Homeobox protein Hox-D12
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30031425 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Homeobox protein Hox-D12 vs. Ensembl Human
Match: HOXD12 (homeobox D12 [Source:HGNC Symbol;Acc:HGNC:5135]) HSP 1 Score: 49.6766 bits (117), Expect = 2.759e-6 Identity = 22/51 (43.14%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 340 SKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRL 492 +K + LEN + + FINR++R+E++ LNL ++V+ WFQNRR K +R+ Sbjct: 210 TKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRV 260
BLAST of Homeobox protein Hox-D12 vs. Ensembl Human
Match: LHX5 (LIM homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14216]) HSP 1 Score: 50.0618 bits (118), Expect = 3.070e-6 Identity = 22/72 (30.56%), Postives = 41/72 (56.94%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK--YIRSGKYARKING 561 ++ L+ + + R RE++A+E L + ++ WFQNRR K+RR+ Q+ +R+ + RS + R + G Sbjct: 192 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLGG 263
BLAST of Homeobox protein Hox-D12 vs. Ensembl Human
Match: HESX1 (HESX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4877]) HSP 1 Score: 47.3654 bits (111), Expect = 7.323e-6 Identity = 19/58 (32.76%), Postives = 41/58 (70.69%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQF 510 +++ +++LEN+++ + + RE++A++LNL ++++ WFQNRR K +R ++ QF Sbjct: 115 FTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRAKLKRSHRESQF 172
BLAST of Homeobox protein Hox-D12 vs. Ensembl Human
Match: HESX1 (HESX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4877]) HSP 1 Score: 47.3654 bits (111), Expect = 7.323e-6 Identity = 19/58 (32.76%), Postives = 41/58 (70.69%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQF 510 +++ +++LEN+++ + + RE++A++LNL ++++ WFQNRR K +R ++ QF Sbjct: 115 FTQNQIEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRAKLKRSHRESQF 172
BLAST of Homeobox protein Hox-D12 vs. Ensembl Human
Match: HOXC12 (homeobox C12 [Source:HGNC Symbol;Acc:HGNC:5124]) HSP 1 Score: 48.1358 bits (113), Expect = 9.240e-6 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 340 SKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRL 492 SK + LE + + FI R+RR E+++ LNL ++V+ WFQNRR K +RL Sbjct: 222 SKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRL 272
BLAST of Homeobox protein Hox-D12 vs. Ensembl Celegans
Match: vab-7 (Homeobox protein vab-7 [Source:UniProtKB/Swiss-Prot;Acc:Q93899]) HSP 1 Score: 50.8322 bits (120), Expect = 3.818e-7 Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 S+ + LE + +++RK R E+A ELNLP ++ WFQNRR KD+R Sbjct: 75 FSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKR 125
BLAST of Homeobox protein Hox-D12 vs. Ensembl Celegans
Match: ceh-14 (Homeobox protein ceh-14 [Source:UniProtKB/Swiss-Prot;Acc:P20271]) HSP 1 Score: 48.521 bits (114), Expect = 3.363e-6 Identity = 33/94 (35.11%), Postives = 47/94 (50.00%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQ----QFSSRKYIRSGKYARKINGCDDYYYYDQRPSDYG 606 +S ++ L+ YQTS+ R RE++A E L + V+ WFQNRR K++RL + + S+R S ING Y Y P D G Sbjct: 187 ISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQVWFQNRRAKEKRLKKDAGRRWKSSNRAESDSNSPIESINGQSPNYLYLDHPMDDG 280
BLAST of Homeobox protein Hox-D12 vs. Ensembl Fly
