAAAAAVEELDQRAVQVADPHSDILTQLLDFNEAQKKKVFEATVFSCKICFSENLGSKCVLFKECQHVYCKTCVEEYFKILIKNGEVQFLSCPEPECTSLATPAQVKLLVSEEDFARYDRLLLQWSLNLMTDVVYCPRVTCCMAVMLESDRTVGICPSCQFVFCTTCKRTYHGLSICKEIQLRMLKEAREKEQELLEEKERV-DYEKRLEEIETEETLSEDWVTKNCKQCPICRTNIEKSDGCNKMTCFSCHAYFCWLCLAVLGGKDPYLHFRDLESPCY 431
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Zebrafish
Match: rnf14 (ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]) HSP 1 Score: 149.058 bits (375), Expect = 1.189e-39 Identity = 123/427 (28.81%), Postives = 183/427 (42.86%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQNNQEFFKINFFPPISINLSFDKYSELLDISLLCIWLSDDLLETVRI-----KVISLLKE-SGDGVLWKCFQFLENETLTFL---------------------------FGTHSNEFVLDIHRMIDETNGKL-LYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECM-----ICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEE-FGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKF----------SNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY + E + I ++ N FK L I+F PP+ LSFD + S +S L V+I K+ L +E G+ VL+ QFL+ ETL FL G S LD R + E + + + L D++ + F+ F C +C K G +C+ F +C+HV+C AC +Y+ IQIK+G K +C+ C +++ ++ ++EF R+D+L+L L CPR C M V+VE + GICP C + FC C+ Y G C + + ++ KF +E+ + N K CP C +K GCNKMTCS C+ YFC++C L + PY HF
Sbjct: 10 DELLALASIYDEEEFHRAESGKEGEIHLCLELPPN-FKLLVKGQKSAEHNISFLPPLV--LSFDLPDDYPSTSAPIFTISSKWLTRVQITALCRKLDELWEENQGNVVLFTWIQFLKEETLDFLGIQSPLEIQRSGSQPQCEPAQKHAADASGEKSKVQDLD-PRAVQEVDAQTDILTQLLDFDEAQKQRVFDGKAFCCGICYSEKLGCDCLLFKECEHVYCKACIKEYFQIQIKDG--KVQCLNCPEPKCASTATPTQVKLLVGEDEFARYDRLLLQSSLDLMADVVYCPRMSCCMAVMVEPDSTMGICPSCRYAFCTLCRRSYHGLSHCIATADELRSLRDEYLSSSEEGKKFLEKRFGKRVIQRAVEESFSTDWLKTNCKQCPCCGTNIQKAHGCNKMTCSSCQKYFCWICLGALSRVNPYSHF 430
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Zebrafish
Match: rnf14 (ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]) HSP 1 Score: 149.058 bits (375), Expect = 1.189e-39 Identity = 123/427 (28.81%), Postives = 183/427 (42.86%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQNNQEFFKINFFPPISINLSFDKYSELLDISLLCIWLSDDLLETVRI-----KVISLLKE-SGDGVLWKCFQFLENETLTFL---------------------------FGTHSNEFVLDIHRMIDETNGKL-LYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECM-----ICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEE-FGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKF----------SNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY + E + I ++ N FK L I+F PP+ LSFD + S +S L V+I K+ L +E G+ VL+ QFL+ ETL FL G S LD R + E + + + L D++ + F+ F C +C K G +C+ F +C+HV+C AC +Y+ IQIK+G K +C+ C +++ ++ ++EF R+D+L+L L CPR C M V+VE + GICP C + FC C+ Y G C + + ++ KF +E+ + N K CP C +K GCNKMTCS C+ YFC++C L + PY HF
Sbjct: 10 DELLALASIYDEEEFHRAESGKEGEIHLCLELPPN-FKLLVKGQKSAEHNISFLPPLV--LSFDLPDDYPSTSAPIFTISSKWLTRVQITALCRKLDELWEENQGNVVLFTWIQFLKEETLDFLGIQSPLEIQRSGSQPQCEPAQKHAADASGEKSKVQDLD-PRAVQEVDAQTDILTQLLDFDEAQKQRVFDGKAFCCGICYSEKLGCDCLLFKECEHVYCKACIKEYFQIQIKDG--KVQCLNCPEPKCASTATPTQVKLLVGEDEFARYDRLLLQSSLDLMADVVYCPRMSCCMAVMVEPDSTMGICPSCRYAFCTLCRRSYHGLSHCIATADELRSLRDEYLSSSEEGKKFLEKRFGKRVIQRAVEESFSTDWLKTNCKQCPCCGTNIQKAHGCNKMTCSSCQKYFCWICLGALSRVNPYSHF 430
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Zebrafish
Match: zmp:0000000524 (zmp:0000000524 [Source:ZFIN;Acc:ZDB-GENE-130530-527]) HSP 1 Score: 145.976 bits (367), Expect = 4.177e-39 Identity = 108/358 (30.17%), Postives = 172/358 (48.04%), Query Frame = 2
Query: 257 INFFPP--ISINLSFDKYSELLDI-SLLCIWLSDDLLETVRIKVISLLKES-GDGVLWKCFQFLENETLTFLF----------GTH----------SNEFVLDIHR---MIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKF-EC--MICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEE-FGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
++F P +S L D S + +L IWLS + + ++ L +E+ G VL+ QFL+ ETL FL G +N V ++ + + + + +L + L D+N + F ++F C +C G + V F +C+HV+C C DY++IQIK+G ++F C C +++ ++++E F R+D+L+L L CPR C M V++E + GICP C FVFC C +Y +CN + + N + N KE++V + +N K CP C +K GCNKM CS+C+ YFC++C L + PY HF
Sbjct: 23 VSFLPSTILSFELPTDYPSSSAPVFTLSSIWLSRVQITALCKRLDELWEENRGSVVLFTWIQFLKEETLQFLNIQSPLEIQTNGVQPQCESAECQAANAAVEELDQRAVQVADPHSDILTQ-LLDFNEAQKKKVFEATVFSCGICFTENLGSSFVLFNECQHVYCKTCVKDYFEIQIKDGKVQFLSCPEAECTSLATPAQVKLLVSQEVFARYDRLLLQWSLNLMTDVVYCPRKSCGMAVMLEPDRTMGICPSCKFVFCTLCNRVYHALALCNEIQR--------------ENERRENQ-RKEDEVWVK-QNSKQCPTCGVKIQKDMGCNKMACSFCQQYFCWICVSPLQTNDPYSHF 363
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Zebrafish
Match: zmp:0000000524 (zmp:0000000524 [Source:ZFIN;Acc:ZDB-GENE-130530-527]) HSP 1 Score: 144.436 bits (363), Expect = 1.567e-38 Identity = 106/357 (29.69%), Postives = 167/357 (46.78%), Query Frame = 2
Query: 257 INFFPP--ISINLSFDKYSELLDI-SLLCIWLSDDLLETVRIKVISLLKES-GDGVLWKCFQFLENETLTFLFGTHSNEF----------------------VLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKF-EC--MICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEE-FGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
++F P +S L D S + +L IWLS + + ++ L +E+ G VL+ QFL+ ETL FL E LD + + L D+N + F ++F+C +C G + V F +C+HV+C C DY++IQIK+G ++F C C +++ +++++ F R+D+L+L L CPR C M V++E + GICP C FVFC C +Y +C + + N + K + + KE++V + N K CP C +K GCNKMTCS C YFC++C +L+++ PY HF
Sbjct: 23 VSFLPSTILSFELPTDYPSSSAPVFTLSSIWLSRVQITALCKRLDELWEENRGSVVLFTWIQFLKEETLQFLNIQSPLEIQTNGVQLQCESAECQAAAAAVEELDQRAVQVADPHSDILTQLLDFNEAQKKKVFEATVFNCGICFTENLGSSFVLFNECQHVYCKTCVRDYFEIQIKDGKVQFLSCPEAECTSLATPAQVKLLVSQDVFARYDRLLLQWSLNLMTDIVYCPRKSCGMAVMLEPDRTMGICPSCKFVFCTLCNRVYHALALCKEIQE-----------ENERHEKLA-IIRKEDEVWVK-HNSKQCPTCAANIQKEMGCNKMTCSSCLEYFCWICFSVLNRNDPYSHF 366
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Xenopus
Match: ENSXETT00000012882.1 (ring finger protein 14 gene 4 [Source:NCBI gene;Acc:100485068]) HSP 1 Score: 160.614 bits (405), Expect = 1.263e-43 Identity = 119/432 (27.55%), Postives = 192/432 (44.44%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYES--------LTIFFSADIKLNEFKELQIQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------FGTH-----------------SNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLK-FECM--ICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNV--------YNIKF-SNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY+ +K +E L FSA I+ + ++ ++ ++F PP+ +N D +L C WLS L + ++ L +E +G VL+ QFL+ TL +L FG+ + + D + D + L + + D+N + F++ + C++C K G C F C+HV+C AC DYY +QI++G ++ C C +++ ++ +E F R+D+L+L L CPR C+ V++E G GIC C + FC CKM Y G C S K++++ + Y + LE+ E EN KSCP C +K +GCNK+TC+ C+ YFC+LC +L + PY H+
Sbjct: 11 DELLALASIYSEDEFKRSETAPGGEICVCLDLPPNFSAAIRGDSTAAAHTESFEDI--VSFLPPVILNFELPPGYPSTDPPAFTLSCKWLSPSQLALLCQRLDDLWEEYAGGVVLFAWMQFLKEGTLEYLKINSPYEIQVYGFGSQCIKNNSGISDSCSATGPAEAVIWDKRAIQDVESVAALIKCILDFNEAQQKKCFDSKSYMCNICFSEKLGSECTHFKDCQHVYCNACLKDYYTVQIQDGQVQALNCPEPKCSSVATPAQVKLLVGEELFSRYDRLLLQSSLDLMADVVYCPRPNCQTPVMLEPGGTMGICSNCNYAFCTLCKMTYHGVSACKLSAEKLMALRNEYLEADEAGKQFMEKRYGKRMIQKALEEMESKEWLEENAKSCPRCGTNIQKTEGCNKLTCTGCKQYFCWLCLGVLSRANPYSHY 440
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Xenopus
