Pogo transposable element with ZNF domain

Overview


Name	Pogo transposable element with ZNF domain
Smed ID	SMED30031380
Length (bp)	2350

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Pogo transposable element with ZNF domain (SMED30031380) t-SNE clustered cells

Violin plots show distribution of expression levels for Pogo transposable element with ZNF domain (SMED30031380) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Pogo transposable element with ZNF domain (SMED30031380) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Pogo transposable element with ZNF domain (SMED30031380) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30031380

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 10

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
X1 cell	SMED30031380	h1SMcG0019752	SmedASXL_024240	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X1 cell	SMED30031380	h1SMcG0019752	SmedASXL_019067	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X2 cell	SMED30031380	h1SMcG0019752	SmedASXL_019067	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
neoblast	SMED30031380	h1SMcG0019752	MF411143	smed_ncbi_20240424	PMID:29557542 Han et al., 2019
neoblast	SMED30031380	h1SMcG0019752	MF411143	smed_ncbi_20240424	PMID:29557542 Han et al., 2019
neoblast	SMED30031380	h1SMcG0019752	MF411143	smed_ncbi_20240424	PMID:29557542 Han et al., 2019
nervous system	SMED30031380	h1SMcG0019752	dd_Smed_v4_2118_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30031380	h1SMcG0019752	dd_Smed_v4_2118_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30031380	h1SMcG0019752	dd_Smed_v4_2118_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
zeta neoblast	SMED30031380	h1SMcG0019752	dd_Smed_v4_2118_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Pogo transposable element with ZNF domain vs. Ensembl Human
Match: POGZ (pogo transposable element derived with ZNF domain [Source:HGNC Symbol;Acc:HGNC:18801])

HSP 1 Score: 124.79 bits (312), Expect = 1.859e-28
Identity = 86/313 (27.48%), Postives = 131/313 (41.85%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLM--------------CIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +  P     P   +  AP  S +  L   ++P    S+               C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  550 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDTP-----PSALQEAAPLTSSMDPLPVFLYPPVQRSIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFVTSVGDAMAKHLV 826

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Human
Match: POGZ (pogo transposable element derived with ZNF domain [Source:HGNC Symbol;Acc:HGNC:18801])

HSP 1 Score: 124.79 bits (312), Expect = 1.982e-28
Identity = 86/313 (27.48%), Postives = 131/313 (41.85%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLM--------------CIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +  P     P   +  AP  S +  L   ++P    S+               C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  559 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDTP-----PSALQEAAPLTSSMDPLPVFLYPPVQRSIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFVTSVGDAMAKHLV 835

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Human
Match: POGZ (pogo transposable element derived with ZNF domain [Source:HGNC Symbol;Acc:HGNC:18801])

HSP 1 Score: 124.405 bits (311), Expect = 2.179e-28
Identity = 86/313 (27.48%), Postives = 131/313 (41.85%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLM--------------CIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +  P     P   +  AP  S +  L   ++P    S+               C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  497 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDTP-----PSALQEAAPLTSSMDPLPVFLYPPVQRSIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFVTSVGDAMAKHLV 773

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Human
Match: POGZ (pogo transposable element derived with ZNF domain [Source:HGNC Symbol;Acc:HGNC:18801])

HSP 1 Score: 124.405 bits (311), Expect = 2.207e-28
Identity = 86/313 (27.48%), Postives = 131/313 (41.85%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLM--------------CIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +  P     P   +  AP  S +  L   ++P    S+               C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  506 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDTP-----PSALQEAAPLTSSMDPLPVFLYPPVQRSIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFVTSVGDAMAKHLV 782

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Human
Match: POGZ (pogo transposable element derived with ZNF domain [Source:HGNC Symbol;Acc:HGNC:18801])

HSP 1 Score: 124.02 bits (310), Expect = 3.337e-28
Identity = 84/313 (26.84%), Postives = 131/313 (41.85%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLM--------------CIECGESLS--LDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +  P     P   +  AP  S +  L   ++P    S+               C+EC   +    +    Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  464 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDTP-----PSALQEAAPLTSSMDPLPVFLYPPVQRSIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFVTSVGDAMAKHLV 740

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Celegans
Match: row-1 (Relative of Woc homolog [Source:UniProtKB/TrEMBL;Acc:A5JYT9])

HSP 1 Score: 53.5286 bits (127), Expect = 4.468e-7
Identity = 40/131 (30.53%), Postives = 59/131 (45.04%), Query Frame = 2

Query:  905 SCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHC-DTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDH 1294
            +C ICE    ++ AL  H++  H   E PY C  C + TS+      HF + H  D+  L+CP CL   +      + PN   S    V +   F+ H+++H       C  C L F ++   E HR  DH
Sbjct:  274 TCNICELDFGNSIALNTHMK-KHISGEAPYNCQKCKYRTSVRAFFYQHFIEKHSNDSRTLLCPICLHHED------LRPNVRRSKHIFVRE---FVNHMRSHALGPQMRCHVCALTFTSRLLLEAHRTNDH 394

[Close]

Query:  905 SCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHC-DTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDH 1294
            +C ICE    ++ AL  H++  H   E PY C  C + TS+      HF + H  D+  L+CP CL   +      + PN   S    V +   F+ H+++H       C  C L F ++   E HR  DH
Sbjct:  274 TCNICELDFGNSIALNTHMK-KHISGEAPYNCQKCKYRTSVRAFFYQHFIEKHSNDSRTLLCPICLHHED------LRPNVRRSKHIFVRE---FVNHMRSHALGPQMRCHVCALTFTSRLLLEAHRTNDH 394

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Celegans
Match: row-1 (Relative of Woc homolog [Source:UniProtKB/TrEMBL;Acc:A5JYT9])

HSP 1 Score: 51.2174 bits (121), Expect = 2.303e-6
Identity = 39/130 (30.00%), Postives = 58/130 (44.62%), Query Frame = 2

Query:  905 SCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDH 1294
            +C ICE    ++ AL  H++  H   E PY C  C + TS+      HF + H +   L+CP CL   +      + PN   S    V +   F+ H+++H       C  C L F ++   E HR  DH
Sbjct:  274 TCNICELDFGNSIALNTHMK-KHISGEAPYNCQKCKYRTSVRAFFYQHFIEKHSNET-LLCPICLHHED------LRPNVRRSKHIFVRE---FVNHMRSHALGPQMRCHVCALTFTSRLLLEAHRTNDH 392

[Close]

Query:  905 SCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDH 1294
            +C ICE    ++ AL  H++  H   E PY C  C + TS+      HF + H +   L+CP CL   +      + PN   S    V +   F+ H+++H       C  C L F ++   E HR  DH
Sbjct:  274 TCNICELDFGNSIALNTHMK-KHISGEAPYNCQKCKYRTSVRAFFYQHFIEKHSNET-LLCPICLHHED------LRPNVRRSKHIFVRE---FVNHMRSHALGPQMRCHVCALTFTSRLLLEAHRTNDH 392

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Celegans
Match: row-1 (Relative of Woc homolog [Source:UniProtKB/TrEMBL;Acc:A5JYT9])

HSP 1 Score: 51.2174 bits (121), Expect = 2.422e-6
Identity = 39/130 (30.00%), Postives = 58/130 (44.62%), Query Frame = 2

Query:  905 SCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDH 1294
            +C ICE    ++ AL  H++  H   E PY C  C + TS+      HF + H +   L+CP CL   +      + PN   S    V +   F+ H+++H       C  C L F ++   E HR  DH
Sbjct:  273 TCNICELDFGNSIALNTHMK-KHISGEAPYNCQKCKYRTSVRAFFYQHFIEKHSNET-LLCPICLHHED------LRPNVRRSKHIFVRE---FVNHMRSHALGPQMRCHVCALTFTSRLLLEAHRTNDH 391

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Fly
Match: row (gene:FBgn0033998 transcript:FBtr0329939)

HSP 1 Score: 85.8853 bits (211), Expect = 8.870e-17
Identity = 89/347 (25.65%), Postives = 136/347 (39.19%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSL--FLQHLKTH---KDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQ--HKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHET-MIGIEDTELESDGNKNMIME 1924
            C IC++  +S   L  HLQ  H   E+PY C  C + +S ++D++ HF   H   N L CPYCL IF              S +  V Q  +  +  HL  H   +D   + C  C+L+F+ K D + H  + H   + KT                    N P+      ++   P   R +  E          VF   L+   C EC    + ++  +  +L C  C + +CC  A  RH +  + N   VD   V +             ++ +C  C     +GN +  HL   CG+        P L AA E A K +   M+G+   + E+ G    I E
Sbjct:  812 CLICQQRHNSLHLLTAHLQKVHSTLELPYWCHSCGYRSSSHRDLVRHFYDDHKHQNFLQCPYCLDIFYF------------SKLGVVNQLRIEHYFMHLDEHINKRDPSLR-CQKCSLSFLEKGDLKQH-AVQHHVSMTKT--------------------NRPVRLLLNNSMLIPPPKIRTHHREQPPFSTYKRPVFFAFLEGKTCAECNTDFASEETHYTGWLHCVKCNYQTCCERAQFRHGVECNGNF--VDAMEVNM------------PQEMHCI-CGFATGNGNKMAQHLA-NCGLSTCY----PSLEAASENAVKRNMLDMLGLVRRDGETSGEGADISE 1104

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Fly
Match: row (gene:FBgn0033998 transcript:FBtr0087402)