Match: Lim1 (gene:FBgn0026411 transcript:FBtr0331732) HSP 1 Score: 49.6766 bits (117), Expect = 1.738e-6 Identity = 31/119 (26.05%), Postives = 52/119 (43.70%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRSGKYARKI------NGCDD-----YYYYDQR-PSDYGLVEHVNAIPVNMPIIPESYMPV 672 +++L+ + + R RE++A+E LP+ ++ WFQN+R K+RR+ Q+ + + R G DD Y+ D + YG H + P P P MP Sbjct: 101 LEVLKTAFNQTPKPTRHIREQLAKETGLPMRVIQVWFQNKRSKERRMKQITSMGRPPFFGGARKMRGFPMNLSPGGLDDGPGFPYFAADAKFEFGYGGPFHPHDGPY-FPGHPGGPMPF 218
BLAST of Homeobox protein Hox-D12 vs. Ensembl Fly
Match: eve (gene:FBgn0000606 transcript:FBtr0088390) HSP 1 Score: 49.6766 bits (117), Expect = 1.829e-6 Identity = 20/43 (46.51%), Postives = 29/43 (67.44%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 LE + +++R RR E+A +LNLP ++ WFQNRR KD+R Sbjct: 85 LEKEFYKENYVSRPRRCELAAQLNLPESTIKVWFQNRRMKDKR 127
BLAST of Homeobox protein Hox-D12 vs. Ensembl Fly
Match: ro (gene:FBgn0003267 transcript:FBtr0085091) HSP 1 Score: 48.9062 bits (115), Expect = 3.056e-6 Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQ 504 LE + + +I+R RR E+AE L L +++ WFQNRR KD+R+ + Q Sbjct: 206 LEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQ 253
BLAST of Homeobox protein Hox-D12 vs. Ensembl Fly
Match: ro (gene:FBgn0003267 transcript:FBtr0085090) HSP 1 Score: 48.9062 bits (115), Expect = 3.056e-6 Identity = 21/48 (43.75%), Postives = 32/48 (66.67%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQ 504 LE + + +I+R RR E+AE L L +++ WFQNRR KD+R+ + Q Sbjct: 206 LEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQ 253
BLAST of Homeobox protein Hox-D12 vs. Ensembl Fly
Match: cad (gene:FBgn0000251 transcript:FBtr0335152) HSP 1 Score: 48.9062 bits (115), Expect = 3.933e-6 Identity = 21/46 (45.65%), Postives = 32/46 (69.57%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQ 498 LE Y TS +I +R+ E+A+ L+L +V+ WFQNRR K+R+ N+ Sbjct: 306 LEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNK 351
BLAST of Homeobox protein Hox-D12 vs. Ensembl Zebrafish
Match: cdx1a (caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]) HSP 1 Score: 50.8322 bits (120), Expect = 6.205e-7 Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDR-----RLNQVQQFSS 516 LE + S +I +R+ E+A LNL +V+ WFQNRR K+R RL QVQQ SS Sbjct: 144 LEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQNRRAKERKMNKKRLQQVQQSSS 200
BLAST of Homeobox protein Hox-D12 vs. Ensembl Zebrafish
Match: hesx1 (HESX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-130]) HSP 1 Score: 46.2098 bits (108), Expect = 1.564e-6 Identity = 22/61 (36.07%), Postives = 41/61 (67.21%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRS 534 + ILE+++Q +++ REE+A++L+L ++++ WFQNRR K +R ++ QF K + S Sbjct: 3 IKILESVFQVNSYPGIDIREELAKKLHLDEDRIQIWFQNRRAKLKRSHRESQFLMVKNVLS 63
BLAST of Homeobox protein Hox-D12 vs. Ensembl Zebrafish
Match: eve1 (even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]) HSP 1 Score: 48.9062 bits (115), Expect = 2.434e-6 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 LE Y ++++R RR E+A LNLP ++ WFQNRR KD+R Sbjct: 52 LEQEYCKESYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR 94
BLAST of Homeobox protein Hox-D12 vs. Ensembl Zebrafish
Match: eve1 (even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]) HSP 1 Score: 48.9062 bits (115), Expect = 2.458e-6 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 LE Y ++++R RR E+A LNLP ++ WFQNRR KD+R Sbjct: 51 LEQEYCKESYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR 93
BLAST of Homeobox protein Hox-D12 vs. Ensembl Zebrafish