Match: ENSXETT00000028050.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV460778.1:14948:28369:1 gene:ENSXETG00000005845.1 transcript:ENSXETT00000028050.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 150.214 bits (378), Expect = 3.474e-40 Identity = 117/412 (28.40%), Postives = 185/412 (44.90%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQ-NNQEFFK-----INFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------FGTHSNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLK-FECM--ICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNA-EL-------ENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY+ +K +E I D+ N ++ + E+ ++F PPI ++ D +L C WLS L + ++ +L +E +G VL+ QFL+ TL +L FG + + D + D + L + + D+N + F++ + C +C K G C F KC+H++C AC DYY +QI++G ++ C C +++ ++ +E F R+D+L+L L CPR C V++E G E GIC C + FC CK+ Y CN + K++ + + K V A E+ +N K CP C+ EKIDGCN+M C+ C FC+LC +L PY HF
Sbjct: 11 DELLALASIYSEDEFKRSETAPGGEICVCLDLPPNFSVAIKGDCASNEYMGSFEDIVSFLPPIILDFELPPGYPSTDPPAFTLSCKWLSPSQLALLCQRLENLWEEYAGGVVLFAWMQFLKEGTLEYLKINSPYEIQLCEFGP---KLIWDKRAIQDVESVTALIDCILDFNEAQQKKFFDSKSYMCDICFSEKVGSECTHFKKCEHIYCNACLKDYYTVQIQDGQVQALNCPEPKCCSVATPAQVKLLVGEELFSRYDRLLLQSSLDLMADVVYCPRPNCRTPVMLEPGGEMGICSSCKYAFCTLCKLAYHAVAYCNITSEKLLLVRDEYLEADAAGKKLLERRYGKNVIVKAVEMRSFEWLEKNSKCCPSCRANVEKIDGCNRMFCTRCNKNFCWLCLAVLSNGDPYDHF 419
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Xenopus
Match: gpr156 (G protein-coupled receptor 156 [Source:Xenbase;Acc:XB-GENE-962217]) HSP 1 Score: 149.828 bits (377), Expect = 8.256e-40 Identity = 120/425 (28.24%), Postives = 185/425 (43.53%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQNNQEFFK--INFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------FG----------------THSNEFVLDIHRMIDETNG-KLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLK-FEC--MICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCP--RCEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISI----FGCLINCTNVYNIKFSNYL---EKEEKVNAELE-NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY+ +K +E I D+ N F + F+ ++F PPI +N D +L C WLS L + ++ L E +G VL+ QFL+ TL +L FG T E V+ R+I + L + + D+N + F++ + C++C + K G C F C+HV+C AC DYY +QI++G ++ C C +++ ++ +E F R+D+L+L L CP C+ ++E G GIC C + FC CKM Y G +CN + K+I + + ++ ++ E K LE N + CP C + +K GCNKM C C YFC+LC +L PY HF
Sbjct: 11 DELLALASIYSEDEFKRSETAPGGEICVCLDLPPN-FSDCASNEYMGSFESIVSFLPPIILNFELPPGYPSTDPPAFTLSCKWLSPSQLVLLCQRLDDLWVEYAGGVVLFAWMQFLKEGTLEYLKINSPYEIQLCEFGSQCIKNNSGISDSCSATGPAEAVIWDKRVIQDVESVTTLIDCILDFNEAQQKKCFDSKSYMCNICFLGKLGSECTHFKDCQHVYCNACLKDYYTVQIQDGQVQALNCPEPKCSSVATPAQVKLLVGEELFSRYDRLLLQSSLDLMADVVYCPLLNCQTPFMLEPGGTMGICSNCNYAFCTLCKMAYHGVAVCNITTEKLILVREEYLEADAAGKKLLEKRYGKHMILKAVERKSTEWLETNTQQCPNCNASIQKDGGCNKMICRKCNKYFCWLCFAVLSTENPYDHF 434
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Xenopus
Match: znf347 (zinc finger protein 347 [Source:Xenbase;Acc:XB-GENE-6039618]) HSP 1 Score: 147.132 bits (370), Expect = 8.377e-39 Identity = 120/429 (27.97%), Postives = 186/429 (43.36%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQ-NNQEFFK-----INFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------FG----------------THSNEFVLDIHRMIDETNG-KLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLK-FECM--ICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNA-EL-------ENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY+ +K +E I D+ N ++ + E+ ++F PPI ++ D +L C WLS L + ++ +L +E +G VL+ QFL+ TL +L FG T E V+ R I + L + + D+N + F++ + C +C K G C F KC+H++C AC DYY +QI++G ++ C C +++ ++ +E F R+D+L+L L CPR C V++E G E GIC C + FC CK+ Y CN + K++ + + K V A E+ +N K CP C+ EKIDGCN+M C+ C FC+LC +L PY HF
Sbjct: 11 DELLALASIYSEDEFKRSETAPGGEICVCLDLPPNFSVAIKGDCASNEYMGSFEDIVSFLPPIILDFELPPGYPSTDPPAFTLSCKWLSPSQLALLCQRLENLWEEYAGGVVLFAWMQFLKEGTLEYLKINSPYEIQLCEFGPKCIRNNSGISDSCSATGPAEAVIWDKRAIQDVESVTALIDCILDFNEAQQKKFFDSKSYMCDICFSEKVGSECTHFKKCEHIYCNACLKDYYTVQIQDGQVQALNCPEPKCSSVATPAQVKLLVGEELFSRYDRLLLQSSLDLMADVVYCPRPNCRTPVMLEPGGEMGICSSCKYAFCTLCKLAYHAVAYCNITSEKLLLVRDEYLEADAAGKKLLERRYGKNVIVKAVEMRSFEWLEKNSKRCPSCRANVEKIDGCNRMFCTRCNKNFCWLCLAVLSNGDPYDHF 439
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Xenopus
Match: ENSXETT00000035372.1 (E3 ubiquitin-protein ligase RNF14-like [Source:NCBI gene;Acc:101732063]) HSP 1 Score: 140.969 bits (354), Expect = 1.469e-36 Identity = 119/429 (27.74%), Postives = 184/429 (42.89%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQ-NNQEFFK-----INFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------FG----------------THSNEFVL-DIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLK-FECM--ICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNA-EL-------ENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY+ +K E I D+ N ++ + E+ ++F PPI ++ D +L C WLS L + ++ L E +G+ VL+ QFL+ TL +L FG T E V+ D + D + L + + D+N + F++ + C +C K G C F KC+H++C AC DYY +QI++G ++ C C +++ ++ +E F R+D+L+L L CPR C V++E G E GIC C + FC CK+ Y CN + K++ + + K V A E+ +N K CP C+ EKIDGCN+M C+ C FC+L +L PY HF
Sbjct: 10 DELLALSSIYSEDEFKRLETAPGGEICVCLDLPPNFSVAIKGDCASNEYMGSFEDIVSFLPPIILDFELPPGYPSTDPPAFTLSCKWLSPSQLALLCQRLDDLWVEYAGEVVLFAWMQFLKEGTLEYLKINSPYEIQLCEFGPKCIKNNLGISDSCSATGPAEAVIWDTRAIQDVESVTTLIDCILDFNEAQQKKCFDSKSYMCDICFSEKVGSECTHFKKCEHIYCNACLKDYYTVQIQDGQVQALNCPEPKCSSVATPAQVKLLVGEELFSRYDRLLLQSSLDLMADVVYCPRPNCRTPVMLEPGGEMGICSSCKYAFCTLCKLAYHAVAYCNITSEKLLLVRDEYLEADAAGKKLLERRYGKNVIVKAVEMRSFEWLEKNSKRCPSCRANVEKIDGCNRMFCTRCNKNFCWLYLAVLSNGDPYDHF 438
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Mouse
Match: Rnf14 (ring finger protein 14 [Source:MGI Symbol;Acc:MGI:1929668]) HSP 1 Score: 154.836 bits (390), Expect = 1.458e-41 Identity = 127/446 (28.48%), Postives = 194/446 (43.50%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFK-------ELQIQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL---------FGTH---------------------------SNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVY---NIKFSNYLEKE------EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + D+ N FK +QN+ + I F PP+ +N +L WLS L + + +L +E G VL+ QFL+ ETLT+L G+ E +D + D + L + + D+N FN+ +F CS+C K G +C+ F +CKHV+C AC DY++IQIK+G +K C+ C + ++++++ + F R+D+L+L L CPR C++ V+ E G IC C F FC C++ Y G C + LI+ N Y + +LE+ +K E+E N KSCP C +K+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 11 DELLALASIYDADEFRKAESVQGGETRIYLDLPQN-FKIFVSGNSNESLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGRVVLFAWMQFLKEETLTYLNIVSPFELKMGSQKKVQRRATAQASSSTELGVGGAAAADVDQEETVDERAVQDVESLSSLIQEILDFNQARQTKCFNSKLFLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVK--CLNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGLSPCKVTAEK------LIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYRHF 447
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Mouse
