Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial

Overview
NameCoiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial
Smed IDSMED30031407
Length (bp)910
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial (SMED30031407) t-SNE clustered cells

Violin plots show distribution of expression levels for Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial (SMED30031407) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial (SMED30031407) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial (SMED30031407) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30031407

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30031407SMESG000003969.1 dd_Smed_v4_225_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30031407SMESG000003969.1 dd_Smed_v4_225_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30031407SMESG000003969.1 dd_Smed_v4_225_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30031407SMESG000003969.1 dd_Smed_v4_225_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30031407SMESG000003969.1 dd_Smed_v4_225_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30031407SMESG000003969.1 dd_Smed_v4_225_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30031407SMESG000003969.1 dd_Smed_v4_225_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30031407SMESG000003969.1 dd_Smed_v4_225_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Human
Match: CHCHD10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559])

HSP 1 Score: 55.0694 bits (131), Expect = 8.250e-9
Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 2 
Query:  182 QPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            QPG+ AQMATTAAGVAVGSAVGH +G+ALTG  SG +    Q   Q    P+       Q  PC   I + + C+  +SD  +C GFSEALK+CK ++GLS
Sbjct:   41 QPGLMAQMATTAAGVAVGSAVGHVMGSALTGAFSGGSSEPSQPAVQQAPTPAAPQP--LQMGPCAYEIRQFLDCSTTQSDLSLCEGFSEALKQCKYYHGLS 139
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Human
Match: CHCHD10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559])

HSP 1 Score: 55.0694 bits (131), Expect = 8.250e-9
Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 2 
Query:  182 QPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            QPG+ AQMATTAAGVAVGSAVGH +G+ALTG  SG +    Q   Q    P+       Q  PC   I + + C+  +SD  +C GFSEALK+CK ++GLS
Sbjct:   41 QPGLMAQMATTAAGVAVGSAVGHVMGSALTGAFSGGSSEPSQPAVQQAPTPAAPQP--LQMGPCAYEIRQFLDCSTTQSDLSLCEGFSEALKQCKYYHGLS 139
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Human
Match: CHCHD10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559])

HSP 1 Score: 53.9138 bits (128), Expect = 2.353e-8
Identity = 50/106 (47.17%), Postives = 63/106 (59.43%), Query Frame = 2 
Query:  182 QPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVN-----QQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            QPG+ AQMATTAAGVAVGSAVGH +G+ALTG  SG +    Q   Q          +       Q  PC   I + + C+  +SD  +C GFSEALK+CK ++GLS
Sbjct:   41 QPGLMAQMATTAAGVAVGSAVGHVMGSALTGAFSGGSSEPSQPAVQQPLALYPQAPTPAAPQPLQMGPCAYEIRQFLDCSTTQSDLSLCEGFSEALKQCKYYHGLS 146
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Human
Match: CHCHD10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:HGNC Symbol;Acc:HGNC:15559])

HSP 1 Score: 53.9138 bits (128), Expect = 2.353e-8
Identity = 50/106 (47.17%), Postives = 63/106 (59.43%), Query Frame = 2 
Query:  182 QPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVN-----QQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            QPG+ AQMATTAAGVAVGSAVGH +G+ALTG  SG +    Q   Q          +       Q  PC   I + + C+  +SD  +C GFSEALK+CK ++GLS
Sbjct:   41 QPGLMAQMATTAAGVAVGSAVGHVMGSALTGAFSGGSSEPSQPAVQQPLALYPQAPTPAAPQPLQMGPCAYEIRQFLDCSTTQSDLSLCEGFSEALKQCKYYHGLS 146
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Human
Match: CHCHD2 (coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21645])

HSP 1 Score: 48.9062 bits (115), Expect = 1.322e-6
Identity = 50/108 (46.30%), Postives = 64/108 (59.26%), Query Frame = 2 
Query:  161 TSYQQPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            +S   PRQPG+ AQMATTAAGVAVGSAVGHT+G A+TGG SG   N          Q         QQ PC   I++ + C + + D  +C GF+E LK+C+   GL+
Sbjct:   45 SSAAAPRQPGLMAQMATTAAGVAVGSAVGHTLGHAITGGFSG-GSNAEPARPDITYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGFNEVLKQCRLANGLA 151
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Zebrafish
Match: chchd10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753])