Match: hoxd12a (homeobox D12a [Source:NCBI gene;Acc:100006598]) HSP 1 Score: 48.9062 bits (115), Expect = 2.953e-6 Identity = 21/44 (47.73%), Postives = 33/44 (75.00%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRL 492 LEN + + FINR++R+E+++ L L ++V+ WFQNRR K +RL Sbjct: 209 LENEFMMNEFINRQKRKELSDRLELSDQQVKIWFQNRRMKKKRL 252
BLAST of Homeobox protein Hox-D12 vs. Ensembl Xenopus
Match: klf2 (Kruppel-like factor 2 [Source:Xenbase;Acc:XB-GENE-485035]) HSP 1 Score: 50.8322 bits (120), Expect = 1.628e-6 Identity = 44/171 (25.73%), Postives = 76/171 (44.44%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK--YIRSGKYARKING-CDDYYYYDQRP-SDYGLVEHVNAIPVNMPIIPESYMPVTPEKLDPVNVTFVDNSPPASGTMPYWPASNWNNEDVMDLNKDPTTNDPVENRSYLYSIMH 852 ++ L+ + + R RE++A+E L + ++ WFQNRR K+RR+ Q+ +R+ + RS + R + G D+ P S YG + N P + P + + P + +++ NS P G+ P P L + + P EN+ Y I H Sbjct: 192 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLGGRLDESDILSSGPYSYYGDYQGDYYGSGNYDFFP--HGPPSSQTQSPADSSYLQNSGP--GSTPLGP-----------LESQLSGHHPSENQRYADMISH 347
BLAST of Homeobox protein Hox-D12 vs. Ensembl Xenopus
Match: ENSXETT00000008643.1 (mix-like endodermal regulator [Source:NCBI gene;Acc:100038097]) HSP 1 Score: 50.447 bits (119), Expect = 1.784e-6 Identity = 20/50 (40.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 340 SKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 S++ +D+LE +QT+ + + +RE +A+ + +P +V+ WFQNRR K+RR Sbjct: 97 SQNKLDVLEQFFQTNMYPDIHQRENLAKRIYIPESRVQVWFQNRRAKERR 146
BLAST of Homeobox protein Hox-D12 vs. Ensembl Xenopus
Match: limd2 (LIM domain containing 2 [Source:Xenbase;Acc:XB-GENE-986974]) HSP 1 Score: 50.447 bits (119), Expect = 2.217e-6 Identity = 20/46 (43.48%), Postives = 31/46 (67.39%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 +DILE +QT+ + + REE+A + +P +++ WFQNRR K RR Sbjct: 107 LDILEQFFQTNMYPDIHHREELARHIYIPESRIQVWFQNRRAKVRR 152
BLAST of Homeobox protein Hox-D12 vs. Ensembl Xenopus
Match: limd2 (LIM domain containing 2 [Source:Xenbase;Acc:XB-GENE-986974]) HSP 1 Score: 50.0618 bits (118), Expect = 3.108e-6 Identity = 24/71 (33.80%), Postives = 39/71 (54.93%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRSGKYARKINGC 564 +DILE +QT+ + + REE+A + +P +++ WFQNRR K RR Q + K + +G + G Sbjct: 180 LDILEQFFQTNMYPDIHHREELARHIYIPESRIQVWFQNRRAKVRR----QGAKATKPVLAGHHYSSTFGA 246
BLAST of Homeobox protein Hox-D12 vs. Ensembl Xenopus
Match: gfm2 (G elongation factor, mitochondrial 2 [Source:Xenbase;Acc:XB-GENE-1002407]) HSP 1 Score: 48.9062 bits (115), Expect = 6.384e-6 Identity = 36/140 (25.71%), Postives = 64/140 (45.71%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK--YIRSGKYARKI-----------NGCDDYYYYDQRPSDYGLVEHVNAIPVNMPIIPESYMPVTPEKLDPVNVTFVDNSPPAS 732 ++ L+ + + R RE++A+E L + ++ WFQNRR K+RR+ Q+ +R+ + RS + R + NG +Y D + YG + + P P + + PV++ FV +S PA Sbjct: 188 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLVDRLEPGELIPNG-PFSFYGDYQSEYYGPGSNYDFFPQG---------PPSSQAQTPVDLPFVPSSGPAG 317
BLAST of Homeobox protein Hox-D12 vs. Ensembl Mouse
Match: Hoxd12 (homeobox D12 [Source:MGI Symbol;Acc:MGI:96204]) HSP 1 Score: 52.373 bits (124), Expect = 2.473e-7 Identity = 24/56 (42.86%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 340 SKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQ 507 +K + LEN + + FINR++R+E++ LNL ++V+ WFQNRR K +R+ Q +Q Sbjct: 208 TKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVVQREQ 263
BLAST of Homeobox protein Hox-D12 vs. Ensembl Mouse