Match: Rnf14 (ring finger protein 14 [Source:MGI Symbol;Acc:MGI:1929668]) HSP 1 Score: 154.836 bits (390), Expect = 1.458e-41 Identity = 127/446 (28.48%), Postives = 194/446 (43.50%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFK-------ELQIQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL---------FGTH---------------------------SNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVY---NIKFSNYLEKE------EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + D+ N FK +QN+ + I F PP+ +N +L WLS L + + +L +E G VL+ QFL+ ETLT+L G+ E +D + D + L + + D+N FN+ +F CS+C K G +C+ F +CKHV+C AC DY++IQIK+G +K C+ C + ++++++ + F R+D+L+L L CPR C++ V+ E G IC C F FC C++ Y G C + LI+ N Y + +LE+ +K E+E N KSCP C +K+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 11 DELLALASIYDADEFRKAESVQGGETRIYLDLPQN-FKIFVSGNSNESLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGRVVLFAWMQFLKEETLTYLNIVSPFELKMGSQKKVQRRATAQASSSTELGVGGAAAADVDQEETVDERAVQDVESLSSLIQEILDFNQARQTKCFNSKLFLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVK--CLNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGLSPCKVTAEK------LIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYRHF 447
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Mouse
Match: Rnf14 (ring finger protein 14 [Source:MGI Symbol;Acc:MGI:1929668]) HSP 1 Score: 154.836 bits (390), Expect = 1.458e-41 Identity = 127/446 (28.48%), Postives = 194/446 (43.50%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFK-------ELQIQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL---------FGTH---------------------------SNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVY---NIKFSNYLEKE------EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + D+ N FK +QN+ + I F PP+ +N +L WLS L + + +L +E G VL+ QFL+ ETLT+L G+ E +D + D + L + + D+N FN+ +F CS+C K G +C+ F +CKHV+C AC DY++IQIK+G +K C+ C + ++++++ + F R+D+L+L L CPR C++ V+ E G IC C F FC C++ Y G C + LI+ N Y + +LE+ +K E+E N KSCP C +K+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 11 DELLALASIYDADEFRKAESVQGGETRIYLDLPQN-FKIFVSGNSNESLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGRVVLFAWMQFLKEETLTYLNIVSPFELKMGSQKKVQRRATAQASSSTELGVGGAAAADVDQEETVDERAVQDVESLSSLIQEILDFNQARQTKCFNSKLFLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVK--CLNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGLSPCKVTAEK------LIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYRHF 447
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Mouse
Match: Rnf14 (ring finger protein 14 [Source:MGI Symbol;Acc:MGI:1929668]) HSP 1 Score: 143.28 bits (360), Expect = 2.928e-38 Identity = 90/276 (32.61%), Postives = 138/276 (50.00%), Query Frame = 2
Query: 476 NEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVY---NIKFSNYLEKE------EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
E +D + D + L + + D+N FN+ +F CS+C K G +C+ F +CKHV+C AC DY++IQIK+G +K C+ C + ++++++ + F R+D+L+L L CPR C++ V+ E G IC C F FC C++ Y G C + LI+ N Y + +LE+ +K E+E N KSCP C +K+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 54 QEETVDERAVQDVESLSSLIQEILDFNQARQTKCFNSKLFLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVK--CLNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGLSPCKVTAEK------LIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYRHF 321
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Mouse
Match: Arih2 (ariadne RBR E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:1344361]) HSP 1 Score: 65.4698 bits (158), Expect = 6.311e-11 Identity = 58/244 (23.77%), Postives = 104/244 (42.62%), Query Frame = 2
Query: 485 VLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNG-NLKFECMICGQDIENLE--IRKVMTKEEF-ERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGI----CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLC 1192
+LD +R + +LL E+ N + T + C+VC R N + C+H FC +C + + +K+G + CM + E + ++ EE +++ + + ++ CP + +++ +E C +C VFC +C+ MY C ++ K L C + + + +NY+ + K CP C EK GCN M CS C+ FC++C
Sbjct: 104 ILDRYR---SNSAQLLVEARVQPNPSKHVPTAH-PPHHCAVCMQFVRKENLLSLA-CQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVFPLLPNEELRDKYRRYLFRDYVESHFQLQLCPGADCPMVIRVQEPRARRVQCNRCSEVFCFKCRQMYHAPTDCATIRKW------LTKCAD--DSETANYISA---------HTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMC 325
BLAST of RBR-type E3 ubiquitin transferase vs. UniProt/SwissProt
Match: sp|Q9JI90|RNF14_MOUSE (E3 ubiquitin-protein ligase RNF14 OS=Mus musculus OX=10090 GN=Rnf14 PE=1 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 1.020e-40 Identity = 127/446 (28.48%), Postives = 194/446 (43.50%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFK-------ELQIQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL---------FGTH---------------------------SNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVY---NIKFSNYLEKE------EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + D+ N FK +QN+ + I F PP+ +N +L WLS L + + +L +E G VL+ QFL+ ETLT+L G+ E +D + D + L + + D+N FN+ +F CS+C K G +C+ F +CKHV+C AC DY++IQIK+G +K C+ C + ++++++ + F R+D+L+L L CPR C++ V+ E G IC C F FC C++ Y G C + LI+ N Y + +LE+ +K E+E N KSCP C +K+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 11 DELLALASIYDADEFRKAESVQGGETRIYLDLPQN-FKIFVSGNSNESLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGRVVLFAWMQFLKEETLTYLNIVSPFELKMGSQKKVQRRATAQASSSTELGVGGAAAADVDQEETVDERAVQDVESLSSLIQEILDFNQARQTKCFNSKLFLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVK--CLNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSSCNFAFCTLCRLTYHGLSPCKVTAEK------LIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCTGCMQYFCWICMGSLSRANPYRHF 447
BLAST of RBR-type E3 ubiquitin transferase vs. UniProt/SwissProt
Match: sp|Q9UBS8|RNF14_HUMAN (E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens OX=9606 GN=RNF14 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.042e-39 Identity = 122/439 (27.79%), Postives = 191/439 (43.51%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQ-------IQNNQEFFKINFFPPISINLSFDKYSELLD---ISLLCIWLSDDLLETVRIKVISLLKE-SGDGVLWKCFQFLENETLTFL------------------------------FGTHSN-----EFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKE--EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + D+ N FK +QN+ + I F PP+ +N +L WLS L + + +L +E G VL+ QFL+ ETL +L FG + E ++D + D + L + + D++ FN+ +F CS+C K G C+ F +C+HV+C AC DY++IQI++G + +C+ C + ++++++ E F R+D+L+L L CPR C++ V+ E G GIC C F FC C++ Y G C + K++ + + K +K E+E N KSCP C EK+DGCNKMTC+ C YFC++C L + PY+HF
Sbjct: 11 DELLALASIYDGDEFRKAESVQGGETRIYLDLPQN-FKIFVSGNSNECLQNSGFEYTICFLPPLVLNFELPPDYPSSSPPSFTLSGKWLSPTQLSALCKHLDNLWEEHRGSVVLFAWMQFLKEETLAYLNIVSPFELKIGSQKKVQRRTAQASPNTELDFGGAAGSDVDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQV--QCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSSCNFAFCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEKLDGCNKMTCTGCMQYFCWICMGSLSRANPYKHF 446
BLAST of RBR-type E3 ubiquitin transferase vs. UniProt/SwissProt
Match: sp|Q9US46|ITT1_SCHPO (E3 ubiquitin-protein ligase itt1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=itt1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.032e-17 Identity = 75/279 (26.88%), Postives = 124/279 (44.44%), Query Frame = 2
Query: 548 DYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNL-KFEC--MICGQDIENL---EIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSC----ICNSVVKMISIF--------GCLINCTNVYNIKFSNYLEKEEKVNAELE-----NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFG-LAPNCYXXXXXXXXXXXXXKGNW 1303
D N ++ E F F C+VC G +C + T+C HV C +C DYY + I+ G + +C + CG+D L E+ ++ + R+ +L + + + + CPR C+ + G++ IC KC F FC C+ + G + K++ ++ + Y + + L ++ K + E E N + CP C + E+IDGC M C C +FC+LC L + PY+HF +CY +A NW