HSP 1 Score: 45.8246 bits (107), Expect = 8.169e-6
Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 2 
Query:  179 RQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSV---NQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            +QPG+ AQMATTAAGVAVGSAVGH +G+A+TG  SG + ++  +   +     Y   S    +Q  PC   + + + C   ++D  +C GF+EALK+CK   G++
Sbjct:   41 KQPGLMAQMATTAAGVAVGSAVGHVMGSAITGAFSGGSSSEAPKPAPT-----YQEPSRLPPSQSGPCLFEVRQFLDCATTQADLSLCEGFNEALKQCKLSSGVT 140
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Zebrafish
Match: chchd10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753])

HSP 1 Score: 45.8246 bits (107), Expect = 8.169e-6
Identity = 44/105 (41.90%), Postives = 65/105 (61.90%), Query Frame = 2 
Query:  179 RQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSV---NQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            +QPG+ AQMATTAAGVAVGSAVGH +G+A+TG  SG + ++  +   +     Y   S    +Q  PC   + + + C   ++D  +C GF+EALK+CK   G++
Sbjct:   41 KQPGLMAQMATTAAGVAVGSAVGHVMGSAITGAFSGGSSSEAPKPAPT-----YQEPSRLPPSQSGPCLFEVRQFLDCATTQADLSLCEGFNEALKQCKLSSGVT 140
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Xenopus
Match: gpat3 (glycerol-3-phosphate acyltransferase 3 [Source:NCBI gene;Acc:493261])

HSP 1 Score: 51.2174 bits (121), Expect = 1.649e-7
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 2 
Query:  176 PRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXX---YNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGL 481
            PRQPG+ AQMATTAAGVAVGSAVGHT+G A+TGG  G +  +P + + + Q+P+   Y     +Q  PCQ  +++ + C + +SD  +C GF E LK+C+   GL
Sbjct:   50 PRQPGLMAQMATTAAGVAVGSAVGHTIGHAITGGFGGGSSAEPARADITYQEPAQPMYQQQQQSQYTPCQYEMKQFLECAQNQSDLKLCEGFGEVLKQCRFANGL 154
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Xenopus
Match: luc7l3 (LUC7-like 3 pre-mRNA splicing factor [Source:Xenbase;Acc:XB-GENE-5815904])

HSP 1 Score: 46.2098 bits (108), Expect = 8.347e-6
Identity = 52/118 (44.07%), Postives = 69/118 (58.47%), Query Frame = 2 
Query:  158 VTSYQQPRQ-PGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQ-----NPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS*IM 493
            + S   P Q PG+ AQMATTAAGVAVGSAVGH +G ALTG  SG +    + V Q  Q      ++V QQ      PC   +++ + C   +SD  +C GFSE LK+CK   G+S ++
Sbjct:   32 LASAPAPSQGPGLMAQMATTAAGVAVGSAVGHVLGGALTGAFSGSSSEPAKPVAQEPQ----RSSAVPQQIPPHHGPCHYEMKQFLDCATTQSDLTLCEGFSEVLKQCKSNNGISSLL 145
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Mouse
Match: Chchd10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:MGI Symbol;Acc:MGI:2143558])

HSP 1 Score: 53.9138 bits (128), Expect = 1.364e-8
Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 2 
Query:  182 QPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            QPG+ AQMA+TAAGVAVGSAVGH +G+ALT   SG N    Q   Q       ++    Q  PC   I++ + C+  +SD  +C GFSEALK+CK  +GLS
Sbjct:   37 QPGLMAQMASTAAGVAVGSAVGHVMGSALTSAFSGGNSEPAQPAVQQAPARPASHP--LQMGPCSYEIKQFLDCSTTQSDLTLCEGFSEALKQCKYNHGLS 135
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Mouse
Match: Chchd10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:MGI Symbol;Acc:MGI:2143558])