Match: Lhx5 (LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]) HSP 1 Score: 52.373 bits (124), Expect = 4.291e-7 Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK--YIRSGKYARKINGCDD---------YYYYDQRPSDY 603 ++ L+ + + R RE++A+E L + ++ WFQNRR K+RR+ Q+ +R+ + RS + R + G D Y YY SDY Sbjct: 192 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDY 286
BLAST of Homeobox protein Hox-D12 vs. Ensembl Mouse
Match: Hesx1 (homeobox gene expressed in ES cells [Source:MGI Symbol;Acc:MGI:96071]) HSP 1 Score: 47.7506 bits (112), Expect = 4.323e-6 Identity = 20/58 (34.48%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQF 510 +++ V++LEN+++ + + RE++A++LNL ++++ WFQNRR K +R + QF Sbjct: 115 FTQNQVEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRAKMKRSRRESQF 172
BLAST of Homeobox protein Hox-D12 vs. Ensembl Mouse
Match: Hesx1 (homeobox gene expressed in ES cells [Source:MGI Symbol;Acc:MGI:96071]) HSP 1 Score: 47.7506 bits (112), Expect = 4.323e-6 Identity = 20/58 (34.48%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQF 510 +++ V++LEN+++ + + RE++A++LNL ++++ WFQNRR K +R + QF Sbjct: 115 FTQNQVEVLENVFRVNCYPGIDIREDLAQKLNLEEDRIQIWFQNRRAKMKRSRRESQF 172
BLAST of Homeobox protein Hox-D12 vs. Ensembl Mouse
Match: Lhx1 (LIM homeobox protein 1 [Source:MGI Symbol;Acc:MGI:99783]) HSP 1 Score: 48.521 bits (114), Expect = 5.365e-6 Identity = 34/134 (25.37%), Postives = 59/134 (44.03%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK--YIRSGKYARKI-----------NGCDDYYYYDQRPSDY------------GLVEHVNAIPVNMPIIPESYMPVTP 678 ++ L+ + + R RE++A+E L + ++ WFQNRR K+RR+ Q+ +R+ + RS + R + NG + +Y S+Y G PV++P +P S TP Sbjct: 101 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLVDRLEPGELIPNG--PFSFYGDYQSEYYGPGGNYDFFPQGPPSSQAQTPVDLPFVPSSGPSGTP 232
BLAST of Homeobox protein Hox-D12 vs. UniProt/SwissProt
Match: sp|P23812|HXD12_MOUSE (Homeobox protein Hox-D12 OS=Mus musculus OX=10090 GN=Hoxd12 PE=2 SV=2) HSP 1 Score: 52.373 bits (124), Expect = 1.730e-6 Identity = 24/56 (42.86%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 340 SKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQ 507 +K + LEN + + FINR++R+E++ LNL ++V+ WFQNRR K +R+ Q +Q Sbjct: 208 TKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVVQREQ 263
BLAST of Homeobox protein Hox-D12 vs. UniProt/SwissProt
Match: sp|Q9IA16|HXD12_HETFR (Homeobox protein Hox-D12 OS=Heterodontus francisci OX=7792 GN=HOXD12 PE=3 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 2.171e-6 Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 340 SKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRL 492 +K + LEN + + FINR++R+E+++ LNL ++V+ WFQNRR K +RL Sbjct: 212 TKQQIAELENEFLANEFINRQKRKELSDRLNLSDQQVKIWFQNRRMKKKRL 262
BLAST of Homeobox protein Hox-D12 vs. UniProt/SwissProt
Match: sp|P61376|LHX5_RAT (LIM/homeobox protein Lhx5 OS=Rattus norvegicus OX=10116 GN=Lhx5 PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 3.001e-6 Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK--YIRSGKYARKINGCDD---------YYYYDQRPSDY 603 ++ L+ + + R RE++A+E L + ++ WFQNRR K+RR+ Q+ +R+ + RS + R + G D Y YY SDY Sbjct: 192 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDY 286
BLAST of Homeobox protein Hox-D12 vs. UniProt/SwissProt
Match: sp|P61375|LHX5_MOUSE (LIM/homeobox protein Lhx5 OS=Mus musculus OX=10090 GN=Lhx5 PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 3.001e-6 Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK--YIRSGKYARKINGCDD---------YYYYDQRPSDY 603 ++ L+ + + R RE++A+E L + ++ WFQNRR K+RR+ Q+ +R+ + RS + R + G D Y YY SDY Sbjct: 192 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDY 286