Sbjct: 159 DKNAKLLE--FQIRKFQCNVCFDEFNGTDCFQLTRCGHVSCQSCLRDYYTMCIQEGMFSQIKCIDLDCGKDAPVLTLKELESIVGVQLTNRYKELEEKRRYENDSNIIFCPRSFCQGPSKRDPGQKLAICQKCDFAFCSFCQATWHGDLSPCKLEGDSKKLVEMYLNYQENEPEKALELEKRYGKRIIDRLVEQVKNDEEAEKWVLLNGQRCPTCDRVVERIDGCCHMNC-LCGTHFCFLCGAYLMEQNPYKHFNDPVSSCYGMLFASAAEKQRFSENW 434
BLAST of RBR-type E3 ubiquitin transferase vs. UniProt/SwissProt
Match: sp|Q04638|ITT1_YEAST (Translation termination inhibitor protein ITT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ITT1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.430e-13 Identity = 87/381 (22.83%), Postives = 144/381 (37.80%), Query Frame = 2
Query: 311 LLDISLLCIWLSDDLLETVRIKVISLLKESGD----------GVLWKCFQFLENETLTFLFGTHSNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCV----EFTKCKHVFCLACAHDYYDIQIKNGNLK-FECMICGQDIENLE---------------------IRKVMTKEEFERWDKLILNQCLKEEKSF-----YNCPRCEMTVLVEGEEFGI--CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLIN--------------------CTNVYNIKFSNYLEK---EEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLA-PNCY 1252
++DI L W+S D + + K + L++E+ D +L F FL ++T LF I + + + Y+ K + + S + C +C ++G+ + E +H C CA Y+ I+ + C C LE +++V+ E ER++K+ NQ + C RC+ E + + C KC FVFC C + G N K +S+ +I V ++ ++YL + + + E N + CP CK E+ +GCNKM C C FC++C +L PY+HF A CY
Sbjct: 87 VMDIKSL--WISTDEKKMLIDKALRLVEETVDMSIEFADSFTSILILIFGFLIDDTAILLFPN-------GIRKCLTQDQ----YDLFKQISEEATLQKVSRSNYHCCICMEMEKGVRMIKLPCENANVEHYLCRGCAKSYFTAMIQENRISSVRCPQCEYKELKLEDFKSYKKMLKALFTPLIPVSFLKEVIDTELCERYEKMFYNQAATRLSKYCPYACVTCRRCDSWCTKEDLDDAMIQCQKCHFVFCFDCLHAWHG--YNNKCGKKVSLSTDIIEEYLDDTVTSYERKRKLEAKYGRRVLELEVNDYLAEKMLDLAIKKEGSNLQRCPKCKVVVERSEGCNKMKCEVCGTLFCFICGVLLYPEDPYEHFREAYSGCY 452
BLAST of RBR-type E3 ubiquitin transferase vs. UniProt/SwissProt
Match: sp|Q9SKC3|ARI9_ARATH (Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana OX=3702 GN=ARI9 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.176e-12 Identity = 68/241 (28.22%), Postives = 97/241 (40.25%), Query Frame = 2
Query: 527 LLYESLKDYNNRMNESTFNNSIFDCSVC--TIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGN--LKFECM--ICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEE---FGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSY-CRIYFCYLCRKILDKH 1213
LL E + D+N + C +C + + I V C H +C C Y +I++G L+ +C C + I V + E++ + IL +++ K CP C V G E + + C + FC C C++V K I F N E E K N L N K CP CK+ EK DGCN MTCS C FC++C K +H
Sbjct: 104 LLKEPVVDFNGGEKDKKCRKVNIQCGICFESYTREEIARV---SCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDMIEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAVEFGGSESSSYDVSCLCSYRFCWNCSEDAHSPVDCDTVSKWI----------------FKNQDESENK-NWMLANSKPCPECKRPIEKNDGCNHMTCSAPCGHEFCWICLKAYRRH 324
BLAST of RBR-type E3 ubiquitin transferase vs. TrEMBL
Match: A0A401P327 (RBR-type E3 ubiquitin transferase OS=Scyliorhinus torazame OX=75743 GN=scyTo_0005143 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 4.125e-46 Identity = 128/449 (28.51%), Postives = 201/449 (44.77%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKEL----QIQNNQEFFK--INFFPPISINLSFDK---YSELLDISLLCIWLSDDLLETVRIKVISLLKESGD-GVLWKCFQFLENETLTFLF----------------GTHSN----------------EFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELE-----------------------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFG 1234
+EL AL IY +K E I ++ N FK + + QN ++ + ++F PP+ +N +L C WL L + + + + K++G+ VL+ QFL+ ETL+FL GT+SN EF LD + D + + + D++ + FN+ +F CSVC K GI+C+ F +CKHV+C AC +Y++IQI++GN+ +C+ C + ++++++ +E F R+D+L+L L CPR C+ V++E G G CP C + FC C+M Y G C + +S YL+ +E LE N K CP C +K++GCNKMTC+ C+ YFC+LC + L K PY HF
Sbjct: 12 DELLALASIYEEDEFKRAESAPGGEISICLELPPN-FKVIVHGDEKQNKKDLIEYVVSFLPPLVLNFELPPDYPSGSAPKYTLSCKWLFQAQLSVLCVHLDRIWKDNGNCVVLFSWMQFLKEETLSFLLIKSPLEIQGNSEKKSDGTYSNNKDKEFGSRNKPKNLKEFPLDPRAIQDVESWACVLREILDFDQNQQQKVFNSKMFTCSVCFYEKLGIDCMHFKECKHVYCKACLKEYFEIQIRDGNV--QCLNCPEPKCTSIATPAQVKELVREETFARYDRLLLQSTLDLMTDVVYCPRTVCKSVVMLEPGNTMGFCPGCRYAFCALCEMAYHGISPCRLRAEKLSALR-------------DEYLKADESGRQRLEKSYGRRVLQKAVEELCSQEWLDKNSKPCPRCGTNIQKVNGCNKMTCTGCKQYFCWLCIRPLSKVNPYSHFS 444
BLAST of RBR-type E3 ubiquitin transferase vs. TrEMBL
Match: Q1RL49 (RBR-type E3 ubiquitin transferase OS=Ciona intestinalis OX=7719 GN=Ci-ZF(RING/C6HC)-7 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.285e-43 Identity = 111/376 (29.52%), Postives = 186/376 (49.47%), Query Frame = 2
Query: 236 NNQEFFKINFFPPISINLSF-DKYS--ELLDISLLCIWLSDDLLETVRIKVISLL-KESGDGVLWKCFQFLENETLTFLFGTHSNEFVLD---------------------IHRMIDETNG-KLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQ---DIENL--EIRKVMTKEEFERWDKLILNQCLKEEKSFYNCP--RCEMTVLVEGE-EFGICPKCFFVFCIRCKMMYRGSCIC----NSVVKMISIFGCL-----INCTNVYNIKFSNYLEKEEKVNAELEN-YKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+N+E F ++F PPI +N + D Y E +L C+WLS L + +K+ + KE G+ +L++ FQFL++++L+ L G + N + D R + + + +L +Y+ + + F S+F C++C + K+G +C++F C HV+C C Y++I I G + +IC + D L ++++ + K+ +ER++KL+L L CP C+ V++E E G CP C + FC+ CK+ Y G C + ++K+ + Y K + A + N K CPGC + EK+DGCNKMTC CR YFC++C +LD PY+H+
Sbjct: 58 HNKEHF-VSFLPPIQLNFALSDGYPSDEPPQFNLSCVWLSPSQLYELCLKLDEIWQKEEGNVILYEWFQFLQDDSLSIL-GINDNLHICDEFESSSQSSTIASSKPGINKPCKRGLQTAHSYAEILPTLLNYDQQKQQEIFFTSVFSCNICFVDKKGTDCLQFKDCGHVYCKQCITSYFEIHISEGTIT--SLICPEPDCDTTALPNQVKEAVNKDLYERYEKLLLQTTLDTMTDIVFCPLMHCQSAVIIEPEASIGQCPSCAYAFCVHCKLAYHGVSPCKIASHEIIKLCKEYESANEEKKKQMEKKYGRKVLCKALDDRATQAWMNNNTKPCPGCNASIEKLDGCNKMTCYKCRAYFCWICMHVLDCANPYRHY 429
BLAST of RBR-type E3 ubiquitin transferase vs. TrEMBL
Match: R4GDE8 (RBR-type E3 ubiquitin transferase OS=Anolis carolinensis OX=28377 GN=RNF14 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.770e-42 Identity = 131/440 (29.77%), Postives = 192/440 (43.64%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYK------------LTEFYESLTIFFSADIKLNEFKELQIQNNQEFFKINFFPPISINLSFDK-YSELLD--ISLLCIWLSDDLLETVRIKVISLLKESGDG--VLWKCFQFLENETLTFL------------------------------FGTHSNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQ-----DIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGE-EFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKE--EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY +K L + E T+ +S D K N +QN++ ++F PPI +N F Y + +L WLS + L T R K + L E G VL+ QFL+ ETL L G E L+ + D + L + D+++ E FN + DC +C K G C+ F C+HV+C AC DY++IQI++G + C+ C + ++++++ ++ F R+D+L+L L CPR C+ V+ E GIC C + FC CKM Y G C S K++ + + + K +K E+E N KSCP C EK+DGCNKMTCS C +FC+ C L K RPY+HF
Sbjct: 11 DELLALASIYDEDEFKRAPSGCGGEIRVLVDLPEDFTLLWSGDQKEN------LQNSKFECTVSFLPPIVLNFEFPADYPSISPPAFTLSSKWLSQEQL-TARCKHLDTLWEENRGSVVLFAWIQFLKEETLDCLNIASPYEPKIYGQEPEQNGTIQEDASNGATGGAMEQEESLNGRTVQDVGSLSTLIREIIDFDHAHQEKCFNTKMHDCKICFSEKLGSECMYFLDCRHVYCKACLKDYFEIQIRDGQV--HCLNCPELKCLSVATPGQVKELVEEKLFARYDRLLLQSTLDLMADMVYCPRPGCQTPVMQEPSCTMGICSSCNYAFCTLCKMTYHGVSPCKISAEKLVQLREEYLAADDTTKKFLEQRYGKRVIQKALEEMESKEWLETNSKSCPSCGTPIEKLDGCNKMTCSVCNKHFCWCCMGSLSKARPYEHF 441
BLAST of RBR-type E3 ubiquitin transferase vs. TrEMBL