HSP 1 Score: 53.9138 bits (128), Expect = 1.364e-8
Identity = 49/101 (48.51%), Postives = 63/101 (62.38%), Query Frame = 2 
Query:  182 QPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            QPG+ AQMA+TAAGVAVGSAVGH +G+ALT   SG N    Q   Q       ++    Q  PC   I++ + C+  +SD  +C GFSEALK+CK  +GLS
Sbjct:   37 QPGLMAQMASTAAGVAVGSAVGHVMGSALTSAFSGGNSEPAQPAVQQAPARPASHP--LQMGPCSYEIKQFLDCSTTQSDLTLCEGFSEALKQCKYNHGLS 135
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Mouse
Match: Chchd2 (coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:MGI Symbol;Acc:MGI:1261428])

HSP 1 Score: 50.447 bits (119), Expect = 2.581e-7
Identity = 49/104 (47.12%), Postives = 64/104 (61.54%), Query Frame = 2 
Query:  176 PRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQN--PCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGL 481
            PRQPG+ AQMATTAAGVAVGSAVGHT+G A+TGG SG   +          Q        NQQ+  PC   I++ + C + +SD  +C GF+E L++C+   GL
Sbjct:   50 PRQPGLMAQMATTAAGVAVGSAVGHTLGHAITGGFSG-GGSAEPAKPDITYQEPQGAQLQNQQSFGPCSLEIKQFLECAQNQSDVKLCEGFNEVLRQCRIANGL 152
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Mouse
Match: Zbed5 (zinc finger, BED type containing 5 [Source:MGI Symbol;Acc:MGI:1919220])