BLAST of Homeobox protein Hox-D12 vs. UniProt/SwissProt
Match: sp|P21711|MIX1_XENLA (Homeobox protein Mix.1 OS=Xenopus laevis OX=8355 GN=mix-a PE=2 SV=2) HSP 1 Score: 51.9878 bits (123), Expect = 3.533e-6 Identity = 25/81 (30.86%), Postives = 44/81 (54.32%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRSGKYARKINGCDDYYY 579 ++ +DILE +QT+ + + REE+A + +P +++ WFQNRR K RR Q + K I +G + +G + + Sbjct: 103 FTQAQLDILEQFFQTNMYPDIHHREELARHIYIPESRIQVWFQNRRAKVRR----QGAKATKPILAGHHYSGTSGANRAMF 179
BLAST of Homeobox protein Hox-D12 vs. TrEMBL
Match: A0A158RBF9 (Homeobox domain-containing protein OS=Thelazia callipaeda OX=103827 GN=TCLT_LOCUS4471 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.062e-7 Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 283 KTETKLSFPN-PIIGDTNRL----SKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRSG 537 + KLS P PII DTN + + H + LE Y TS ++NR RR EIA L L +V+ WFQNRR K+++ + Q F +R G Sbjct: 124 RAAAKLSVPKRPIIEDTNAIRTNFTTHQLTELEKEYYTSKYLNRTRRAEIASILQLNETQVKIWFQNRRMKEKKRQKEQAFLARGTCGGG 213
BLAST of Homeobox protein Hox-D12 vs. TrEMBL
Match: A0A151P5M4 (Homeobox protein XHOX-3-like OS=Alligator mississippiensis OX=8496 GN=Y1Q_0012109 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 7.016e-7 Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 184 NNSDIDESVKNLIQMSKEQIAKEKELSTSTKDPKTETKLSFPNPIIGDTNRLSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 +NSD VK + K+ +A++ LSTS D + + +F S+ + ILE Y ++++R RR E+A LNLP ++ WFQNRR KD+R Sbjct: 5 DNSDPGSDVK----LGKKSLAQKLPLSTSVGDHIRQHRTTF-----------SQEQLAILEQQYSKESYLSRARRYELASALNLPESTIKVWFQNRRMKDKR 91
BLAST of Homeobox protein Hox-D12 vs. TrEMBL
Match: A0A1I8CDY2 (Homeobox domain-containing protein OS=Rhabditophanes sp. KR3021 OX=114890 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 8.812e-7 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 1 Query: 265 TSTKDPKTETKLSFPNPIIGDTNRLSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK 522 T+TK P + K + + TN + H + LE Y TS ++NR RR EIA +LNL +V+ WFQNRR K ++ + Q+F +RK Sbjct: 161 TTTKAPTPKRKSLDQDSLTNRTN-FTTHQLTELEKEYHTSNYLNRGRRREIAGQLNLNETQVKIWFQNRRMKAKKRQREQEFLARK 245
BLAST of Homeobox protein Hox-D12 vs. TrEMBL
Match: A0A1U7RNT2 (homeobox protein XHOX-3-like OS=Alligator sinensis OX=38654 GN=LOC102368279 PE=4 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.016e-6 Identity = 36/102 (35.29%), Postives = 54/102 (52.94%), Query Frame = 1 Query: 184 NNSDIDESVKNLIQMSKEQIAKEKELSTSTKDPKTETKLSFPNPIIGDTNRLSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 +NSD VK + K+ +A++ LSTS D + +F S+ + ILE Y ++++R RR E+A LNLP ++ WFQNRR KD+R Sbjct: 5 DNSDPGSDVK----LGKKSLAQKLPLSTSAGDHIRRHRTTF-----------SQEQLAILEQQYSKESYLSRARRYELANALNLPESTIKVWFQNRRMKDKR 91
BLAST of Homeobox protein Hox-D12 vs. TrEMBL
Match: A0A158R517 (Homeobox domain-containing protein OS=Syphacia muris OX=451379 PE=4 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.478e-6 Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 283 KTETKLSFPN------PIIGDTNRLSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRS 534 +T TK + P P + TN S H + LE Y TS ++NR RR EIA L+L +V+ WFQNRR K+++ + Q+F +R I S Sbjct: 85 RTATKTTVPKRRVVDEPSVNRTN-FSTHQLTELEKEYYTSKYLNRTRRAEIAAILDLNETQVKIWFQNRRMKEKKRQKEQEFLARGMITS 173
BLAST of Homeobox protein Hox-D12 vs. Ensembl Cavefish