HSP 1 Score: 85.8853 bits (211), Expect = 9.204e-17
Identity = 89/347 (25.65%), Postives = 136/347 (39.19%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSL--FLQHLKTH---KDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQ--HKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHET-MIGIEDTELESDGNKNMIME 1924
            C IC++  +S   L  HLQ  H   E+PY C  C + +S ++D++ HF   H   N L CPYCL IF              S +  V Q  +  +  HL  H   +D   + C  C+L+F+ K D + H  + H   + KT                    N P+      ++   P   R +  E          VF   L+   C EC    + ++  +  +L C  C + +CC  A  RH +  + N   VD   V +             ++ +C  C     +GN +  HL   CG+        P L AA E A K +   M+G+   + E+ G    I E
Sbjct:  812 CLICQQRHNSLHLLTAHLQKVHSTLELPYWCHSCGYRSSSHRDLVRHFYDDHKHQNFLQCPYCLDIFYF------------SKLGVVNQLRIEHYFMHLDEHINKRDPSLR-CQKCSLSFLEKGDLKQH-AVQHHVSMTKT--------------------NRPVRLLLNNSMLIPPPKIRTHHREQPPFSTYKRPVFFAFLEGKTCAECNTDFASEETHYTGWLHCVKCNYQTCCERAQFRHGVECNGNF--VDAMEVNM------------PQEMHCI-CGFATGNGNKMAQHLA-NCGLSTCY----PSLEAASENAVKRNMLDMLGLVRRDGETSGEGADISE 1104

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Zebrafish
Match: pogzb (pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3])

HSP 1 Score: 108.612 bits (270), Expect = 1.565e-23
Identity = 77/325 (23.69%), Postives = 132/325 (40.62%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTD-----------FELHRRLD--HKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLV--FPEELDSL---MCIECGESLS--LDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVE 1780
            ++++ + +I  +  C+ICE + ++      H++NSH+  EMPY C +C + +S Y DV  HF+  H DT  L+C YCL++F                      ++ + QH   H+     HC  C L F+   D           F   R LD       V   +Y   K+   +   AS    +    S      S  Q          +V  +   +  F E+   L    C+EC   +   ++ +  Y+ CS+C +++CC+ A+  H++ NH        S+       K   + V+     C  C  +   GN +  HL++
Sbjct:  477 HLESVHTSIESSTKCKICEWSFENEPVFLQHMKNSHKPGEMPYVCQVCEYRSSFYSDVFNHFRTWHEDTRHLLCQYCLKVFK--------------------HSTSYQQHYVRHQKSTVYHCNKCRLQFLFTKDKVEHKINHHRTFRKPRELDGLQPGTKVTIRAYVGKKTPGQSASKASTNIQKNSISSSQSTTLSGDQQSEQQQSGKKQVSKMFQFLSKFQEQRAQLGRHKCVECTFDIPDFVNHYPTYVHCSLCFYSTCCSRAYANHMINNHVPGRAPKPSK-------KGPPSVVK---LTCAGCEYSTPHGNLMAKHLIK 771

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Zebrafish
Match: pogzb (pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3])

HSP 1 Score: 108.227 bits (269), Expect = 1.765e-23
Identity = 77/325 (23.69%), Postives = 132/325 (40.62%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTD-----------FELHRRLD--HKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLV--FPEELDSL---MCIECGESLS--LDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVE 1780
            ++++ + +I  +  C+ICE + ++      H++NSH+  EMPY C +C + +S Y DV  HF+  H DT  L+C YCL++F                      ++ + QH   H+     HC  C L F+   D           F   R LD       V   +Y   K+   +   AS    +    S      S  Q          +V  +   +  F E+   L    C+EC   +   ++ +  Y+ CS+C +++CC+ A+  H++ NH        S+       K   + V+     C  C  +   GN +  HL++
Sbjct:  477 HLESVHTSIESSTKCKICEWSFENEPVFLQHMKNSHKPGEMPYVCQVCEYRSSFYSDVFNHFRTWHEDTRHLLCQYCLKVFK--------------------HSTSYQQHYVRHQKSTVYHCNKCRLQFLFTKDKVEHKINHHRTFRKPRELDGLQPGTKVTIRAYVGKKTPGQSASKASTNIQKNSISSSQSTTLSGDQQSEQQQSGKKQVSKMFQFLSKFQEQRAQLGRHKCVECTFDIPDFVNHYPTYVHCSLCFYSTCCSRAYANHMINNHVPGRAPKPSK-------KGPPSVVK---LTCAGCEYSTPHGNLMAKHLIK 771

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Zebrafish
Match: znf280d (zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260])

HSP 1 Score: 106.301 bits (264), Expect = 4.148e-23
Identity = 87/348 (25.00%), Postives = 152/348 (43.68%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFIN---KTDFELH--------RRLDHKSQVVKTESYPDYKSSFLAIESAS---------ETRNEPIEDSP---LPNVFSAPQIKRMNAPEPSRV---KDLSNLVFPEELDSLMCIECGESLSLDQHKRY---LPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCA-ITNLDG-NALTSHLVEECG-VCMVTLRP 1813
            +I++ +     + +C+ICE   ++   L  H++++H+  EMPY C +CN+ +S + DV  HF+  H +T +L+CP+CL++                         +++QH   H+    + C  C LNF+    K + ++H        R L+      K         + ++ ES+S         E+  +P   SP    PNV    + K  N    +R     +L  L  P+  +   C+EC   + +D +  Y   L C+ C++ S C  AF +H++R H N  +V   +V      K     VR+    C KC  + +  G + +T HL+      C V + P
Sbjct:  367 HIESAHSPFESSTNCKICELAFETEQVLLEHMRDNHKPGEMPYGCQVCNYRSSFFCDVDNHFRTVHENTKDLLCPFCLKVLR--------------------SGHMYMQHYMRHQKKGIQRCGKCRLNFLTYKEKVEHKIHFHRTYRKPRNLEGLPPGTKVTIRASISGAPMSTESSSKSYIIPTSPESTKQPFRTSPNSTKPNVNGG-KAKTANQFNWNRCLYNTELKRLKLPKGDNK--CMECLHDV-VDPYIHYPLSLKCNKCKYRSSCQKAFRQHMIRFHQNSTKVRVGKV------KNPPRGVRSLTLVCLKCDFLADASGADKMTEHLLSRSNHSCQVIMEP 684

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Zebrafish
Match: znf280d (zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260])

HSP 1 Score: 106.301 bits (264), Expect = 4.263e-23
Identity = 87/348 (25.00%), Postives = 152/348 (43.68%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFIN---KTDFELH--------RRLDHKSQVVKTESYPDYKSSFLAIESAS---------ETRNEPIEDSP---LPNVFSAPQIKRMNAPEPSRV---KDLSNLVFPEELDSLMCIECGESLSLDQHKRY---LPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCA-ITNLDG-NALTSHLVEECG-VCMVTLRP 1813
            +I++ +     + +C+ICE   ++   L  H++++H+  EMPY C +CN+ +S + DV  HF+  H +T +L+CP+CL++                         +++QH   H+    + C  C LNF+    K + ++H        R L+      K         + ++ ES+S         E+  +P   SP    PNV    + K  N    +R     +L  L  P+  +   C+EC   + +D +  Y   L C+ C++ S C  AF +H++R H N  +V   +V      K     VR+    C KC  + +  G + +T HL+      C V + P
Sbjct:  368 HIESAHSPFESSTNCKICELAFETEQVLLEHMRDNHKPGEMPYGCQVCNYRSSFFCDVDNHFRTVHENTKDLLCPFCLKVLR--------------------SGHMYMQHYMRHQKKGIQRCGKCRLNFLTYKEKVEHKIHFHRTYRKPRNLEGLPPGTKVTIRASISGAPMSTESSSKSYIIPTSPESTKQPFRTSPNSTKPNVNGG-KAKTANQFNWNRCLYNTELKRLKLPKGDNK--CMECLHDV-VDPYIHYPLSLKCNKCKYRSSCQKAFRQHMIRFHQNSTKVRVGKV------KNPPRGVRSLTLVCLKCDFLADASGADKMTEHLLSRSNHSCQVIMEP 685

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Zebrafish
Match: znf280d (zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260])

HSP 1 Score: 106.301 bits (264), Expect = 4.304e-23
Identity = 87/348 (25.00%), Postives = 152/348 (43.68%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFIN---KTDFELH--------RRLDHKSQVVKTESYPDYKSSFLAIESAS---------ETRNEPIEDSP---LPNVFSAPQIKRMNAPEPSRV---KDLSNLVFPEELDSLMCIECGESLSLDQHKRY---LPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCA-ITNLDG-NALTSHLVEECG-VCMVTLRP 1813
            +I++ +     + +C+ICE   ++   L  H++++H+  EMPY C +CN+ +S + DV  HF+  H +T +L+CP+CL++                         +++QH   H+    + C  C LNF+    K + ++H        R L+      K         + ++ ES+S         E+  +P   SP    PNV    + K  N    +R     +L  L  P+  +   C+EC   + +D +  Y   L C+ C++ S C  AF +H++R H N  +V   +V      K     VR+    C KC  + +  G + +T HL+      C V + P
Sbjct:  404 HIESAHSPFESSTNCKICELAFETEQVLLEHMRDNHKPGEMPYGCQVCNYRSSFFCDVDNHFRTVHENTKDLLCPFCLKVLR--------------------SGHMYMQHYMRHQKKGIQRCGKCRLNFLTYKEKVEHKIHFHRTYRKPRNLEGLPPGTKVTIRASISGAPMSTESSSKSYIIPTSPESTKQPFRTSPNSTKPNVNGG-KAKTANQFNWNRCLYNTELKRLKLPKGDNK--CMECLHDV-VDPYIHYPLSLKCNKCKYRSSCQKAFRQHMIRFHQNSTKVRVGKV------KNPPRGVRSLTLVCLKCDFLADASGADKMTEHLLSRSNHSCQVIMEP 721