HSP 1 Score: 48.1358 bits (113), Expect = 2.300e-6
Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = 2 
Query:  176 PRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQN--PCQSNIEELIRCTERESDFGMCMGFSEALKECK 466
            PRQPG+ AQMATTAAGVAVGSAVGHT+G A+TGG SG   +          Q        NQQ+  PC   I++ + C + +SD  +C GF+E L++C+
Sbjct:   29 PRQPGLMAQMATTAAGVAVGSAVGHTLGHAITGGFSG-GGSAEPAKPDITYQEPQGAQLQNQQSFGPCSLEIKQFLECAQNQSDVKLCEGFNEVLRQCR 126
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. UniProt/SwissProt
Match: sp|Q8WYQ3|CHC10_HUMAN (Coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial OS=Homo sapiens OX=9606 GN=CHCHD10 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 3.962e-8
Identity = 51/101 (50.50%), Postives = 64/101 (63.37%), Query Frame = 2 
Query:  182 QPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            QPG+ AQMATTAAGVAVGSAVGH +G+ALTG  SG +    Q   Q    P+       Q  PC   I + + C+  +SD  +C GFSEALK+CK ++GLS
Sbjct:   41 QPGLMAQMATTAAGVAVGSAVGHVMGSALTGAFSGGSSEPSQPAVQQAPTPAAPQP--LQMGPCAYEIRQFLDCSTTQSDLSLCEGFSEALKQCKYYHGLS 139
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. UniProt/SwissProt
Match: sp|Q9D1L0|CHCH2_MOUSE (Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 OS=Mus musculus OX=10090 GN=Chchd2 PE=2 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 1.805e-6
Identity = 49/104 (47.12%), Postives = 64/104 (61.54%), Query Frame = 2 
Query:  176 PRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQN--PCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGL 481
            PRQPG+ AQMATTAAGVAVGSAVGHT+G A+TGG SG   +          Q        NQQ+  PC   I++ + C + +SD  +C GF+E L++C+   GL
Sbjct:   50 PRQPGLMAQMATTAAGVAVGSAVGHTLGHAITGGFSG-GGSAEPAKPDITYQEPQGAQLQNQQSFGPCSLEIKQFLECAQNQSDVKLCEGFNEVLRQCRIANGL 152
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. UniProt/SwissProt
Match: sp|Q9Y6H1|CHCH2_HUMAN (Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 OS=Homo sapiens OX=9606 GN=CHCHD2 PE=1 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 6.350e-6
Identity = 50/108 (46.30%), Postives = 64/108 (59.26%), Query Frame = 2 
Query:  161 TSYQQPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            +S   PRQPG+ AQMATTAAGVAVGSAVGHT+G A+TGG SG   N          Q         QQ PC   I++ + C + + D  +C GF+E LK+C+   GL+
Sbjct:   45 SSAAAPRQPGLMAQMATTAAGVAVGSAVGHTLGHAITGGFSG-GSNAEPARPDITYQEPQGTQPAQQQQPCLYEIKQFLECAQNQGDIKLCEGFNEVLKQCRLANGLA 151
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. TrEMBL
Match: A0A183MGX5 (Uncharacterized protein OS=Schistosoma margrebowiei OX=48269 GN=SMRZ_LOCUS15300 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.711e-16
Identity = 61/119 (51.26%), Postives = 73/119 (61.34%), Query Frame = 2 
Query:  128 NLPARPPPSNVTSY-QQPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGL 481
            NLPAR PPS V     QPRQPG+  QMA TA GVA+GS VGH V  AL+GG+ G+     Q           +  S   Q+PCQ +++ELIRC + +SD   C GFSEALKEC R YGL
Sbjct:   18 NLPARAPPSAVAQPPAQPRQPGLMGQMAATAGGVAIGSVVGHAVTGALSGGLGGNPAQPAQ----------ISSTSDQSQSPCQYHVDELIRCAQSQSDISACSGFSEALKECSRQYGL 126
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. TrEMBL
Match: A0A183NV94 (Uncharacterized protein OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS6030 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.083e-16
Identity = 61/119 (51.26%), Postives = 73/119 (61.34%), Query Frame = 2 
Query:  128 NLPARPPPSNVTSY-QQPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGL 481
            NLPAR PPS V     QPRQPG+  QMA TA GVA+GS VGH V  AL+GG+ G+     Q           +  S   Q+PCQ +++ELIRC + +SD   C GFSEALKEC R YGL
Sbjct:   18 NLPARAPPSAVAQPPAQPRQPGLMGQMAATAGGVAIGSVVGHAVTGALSGGLGGNPAQPAQ----------ISSTSDQSQSPCQYHVDELIRCAQSQSDISACSGFSEALKECSRQYGL 126
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. TrEMBL
Match: A0A095A7Q0 (Coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial OS=Schistosoma haematobium OX=6185 GN=MS3_10268 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.987e-16
Identity = 61/119 (51.26%), Postives = 73/119 (61.34%), Query Frame = 2 
Query:  128 NLPARPPPSNVTSY-QQPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGL 481
            NLPAR PPS V     QPRQPG+  QMA TA GVA+GS VGH V  AL+GG+ G+     Q           +  S   Q+PCQ +++ELIRC + +SD   C GFSEALKEC R YGL
Sbjct:   54 NLPARAPPSAVAQPPAQPRQPGLMGQMAATAGGVAIGSVVGHAVTGALSGGLGGNPAQPAQ----------ISSTSDQSQSPCQYHVDELIRCAQSQSDISACSGFSEALKECSRQYGL 162
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. TrEMBL
Match: A0A4S2MMS0 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_000154 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.591e-13
Identity = 56/120 (46.67%), Postives = 71/120 (59.17%), Query Frame = 2 
Query:  128 NLPARPPPSNVT--SYQQPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGL 481
            NLPARP P+ ++     QP+QPG+  QM    A  A G AVGH VG+A+TG  SG      Q       + S      +QQNPCQ  I+ELIRCT+ + D  +C GFS+ALKEC R YG+
Sbjct:   15 NLPARPAPAALSHPPPTQPKQPGLMGQM----AATAGGVAVGHVVGSAVTGAFSGSGSQPEQVQSSESARIS------SQQNPCQYQIDELIRCTQTQRDITLCTGFSDALKECSRTYGV 124
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. TrEMBL
Match: G4VB03 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 GN=Smp_007300 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.632e-13
Identity = 61/119 (51.26%), Postives = 72/119 (60.50%), Query Frame = 2 
Query:  128 NLPARPPPSNVTSY-QQPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGL 481
            +LPAR PPS V     QPRQPG+  QMA TA GVA+GS VGH +  AL+   SG   N  Q V+ S     Y       Q+PCQ  ++ELIRC + +SD   C GFSEALKEC R YGL
Sbjct:   18 SLPARAPPSAVAQPPAQPRQPGLMGQMAATAGGVAIGSVVGHAITGALS---SGAGSNPAQPVQTSPPSDQY-------QSPCQYQVDELIRCAQSQSDISACSGFSEALKECSRQYGL 126
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Cavefish
Match: chchd10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:NCBI gene;Acc:103024891])