Match: HESX1 (HESX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4877]) HSP 1 Score: 51.9878 bits (123), Expect = 6.571e-8 Identity = 24/62 (38.71%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRSG 537 ++ILE+++Q +++ REE+AE+LNL ++++ WFQNRR K +R ++ QF K + +G Sbjct: 82 IEILESVFQVNSYPGIDLREELAEKLNLDEDRIQIWFQNRRAKLKRSHRESQFLMVKKVITG 143
BLAST of Homeobox protein Hox-D12 vs. Ensembl Cavefish
Match: hoxd12a (homeobox protein Hox-D12a-like [Source:NCBI gene;Acc:103047027]) HSP 1 Score: 51.6026 bits (122), Expect = 3.279e-7 Identity = 22/44 (50.00%), Postives = 34/44 (77.27%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRL 492 LEN + + FINR++R+E+++ LNL ++V+ WFQNRR K +RL Sbjct: 208 LENEFMINEFINRQKRKELSDRLNLSDQQVKIWFQNRRMKKKRL 251
BLAST of Homeobox protein Hox-D12 vs. Ensembl Cavefish
Match: eve1 (homeobox even-skipped homolog protein 1-like [Source:NCBI gene;Acc:103043644]) HSP 1 Score: 50.0618 bits (118), Expect = 1.002e-6 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 LE Y ++++R RR E+A LNLP ++ WFQNRR KD+R Sbjct: 53 LEQEYGKESYVSRARRCELAAALNLPETTIKVWFQNRRMKDKR 95
BLAST of Homeobox protein Hox-D12 vs. Ensembl Cavefish
Match: eve1 (homeobox even-skipped homolog protein 1-like [Source:NCBI gene;Acc:103043644]) HSP 1 Score: 50.0618 bits (118), Expect = 1.044e-6 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 LE Y ++++R RR E+A LNLP ++ WFQNRR KD+R Sbjct: 56 LEQEYGKESYVSRARRCELAAALNLPETTIKVWFQNRRMKDKR 98
BLAST of Homeobox protein Hox-D12 vs. Ensembl Cavefish
Match: lhx5 (LIM/homeobox protein Lhx5 [Source:NCBI gene;Acc:103047421]) HSP 1 Score: 50.0618 bits (118), Expect = 1.462e-6 Identity = 39/153 (25.49%), Postives = 67/153 (43.79%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK--YIRSGKYARKIN---------GCDDYYYYDQRPSDYGLVEHVNAIPVNMPIIPESYMPVTPEKLDPVNVTFVDNSPPASGTMPYWPASNWNNED 777 ++ L+ + + R RE++A+E L + ++ WFQNRR K+RR+ Q+ +R+ + R + R + G Y YY + DY A VN P + P + + P ++ +S SGT+ P S + D Sbjct: 159 LETLKAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRGPRRMRPLGGRLEDPDILGPGGYSYYGEYQGDY------YAPGVNYDFFP--HGPPSSQAQSPAEPPYLLSS--GSGTLDGGPGSAHHPTD 301
BLAST of Homeobox protein Hox-D12 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009847.1 (pep scaffold:Pmarinus_7.0:GL481168:3356:14379:1 gene:ENSPMAG00000008904.1 transcript:ENSPMAT00000009847.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 46.2098 bits (108), Expect = 3.674e-6 Identity = 23/74 (31.08%), Postives = 40/74 (54.05%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK---YIRSG-KYARKING 561 ++ L + + +R RE++A+E L + ++ WFQNRR K+RR+ Q+ R+ R G + AR + G Sbjct: 39 LETLRAAFAATPKPSRHVREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGGRRGHALFRGGARRARPLAG 112
BLAST of Homeobox protein Hox-D12 vs. Ensembl Nematostella
Match: OTXC (OtxC; Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKM4]) HSP 1 Score: 48.9062 bits (115), Expect = 7.717e-7 Identity = 23/65 (35.38%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIR 531 +K+ ++ILE ++ + + + REE+A ++NLP +V+ WF+NRR K R+L++ Q S K ++ Sbjct: 48 FTKNQLEILEELFAKTRYPDIFMREEVAIKINLPESRVQVWFKNRRAKLRQLSKGQSKQSPKPVK 112
BLAST of Homeobox protein Hox-D12 vs. Ensembl Nematostella
Match: MOXB (MoxB; Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SR28]) HSP 1 Score: 46.2098 bits (108), Expect = 8.982e-7 Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRL 492 +KH + LEN +Q + ++ R RR EIA L+L +V+ WFQNRR K +R+ Sbjct: 23 FTKHQIQELENEFQRNNYLTRLRRYEIAVSLDLTERQVKVWFQNRRMKWKRV 74
BLAST of Homeobox protein Hox-D12 vs. Ensembl Nematostella