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Xenopus
Match: ENSXETT00000010804.1 (zinc finger protein 280D [Source:NCBI gene;Acc:100144635])

HSP 1 Score: 79.7221 bits (195), Expect = 1.150e-14
Identity = 72/289 (24.91%), Postives = 119/289 (41.18%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDY----------------------------------KSSFLAIESASETRNEPIEDSPL--PNV------FSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLM----CIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNH 1630
            C+ICE + +S   L  H++++H+  EMPY C +C + +S Y +V  HF+ AH +T  L+CP+CL++  I    P                  ++QH   H++     C  C L F+         ++DHK+Q  +T   P                                     S+ L   S S+  N  I   PL   NV         P+ K ++     R+K ++  +    L S+     CIEC  E    + H   ++ C+ C+F++ C  A+  H++R H
Sbjct:  290 CKICELSFESEQILLQHMKDNHKPGEMPYVCQVCGYRSSAYAEVDSHFRFAHENTKSLLCPFCLKV--IKSGTP------------------YMQHYMKHQNKGVYRCANCRLQFLT-----CKEKMDHKTQHHRTFRKPKQLEGLPPGTKVTIRASVGSIVNSVHSPTNTACTSPPSTALQASSISKITNAKITQGPLVKSNVQNTKPKIPPPKKKPVSTTSKKRIKMINTAL--RNLRSVAGYHKCIECQLEVKDFEGHFHTHVHCTKCKFSTSCNKAYTNHMIRFH 551

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Xenopus
Match: ENSXETT00000010751.1 (zinc finger protein 280D [Source:NCBI gene;Acc:100144635])

HSP 1 Score: 78.5666 bits (192), Expect = 2.627e-14
Identity = 42/140 (30.00%), Postives = 70/140 (50.00%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYP 1327
            C+ICE + +S   L  H++++H+  EMPY C +C + +S Y +V  HF+ AH +T  L+CP+CL++  I    P                  ++QH   H++     C  C L F+   +     ++DHK+Q  +T   P
Sbjct:  337 CKICELSFESEQILLQHMKDNHKPGEMPYVCQVCGYRSSAYAEVDSHFRFAHENTKSLLCPFCLKV--IKSGTP------------------YMQHYMKHQNKGVYRCANCRLQFLTCKE-----KMDHKTQHHRTFRKP 451

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Xenopus
Match: celf3 (CUGBP, Elav-like family member 3 [Source:Xenbase;Acc:XB-GENE-5796618])

HSP 1 Score: 65.855 bits (159), Expect = 2.613e-10
Identity = 85/378 (22.49%), Postives = 134/378 (35.45%), Query Frame = 2

Query:  863 VYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIE--------SASETRNEPIED---SPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLP----CSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV-----EECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIME 1924
            V +D  NG +    +C+ C +   + F L  HL+N H   E   +C IC +        + H K  H                        P E P +       SL        K +   HC  C L F+   D ++  +L H     K        P  K +  A          S+++T + P+ D     L +   + Q KR        + ++     P    S  C+EC  SL +   + + P    CS+CR+++CC+ A+  H++ NH  V       + L    K +S         C+ C      G+A+  HLV       C V    + P   LL     A K  E  +    T + + G    + E
Sbjct:  513 VELDQQNGEVDGHTTCQHCYRQFSTPFQLQCHLENVHSSYESTTKCKICEWAFDSEPLFLQHMKDTH-----------------------KPGEMPYVCQVRAVVSLLCPFPFPSKSVY--HCNKCRLQFLFAKD-KIEHKLQHHKTFRKPRQLEGLKPGTKVTIRASRAPSRSLPVSSADTTSMPLVDMDTDSLADSLYSMQYKRTVKKTSENLSNIHTKRPPYGRQS--CLEC--SLDITDFQNHFPTYVHCSLCRYSTCCSRAYANHMINNH--VPRKSPKYLALFKSCKPSS----VVALTCSSCPFVTRIGDAMAKHLVFNPAHSYCNV----IYPGWLLLCYYRMASKTQEDDVRSYRTAVATVGTSEKVSE 850

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Xenopus
Match: celf3 (CUGBP, Elav-like family member 3 [Source:Xenbase;Acc:XB-GENE-5796618])

HSP 1 Score: 62.7734 bits (151), Expect = 2.225e-9
Identity = 81/338 (23.96%), Postives = 132/338 (39.05%), Query Frame = 2

Query:  863 VYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRI-FNINDAIPMNPNEPPSIVTGVGQ-----TSLFLQH--LKTHKDL-LFK-----HCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIE--------SASETRNEPIED---SPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLP----CSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            V +D  NG +    +C+ C +   + F L  HL+N H   E   +C IC +        + H K  H    E+  PY  ++  + N      P    +I+ G        T  FL    L+  +D  L +     HC  C L F+   D ++  +L H     K        P  K +  A          S+++T + P+ D     L +   + Q KR        + ++     P    S  C+EC  SL +   + + P    CS+CR+++CC+ A+  H++ NH  V       + L    K +S         C+ C      G+A+  HLV
Sbjct:  513 VELDQQNGEVDGHTTCQHCYRQFSTPFQLQCHLENVHSSYESTTKCKICEWAFDSEPLFLQHMKDTH-KPGEM--PYVCQVRVSSNHIFFFLPTH--TIIGGDKDKLQACTCAFLSRGTLRALQDFNLLRQKSVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPRQLEGLKPGTKVTIRASRAPSRSLPVSSADTTSMPLVDMDTDSLADSLYSMQYKRTVKKTSENLSNIHTKRPPYGRQS--CLEC--SLDITDFQNHFPTYVHCSLCRYSTCCSRAYANHMINNH--VPRKSPKYLALFKSCKPSS----VVALTCSSCPFVTRIGDAMAKHLV 834

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Mouse
Match: Pogz (pogo transposable element with ZNF domain [Source:MGI Symbol;Acc:MGI:2442117])

HSP 1 Score: 121.324 bits (303), Expect = 1.356e-27
Identity = 87/316 (27.53%), Postives = 133/316 (42.09%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDS-----------------PLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +                 PLP VF  P ++R    +   V+ +S       +    C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  556 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDAPSGTLQEAAALTSTDPLP-VFLYPPVQRNI--QKRAVRKMS------VMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFATSVGDAMAKHLV 831

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Mouse
Match: Pogz (pogo transposable element with ZNF domain [Source:MGI Symbol;Acc:MGI:2442117])

HSP 1 Score: 121.324 bits (303), Expect = 1.538e-27
Identity = 87/316 (27.53%), Postives = 133/316 (42.09%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDS-----------------PLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +                 PLP VF  P ++R    +   V+ +S       +    C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  547 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDAPSGTLQEAAALTSTDPLP-VFLYPPVQRNI--QKRAVRKMS------VMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFATSVGDAMAKHLV 822

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Mouse
Match: Pogz (pogo transposable element with ZNF domain [Source:MGI Symbol;Acc:MGI:2442117])

HSP 1 Score: 120.939 bits (302), Expect = 1.690e-27
Identity = 87/316 (27.53%), Postives = 133/316 (42.09%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDS-----------------PLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +                 PLP VF  P ++R    +   V+ +S       +    C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  503 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDAPSGTLQEAAALTSTDPLP-VFLYPPVQRNI--QKRAVRKMS------VMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFATSVGDAMAKHLV 778

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Mouse
Match: Pogz (pogo transposable element with ZNF domain [Source:MGI Symbol;Acc:MGI:2442117])

HSP 1 Score: 120.553 bits (301), Expect = 2.284e-27
Identity = 87/316 (27.53%), Postives = 133/316 (42.09%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDS-----------------PLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +                 PLP VF  P ++R    +   V+ +S       +    C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  461 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDAPSGTLQEAAALTSTDPLP-VFLYPPVQRNI--QKRAVRKMS------VMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFATSVGDAMAKHLV 736

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Mouse
Match: Zfp280d (zinc finger protein 280D [Source:MGI Symbol;Acc:MGI:2384583])

HSP 1 Score: 83.5741 bits (205), Expect = 6.032e-16
Identity = 42/140 (30.00%), Postives = 71/140 (50.71%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYP 1327
            C+ICE + ++   L  H++++H+  EMPY C +CN+ +SL+ +V  HF+ +H +T  L+CP+CL++  I  A P                  ++ H   H+      CT C L F+         ++DHK+Q  +T   P
Sbjct:  377 CKICELSFETEQILLQHMKDNHKPGEMPYICQVCNYRSSLFSEVESHFRTSHENTKNLLCPFCLKVIKI--ATP------------------YMHHYMKHQKKGIHRCTKCRLQFLT-----CKEKMDHKTQHHRTFVKP 491

[Close]

BLAST of Pogo transposable element with ZNF domain vs. UniProt/SwissProt
Match: sp|Q7Z3K3|POGZ_HUMAN (Pogo transposable element with ZNF domain OS=Homo sapiens OX=9606 GN=POGZ PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 9.518e-28
Identity = 86/313 (27.48%), Postives = 131/313 (41.85%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLM--------------CIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +  P     P   +  AP  S +  L   ++P    S+               C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  559 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDTP-----PSALQEAAPLTSSMDPLPVFLYPPVQRSIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFVTSVGDAMAKHLV 835

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BLAST of Pogo transposable element with ZNF domain vs. UniProt/SwissProt
Match: sp|Q8BZH4|POGZ_MOUSE (Pogo transposable element with ZNF domain OS=Mus musculus OX=10090 GN=Pogz PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 9.486e-27
Identity = 87/316 (27.53%), Postives = 133/316 (42.09%), Query Frame = 2

Query:  899 TISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESY----PDYKSSFLAIESASETRNEPIEDS-----------------PLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLV 1777
            T  C+ICE   +S      H++++H+  EMPY C +C + +SLY +V  HF+  H DT  L+CPYCL++F   +A                    F QH   H+     HC  C L F+   D ++  +L H     K +      P  K +  A  S  + R  P+  +                 PLP VF  P ++R    +   V+ +S       +    C+EC  E      H   Y+ CS+CR+++CC+ A+  H++ NH   +     +   LF      N V      CT C      G+A+  HLV
Sbjct:  556 TTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNA--------------------FQQHYMRHQKRNVYHCNKCRLQFLFAKD-KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRA--SRGQPRTVPVSSNDAPSGTLQEAAALTSTDPLP-VFLYPPVQRNI--QKRAVRKMS------VMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRK---SPKYLALF-----KNSVSGIKLACTSCTFATSVGDAMAKHLV 831

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BLAST of Pogo transposable element with ZNF domain vs. UniProt/SwissProt
Match: sp|Q68FE8|Z280D_MOUSE (Zinc finger protein 280D OS=Mus musculus OX=10090 GN=Znf280d PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 4.468e-15
Identity = 42/140 (30.00%), Postives = 71/140 (50.71%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYP 1327
            C+ICE + ++   L  H++++H+  EMPY C +CN+ +SL+ +V  HF+ +H +T  L+CP+CL++  I  A P                  ++ H   H+      CT C L F+         ++DHK+Q  +T   P
Sbjct:  402 CKICELSFETEQILLQHMKDNHKPGEMPYICQVCNYRSSLFSEVESHFRTSHENTKNLLCPFCLKVIKI--ATP------------------YMHHYMKHQKKGIHRCTKCRLQFLT-----CKEKMDHKTQHHRTFVKP 516

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BLAST of Pogo transposable element with ZNF domain vs. UniProt/SwissProt
Match: sp|Q6N043|Z280D_HUMAN (Zinc finger protein 280D OS=Homo sapiens OX=9606 GN=ZNF280D PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 1.221e-14
Identity = 40/132 (30.30%), Postives = 67/132 (50.76%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQ 1303
            C+ICE + ++   L  H++++H+  EMPY C +CN+ +S + DV  HF+ +H +T  L+CP+CL++  I  A P                  ++ H   H+      CT C L F+         ++DHK+Q
Sbjct:  390 CKICELSFETEHVLLQHMKDNHKPGEMPYVCQVCNYRSSSFSDVETHFRTSHENTKNLLCPFCLKVIKI--ATP------------------YMHHYMKHQKKGIHRCTKCRLQFLT-----CKEKMDHKTQ 496

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BLAST of Pogo transposable element with ZNF domain vs. UniProt/SwissProt
Match: sp|Q6P3Y5|Z280C_MOUSE (Zinc finger protein 280C OS=Mus musculus OX=10090 GN=Znf280c PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.875e-13
Identity = 38/137 (27.74%), Postives = 69/137 (50.36%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTE 1318
            C+ICE + ++   L  H++++H+  EMPY C +C F +S++ DV  HF+ +H +T  L+CP+CL++  +  A P                  ++ H   H+      C  C L F+   +   H +L+H++ +   E
Sbjct:  392 CKICELSFETEHMLLQHMKDTHKPGEMPYICQVCQFRSSIFSDVETHFRSSHENTKNLLCPFCLKVSRM--ATP------------------YMNHYMRHQKKGIYRCPKCRLQFLTSKEKTEH-KLEHRTFIKPKE 507

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BLAST of Pogo transposable element with ZNF domain vs. TrEMBL
Match: A0A2Z3D3W2 (Factor for initiating regeneration 1 OS=Schmidtea mediterranea OX=79327 GN=Fir1 PE=2 SV=1)

HSP 1 Score: 1038.1 bits (2683), Expect = 0.000e+0
Identity = 499/500 (99.80%), Postives = 500/500 (100.00%), Query Frame = 2

Query:  824 EHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV 2323
            EHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSI+TGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV
Sbjct:  306 EHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIMTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV 805

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BLAST of Pogo transposable element with ZNF domain vs. TrEMBL
Match: A0A4Z2DHL6 (Pogo transposable element with ZNF domain OS=Schistosoma japonicum OX=6182 GN=EWB00_000890 PE=4 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.582e-63
Identity = 168/581 (28.92%), Postives = 268/581 (46.13%), Query Frame = 2

Query:  773 DKMNILISNFQN*LLYQEHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIP------MNPNEPPSIVT-GVGQTSLFLQHLKTHK-DLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLA--------IESASETRNEPIEDSPLPNVF--SAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHT-----------------------------NVE---EVDDSRVTLLFGLKTN----------------------SNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQA---------------EKEHETMIGIEDTEL----ESDGNKNMIMELENVTNIMDVIGGRPAQAIE---EQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADI 2233
            D  + LISN        +HM ++ P          N   +  T SCRIC K   SN  LA+HLQ++HR+ EMPY C +C F +S+Y+D++ HFKK H ++N L+C YCLRIF  +DA P      ++ +   S V  GVGQT ++LQHL+ H+     + C  C LNF NK+D+++HRRLDHK+        P  + S+ +        I +A +     ++ +   + F  + PQ+  MNAPE    K+L+  +FPE +++L C+ECG+ +   +H +YLPCSVCRFA+CC   F RH  + H                              NV+    +D+S  +     + N                       +++ +    C+ C  +NLDGN+L  HLVEECG    TL PDP LL ++                  +  +    G  D ++    ES  +   +  + +   IM  +      +++   E  ++         I++         + + D    + QQ I         +P+ + L+ G++LV++  EN   +  I+N AD+
Sbjct:  339 DSHDDLISNV-------DHMDILAP----------NLNGVSNTPSCRICGKVAASNLLLAHHLQSTHRQREMPYVCRLCLFRSSMYEDILDHFKKVHDNSNHLLCTYCLRIFTPSDARPNVQSVCLSASGGMSTVGLGVGQTQVYLQHLRMHQIKHQLRRCPTCRLNFTNKSDYQVHRRLDHKATRDVGTEQPGRQDSYESESYHTKKHIGNADQATEHSVDYNQSVDSFCINRPQVTSMNAPEAGCAKNLAIHLFPENIENLDCLECGKCMGDSEHAQYLPCSVCRFATCCRVGFQRHFQKAHLYSNASQSTDLDTGMPMVRQVFFDWCNNEDNVDCQNNIDESESSTFLNSQNNLIMNEFTDLTPINPNYSIVKYMESQIDSRHLCCSHCGASNLDGNSLARHLVEECGTLTATLNPDPLLLYSQTTTEQTQETEKHKQSHLNQNSNNIPFGSTDQKVVMISESSLSPTTVTSVPDSDVIMMNVDNDQLPSVQLDNESIEDQTNILNCSQITTQTSTNGTTTIDVTDAGGEVVQQFI---------LPDDLQLEEGQTLVMIQGENGQPQLAIVNQADL 893

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BLAST of Pogo transposable element with ZNF domain vs. TrEMBL
Match: A0A3P8I2T0 (C2H2-type domain-containing protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS12946 PE=4 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.139e-61
Identity = 111/250 (44.40%), Postives = 155/250 (62.00%), Query Frame = 2

Query:  902 ISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIP---MNPNEPPSIVTGVGQTSLFLQHLKTHK-DLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNV 1639
            +SCRIC K  +S  ALA+HLQ+SHR+ EMPY C +C F +SL++D++ HFKK H ++N L+C YCLRIF  +DA      +P    ++V GVGQT ++LQHL+ H+     + C  C LNF NK+D+++HRRLDHK+    T   P+ ++     E+  +T     E        + P I  MNAPE   V DL  L FP  +  + C+ECGE +  D H+RYLPCS+CRFA+CC+  ++RHV   H  V
Sbjct:   28 LSCRICGKETNSELALAHHLQSSHRQREMPYVCRLCLFRSSLFEDILDHFKKFHDNSNHLLCTYCLRIFTPSDARSPHYASPTGAATLVPGVGQTQVYLQHLRMHQVRHQLRRCPTCRLNFTNKSDYQVHRRLDHKAVRDGTSDRPE-EAGLDGYEATDQTVRRLKE--------TQPHITLMNAPEAGGVMDLVLLHFPPNIGEMRCLECGEPMDSDAHRRYLPCSLCRFATCCSAGYNRHVTHVHVYV 268

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BLAST of Pogo transposable element with ZNF domain vs. TrEMBL
Match: A0A183B161 (C2H2-type domain-containing protein OS=Echinostoma caproni OX=27848 PE=4 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.174e-61
Identity = 111/250 (44.40%), Postives = 155/250 (62.00%), Query Frame = 2