HSP 1 Score: 48.521 bits (114), Expect = 7.696e-7
Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 2 
Query:  173 QPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            QP+QPG+ AQMATTAAGVAVGSAVGH VG ALTG  SG + +     +    Q +    + +Q  PC   + + + C   ++D  +C GF+EALK+CK  +G+S
Sbjct:   38 QPKQPGLMAQMATTAAGVAVGSAVGHVVGGALTGAFSGGSSSSEAPKQAPAYQEAPR-AAPSQAGPCLFEVRQFLDCATNQTDLSLCEGFNEALKQCKYSHGVS 140
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Cavefish
Match: chchd2 (coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:103041679])

HSP 1 Score: 46.9802 bits (110), Expect = 4.121e-6
Identity = 19/42 (45.24%), Postives = 27/42 (64.29%), Query Frame = 2 
Query:  359 QQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
             QNPC   +++ I C + +SD  +C GFSE LK+CK   G+S
Sbjct:  128 HQNPCSYELKQFIECAQTQSDLKLCEGFSEVLKQCKFSNGMS 169
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Cavefish
Match: chchd2 (coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:103041679])

HSP 1 Score: 46.9802 bits (110), Expect = 4.241e-6
Identity = 19/42 (45.24%), Postives = 27/42 (64.29%), Query Frame = 2 
Query:  359 QQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
             QNPC   +++ I C + +SD  +C GFSE LK+CK   G+S
Sbjct:  139 HQNPCSYELKQFIECAQTQSDLKLCEGFSEVLKQCKFSNGMS 180
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Cavefish
Match: chchd10 (coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:NCBI gene;Acc:103024891])

HSP 1 Score: 46.2098 bits (108), Expect = 5.223e-6
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 2 
Query:  173 QPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYG 478
            QP+QPG+ AQMATTAAGVAVGSAVGH VG ALTG  SG + +     +    Q +    + +Q  PC   + + + C   ++D  +C GF+EALK+CK  +G
Sbjct:   38 QPKQPGLMAQMATTAAGVAVGSAVGHVVGGALTGAFSGGSSSSEAPKQAPAYQEAPR-AAPSQAGPCLFEVRQFLDCATNQTDLSLCEGFNEALKQCKYSHG 138
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Cavefish
Match: chchd2 (coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:103041679])

HSP 1 Score: 45.8246 bits (107), Expect = 9.115e-6
Identity = 17/36 (47.22%), Postives = 24/36 (66.67%), Query Frame = 2 
Query:  359 QQNPCQSNIEELIRCTERESDFGMCMGFSEALKECK 466
             QNPC   +++ I C + +SD  +C GFSE LK+CK
Sbjct:  115 HQNPCSYELKQFIECAQTQSDLKLCEGFSEVLKQCK 150
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Nematostella
Match: EDO29679 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T2Y7])

HSP 1 Score: 45.8246 bits (107), Expect = 5.039e-6
Identity = 16/36 (44.44%), Postives = 25/36 (69.44%), Query Frame = 2 
Query:  365 NPCQSNIEELIRCTERESDFGMCMGFSEALKECKRF 472
            NPCQ  +++ + C +  SD  MC GF+EAL++CK +
Sbjct:  113 NPCQYELQQFVECAQNNSDMNMCQGFNEALRQCKLY 148
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Medaka
Match: chchd2 (coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:101167972])