Match: G1KNM7 (RBR-type E3 ubiquitin transferase OS=Anolis carolinensis OX=28377 GN=RNF14 PE=3 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 4.617e-42 Identity = 131/440 (29.77%), Postives = 192/440 (43.64%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYK------------LTEFYESLTIFFSADIKLNEFKELQIQNNQEFFKINFFPPISINLSFDK-YSELLD--ISLLCIWLSDDLLETVRIKVISLLKESGDG--VLWKCFQFLENETLTFL------------------------------FGTHSNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQ-----DIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGE-EFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEKE--EKVNAELE-------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY +K L + E T+ +S D K N +QN++ ++F PPI +N F Y + +L WLS + L T R K + L E G VL+ QFL+ ETL L G E L+ + D + L + D+++ E FN + DC +C K G C+ F C+HV+C AC DY++IQI++G + C+ C + ++++++ ++ F R+D+L+L L CPR C+ V+ E GIC C + FC CKM Y G C S K++ + + + K +K E+E N KSCP C EK+DGCNKMTCS C +FC+ C L K RPY+HF
Sbjct: 11 DELLALASIYDEDEFKRAPSGCGGEIRVLVDLPEDFTLLWSGDQKEN------LQNSKFECTVSFLPPIVLNFEFPADYPSISPPAFTLSSKWLSQEQL-TARCKHLDTLWEENRGSVVLFAWIQFLKEETLDCLNIASPYEPKIYGQEPEQNGTIQEDASNGATGGAMEQEESLNGRTVQDVGSLSTLIREIIDFDHAHQEKCFNTKMHDCKICFSEKLGSECMYFLDCRHVYCKACLKDYFEIQIRDGQV--HCLNCPELKCLSVATPGQVKELVEEKLFARYDRLLLQSTLDLMADMVYCPRPGCQTPVMQEPSCTMGICSSCNYAFCTLCKMTYHGVSPCKISAEKLVQLREEYLAADDTTKKFLEQRYGKRVIQKALEEMESKEWLETNSKSCPSCGTPIEKLDGCNKMTCSVCNKHFCWCCMGSLSKARPYEHF 441
BLAST of RBR-type E3 ubiquitin transferase vs. TrEMBL
Match: A0A3Q0K3F8 (RBR-type E3 ubiquitin transferase OS=Ciona intestinalis OX=7719 GN=zf(ring/c6hc)-7 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.259e-41 Identity = 108/375 (28.80%), Postives = 180/375 (48.00%), Query Frame = 2
Query: 236 NNQEFFKINFFPPISINLSF-DKYS--ELLDISLLCIWLSDDLLETVRIKVISLLKESGDGVLWKCFQFLENETLTFLFGTHSNEFVLD---------------------IHRMIDETNG-KLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQ---DIENL--EIRKVMTKEEFERWDKLILNQCLKEEKSFYNCP--RCEMTVLVEGE-EFGICPKCFFVFCIRCKMMYRGSCIC----NSVVKMISIFGCL-----INCTNVYNIKFSNYLEKEEKVNAELEN-YKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+N+E F ++F PPI +N + D Y E +L C+WLS +E G+ +L++ FQFL++++L+ L G + N + D R + + + +L +Y+ + + F S+F C++C + K+G +C++F C HV+C C Y++I I G + +IC + D L ++++ + K+ +ER++KL+L L CP C+ V++E E G CP C + FC+ CK+ Y G C + ++K+ + Y K + A + N K CPGC + EK+DGCNKMTC CR YFC++C +LD PY+H+
Sbjct: 58 HNKEHF-VSFLPPIQLNFALSDGYPSDEPPQFNLSCVWLSPS-------------QEEGNVILYEWFQFLQDDSLSIL-GINDNLHICDEFESSSQSSTIASSKPGINKPCKRGLQTAHSYAEILPTLLNYDQQKQQEIFFTSVFSCNICFVDKKGTDCLQFKDCGHVYCKQCITSYFEIHISEGTIT--SLICPEPDCDTTALPNQVKEAVNKDLYERYEKLLLQTTLDTMTDIVFCPLMHCQSAVIIEPEASIGQCPSCAYAFCVHCKLAYHGVSPCKIASHEIIKLCKEYESANEEKKKQMEKKYGRKVLCKALDDRATQAWMNNNTKPCPGCNASIEKLDGCNKMTCYKCRAYFCWICMHVLDCANPYRHY 415
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Cavefish
Match: zmp:0000000524 (ring finger protein 14 [Source:NCBI gene;Acc:103046046]) HSP 1 Score: 157.532 bits (397), Expect = 7.090e-43 Identity = 117/424 (27.59%), Postives = 188/424 (44.34%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQNNQEFFKINFFPPISINLSFDK---YSELLDISLLCIWLSDDLLETVRIKVISLLKES-GDGVLWKCFQFLENETLTFL--------FGTHSN-------------------EFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEE-FGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELE----------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY ++ E + I+ ++ N FK L + ++F PP+ ++ + + +L WLS L + ++ L KE+ G VL+ QFL+ ETL FL G+ S+ + LD +++ L L D++ + F+ F C +C K G C+ F +C+HV+C AC +Y++IQI++GN+ +C+ C + +++ ++ +++F R+D+L+L L CPR C M V++E E G+CP C + FC CK Y G C + N KF ++ + +E N K+CP C +K GCNKMTCS C YFC++C L K PY+HF
Sbjct: 10 DELLALASIYDEEEFRRAESGQEGEIYLCLELPPN-FKLLVNGERPVEYDVSFLPPLVLSFELPENYPSTSAPVFTLSSKWLSRLQLSALCKQLDKLWKENQGSVVLFTWIQFLKEETLEFLGLQSPLEITGSKSDRCKNEAAAKPAEGLEKRKQQQELDPRAVLEADPQADLLPQLLDFDEAQRQKVFDGKPFCCGICFSEKLGSGCMLFKECQHVYCKACMKEYFEIQIRDGNV--QCLNCPEPECTSVAMPSQVKLLVGEDDFARYDRLLLQSTLDRMADVMYCPRKTCCMAVMLEPETTMGLCPSCRYAFCTLCKRAYHGLSHCLPTADELRNLQEEYLAANKEEQKFMEQRYGKQVIQRAVEESFSRQWLEENSKNCPSCGTHIQKTQGCNKMTCSSCHQYFCWICLAPLSKVNPYKHF 430
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Cavefish
Match: rnf19b (ring finger protein 19B [Source:NCBI gene;Acc:103021791]) HSP 1 Score: 71.633 bits (174), Expect = 6.249e-13 Identity = 54/227 (23.79%), Postives = 93/227 (40.97%), Query Frame = 2
Query: 572 STFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEE-FERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEEFGICPK-------CFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKI-DG-CNKMTCSYCRIYFCYLCRK-ILDKH 1213
S + +C +C + + E C H CL C Y I+I ++ C C + + ++ ++ E++++ +L +CL + CP C V+ G CP+ C FC CK + + C+S + ++ ++ +Y ++ ++ K CP C K+ DG CN MTC+ C FC+LC K I D H
Sbjct: 104 SLGGQDLLECPLCLVRQPRDQLAELQGCSHRSCLCCLRQYLRIEITESRVQLSCPECAERLAPRQVALILDDPALLEKYEEFLLRRCLASDPDCRWCPAPDCGFAVIASG--CASCPRLVCRREGCGAEFCYHCKQAWHPNQTCDSARQQRALS------LRTHSTHSPSYTAEQ----GPTDDIKPCPRCGAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLH 318
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Cavefish
Match: si:ch211-278j3.3 (E3 ubiquitin-protein ligase RNF19B-like [Source:NCBI gene;Acc:103027424]) HSP 1 Score: 68.9366 bits (167), Expect = 4.537e-12 Identity = 51/219 (23.29%), Postives = 91/219 (41.55%), Query Frame = 2
Query: 590 IFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEEF-ERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPK-------CFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKI-DG-CNKMTCSYCRIYFCYLC-RKILDKH 1213
+ +C +C +++ + + C H C C Y I+I + C C + + ++R ++ ER+++ L + L + CP + + V CPK C FC C+ ++ C+ + + + + +Y FS E+ + E K+CP C K DG CN+M C+ C FC+LC ++I D H
Sbjct: 108 LVECPLCLLSQPRGHFPRLSSCPHRACADCLRQYLRIEISESRVGIACPQCPEALAPPDVRAILDDGALLERFEEFQLRRFLASDPDTRWCPAPDCSYAVIAYGCAECPKLSCGREGCDTEFCYHCRQLWHPDQTCDQARRQRARHTSGADASTLY--VFS------EEPGGDAEEIKACPRCGAYIMKTNDGSCNRMNCTVCACQFCWLCMQEITDVH 318
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Cavefish
Match: arih2 (ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:103035190]) HSP 1 Score: 64.3142 bits (155), Expect = 1.181e-10 Identity = 46/188 (24.47%), Postives = 83/188 (44.15%), Query Frame = 2
Query: 653 CKHVFCLACAHDYYDIQIKNG-NLKFECMI--CGQDIENLEIRKVMTKEEF-ERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGI----CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLC 1192
C+H FC +C + + +K+G + CM C + + ++ EE E++ + + ++ CP + ++++ +E C +C VFC +C+ MY C ++ K L C + + + +NY+ + K CP C EK GCN M CS C+ FC++C
Sbjct: 154 CQHSFCKSCWEQHCTVLVKDGVGVGISCMAQDCSLRMPEDFVLPLLPSEELKEKYRRYLFRDYVESHFQLQLCPGADCPIVIKVQEPRARRVQCSRCAEVFCFKCRQMYHAPTDCATIRKW------LTKCAD--DSETANYISA---------HTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMC 324
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Cavefish
Match: rnf217 (ring finger protein 217 [Source:NCBI gene;Acc:103021552]) HSP 1 Score: 54.299 bits (129), Expect = 1.790e-7 Identity = 50/230 (21.74%), Postives = 89/230 (38.70%), Query Frame = 2
Query: 590 IFDCSVCTIAK--RGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMI--CGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGI-----------CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFG 1234
+ C +C + R ++C C+ C C Y Q+ G C I C +E + + EE ++ + + + + S CP+C + ++G C KC FV+C +C + C K + +++ +E ++ N + CP CK ++ +GC+ MTC+ C FCY C +K+R + FG