Match: EDO38217 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDF9]) HSP 1 Score: 44.2838 bits (103), Expect = 1.466e-6 Identity = 21/51 (41.18%), Postives = 32/51 (62.75%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 S V+ LE ++ +++ K R EIAE LN+ ++V+ WFQNRR K +R Sbjct: 8 FSADQVNQLERVFAAQQYVSAKERAEIAETLNMTDDQVKIWFQNRRMKRKR 58
BLAST of Homeobox protein Hox-D12 vs. Ensembl Nematostella
Match: EDO42196 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S291]) HSP 1 Score: 44.2838 bits (103), Expect = 2.168e-6 Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQ 504 LE + + +I R RR E+A LNL +V+ WFQNRR KD+RL + Q Sbjct: 24 LELEFHQNEYITRSRRFELAACLNLTETQVKIWFQNRRAKDKRLEKAQ 71
BLAST of Homeobox protein Hox-D12 vs. Ensembl Nematostella
Match: EDO38249 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDF2]) HSP 1 Score: 43.1282 bits (100), Expect = 3.711e-6 Identity = 21/51 (41.18%), Postives = 31/51 (60.78%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 S V LE ++ +++ K R EIAE LN+ ++V+ WFQNRR K +R Sbjct: 7 FSADQVSQLERVFAARQYVSAKERAEIAETLNMTDDQVKIWFQNRRVKRKR 57
BLAST of Homeobox protein Hox-D12 vs. Ensembl Medaka
Match: hoxd12a (homeobox D12 [Source:NCBI gene;Acc:101162794]) HSP 1 Score: 50.0618 bits (118), Expect = 1.099e-6 Identity = 26/60 (43.33%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 340 SKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQ-FSS 516 SK + LEN + + FINR++R+E++++L+L ++V+ WFQNRR K +RL +Q FS+ Sbjct: 195 SKPQLAELENEFLMNEFINRQKRKELSDKLDLSDQQVKIWFQNRRMKKKRLMMREQAFSA 254
BLAST of Homeobox protein Hox-D12 vs. Ensembl Medaka
Match: eve1 (homeobox protein XHOX-3 [Source:NCBI gene;Acc:101169040]) HSP 1 Score: 48.521 bits (114), Expect = 2.656e-6 Identity = 21/43 (48.84%), Postives = 29/43 (67.44%), Query Frame = 1 Query: 361 LENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRR 489 LE Y ++++R RR E+A LNLP ++ WFQNRR KD+R Sbjct: 51 LEQEYGRESYVSRPRRCELATALNLPETTIKVWFQNRRMKDKR 93
BLAST of Homeobox protein Hox-D12 vs. Ensembl Medaka
Match: hoxc12a (homeobox protein Hox-C12a [Source:NCBI gene;Acc:101173058]) HSP 1 Score: 48.521 bits (114), Expect = 3.555e-6 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 1 Query: 340 SKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQ 507 SK + LE + + FI R+RR E+++ LNL ++V+ WFQNRR K +RL +Q Sbjct: 212 SKLQLAELEGEFMLNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKRLMLREQ 267
BLAST of Homeobox protein Hox-D12 vs. Ensembl Medaka
Match: lhx1a (LIM homeobox 1 [Source:NCBI gene;Acc:100049230]) HSP 1 Score: 48.9062 bits (115), Expect = 4.663e-6 Identity = 35/134 (26.12%), Postives = 59/134 (44.03%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK--YIRSGKYARKI-----------NGCDDYYYYDQRPSDY------------GLVEHVNAIPVNMPIIPESYMPVTP 678 ++ L+ + + R RE++A+E L + ++ WFQNRR K+RR+ Q+ +R+ + RS + R + NG + YY S+Y G PV++P +P S TP Sbjct: 193 LETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRTLVDRLEPGELIPNG--PFSYYGDYQSEYYGPGGNYDFFPQGPPSSQAQTPVDLPFVPSSGPTGTP 324
BLAST of Homeobox protein Hox-D12 vs. Ensembl Medaka
Match: lhx1b (LIM/homeobox protein Lhx1 [Source:NCBI gene;Acc:101155626]) HSP 1 Score: 48.521 bits (114), Expect = 5.487e-6 Identity = 36/152 (23.68%), Postives = 65/152 (42.76%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYI--RSGKYARKI------NGCDDYYYYDQRPSDY----GLVEHVNAIPVNMPIIPE--SYMPVTPEKLDPVNVTF----VDNSPPASGTMPYWP 753 ++ L+ + + R RE+++ E L + ++ WFQNRR K+RR+ Q+ S+R+++ RS + R + + YY P +Y G E+ P + P ++P T P+ T P +G +P Sbjct: 189 LETLKAAFAATPKPTRHIREQLSRETGLNMRVIQVWFQNRRSKERRMKQLSALSARRHVFFRSPRRMRAMGERLEPGELGHFSYYADYPGEYYGPGGNYEYFQGPPSSQAQTPADLGFVPSTVPAGTPLGGTMDHHHHHTGHPCAGEAQCFP 340