Query:  902 ISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIP---MNPNEPPSIVTGVGQTSLFLQHLKTHK-DLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNV 1639
            +SCRIC K  +S  ALA+HLQ+SHR+ EMPY C +C F +SL++D++ HFKK H ++N L+C YCLRIF  +DA      +P    ++V GVGQT ++LQHL+ H+     + C  C LNF NK+D+++HRRLDHK+    T   P+ ++     E+  +T     E        + P I  MNAPE   V DL  L FP  +  + C+ECGE +  D H+RYLPCS+CRFA+CC+  ++RHV   H  V
Sbjct:   28 LSCRICGKETNSELALAHHLQSSHRQREMPYVCRLCLFRSSLFEDILDHFKKFHDNSNHLLCTYCLRIFTPSDARSPHYASPTGAATLVPGVGQTQVYLQHLRMHQVRHQLRRCPTCRLNFTNKSDYQVHRRLDHKAVRDGTSDRPE-EAGLDGYEATDQTVRRLKE--------TQPHITLMNAPEAGGVMDLVLLHFPPNIGEMRCLECGEPMDSDAHRRYLPCSLCRFATCCSAGYNRHVTHVHVYV 268

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BLAST of Pogo transposable element with ZNF domain vs. TrEMBL
Match: A0A5K3FF07 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 6.315e-60
Identity = 177/577 (30.68%), Postives = 260/577 (45.06%), Query Frame = 2

Query:  893 ICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDA----IP-MNPNEPPSIVT------GVGQTSLFLQHLKTHK-DLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSS--------------------FLA--IESASETRNEPIEDSPL----------------PNVFSAP--------------QIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEE--VDDS-------RVTLLFGLKTNSNEVRAEDFYCTKCA-ITNLDGNA-------LTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELES---------------DGN---KNMIMELENVTNIM----DVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGN---------------------QGQMMIVDESESMDQQL-IDDPNTHTIS---IPEGINLKPGESLVLLICENNTEEFIIINTADINT 2239
            +   SCRIC K   S+ ALA+HLQ++HR+ EMPY C IC F +SLY+D++ HFKKAH  +N L+C YCLRIF  +DA    IP M+P      V+      GVGQT ++LQHL+ H+     + C  C LNF NK+D+++HRRLDHK+    + S                           F+   IE+A E   +P   SPL                P+   AP               +  +NAPEPSR KDLS    P E   L C+ECGESLS   HK+YLPCS C FA+CCA  F RHV R H       + DS       R      +  ++  V   +   ++ A I  +D +            L  E     VT  PD Q   AR++A++E    +  + + L                 DGN   +++I + E     +    +++  R     + + Q+ + AA   G+   +D G                      + Q+  + E+  +   + I DP    +    IPE ++L+PG++L+L+  E+   +  +IN AD + 
Sbjct:  266 VVGFSCRICGKEAASDLALAHHLQSTHRQREMPYVCRICLFRSSLYEDILDHFKKAHNGSNHLLCTYCLRIFTPSDARVPGIPLMSPGGGGGAVSTAGLGAGVGQTQVYLQHLRMHQVQHQLRRCPTCRLNFTNKSDYQVHRRLDHKACTSSSGSSAAAAEQQMKQQQEETAQEQPSQGVEEFMTNTIETAQEAEKQP---SPLVFQPQAEAKTTDQPQEPDATEAPATTAEDEEEEEEENHVILLNAPEPSRTKDLSETKLPPETAQLSCLECGESLSSVDHKQYLPCSACVFATCCAAGFARHVHRAHIYAPGSVLTDSHTGSPMIRPVAFEWMYNHATSVAPAEAQPSQAACIEPMDQSGPDGEQPVQAEALAVESTAAEVT--PDEQ--PARDEAKQEQTPTVPADTSGLGGVDGLFACPRCALSGVDGNTLARHLIEDCEADCATLQPDPEIVAARRQAEEQMRLQQEQEAAYGAGVVQGDDAGQVVYQLQPGPDEAASDVLHAPEEQQVAALGEAGGLPATIDITDPAGEVVQRLVIPEDLHLEPGQTLILIQGEDGQPQLAVINQADWDA 835

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BLAST of Pogo transposable element with ZNF domain vs. Ensembl Cavefish
Match: pogza (pogo transposable element with ZNF domain [Source:NCBI gene;Acc:103028128])

HSP 1 Score: 107.457 bits (267), Expect = 2.636e-23
Identity = 79/323 (24.46%), Postives = 145/323 (44.89%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIK--------RMNAPEPSRVKDLSNLV-----FPEELDSL---MCIECG-ESLSLDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVE 1780
            +++T +  + CT  C+ICE + ++      H++  H+  EMPY C +CNF +S Y DV+ HF++ H DTN L C YCL++F  +++                    +  H   H+    +HC  C L+F+   +   H+ L H++ +   +       + + I + S  + +  +DS L    S+P +K           A  P++ K + +++     F  +  S+    C+EC  E      H   ++ CS+C + +CC+ A+  H++ NH         R T    L       +     C+ C+ T   G+++  HL +
Sbjct:  511 HVETVHSQVECTALCKICELSFENEPVFLNHMKQMHKPGEMPYICQVCNFRSSFYSDVVIHFRELHKDTNFLQCSYCLKVFKSSNS--------------------YQLHYSKHQRKTIQHCDKCRLHFLYTKEKSDHKALYHRTHLKPVQLMGLKPGTRVTIRAYSTNKGD--DDSSLKAHNSSPPLKVPPSSSASASVAVPPAKRKPVESMLELMTKFQSQCKSVKKQFCMECNYEIPDFSVHFPTFVCCSLCHYCTCCSRAYANHMISNHI-------PRKTQNKYLNLYKPCPKLGQLSCSLCSYTTKVGDSMAKHLAD 804

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BLAST of Pogo transposable element with ZNF domain vs. Ensembl Cavefish
Match: znf280d (zinc finger protein 280C-like [Source:NCBI gene;Acc:103039265])

HSP 1 Score: 101.679 bits (252), Expect = 1.304e-21
Identity = 97/411 (23.60%), Postives = 167/411 (40.63%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRM-NAPEPSRVKDLSNLVFPE-------------ELDSLM-------CIECGESLSLDQHKRY---LPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNA--LTSHLVEECG-VCMVTLRPDP----QLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESE 2005
            +I++ +     T +C+ICE   ++   L  H++++H+  EMPY C +CN+ +S + DV  HF+  H +T +L+CP+CL++                         +++QH   H+    + C  C LNF+   +   H+ L H++   K  S             AS T   P+     P+      + R    P P   K  SN    +             EL  L        C EC +S   D +  Y   L CSVC++ + C  +F +H+LR H++      S+  L  G +T    V++    C  C       NA  +  HL+      C + L  D     +++A  +  + E +  +    +     G K ++ E+    +I  +I      + E  FQ +E
Sbjct:  417 HIESAHSPYESTTNCKICELAFETEQVLLEHMKDNHKPGEMPYGCQVCNYRSSFFSDVETHFRTVHENTKDLLCPFCLKVLRSGH--------------------MYMQHYMKHQKKGIQRCGKCRLNFLTYKEKVEHKTLYHRT-FKKPRSLEGLPPGTKVTIRASLTGGSPMSPGSTPSKSFVNLVPRSPERPRPVTHKSSSNAGRVKINQAGKNRNPHNNELKGLRLTPGVHKCTEC-QSEVTDAYVHYPLTLRCSVCKYRTSCQKSFGQHMLRFHSS-----SSKQRLGRGKRTLRG-VKSLTLVCLNCEFLANASNADRMCEHLLYRPNHTCQIILETDEESAVEMMAITDSDQVEAQGPVEEVSSTCSLFGTKGIVSEVSETEDIEPLIAE--VWSEEPSFQAAE 797

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BLAST of Pogo transposable element with ZNF domain vs. Ensembl Cavefish
Match: znf280d (zinc finger protein 280C-like [Source:NCBI gene;Acc:103039265])

HSP 1 Score: 99.7525 bits (247), Expect = 4.730e-21
Identity = 71/281 (25.27%), Postives = 120/281 (42.70%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRM-NAPEPSRVKDLSNLVFPE-------------ELDSLM-------CIECGESLSLDQHKRY---LPCSVCRFASCCADAFHRHVLRNHTN 1636
            +I++ +     T +C+ICE   ++   L  H++++H+  EMPY C +CN+ +S + DV  HF+  H +T +L+CP+CL++                         +++QH   H+    + C  C LNF+   +   H+ L H++   K  S             AS T   P+     P+      + R    P P   K  SN    +             EL  L        C EC   ++ D +  Y   L CSVC++ + C  +F +H+LR H++
Sbjct:  377 HIESAHSPYESTTNCKICELAFETEQVLLEHMKDNHKPGEMPYGCQVCNYRSSFFSDVETHFRTVHENTKDLLCPFCLKVLRSGH--------------------MYMQHYMKHQKKGIQRCGKCRLNFLTYKEKVEHKTLYHRT-FKKPRSLEGLPPGTKVTIRASLTGGSPMSPGSTPSKSFVNLVPRSPERPRPVTHKSSSNAGRVKINQAGKNRNPHNNELKGLRLTPGVHKCTECQSEVT-DAYVHYPLTLRCSVCKYRTSCQKSFGQHMLRFHSS 635

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BLAST of Pogo transposable element with ZNF domain vs. Ensembl Cavefish
Match: pogzb (pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3])