Sbjct: 273 VLTCRICLDDRHSRPLHC-----CQKAVCEECLKTYISSQVLVGRTDIVCPITECSGFLEESVVVTHLASEELAKYKYFL--ELSRLDSSTKPCPQCSLFTSLKGRSLQAPSKAEHKYKIQCSKCQFVWCFKCHAPWHEGLKCREYRKGDKLL-----------RHWASVIEHGQR------NAQKCPRCKIHIQRTEGCDHMTCTQCNTNFCYRCG---EKYRHLRFFG 475
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Sea Lamprey
Match: zmp:0000000524 (zmp:0000000524 [Source:ZFIN;Acc:ZDB-GENE-130530-527]) HSP 1 Score: 145.591 bits (366), Expect = 6.203e-39 Identity = 113/397 (28.46%), Postives = 174/397 (43.83%), Query Frame = 2
Query: 266 FPPISINLSFD---KYSELLDISLLCIWLSDDLLETVRIKVISLLKES-GDGVLWKCFQFLENETLTFLF----------------------------------------GTHSNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNL-KFECM--ICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNI--KFSN-------YLEKE----------EKVNAE---LENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLA 1240
PP+ +N + ++ C WLS + L + + L +E+ G +L+ QFL+ +TL FL G H LD + + LY L DY+ + F+ +F C +C K G +CV + C+HV+C C Y+ +QI+ GN+ C C ++R+++ +E F R+D+L+L L CPR C+ VL+E + G CP+C F FC C+ Y G I C+I N+ NI K++N +LE+ E+V+++ +N K+CP C +K+DGCNKMTCS C++YFC+LC K L + PY HF A
Sbjct: 72 LPPLVMNFELPSDYPSTSPPQFTISCKWLSREQLSWLCHTMDELWQENRGMEILYTWSQFLKEDTLDFLRIAPPLEVKSIAGGTTRKRDHGKTVRAEAGPEDLVKTAAVDGGHQPR-TLDPRAIQTCESWSSLYGELLDYDQAQRQKVFSARVFSCHICLCEKLGSSCVNLSGCEHVYCRDCLSAYFQLQIQEGNVHSLTCPEPKCQTVATPSQVRELVGEELFSRYDRLLLQSSLDLMADVVYCPRTSCQTPVLLEPNKTMGHCPQCKFAFCNVCRHAYHG------------ISACIIKSENLENILKKYNNADAASRAFLEQRYGKHTIKRAIEEVHSKDWLAQNAKACPRCCTNIQKVDGCNKMTCSSCQLYFCWLCLKELSRANPYSHFNEA 455
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Sea Lamprey
Match: rnf19a (ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-9414]) HSP 1 Score: 64.3142 bits (155), Expect = 2.510e-11 Identity = 55/224 (24.55%), Postives = 96/224 (42.86%), Query Frame = 2
Query: 581 NNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEEF-ERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEEFGICPK-------CFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKI-DG-CNKMTCSYCRIYFCYLCRK-ILDKH 1213
+ +C +C + + + E C H CL C Y I+I + C C + + +I++++ ++++ +L + L + CP C V+ G CPK C FC CK M+ + C++ + S + +I+ ++ ++ +A+ + K CP C K+ DG CN MTC+ C FC+LC K I D H
Sbjct: 104 GSDALECPLCLVRRSAEHFPELLSCPHRSCLDCLRQYLRIEISESRVNICCPECAERLNPHDIQRILADATLMGKYEEFMLRRFLVADPDCRWCPAPDCGFAVIATG--CASCPKLTCEREGCGTEFCYHCKAMWHPNQTCDAARQQRSAT------LRLRSIQSASASYSQDGAHAD--DIKPCPRCAAYIMKMNDGSCNHMTCAVCGCEFCWLCMKEISDLH 317
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Sea Lamprey
Match: ankib1a (ankyrin repeat and IBR domain containing 1a [Source:NCBI gene;Acc:566524]) HSP 1 Score: 50.0618 bits (118), Expect = 8.270e-7 Identity = 51/213 (23.94%), Postives = 85/213 (39.91%), Query Frame = 2
Query: 650 KCKHVFCLACAHDYYDIQIKNGNLKFECMICGQ-------DIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCP--RCEMTVLVEGEEFGI-------CPKCF-----FVFCIRCKMMYRGSCICNS----VVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKH 1213
C H+FC C +Y +++I+ G K ++C IE +E+ ++ +E R+ + + + S CP RCE V + P FC C C C + + K++ + ++ +V +N L + N K CP CK +K DGCN M C+ C+ FC++C + KH
Sbjct: 344 PCGHLFCKKCWEEYLNMKIQEG--KAHSILCPAYDCYSLVPIETIEV--LVCREMARRYLQFDIKAFVDTNPSIRWCPVPRCEQAVRLALPGAAGGSAARAHTPTAVDCGSGHTFCWECLGEAHEPCDCGTWKQWLQKIVDMKPEELSGVSVAAEDAANCLWL-------ISNSKPCPSCKSPIQKNDGCNHMQCTKCKHDFCWICLEEWKKH 545
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007741.1 (pep scaffold:Pmarinus_7.0:GL477427:676:25209:1 gene:ENSPMAG00000006996.1 transcript:ENSPMAT00000007741.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 49.2914 bits (116), Expect = 1.615e-6 Identity = 52/212 (24.53%), Postives = 77/212 (36.32%), Query Frame = 2
Query: 599 CSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNL-KFEC--MICGQDIENLEIRKVMT--KEEFERWDKLILNQCLKEEKSFYNCPR---CEMTVLVEGE--EFGICPKCFFVFCIRCKMMYRGSC--ICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRK 1198
C +C + + C H C +C Y I L K C M C IR +M + E + + +L ++ + C C+ + +G C KC + C C + C CN + + G Y S+ L K A+L + K CP C EK +GC MTC+ C FC+ C K
Sbjct: 1393 CPICLGVTGEVELLAPLYCTHRCCKSCWRAYLKTSIDQNMLAKCTCPIMDCPAQPTGAFIRTMMEDDSDRLELYKRALLRGYVESCSNLAWCANPQGCDRVLCKDGTGGHAATCAKCHWSTCFSCSFL-EAHCPASCNQIAWWVDEGG-------YYEGMSSDALSKHL---AKLIS-KPCPSCHAQIEKNEGCLHMTCAKCNHSFCWRCLK 1592
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Yeast
Match: ITT1 (Protein that modulates the efficiency of translation termination; interacts with translation release factors eRF1 (Sup45p) and eRF3 (Sup35p) in vitro, contains a zinc finger domain characteristic of the TRIAD class of proteins [Source:SGD;Acc:S000004533]) HSP 1 Score: 74.3294 bits (181), Expect = 7.820e-15 Identity = 87/381 (22.83%), Postives = 144/381 (37.80%), Query Frame = 2
Query: 311 LLDISLLCIWLSDDLLETVRIKVISLLKESGD----------GVLWKCFQFLENETLTFLFGTHSNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCV----EFTKCKHVFCLACAHDYYDIQIKNGNLK-FECMICGQDIENLE---------------------IRKVMTKEEFERWDKLILNQCLKEEKSF-----YNCPRCEMTVLVEGEEFGI--CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLIN--------------------CTNVYNIKFSNYLEK---EEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLA-PNCY 1252
++DI L W+S D + + K + L++E+ D +L F FL ++T LF I + + + Y+ K + + S + C +C ++G+ + E +H C CA Y+ I+ + C C LE +++V+ E ER++K+ NQ + C RC+ E + + C KC FVFC C + G N K +S+ +I V ++ ++YL + + + E N + CP CK E+ +GCNKM C C FC++C +L PY+HF A CY
Sbjct: 87 VMDIKSL--WISTDEKKMLIDKALRLVEETVDMSIEFADSFTSILILIFGFLIDDTAILLFPN-------GIRKCLTQDQ----YDLFKQISEEATLQKVSRSNYHCCICMEMEKGVRMIKLPCENANVEHYLCRGCAKSYFTAMIQENRISSVRCPQCEYKELKLEDFKSYKKMLKALFTPLIPVSFLKEVIDTELCERYEKMFYNQAATRLSKYCPYACVTCRRCDSWCTKEDLDDAMIQCQKCHFVFCFDCLHAWHG--YNNKCGKKVSLSTDIIEEYLDDTVTSYERKRKLEAKYGRRVLELEVNDYLAEKMLDLAIKKEGSNLQRCPKCKVVVERSEGCNKMKCEVCGTLFCFICGVLLYPEDPYEHFREAYSGCY 452
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Yeast
Match: HEL1 (RING finger ubiquitin ligase (E3); involved in ubiquitination and degradation of excess histones; interacts with Ubc4p and Rad53p; null mutant sensitive to hydroxyurea (HU) [Source:SGD;Acc:S000001725]) HSP 1 Score: 67.3958 bits (163), Expect = 1.418e-12 Identity = 59/228 (25.88%), Postives = 93/228 (40.79%), Query Frame = 2
Query: 548 DYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEEFER-WDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENY-----KSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKH 1213
DYN+ E F N F C +C K +C H +C+ C Y ++ GN+ CM C ++N +I KVM + D I + K +++ CP + +V + P+ ++ Y CNS + F C + + K + K+ + +E+ N+ K CP C EK GCN M CS C+ FC++C H
Sbjct: 163 DYNSHFREVEFKND-FTCIICCDKKDTETFA--LECGHEYCINCYRHYIKDKLHEGNI-ITCMDCSLALKNEDIDKVMGHPSSSKLMDSSIKSFVQKHNRNYKWCPFADCKSIVHLRDTSSLPE-------YTRLHYSPFVKCNSFHRFC--FNCGFEVHSPADCKITTAWVKKARKESEILNWVLSHTKECPKCSVNIEKNGGCNHMVCSSCKYEFCWICEGPWAPH 377
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Nematostella
Match: EDO47022 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RN84]) HSP 1 Score: 145.206 bits (365), Expect = 1.124e-38 Identity = 110/384 (28.65%), Postives = 167/384 (43.49%), Query Frame = 2