BLAST of Homeobox protein Hox-D12 vs. Planmine SMEST
Match: SMESG000003389.1 (SMESG000003389.1) HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0 Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 1 Query: 130 PIRLKSNKKASYASNNPVNNSDIDESVKNLIQMSKEQIAKEKELSTSTKDPKTETKLSFPNPIIGDTNRLSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRSGKYARKINGCDDYYYYDQRPSDYGLVEHVNAIPVNMPIIPESYMPVTPEKLDPVNVTFVDNSPPASGTMPYWPASNWNNEDVMDLNKDPTTNDPVENRSYLYSIMHDNYSNKSYTILRDSLEALI 909 PIRLKSNKKASYASNNPVNNSDIDESVKNLIQMSKEQIAKEKELSTSTKDPKTETKLSFPNPIIGDTNRLSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRSGKYARKINGCDDYYYYDQRPSDYGLVEHVNAIPVNMPIIPESYMPVTPEKLDPVNVTFVDNSPPA GTMPYWPASNWNNEDVMDLNKDPTTNDPVENRSYLYSIMHDNYSNKSYTILRDSLEALI Sbjct: 12 PIRLKSNKKASYASNNPVNNSDIDESVKNLIQMSKEQIAKEKELSTSTKDPKTETKLSFPNPIIGDTNRLSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRKYIRSGKYARKINGCDDYYYYDQRPSDYGLVEHVNAIPVNMPIIPESYMPVTPEKLDPVNVTFVDNSPPAPGTMPYWPASNWNNEDVMDLNKDPTTNDPVENRSYLYSIMHDNYSNKSYTILRDSLEALI 271
BLAST of Homeobox protein Hox-D12 vs. Planmine SMEST
Match: SMESG000055068.1 (SMESG000055068.1) HSP 1 Score: 45.8246 bits (107), Expect = 7.734e-6 Identity = 21/55 (38.18%), Postives = 36/55 (65.45%), Query Frame = 1 Query: 337 LSKHVVDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQV 501 +K + ILE + T ++I + R+ +A+ LNL +++ WFQNRR K+++LN V Sbjct: 103 FNKSQLQILEKYFYTCSYIIGEERKRLAKSLNLSENQIKIWFQNRRTKEKKLNAV 157
BLAST of Homeobox protein Hox-D12 vs. Planmine SMEST
Match: SMESG000016568.1 (SMESG000016568.1) HSP 1 Score: 47.7506 bits (112), Expect = 7.844e-6 Identity = 20/69 (28.99%), Postives = 40/69 (57.97%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK-YIRSGKYARKI 555 +D L+ + + R RE++A++ L + ++ WFQNRR K+RR+ Q+ +R+ + R+ + R + Sbjct: 413 LDTLKAAFSATPKPTRHVREQLAQDTGLTMRVIQVWFQNRRSKERRMKQLSAMGARRPFFRNARRMRSL 481
BLAST of Homeobox protein Hox-D12 vs. Planmine SMEST
Match: SMESG000043039.1 (SMESG000043039.1) HSP 1 Score: 47.7506 bits (112), Expect = 7.983e-6 Identity = 20/69 (28.99%), Postives = 40/69 (57.97%), Query Frame = 1 Query: 352 VDILENIYQTSTFINRKRREEIAEELNLPIEKVRNWFQNRRGKDRRLNQVQQFSSRK-YIRSGKYARKI 555 +D L+ + + R RE++A++ L + ++ WFQNRR K+RR+ Q+ +R+ + R+ + R + Sbjct: 413 LDTLKAAFSATPKPTRHVREQLAQDTGLTMRVIQVWFQNRRSKERRMKQLSAMGARRPFFRNARRMRSL 481 The following BLAST results are available for this feature:
BLAST of Homeobox protein Hox-D12 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of Homeobox protein Hox-D12 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Homeobox protein Hox-D12 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Homeobox protein Hox-D12 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Homeobox protein Hox-D12 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30031425 ID=SMED30031425|Name=Homeobox protein Hox-D12|organism=Schmidtea mediterranea sexual|type=transcript|length=1004bpback to top protein sequence of SMED30031425-orf-1 >SMED30031425-orf-1 ID=SMED30031425-orf-1|Name=SMED30031425-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=282bp MNYIYADNYYMYPDYYVGYYDPIRLKSNKKASYASNNPVNNSDIDESVKNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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