HSP 1 Score: 98.5969 bits (244), Expect = 1.424e-20
Identity = 84/328 (25.61%), Postives = 141/328 (42.99%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHK-----SQV--------VKTESYPDYKSSF-LAIESASETRNEPI--EDSPLPNV-FSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLM----CIECGESLS--LDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVE 1780
            ++++ +   + +  C+ICE   +S      H++N+H+  EMPY C +C + +SLY DV  HF+  H DT  L+C YCL++F                      +S + QH   H++    HC  C L F+   +   H+   HK     SQ+        V   +Y   K++  L+ +   ET N     + S   N+   +PQ       + S++ D   LV  +E   L     C+EC   +    + +  Y+ CS+C +++CC+ A+  H++  H     +  SR        T    V      C  C  T   G+ +  HLV+
Sbjct:  448 HVESVHNTRVSSSKCKICEWAFESEPVFLQHMKNTHKPGEMPYVCQVCEYRSSLYSDVHDHFRTWHEDTRFLLCIYCLKVFK--------------------HSSTYQQHFSRHQNSSVYHCNKCRLQFLATKEKIEHKVNHHKTFRRPSQLEGLQAGTKVTIRAYAAKKTAGPLSSKIGKETTNTSQFGQASAGNNLKLLSPQNTAAGRKQVSKMYDY--LVKFQEQRVLFGRQKCVECTFDIPDFANHYPTYVHCSLCLYSTCCSRAYANHMINYHVP-GRIHKSR--------TKKVTVSWLKLTCACCNYTTTQGDLMAKHLVQ 744

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BLAST of Pogo transposable element with ZNF domain vs. Ensembl Cavefish
Match: pogzb (pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3])

HSP 1 Score: 98.5969 bits (244), Expect = 1.494e-20
Identity = 84/328 (25.61%), Postives = 142/328 (43.29%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHK-----SQV--------VKTESYPDYKSSF-LAIESASETRN--EPIEDSPLPNV-FSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLM----CIECGESLS--LDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVE 1780
            ++++ +   + +  C+ICE   +S      H++N+H+  EMPY C +C + +SLY DV  HF+  H DT  L+C YCL++F                      +S + QH   H++    HC  C L F+   +   H+   HK     SQ+        V   +Y   K++  L+ +   ET N  +  + S   N+   +PQ       + S++ D   LV  +E   L     C+EC   +    + +  Y+ CS+C +++CC+ A+  H++  H     +  SR        T    V      C  C  T   G+ +  HLV+
Sbjct:  469 HVESVHNTRVSSSKCKICEWAFESEPVFLQHMKNTHKPGEMPYVCQVCEYRSSLYSDVHDHFRTWHEDTRFLLCIYCLKVFK--------------------HSSTYQQHFSRHQNSSVYHCNKCRLQFLATKEKIEHKVNHHKTFRRPSQLEGLQAGTKVTIRAYAAKKTAGPLSSKIGKETTNTSQFGQASAGNNLKLLSPQNTAAGRKQVSKMYDY--LVKFQEQRVLFGRQKCVECTFDIPDFANHYPTYVHCSLCLYSTCCSRAYANHMINYHVP-GRIHKSR--------TKKVTVSWLKLTCACCNYTTTQGDLMAKHLVQ 765

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BLAST of Pogo transposable element with ZNF domain vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008681.1 (pep scaffold:Pmarinus_7.0:GL478491:5106:8348:-1 gene:ENSPMAG00000007860.1 transcript:ENSPMAT00000008681.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 83.1889 bits (204), Expect = 3.651e-19
Identity = 44/140 (31.43%), Postives = 70/140 (50.00%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYP 1327
            C+ICE   D    L  H++ +H+  EMPY C +CNF +S+Y +V  HF+  H +T  L+CP+CL++                    +   + +LQH   H++     C+ C L F++K D     ++DHK+   KT   P
Sbjct:    9 CKICELNFDHEQMLLQHMKENHKPGEMPYVCQVCNFRSSVYAEVDSHFRAEHENTKSLLCPFCLKV--------------------IKSANGYLQHFMRHQNKGVFRCSKCRLQFLSKKD-----KMDHKTNHHKTHRKP 123

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Medaka
Match: pogza (pogo transposable element derived with ZNF domain [Source:NCBI gene;Acc:101162766])

HSP 1 Score: 120.939 bits (302), Expect = 1.574e-27
Identity = 87/311 (27.97%), Postives = 143/311 (45.98%), Query Frame = 2

Query:  893 ICTIS---CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTE---SYPDYKSS--FLAIESASETRN---EPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLP----CSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVE 1780
            IC+ S   CRICE   +   A   H++ +H+  EMPY C +C+F +S Y DV  HF+  H +T  L+C +CLR+   N                +     F +H + HK      C  C L+F+   +   H  L HK+ +   +     P  K +    A+    +++N   + I    + NV S P I+   AP+ + V+ L       +  S  CIEC    S+   +R+ P    CS+CRF +CC+ ++  H++ NHT       SR    F +    +   +E+  C  C++++  G+ + +HL E
Sbjct:  454 ICSKSVALCRICELAFEDEPAFMRHMKTTHKPGEMPYICQVCDFRSSFYSDVWSHFQDTHANTKHLLCQFCLRVLRSN----------------ICYQQHFARHQRKHK----LSCDKCRLHFLYVKERVEHNALCHKTHIKPPQLCGLKPGTKVTVRMYAMVGGPKSQNGVLKSITPCKVVNVSSPPPIQ--EAPKKNAVEGLRLSGLKTDRASQSCIEC--LASVPDFQRHFPSVVRCSLCRFVTCCSASYANHMINNHTT------SRRARQFPVIFQPDPRLSEEVICVACSLSSFRGDVIANHLNE 734

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BLAST of Pogo transposable element with ZNF domain vs. Ensembl Medaka
Match: znf280d (zinc finger protein 280D [Source:NCBI gene;Acc:101156072])

HSP 1 Score: 94.3597 bits (233), Expect = 2.034e-19
Identity = 87/364 (23.90%), Postives = 153/364 (42.03%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPD------------YKSSFLAIES-----ASETR--------NEPIEDSPLPNVF------SAPQIKRMNA----PEPSRVKDLSNLVFPEELDSL-------MCIECGESLSLDQHKRYLP----CSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECG-VCMVTLRPD 1816
            +I++ +  I  + +C+ICE   +S   L  H++ +H+  EMPY C +CN+ +S + D+  HF+  H +T +L+CP+CL++                       + +F+QH   H+      C  C LNF+   +     ++DH++ V KT   P              ++S    ES     AS  R        + P    P  ++       SA Q  +MN      E ++ ++  +     EL  L       +CIEC     +D    + P    C  C++ + C  +   H+++ H+   +    R  L    KTN + ++     C  C +  +D + +T HLV++   VC V    D
Sbjct:  380 HIESAHSPIESSTNCKICELAFESEQVLLEHMKANHKPGEMPYVCQVCNYRSSFFSDLEAHFRSVHENTKDLLCPFCLKVLRT--------------------SHIFMQHYMKHQRKGIYRCGKCRLNFLTYKE-----KVDHRTHVHKTFRKPKALEGLPPGTKVTIRASLTGKESTPVIPASPKRSVTPECRSSSPFTCEPSNSLTKFRLNDSAAQKAKMNQNKKRQEQNKKQERRSFRHNLELKHLSVKTGRYICIECNS--VVDDFFVHFPLLSNCGACKYRTSCKSSIENHMIKYHSTFRK----RRVLKRNQKTNVSSLKL-PLVCLTCDLL-VDSDLMTKHLVKQPNHVCKVIKEKD 710

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Medaka
Match: znf280d (zinc finger protein 280D [Source:NCBI gene;Acc:101156072])

HSP 1 Score: 93.9745 bits (232), Expect = 2.494e-19
Identity = 87/364 (23.90%), Postives = 153/364 (42.03%), Query Frame = 2

Query:  866 YIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPD------------YKSSFLAIES-----ASETR--------NEPIEDSPLPNVF------SAPQIKRMNA----PEPSRVKDLSNLVFPEELDSL-------MCIECGESLSLDQHKRYLP----CSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECG-VCMVTLRPD 1816
            +I++ +  I  + +C+ICE   +S   L  H++ +H+  EMPY C +CN+ +S + D+  HF+  H +T +L+CP+CL++                       + +F+QH   H+      C  C LNF+   +     ++DH++ V KT   P              ++S    ES     AS  R        + P    P  ++       SA Q  +MN      E ++ ++  +     EL  L       +CIEC     +D    + P    C  C++ + C  +   H+++ H+   +    R  L    KTN + ++     C  C +  +D + +T HLV++   VC V    D
Sbjct:  377 HIESAHSPIESSTNCKICELAFESEQVLLEHMKANHKPGEMPYVCQVCNYRSSFFSDLEAHFRSVHENTKDLLCPFCLKVLRT--------------------SHIFMQHYMKHQRKGIYRCGKCRLNFLTYKE-----KVDHRTHVHKTFRKPKALEGLPPGTKVTIRASLTGKESTPVIPASPKRSVTPECRSSSPFTCEPSNSLTKFRLNDSAAQKAKMNQNKKRQEQNKKQERRSFRHNLELKHLSVKTGRYICIECNS--VVDDFFVHFPLLSNCGACKYRTSCKSSIENHMIKYHSTFRK----RRVLKRNQKTNVSSLKL-PLVCLTCDLL-VDSDLMTKHLVKQPNHVCKVIKEKD 707

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Medaka
Match: pogzb (pogo transposable element derived with ZNF domain b [Source:ZFIN;Acc:ZDB-GENE-100609-3])