Query: 245 EFFKINFFPPISINLSF-DKYSEL--LDISLLCIWLSDDLLETV--RIKVISLLKESGDGVLWKCFQFLENETLTFL-------FGTHSNEFV------LDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLK-FECMI--CGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEE-FGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELE-----------------------NYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFG-LAPNCY 1252
E + + PPI +N + Y + + +L C WL+ L + + I + GD ++++ QFL +E L L H + + +D + D + LL S+ +Y + F+ S F C VC K G C+ F C HVFC C Y+ +QI +G++K C C ++++V+++E F ++DK +L L CPR C+ VLV+ E G+CP C F FC C++ Y G + C I + ++ + YL+ E+ A L+ N CP C +K DGCNKMTC CR FC+LCR IL PY HF L C+
Sbjct: 62 ECIDLKYLPPIVLNFVMPENYPSIQPPEYTLSCKWLTRQQLSKLCKDLDEIWTDQGVGDVIIFRWTQFLMDEALEVLNIKSPMTVRFHRQQSIPLDSSLVDKRAVQDVASYSLLIASILEYEKQEKARVFDTSYFTCDVCFSEKPGSMCLAFHNCGHVFCCECMTGYFTVQINDGSVKALTCPTSKCESQALPSQVKRVVSEETFAKYDKFLLQSSLDGMSDITYCPRPDCQSPVLVDSESTIGLCPACSFAFCKICRLGYHG------------VSPCSIKNSEFRKLR-TEYLKATEEERALLDQRYGRDRLKKVFEEVVSEDWVKSNCTKCPSCSYQIQKFDGCNKMTCIKCRANFCWLCRSILLTTNPYLHFNKLGSQCF 432
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Nematostella
Match: EDO48096 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RK36]) HSP 1 Score: 62.7734 bits (151), Expect = 1.082e-10 Identity = 52/193 (26.94%), Postives = 73/193 (37.82%), Query Frame = 2
Query: 653 CKHVFCLACAHDYYDIQIKNG-NLKFECMICGQDIENLEIRKVMTKEEF-ERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFG----ICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKH 1213
C H FC +C ++ Q++ G + ECM C + + V+ + E++ + N +K CP LV EE IC KC +FC C Y C ++ K L C + E N N K CP C EK GCN M C C+ FC++C H
Sbjct: 137 CGHFFCDSCWSAHFASQLQIGVSSGIECMNCNLLVGETVVLNVLKGGKLREKFINFLFNDQIKTFSKLRWCPGINCGFLVRAEEPAAKRVICSKCNTMFCFSCGEKYHAPTDCATIRKW------LTKCE-----------DDSETANYITANTKDCPECGSCIEKNGGCNHMQCIKCKHDFCWMCMGTWKSH 312
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Nematostella
Match: EDO47093 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RN86]) HSP 1 Score: 63.1586 bits (152), Expect = 1.224e-10 Identity = 64/244 (26.23%), Postives = 96/244 (39.34%), Query Frame = 2
Query: 506 IDETNGKLLYESLKDYNNRMNESTFNNSIF--DCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMI--CGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEE-------FGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFG----CLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLC 1192
+ E N KL + +K R T + + +C +C R C H FC C Y QI G C C ++N+ I +T + ++ K LN+ L+ S+ CP +V G E + + KC ++C +C C K I G LIN E++E +N+ + K+CP C EK GCN MTC C+ FC++C
Sbjct: 513 VSEANEKLQQDLVKQAKIRSGIDTRDWFMVSKECGICFGDFRENKMTALMSCGHSFCTECWEFYLKSQISRGEGDIGCPGYNCDVTLDNVTIMS-LTPSWYPKFLKRKLNRALEMTSSWRWCPGKNCRQVVNGTELSPNSSAWSVLCKCGGIWCFKCGSQAHWPASCVEARKFYRIAGNYEKLLIN-------------ERKELINSVM--VKNCPSCHYPIEKHLGCNFMTCVMCKTNFCWIC 740
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Nematostella
Match: EDO37844 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEN1]) HSP 1 Score: 55.4546 bits (132), Expect = 3.683e-8 Identity = 46/199 (23.12%), Postives = 84/199 (42.21%), Query Frame = 2
Query: 653 CKHVFCLACAHDYYDIQIKNGNLKFEC--MICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEM-------TVLVEGEEFGICP--KCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENY-KSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKH 1213
C H FC +C H Y +QI++G+ +C +C I++ + ++ E E++ + +N L + + C +C T + E + +C +C RCK C+ + + +K+++ L + ++ + Y K CP C+ EK GC M C C+ FC+ C + KH
Sbjct: 549 CSHKFCNSCWHQYLTVQIRSGHSPLKCPGHMCDAIIDDTTVMSLVP-ELLEQFIRNKVNMKLCSGQQWQQCEKCAFYVKLVLPTCIANSTEVPVHVVCRCGNTWCSRCKDEPHWPASCSQAER--------------FWLKYADQLSEYQRKDLFYSVYIKRCPHCRYPIEKNGGCPHMYCILCKATFCWHCLTLFSKH 732
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Nematostella
Match: EDO37437 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFQ2]) HSP 1 Score: 51.6026 bits (122), Expect = 2.377e-7 Identity = 51/206 (24.76%), Postives = 84/206 (40.78%), Query Frame = 2
Query: 653 CKHVFCLACAHDYYDIQIKNGN-LKFECM--ICGQ--DIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGI----CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLAP 1243
C FC C Y I +G+ L+ C +C D+ EI ++ ++ F+ + K+ + ++ KS CP+ + +VE C +C + FC CK + C + IKF + EE L K+CP C+ ++ +GC +M C C+ FC+ C K LD +H+ P
Sbjct: 42 CGCFFCKECLKQYVAHAIADGSVLQIPCPDGVCPDKGDLMESEIADLIAEDLFQNFQKMRAIKEIQISKSKAFCPKPDCKGVVESIPGAAKEVCCSECGYSFCFACKGPWHPEKHCQN------------KGEKANGIKFFELVNGEE----VLVEIKACPTCQVLIQRDEGCAQMMCGNCKHIFCWHCLKGLDSDILLRHYDKGP 231
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Medaka
Match: zmp:0000000524 (ring finger protein 14 [Source:NCBI gene;Acc:101167638]) HSP 1 Score: 144.821 bits (364), Expect = 5.553e-38 Identity = 117/450 (26.00%), Postives = 197/450 (43.78%), Query Frame = 2
Query: 107 EELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQNNQEF-FKINFFPPISINLSFDKYSELLDISLLCI---WLSDDLLETVRIKVISLLKES-GDGVLWKCFQFLENETLTFL------------------------------------------------FGTHSNEFVLDIHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGE-EFGICPKCFFVFCIRCKMMYRGSCICN-SVVKMISIFGCLINCTNVYNIKFSNYLEK-----------EEKVNAE--LENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHF 1231
+EL AL IY + E + I ++ +FK + ++ Q + + F PP+ +N L + + W++ L T+ ++ L +E+ G +L+ QFL+ ETL FL G H ++ ++D L L D++ + F++ +F C +C K G +C+ F +C+HV+C AC +Y+ IQI++GN+ +C+ C + L++++++ +E F R+D+L+L L CPR C V+VE + GIC C FC CK+ Y G C ++ ++ ++ T+ + ++EK EE + + EN K CP C +K+DGCNKMTC+ C+ YFC+LC +L K PY HF
Sbjct: 10 DELLALASIYDEEEFHQAESAQGGEIQICLELP-PDFKVVVVKGEQTTEYAVCFLPPLVLNFELPGDYPSLSAPVFTLSSKWMTKAQLSTLCQRLDELWEENQGCVILFTWMQFLKEETLDFLGIKSPLEVNRNNTKLCGERRKTDPTAADVTKCDSKSEVAENKPEITDKLGQHPSKLDPRAVVLMDPRADPL--PQLLDFDEAQRQKVFDSKVFCCGICFSEKLGSHCLCFKECQHVYCNACMTEYFQIQIRDGNV--QCLNCPEPKCTSLATPLQVKQLVDEELFARYDRLLLQSTLDLMADVVYCPRQFCGTAVMVEPDTTMGICSACQHAFCTMCKLAYHGVSHCKFPAEELRNLRDEYLSATS----EGKKFMEKRFGKRVIQKAVEESFSRDWLTENCKCCPKCGTNIQKVDGCNKMTCTSCKQYFCWLCLGVLSKVNPYGHF 450
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Medaka
Match: ENSORLT00000014493.2 (E3 ubiquitin-protein ligase RNF14 [Source:NCBI gene;Acc:101172569]) HSP 1 Score: 97.0561 bits (240), Expect = 3.282e-21 Identity = 69/266 (25.94%), Postives = 107/266 (40.23%), Query Frame = 2
Query: 515 TNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLK-FECMICG--QDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPR--CEMTVLVE-GEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKS------------------------------------CPGCKQAFEKIDGCNKMTCSYCRIYFCY 1186
T+ ++L + +N E F ++FDC +C A G +CV+ C HVFC C ++ +QI GN++ C G +++ V+ +E F +D+L+L L CPR C +L+E +C +C F FC CK Y G+ C K+ G + + EE + A LE+YKS CP C EK GC+ M C++C +F +
Sbjct: 326 TSSQILLSQILIHNASQKEKVFRTTVFDCGICFTALLGSDCVQIHGCGHVFCQTCLREFCKVQITEGNVQGVTCPQAGCPAAPTPAQVKTVVGEELFSHYDRLLLQFTLDRMSDVIYCPRPSCSSVILLEKSSNVALCSECHFAFCTTCKKNYHGASKCYEEKKIQEESGTTPELS---------MPQSEEGIKALLEDYKSGSKERRRLLDRRYGSAILASLEDNLNEMWKIDNTQPCPHCYIPIEKNGGCSHMWCTHCNNFFVW 582
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Medaka