HSP 1 Score: 53.9138 bits (128), Expect = 1.557e-8
Identity = 59/124 (47.58%), Postives = 72/124 (58.06%), Query Frame = 2 
Query:  131 LPARPPPSNVTS-YQQPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHN------DNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGL 481
            +P + PPS V +    PRQPGMFAQMATTAAGVAVGSAVGHT+G ALTGG  G        D   Q+  Q   Q  Y      QQ  C   +++ I C + +SD  +C GF E LK+C+   GL
Sbjct:   38 VPMQAPPSAVGAPAAAPRQPGMFAQMATTAAGVAVGSAVGHTIGHALTGGFGGGQSEPAKPDITYQEQHQQQPQSFYQQEQQQQQQVCSYELKQFIECAQNQSDLKLCEGFGEVLKQCRFANGL 161
[Close]
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Planmine SMEST
Match: SMESG000003969.1 (SMESG000003969.1)

HSP 1 Score: 175.252 bits (443), Expect = 6.547e-55
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 2 
Query:  128 NLPARPPPSNVTSYQQPRQPGMFAQMXXXXXXXXXXXXXXXXXXXXLTGGMSGHNDNXXXXXXXXXXXXXYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 484
            NLPARPPPSNVTSYQQPRQPGMFAQMATTAAGVAVGSAVGHTVGAALTGGMSGHNDNQPQQVEQSVQQPSYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS
Sbjct:   20 NLPARPPPSNVTSYQQPRQPGMFAQMATTAAGVAVGSAVGHTVGAALTGGMSGHNDNQPQQVEQSVQQPSYNYNSVNQQNPCQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS 138
The following BLAST results are available for this feature:
BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CHCHD108.250e-950.50coiled-coil-helix-coiled-coil-helix domain contain... [more]
CHCHD108.250e-950.50coiled-coil-helix-coiled-coil-helix domain contain... [more]
CHCHD102.353e-847.17coiled-coil-helix-coiled-coil-helix domain contain... [more]
CHCHD102.353e-847.17coiled-coil-helix-coiled-coil-helix domain contain... [more]
CHCHD21.322e-646.30coiled-coil-helix-coiled-coil-helix domain contain... [more]
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
chchd108.169e-641.90coiled-coil-helix-coiled-coil-helix domain contain... [more]
chchd108.169e-641.90coiled-coil-helix-coiled-coil-helix domain contain... [more]
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
gpat31.649e-747.62glycerol-3-phosphate acyltransferase 3 [Source:NCB... [more]
luc7l38.347e-644.07LUC7-like 3 pre-mRNA splicing factor [Source:Xenba... [more]
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Chchd101.364e-848.51coiled-coil-helix-coiled-coil-helix domain contain... [more]
Chchd101.364e-848.51coiled-coil-helix-coiled-coil-helix domain contain... [more]
Chchd22.581e-747.12coiled-coil-helix-coiled-coil-helix domain contain... [more]
Zbed52.300e-647.47zinc finger, BED type containing 5 [Source:MGI Sym... [more]
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q8WYQ3|CHC10_HUMAN3.962e-850.50Coiled-coil-helix-coiled-coil-helix domain-contain... [more]
sp|Q9D1L0|CHCH2_MOUSE1.805e-647.12Coiled-coil-helix-coiled-coil-helix domain-contain... [more]
sp|Q9Y6H1|CHCH2_HUMAN6.350e-646.30Coiled-coil-helix-coiled-coil-helix domain-contain... [more]
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183MGX51.711e-1651.26Uncharacterized protein OS=Schistosoma margrebowie... [more]
A0A183NV942.083e-1651.26Uncharacterized protein OS=Schistosoma mattheei OX... [more]
A0A095A7Q04.987e-1651.26Coiled-coil-helix-coiled-coil-helix domain-contain... [more]
A0A4S2MMS02.591e-1346.67Uncharacterized protein OS=Opisthorchis felineus O... [more]
G4VB032.632e-1351.26Uncharacterized protein OS=Schistosoma mansoni OX=... [more]
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
chchd107.696e-746.15coiled-coil-helix-coiled-coil-helix domain contain... [more]
chchd24.121e-645.24coiled-coil-helix-coiled-coil-helix domain contain... [more]
chchd24.241e-645.24coiled-coil-helix-coiled-coil-helix domain contain... [more]
chchd105.223e-646.08coiled-coil-helix-coiled-coil-helix domain contain... [more]
chchd29.115e-647.22coiled-coil-helix-coiled-coil-helix domain contain... [more]
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO296795.039e-644.44Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
chchd21.557e-847.58coiled-coil-helix-coiled-coil-helix domain contain... [more]
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BLAST of Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000003969.16.547e-55100.00SMESG000003969.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30031407 ID=SMED30031407|Name=Coiled-coil-helix-coiled-coil-helix domain-containing protein 10 mitochondrial|organism=Schmidtea mediterranea sexual|type=transcript|length=910bp
ATCTCTTGTTTAAACTATTTTATTTTATTACTTCTTTTAATTGTTAATTT
AAGTAAATAAAGAAATTTCTATGCCTCGTCGCAGAAGTAGTCCATCGCCT
ATGAGAGGGAGTTCTCCAACGAGGAGTAATTTGCCCGCACGCCCACCTCC
ATCAAATGTCACTTCTTACCAACAACCAAGACAACCAGGAATGTTTGCGC
AAATGGCAACAACTGCCGCAGGTGTTGCAGTTGGATCAGCTGTAGGTCAT
ACTGTAGGCGCAGCTTTAACAGGAGGAATGTCGGGACATAACGATAACCA
ACCTCAACAAGTGGAACAATCAGTTCAGCAACCATCGTATAATTATAATT
CTGTAAATCAACAAAATCCTTGTCAAAGTAACATTGAAGAATTAATTCGA
TGTACCGAACGAGAAAGTGATTTTGGAATGTGTATGGGTTTTAGTGAGGC
ACTAAAAGAATGCAAAAGATTTTACGGATTATCTTAAATAATGCAGAATT
AAAATAGGACCGATAGATTAACATTGATGATGTAATATCTAGTATGCTAG
TTTTGTTTAATCAAAAAGTTCATTTTCACATTTCTTTTAAACTTGATGTG
TTGATTCTGCCAGAACTATGACTGAAATTTAGTCTTTCGGTAGAAGAGAT
TCATTTAAATATTTTAAAATATAAATTAAAACATAAATGTATAACCCAGA
ATTTAAATGATGTATCGGAGGTATCGCATTAACATGCATGGGAAACAATT
GTCATTTAGATAAATTAGTTCAAAATTATCTTATTATTAACTTTTATTGA
GTGAAAATTACTCACAAGCTAGTTTGATATTGTTTATTTAGAAAATGTAT
TTTTCTAACGAATTTATTATTAATTGGTCTTTTGTTAGCATATTATGCAT
TGAATAATTT
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protein sequence of SMED30031407-orf-1