HSP 1 Score: 87.4261 bits (215), Expect = 3.977e-17
Identity = 75/322 (23.29%), Postives = 132/322 (40.99%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKS-------------QVVKTESYPDYKSSFL---------------AIESASETRNEPIEDSP-LPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLS--LDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVE 1780
            CRICE   ++  A   H+++SH+  EMPY C +C+F +S Y DV+ HF   H ++  L+C +CL++         NP               + QHL  H+     HC  C L F+   D   H+  +H+S               V   +Y   +   +                I   +E +  P+  +P +PN       +R+      R       V        +C+ECG ++      +  ++ C +C ++SCC+ A+  H++++H     +  SR  +L   +     V      C+ C  + L G+ +  HL++
Sbjct:  174 CRICEWAFENEPAFLNHMKSSHKPGEMPYACQVCSFRSSFYSDVLQHFASFHRESCFLLCVFCLKVTR-------NPVS-------------YQQHLLRHQVSQAFHCNRCRLQFVLLKDKMQHKLENHRSFRRPKQLEGLPPGSKVTIRTYGKVRPQVMPTRGRLLQSPASLIQPIRIKTEPQKSPLSKNPSIPNKCPKSPSRRVRRDHSGRTSSADGPV--------VCLECGANVWDFSAHYPTHVHCLLCPYSSCCSRAYASHMIQHH-----LPRSRDKVLPLHRRPPPCVFV--LRCSHCDFSPLTGDQMAEHLLK 460

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BLAST of Pogo transposable element with ZNF domain vs. Ensembl Medaka
Match: ENSORLT00000020334.2 (zinc finger protein 436-like [Source:NCBI gene;Acc:101169324])

HSP 1 Score: 50.447 bits (119), Expect = 4.126e-6
Identity = 62/212 (29.25%), Postives = 91/212 (42.92%), Query Frame = 2

Query:  845 PDGEQ---RVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICN--FHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDL-----LFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTE--SYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNA 1444
            P+G++   R+ +D +        SC +C KT  S+  LA HL +  +E +  ++CGICN  FH S +  ++ H KK H       CP C + F                    G+ S    HLKTH+ L      FK CT C  +F  K     H RL  + +V K +      +  S L    A E   E  + +P P + S PQ  + +A
Sbjct:   68 PNGQRPHRRIRLDPH--------SCSLCSKTFVSSAHLALHLASHSKERK--FQCGICNKYFHQSSH--LVAH-KKIHSGDRPFKCPDCGKTF--------------------GRAS----HLKTHRRLHTGEKPFK-CTFCGKSFTQKAGLLAHVRLHTEEKVYKCKKCGLAFHSLSLLLSHKAEEASGE-AKAAPAP-LLSQPQEAQSSA 239

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BLAST of Pogo transposable element with ZNF domain vs. Planmine SMEST
Match: SMESG000014324.1 (SMESG000014324.1)

HSP 1 Score: 1037.33 bits (2681), Expect = 0.000e+0
Identity = 499/500 (99.80%), Postives = 500/500 (100.00%), Query Frame = 2

Query:  824 EHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV 2323
            EHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSI+TGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV
Sbjct:  300 EHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIMTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV 799

[Close]

Query:  824 EHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV 2323
            EHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSI+TGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV
Sbjct:  282 EHMSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIMTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIEDTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGISSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVLLICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV 781

[Close]

BLAST of Pogo transposable element with ZNF domain vs. Planmine SMEST
Match: SMESG000017945.1 (SMESG000017945.1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.858e-17
Identity = 83/296 (28.04%), Postives = 127/296 (42.91%), Query Frame = 2

Query:  908 CRICEKTCDSNFALAYHLQNSHRENEMPYRCGICNFH-TSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIPMNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKH--CTGCTLNFINKTDFELHRRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQIKRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLS-LDQH-KRYLPCSVCRFASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTKCAITNLDGNALTSHLVE 1780
            C IC     S   L  HL+  H   +MPY C ICNF+ TS    +  HF   H  T  +ICP+C+  F     +P+  +E   I+      + F+ H++ H  LL K   C  C L FI K     H+ + H+ + +  ++          +   S   N+ I+ S   NV   P              D S L       S+ C EC ES+S L QH + +  C++C F S C ++F +H+ +NH+   E          G   NS ++        +C   ++ G+ + SHL E
Sbjct:  125 CEICCLDFLSAIGLGQHLETKHTYQDMPYVCFICNFYRTSFLSQLKQHFYDHHKSTEFIICPFCILPF----ELPI-LSEKDYILDA----NQFVVHMEKH--LLKKQFSCDKCVLKFITKLSLIYHKTVYHEGRALLNDT--------ADLSDKSGNNNKIIKKS--LNVIDQP-------------IDTSKLSINSYKLSMACAECRESISNLSQHFQSFNLCTLCGFRSYCLNSFRKHI-KNHSGQVE----------GTHFNSIDIYQRGVLICECGFHSMHGDKMASHLCE 375

The following BLAST results are available for this feature:

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Human
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Celegans
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Fly
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Zebrafish
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Xenopus
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Mouse
BLAST of Pogo transposable element with ZNF domain vs. UniProt/SwissProt
BLAST of Pogo transposable element with ZNF domain vs. TrEMBL
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Cavefish
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Sea Lamprey
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Yeast
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Nematostella
BLAST of Pogo transposable element with ZNF domain vs. Ensembl Medaka
BLAST of Pogo transposable element with ZNF domain vs. Planmine SMEST

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
POGZ	1.859e-28	27.48	pogo transposable element derived with ZNF domain ...	[more]
POGZ	1.982e-28	27.48	pogo transposable element derived with ZNF domain ...	[more]
POGZ	2.179e-28	27.48	pogo transposable element derived with ZNF domain ...	[more]
POGZ	2.207e-28	27.48	pogo transposable element derived with ZNF domain ...	[more]
POGZ	3.337e-28	26.84	pogo transposable element derived with ZNF domain ...	[more]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
row-1	4.468e-7	30.53	Relative of Woc homolog [Source:UniProtKB/TrEMBL;...	[more]
row-1	4.468e-7	30.53	Relative of Woc homolog [Source:UniProtKB/TrEMBL;...	[more]
row-1	2.303e-6	30.00	Relative of Woc homolog [Source:UniProtKB/TrEMBL;...	[more]
row-1	2.303e-6	30.00	Relative of Woc homolog [Source:UniProtKB/TrEMBL;...	[more]
row-1	2.422e-6	30.00	Relative of Woc homolog [Source:UniProtKB/TrEMBL;...	[more]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2


Match Name	E-value	Identity	Description
row	8.870e-17	25.65	gene:FBgn0033998 transcript:FBtr0329939	[more]
row	9.204e-17	25.65	gene:FBgn0033998 transcript:FBtr0087402	[more]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pogzb	1.565e-23	23.69	pogo transposable element derived with ZNF domain ...	[more]
pogzb	1.765e-23	23.69	pogo transposable element derived with ZNF domain ...	[more]
znf280d	4.148e-23	25.00	zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE...	[more]
znf280d	4.263e-23	25.00	zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE...	[more]
znf280d	4.304e-23	25.00	zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE...	[more]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4


Match Name	E-value	Identity	Description
ENSXETT00000010804.1	1.150e-14	24.91	zinc finger protein 280D [Source:NCBI gene;Acc:100...	[more]
ENSXETT00000010751.1	2.627e-14	30.00	zinc finger protein 280D [Source:NCBI gene;Acc:100...	[more]
celf3	2.613e-10	22.49	CUGBP, Elav-like family member 3 [Source:Xenbase;A...	[more]
celf3	2.225e-9	23.96	CUGBP, Elav-like family member 3 [Source:Xenbase;A...	[more]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Pogz	1.356e-27	27.53	pogo transposable element with ZNF domain [Source:...	[more]
Pogz	1.538e-27	27.53	pogo transposable element with ZNF domain [Source:...	[more]
Pogz	1.690e-27	27.53	pogo transposable element with ZNF domain [Source:...	[more]
Pogz	2.284e-27	27.53	pogo transposable element with ZNF domain [Source:...	[more]
Zfp280d	6.032e-16	30.00	zinc finger protein 280D [Source:MGI Symbol;Acc:MG...	[more]

BLAST of Pogo transposable element with ZNF domain vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q7Z3K3\|POGZ_HUMAN	9.518e-28	27.48	Pogo transposable element with ZNF domain OS=Homo ...	[more]
sp\|Q8BZH4\|POGZ_MOUSE	9.486e-27	27.53	Pogo transposable element with ZNF domain OS=Mus m...	[more]
sp\|Q68FE8\|Z280D_MOUSE	4.468e-15	30.00	Zinc finger protein 280D OS=Mus musculus OX=10090 ...	[more]
sp\|Q6N043\|Z280D_HUMAN	1.221e-14	30.30	Zinc finger protein 280D OS=Homo sapiens OX=9606 G...	[more]
sp\|Q6P3Y5\|Z280C_MOUSE	3.875e-13	27.74	Zinc finger protein 280C OS=Mus musculus OX=10090 ...	[more]