Match: si:ch211-278j3.3 (E3 ubiquitin-protein ligase RNF19A [Source:NCBI gene;Acc:101162972]) HSP 1 Score: 69.707 bits (169), Expect = 2.354e-12 Identity = 56/251 (22.31%), Postives = 100/251 (39.84%), Query Frame = 2
Query: 494 IHRMIDETNGKLLYESLKDYNNRMNESTFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEEF-ERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPK-------CFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKI-DG-CNKMTCSYCRIYFCYLC-RKILDKH 1213
+ R+ E+ G L S + + + +C +C +++ + + C H C C Y I+I + C C + + L++R ++ ER+++ L + L + CP + + V CPK C FC C+ ++ + C+ + + N +Y E+ + E K+CP C K DG CN+M C+ C FC+LC ++I D H
Sbjct: 93 VGRVSSESTGVLSLSSCS------QDKLLDEHLEECPLCLLSQPRCHFPRLSSCSHRACSDCLRQYLRIEISESRVGIACPQCPETLAPLDVRAILDDSALLERFEEYQLRRFLAADPDTRWCPAPDCSYAVIAYGCAECPKLSCGREGCDTEFCYHCRQLWHPNQTCDQARRQRARHTSGSNDPTLYVFN--------EEAGGDAEEIKACPRCGAYIMKTNDGSCNRMNCTVCACQFCWLCMQEITDVH 329
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Medaka
Match: ENSORLT00000035803.1 (ring finger protein 19B [Source:NCBI gene;Acc:101169466]) HSP 1 Score: 68.9366 bits (167), Expect = 4.751e-12 Identity = 54/223 (24.22%), Postives = 92/223 (41.26%), Query Frame = 2
Query: 584 NSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEE-FERWDKLILNQCLKEEKSFYNCPR--CEMTVLVEGEEFGICPK-------CFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKI-DG-CNKMTCSYCRIYFCYLCRK-ILDKH 1213
+++ +C +C + E C H CL C Y I+I ++ C C + + ++ ++ E++++ +L +CL + CP C V+ G CP+ C FC CK + + C+S + +++ SN+ + ++ K CP C K+ DG CN MTC+ C FC+LC K I D H
Sbjct: 123 SNLLECPLCLVRLPPEQLPELLGCSHRSCLCCLRQYLRIEITESRVQLSCPECAERLAPRQVADILDDTALLEKYEEFLLRRCLASDPDCRWCPAPDCGFAVIASG--CASCPRLVCRREGCGAEFCYHCKQAWHPNQTCDSARQQ--------RAQSLHT--HSNHSPSFTQEQGPADDIKPCPRCGAYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLH 333
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Medaka
Match: arih2 (ariadne RBR E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:101159099]) HSP 1 Score: 63.929 bits (154), Expect = 1.318e-10 Identity = 47/190 (24.74%), Postives = 84/190 (44.21%), Query Frame = 2
Query: 653 CKHVFCLACAHDYYDIQIKNG-NLKFECMICGQD-----IENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGI----CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLC 1192
C+H FC AC + + +K+G + CM QD E+ + + +E +++ + + ++ CP + ++++ +E C +C VFC +C+ MY C ++ K L C + + + +NY+ + K CP C EK GCN M CS C+ FC++C
Sbjct: 158 CQHYFCTACWEQHCTVLVKDGTGVGISCM--AQDCPLRMPEDFVLPLLQGEELKDKYRRYLFRDYIESHFRLQLCPGADCPIVIKVQEPRARRVQCSRCGEVFCFKCRQMYHAPTDCATIRKW------LTKCAD--DSETANYISA---------HTKDCPKCNICIEKNGGCNHMQCSKCKHDFCWMC 328
BLAST of RBR-type E3 ubiquitin transferase vs. Planmine SMEST
Match: SMESG000081048.1 (SMESG000081048.1) HSP 1 Score: 301.597 bits (771), Expect = 2.669e-102 Identity = 151/173 (87.28%), Postives = 152/173 (87.86%), Query Frame = 2
Query: 734 MICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLAPNCY 1252
MICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMI +KEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLAPNCY
Sbjct: 1 MICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMI---------------------KKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHRPYQHFGLAPNCY 152
BLAST of RBR-type E3 ubiquitin transferase vs. Planmine SMEST
Match: SMESG000061950.1 (SMESG000061950.1) HSP 1 Score: 62.7734 bits (151), Expect = 1.720e-10 Identity = 54/212 (25.47%), Postives = 96/212 (45.28%), Query Frame = 2
Query: 572 STFNNSIFDCSVC-TIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMI--CGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNC--PRCE-MTVLVEGEEFGICPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYL 1189
S N+ +F C C I +G V+ C H+FC C + + + +C+ C +I++ EIRK++ + ++E + + +N + + K+ ++C P C+ + EG + CP C + CI C ++++ S C N + Y+E + K Y CP C EKI GCN + CS C++ C++
Sbjct: 155 SLPNDEVFTCLTCLKIIPKGSG-VKLMNCYHMFCRDCLKGSIN---SSQIIPVKCLSAECNWEIQDREIRKILNERDYEIYHEKCMNLAISKMKNNFHCKTPNCKYFCIYDEGLKNFTCPICHSLNCINCNVVHKNSETCKQYQDGYP---------NTIDKHTVKYIEDQIKKGK----YMKCPACNCLLEKISGCNWVQCSNCKLELCWI 349
BLAST of RBR-type E3 ubiquitin transferase vs. Planmine SMEST
Match: SMESG000013684.1 (SMESG000013684.1) HSP 1 Score: 55.0694 bits (131), Expect = 6.829e-8 Identity = 47/212 (22.17%), Postives = 89/212 (41.98%), Query Frame = 2
Query: 575 TFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGI-----CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCR 1195
TF + + C +C + + + C H C C ++Y I + + ++ C +E+ EIR ++ ++ ++ +L L +EK Y+C T + + GI CP+C CI C+ ++ G C K+ + + +++ +E E + CPGC +K GC+ +TC C I C+ +
Sbjct: 295 TFTSEVTVCPICLVDYDPGDAIVLHSCLHTICKECLNNYL-INVNDAQVRCPTTNCIGLVEDQEIRAILNDSDYIKYQELGLRMAEAKEKFSYHCKEVNCTAWITYD--GIVRSYNCPRCKKENCIVCQGIHEGM-TCEEYQKVKANERQMNPADDLF---IKKMIESGEAM--------KCPGCGILVQKNRGCDGVTCRSCGIMMCWATK 491
BLAST of RBR-type E3 ubiquitin transferase vs. Planmine SMEST
Match: SMESG000013684.1 (SMESG000013684.1) HSP 1 Score: 55.0694 bits (131), Expect = 7.147e-8 Identity = 47/212 (22.17%), Postives = 89/212 (41.98%), Query Frame = 2
Query: 575 TFNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGI-----CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCR 1195
TF + + C +C + + + C H C C ++Y I + + ++ C +E+ EIR ++ ++ ++ +L L +EK Y+C T + + GI CP+C CI C+ ++ G C K+ + + +++ +E E + CPGC +K GC+ +TC C I C+ +
Sbjct: 282 TFTSEVTVCPICLVDYDPGDAIVLHSCLHTICKECLNNYL-INVNDAQVRCPTTNCIGLVEDQEIRAILNDSDYIKYQELGLRMAEAKEKFSYHCKEVNCTAWITYD--GIVRSYNCPRCKKENCIVCQGIHEGM-TCEEYQKVKANERQMNPADDLF---IKKMIESGEAM--------KCPGCGILVQKNRGCDGVTCRSCGIMMCWATK 478
BLAST of RBR-type E3 ubiquitin transferase vs. Planmine SMEST
Match: SMESG000069298.1 (SMESG000069298.1) HSP 1 Score: 54.299 bits (129), Expect = 1.124e-7 Identity = 52/217 (23.96%), Postives = 88/217 (40.55%), Query Frame = 2
Query: 578 FNNSIFDCSVCTIAKRGINCVEFTKCKHVFCLACAHDYYDIQIKNGNLKFECMICGQDIENLEIRKVMTKEEFERWDKLILNQCLKEEKSFYNCPRCEMTVLVEGEEFGI----CPKCFFVFCIRCKMMYRGSCICNSVVKMISIFGCLINCTNVYNIKFSNYLEKEEKVNAELENYKSCPGCKQAFEKIDGCNKMTCSYCRIYFCYLCRKILDKHR 1216
NN IF+C C V+ C H+ C C +Y I K C IE+ EI+ +++ E+E +++ ++N + ++ Y C + T + E + + CP C V C+ C +++ C K I + + E+ +K + CP C +K+ GCN + CS C + C+ IL HR
Sbjct: 176 MNNEIFECFSCYTCIAKGQGVKLRNCYHLVCKTCLENYLKT-ISKIPPKCPHAYCKLTIEDREIKAILSGNEYEIYNQKLINSIKSKLENRYQCQTPDCTYICEIIDVKMKTLKCPNCKMVNCLLCHAVHKNE-TCAKFRKRID--------STAFGATQRAIEERIKKGECMM-----CPDCNSLIQKVRGCNWIQCSSCGVELCW----ILQMHR 373 The following BLAST results are available for this feature:
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 4
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 2
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of RBR-type E3 ubiquitin transferase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30031537 ID=SMED30031537|Name=RBR-type E3 ubiquitin transferase|organism=Schmidtea mediterranea sexual|type=transcript|length=1341bpback to top protein sequence of SMED30031537-orf-1 >SMED30031537-orf-1 ID=SMED30031537-orf-1|Name=SMED30031537-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=389bp MKKILEELEALVEIYTNLNYKLTEFYESLTIFFSADIKLNEFKELQIQNNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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