>SMED30031407-orf-1 ID=SMED30031407-orf-1|Name=SMED30031407-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=139bp
MPRRRSSPSPMRGSSPTRSNLPARPPPSNVTSYQQPRQPGMFAQMATTAA
GVAVGSAVGHTVGAALTGGMSGHNDNQPQQVEQSVQQPSYNYNSVNQQNP
CQSNIEELIRCTERESDFGMCMGFSEALKECKRFYGLS*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000026gut
PLANA:0000034epidermis
PLANA:0000429neoblast
PLANA:0002032epidermal cell
Vocabulary: cellular component
TermDefinition
GO:0005739mitochondrion
GO:0005758mitochondrial intermembrane space
GO:0005634nucleus
Vocabulary: biological process
TermDefinition
GO:0006119oxidative phosphorylation
GO:0006754ATP biosynthetic process
GO:0007005mitochondrion organization
GO:2000984negative regulation of ATP citrate synthase activity
Vocabulary: molecular function
TermDefinition
GO:0003674molecular_function
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..85
NoneNo IPR availablePANTHERPTHR13523:SF4COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN-CONTAINING PROTEIN 10, MITOCHONDRIALcoord: 1..133
NoneNo IPR availablePANTHERPTHR13523COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77coord: 1..133
NoneNo IPR availablePROSITEPS51808CHCHcoord: 98..138
score: 10.737