BLAST of Pogo transposable element with ZNF domain vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A2Z3D3W2	0.000e+0	99.80	Factor for initiating regeneration 1 OS=Schmidtea ...	[more]
A0A4Z2DHL6	1.582e-63	28.92	Pogo transposable element with ZNF domain OS=Schis...	[more]
A0A3P8I2T0	1.139e-61	44.40	C2H2-type domain-containing protein OS=Echinostoma...	[more]
A0A183B161	1.174e-61	44.40	C2H2-type domain-containing protein OS=Echinostoma...	[more]
A0A5K3FF07	6.315e-60	30.68	Uncharacterized protein OS=Mesocestoides corti OX=...	[more]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pogza	2.636e-23	24.46	pogo transposable element with ZNF domain [Source:...	[more]
znf280d	1.304e-21	23.60	zinc finger protein 280C-like [Source:NCBI gene;Ac...	[more]
znf280d	4.730e-21	25.27	zinc finger protein 280C-like [Source:NCBI gene;Ac...	[more]
pogzb	1.424e-20	25.61	pogo transposable element derived with ZNF domain ...	[more]
pogzb	1.494e-20	25.61	pogo transposable element derived with ZNF domain ...	[more]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
ENSPMAT00000008681.1	3.651e-19	31.43	pep scaffold:Pmarinus_7.0:GL478491:5106:8348:-1 ge...	[more]

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Pogo transposable element with ZNF domain vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
pogza	1.574e-27	27.97	pogo transposable element derived with ZNF domain ...	[more]
znf280d	2.034e-19	23.90	zinc finger protein 280D [Source:NCBI gene;Acc:101...	[more]
znf280d	2.494e-19	23.90	zinc finger protein 280D [Source:NCBI gene;Acc:101...	[more]
pogzb	3.977e-17	23.29	pogo transposable element derived with ZNF domain ...	[more]
ENSORLT00000020334.2	4.126e-6	29.25	zinc finger protein 436-like [Source:NCBI gene;Acc...	[more]

BLAST of Pogo transposable element with ZNF domain vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000014324.1	0.000e+0	99.80	SMESG000014324.1	[more]
SMESG000014324.1	0.000e+0	99.80	SMESG000014324.1	[more]
SMESG000017945.1	4.858e-17	28.04	SMESG000017945.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30031380 ID=SMED30031380|Name=Pogo transposable element with ZNF domain|organism=Schmidtea mediterranea sexual|type=transcript|length=2350bp
TGCCCTATAGACATTTCTGGAGTAAAAAAAATAACATAAAATTTATATTG
CTTACAAATTGTAAGTAGCATTAAGTTATACTTATTTTTTAGCTTCTCTT
GGCATTTAATATTAATTTTTTAAATAAATTATATTCCCTTTTTATAGATA
AAAAAATTTGTTCCAATTAAAAAAAAGATGTATTTTTTCGAATAGAAAGA
CTTAAAAAGTAATTCAATACAGTAAATACAAAATTATGATTTTATGCTGT
CATACATTTGGTATTGTATAGATATTTACTAATTAGAATCAATAATGATG
GATCATCGTACTCACACATCAGCAGAGAGTCATTCATTCAGTTCCCGTTG
TTCCCATATAGACTGTCGTATAATGTTTTATGCGTAACTTAAGGGCAACA
CTATTCCTAGCTAATTTTTTATCATCATGTCAATTGTAGTTATTGAACTA
AATCAATAGCACAATAGCTAATCACCGCTTCACATGATTGATATTTACAC
AATAGATAGTTATTAACAATCCAAATGAGATCATGTGGACATATTCTAAA
TTCTAACCAATCATTATTTGAATCGAGATTCCTTTGTTAGTATTATCGAT
TTTTCGATGAACAACAAAACTAGACAGCTAGTGCTTCAGTTCCGGAAATT
ACTCTACAAATAATTCAATTTAAAATTACTATAAAAACAATGAATAATGA
AATACGAAAAGTACACATTTCGGAACTTCTCACGAGAAATACCACAATTT
AAATCAAAACAACATTTCAAATGATAAAATGAATATTTTAATATCAAATT
TTCAAAATTGATTATTATATCAGGAACACATGTCAGTTATTGGTCCAGAT
GGTGAACAAAGAGTTTACATAGATACTAATAATGGGAATATAATATGCAC
GATTTCTTGTCGAATTTGCGAAAAAACATGCGACAGTAACTTTGCATTAG
CTTATCACTTGCAAAATTCCCACCGAGAAAATGAAATGCCTTATCGATGT
GGCATTTGTAATTTCCATACATCATTATACCAAGACGTTATTGGGCATTT
TAAAAAAGCGCATTGTGACACCAACGAACTAATCTGTCCGTATTGCTTGA
GAATATTTAATATAAACGATGCCATCCCAATGAATCCCAACGAACCTCCA
AGCATCGTGACCGGCGTCGGTCAAACTAGCTTGTTCTTGCAGCACTTAAA
GACCCACAAGGATTTATTATTCAAACATTGCACAGGATGTACATTGAATT
TCATTAATAAAACCGATTTCGAACTTCATCGTCGTCTCGATCATAAAAGT
CAAGTTGTCAAAACGGAATCATATCCTGATTACAAGTCATCATTTTTGGC
AATTGAGTCTGCATCTGAAACTAGAAACGAACCAATTGAAGATAGTCCTC
TGCCGAATGTGTTCAGTGCTCCACAGATTAAACGCATGAACGCTCCAGAA
CCGTCTCGTGTTAAAGATCTGTCAAATTTAGTTTTCCCCGAGGAATTAGA
TTCATTGATGTGTATCGAATGCGGAGAAAGCTTAAGCTTGGATCAGCACA
AACGTTATCTGCCATGTTCTGTCTGTCGATTTGCGAGCTGCTGTGCCGAT
GCATTTCATCGGCATGTGTTACGAAACCACACTAACGTTGAAGAAGTTGA
CGATTCTAGAGTCACTCTACTTTTTGGATTGAAAACTAATTCAAATGAAG
TGAGAGCGGAAGATTTCTATTGTACAAAATGTGCAATTACAAATCTTGAT
GGGAATGCCCTGACAAGTCATCTGGTGGAAGAGTGTGGAGTATGCATGGT
CACACTGAGACCGGATCCCCAGTTATTGGCCGCTCGAGAACAAGCAGAAA
AGGAACACGAAACAATGATTGGCATAGAAGATACAGAGCTGGAAAGTGAC
GGGAACAAAAACATGATAATGGAGCTAGAAAACGTAACGAACATTATGGA
TGTTATTGGAGGAAGGCCAGCCCAAGCTATTGAAGAGCAATTCCAAGAAT
CGGAACTGGCTGCTGCTGCCGGCGGTATCAGCAGCAGCAATGACGATGGG
AATCAAGGCCAAATGATGATTGTTGATGAATCCGAGTCCATGGATCAACA
GTTGATCGACGATCCAAACACTCATACAATTTCCATCCCAGAGGGAATCA
ATTTGAAACCCGGAGAATCTCTGGTTTTATTGATTTGCGAGAACAATACC
GAGGAATTCATCATTATAAATACCGCAGATATCAATACTCCGGAAATGCA
GGAATTTTTCACCAATCGTCGGAGTCAAAATGTTTACGTGGTGCAGAGCA
ATGATGAAATGCCGGAATCAGTTTAGTTATTTGAGTGTGAATAAATGTCT

protein sequence of SMED30031380-orf-1

>SMED30031380-orf-1 ID=SMED30031380-orf-1|Name=SMED30031380-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=499bp
MSVIGPDGEQRVYIDTNNGNIICTISCRICEKTCDSNFALAYHLQNSHRE
NEMPYRCGICNFHTSLYQDVIGHFKKAHCDTNELICPYCLRIFNINDAIP
MNPNEPPSIVTGVGQTSLFLQHLKTHKDLLFKHCTGCTLNFINKTDFELH
RRLDHKSQVVKTESYPDYKSSFLAIESASETRNEPIEDSPLPNVFSAPQI
KRMNAPEPSRVKDLSNLVFPEELDSLMCIECGESLSLDQHKRYLPCSVCR
FASCCADAFHRHVLRNHTNVEEVDDSRVTLLFGLKTNSNEVRAEDFYCTK
CAITNLDGNALTSHLVEECGVCMVTLRPDPQLLAAREQAEKEHETMIGIE
DTELESDGNKNMIMELENVTNIMDVIGGRPAQAIEEQFQESELAAAAGGI
SSSNDDGNQGQMMIVDESESMDQQLIDDPNTHTISIPEGINLKPGESLVL
LICENNTEEFIIINTADINTPEMQEFFTNRRSQNVYVVQSNDEMPESV*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **molecular function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0046872	metal ion binding

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000014	zeta neoblast
PLANA:0000429	neoblast
PLANA:0002109	X1 cell
PLANA:0002111	X2 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR013087	Znf_C2H2_type
IPR015880	Znf_C2H2-like
IPR007087	Znf_C2H2
IPR014760	Serum_albumin_N

Vocabulary: **cellular component**
Term	Definition
GO:0005615	extracellular space

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 55..78 e-value: 5.0 score: 16.0 coord: 244..267 e-value: 13.0 score: 12.2 coord: 25..48 e-value: 0.11 score: 21.6 coord: 132..155 e-value: 16.0 score: 11.4
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 134..155
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 27..48
None	No IPR available	GENE3D	G3DSA:3.30.160.60		coord: 25..96 e-value: 2.8E-6 score: 29.3
None	No IPR available	PANTHER	PTHR24403	zinc finger protein	coord: 24..316
None	No IPR available	PANTHER	PTHR24403:SF59	POGO TRANSPOSABLE ELEMENT WITH ZNF DOMAIN	coord: 24..316

Main menu

Pogo transposable element with ZNF domain

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 10

Owlery

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