Vacuolar protein sorting-associated protein VTA1 homolog
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30031375 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Human
Match: VTA1 (vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]) HSP 1 Score: 222.246 bits (565), Expect = 1.660e-70 Identity = 123/270 (45.56%), Postives = 170/270 (62.96%), Query Frame = 3 Query: 126 KLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQA---TQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGG-HLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 + K + +L+TA E +KRDPVVAYYCRLY++Q GM++D + E ++FL +LMD L+ KK+L DNE+I E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ E+D A TQP +P + T P + + G + PAE V STG L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 13 QFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAE--VPHSTGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGRE 280
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Human
Match: VTA1 (vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]) HSP 1 Score: 214.542 bits (545), Expect = 4.064e-67 Identity = 119/295 (40.34%), Postives = 169/295 (57.29%), Query Frame = 3 Query: 126 KLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQA---TQPPEPMG----NPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPST----------------------GGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 + K + +L+TA E +KRDPVVAYYCRLY++Q GM++D + E ++FL +LMD L+ KK+L DNE+I E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ E+D A TQP +P +P+ +P + + P + VA +T L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 13 QFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAEVPHSTGVASNTIQPTPQTIPAIDPALFNTISQGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGRE 307
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Human
Match: VTA1 (vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]) HSP 1 Score: 159.844 bits (403), Expect = 6.590e-47 Identity = 98/230 (42.61%), Postives = 135/230 (58.70%), Query Frame = 3 Query: 246 SSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQA---TQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGG-HLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +SE+ +L+ L KK+L DNE+I E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ E+D A TQP +P + T P + + G + PAE V STG L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 2 TSETLWWLITL-------KKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAE--VPHSTGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGRE 222
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Human
Match: VTA1 (vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]) HSP 1 Score: 150.984 bits (380), Expect = 3.452e-43 Identity = 94/255 (36.86%), Postives = 134/255 (52.55%), Query Frame = 3 Query: 246 SSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQA---TQPPEPMG----NPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPST----------------------GGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +SE+ +L+ L KK+L DNE+I E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ E+D A TQP +P +P+ +P + + P + VA +T L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 2 TSETLWWLITL-------KKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAEVPHSTGVASNTIQPTPQTIPAIDPALFNTISQGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGRE 249
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Celegans
Match: T23G11.7 (pep chromosome:WBcel235:I:7679454:7683041:1 gene:WBGene00011972.1 transcript:T23G11.7b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T23G11.7) HSP 1 Score: 162.155 bits (409), Expect = 3.104e-47 Identity = 80/197 (40.61%), Postives = 124/197 (62.94%), Query Frame = 3 Query: 111 SNIPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGE--IPQSGPM-DNEQDIS--GVNF-PTVPQATQPPEPMGNPTPLP 683 +N+P KP+ Y+K A E RDPV+ Y+C Y+VQ M+LD+S+ E++++L L+ L+ K +L DN++I +ET+ QAH+E +A KLF+FADKK++ G+ D + + +F +G +MD+LS+FG++ E +KYAKWK+ I CL+ G +P S D + D+S G F P P ++ P E N P P Sbjct: 3 ANLPPAFKPIAHYIKIANENASRDPVIYYWCLFYAVQTAMKLDKSTVEARQYLTGLLTTLEAIKTQLADNDAIKNETIAQAHIESFAEKLFNFADKKEKTGNVDKSVVHAFYTAGHVMDILSLFGEIDEPFLSSKKYAKWKSTQIFTCLRDGTPYVPSSQETEDADDDLSQFGAQFQPNAPSSSGPQEHSYNQPPAP 199
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Fly
Match: Vta1 (gene:FBgn0035251 transcript:FBtr0072809) HSP 1 Score: 187.578 bits (475), Expect = 7.318e-57 Identity = 111/316 (35.13%), Postives = 159/316 (50.32%), Query Frame = 3 Query: 102 MSVSNIPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPM---DNEQDISGVNFPTVPQAT-------------------QPPEP----------------MGNPTPLPR----SQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 M P LK + +LK A E + RD V+AY+ RLY++Q G++ + E + L+ +MD L++ KK+ +NE+I +E QAH+E+YALKLF +ADK+DRE +F +++F SG L D+L FG++ E+ RKYAKWKA YI CLK GE P GP+ D+E ++ G N + QPP P + NP LP +KP + +A + P G ++P+ A+K CKYA SAL Y D TAI+ L K L LL +G + Sbjct: 1 MEFPPCPPSLKSIQHFLKLAQEHDTRDVVIAYWARLYALQVGLKASTQTGEETKLLLGIMDWLEQMKKQYAENEAITNEVAAQAHIENYALKLFLYADKQDREENFGKNVVKAFYSSGVLYDILQTFGELSEEALHNRKYAKWKAAYIHNCLKNGETPIPGPLPDDDDEAELEGENANASADTSPEDAAGAAAPAPYQPEPDSQPPAPSSPTTSGVVPPTAEEVLNNPNKLPSPPVDEEKPGGFVPYVPTAQPNPATAATIYQPIVPVAGVQITPDQMITAQKYCKYAGSALNYDDVKTAIENLQKALKLLSTGSE 316
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Zebrafish
Match: vta1 (vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]) HSP 1 Score: 220.32 bits (560), Expect = 1.211e-69 Identity = 130/302 (43.05%), Postives = 169/302 (55.96%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNF----------PTVPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVA--------PSTGGHLSP---------------EDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +P +LK + YL+TA E EKRDPVVAYYCRLY++Q GM+LD + E ++FL++LMD L+ KKEL DNESI E VG AH+E+YALK+F +AD +DR F I+SF S L DVLSVFG++ E+ + RKYAKWKA YI CLK GE PQ GP+ E + F P P +Q P G+P+ P + ++ + A A P T + P EDFT+A+K CKYA SALQY+D TA+ L K L LL +GK+ Sbjct: 3 LPPQLKAIQHYLRTAQEHEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLEMMKKELGDNESISQEIVGNAHIENYALKMFLYADNEDRSERFHKNMIKSFYTSSLLFDVLSVFGELSEENLQQRKYAKWKAAYIHNCLKNGETPQPGPIGMEGEAYDDEFGAEGGGPSQAPDNPPHSQ-PSFRGHPSDQPPTSNFSNIQIPPGSHAPANTPAEIPHPEAAQPVKPVPVPRTMPVVDPSLLNNTQEGDVRLTPEDFTRAQKYCKYAGSALQYEDVGTAVQNLQKALKLLTTGKE 303
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Zebrafish
Match: vta1 (vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]) HSP 1 Score: 195.667 bits (496), Expect = 5.698e-60 Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNE 599 +P +LK + YL+TA E EKRDPVVAYYCRLY++Q GM+LD + E ++FL++LMD L+ KKEL DNESI E VG AH+E+YALK+F +AD +DR F I+SF S L DVLSVFG++ E+ + RKYAKWKA YI CLK GE PQ GP+ E Sbjct: 3 LPPQLKAIQHYLRTAQEHEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLEMMKKELGDNESISQEIVGNAHIENYALKMFLYADNEDRSERFHKNMIKSFYTSSLLFDVLSVFGELSEENLQQRKYAKWKAAYIHNCLKNGETPQPGPIGME 163 HSP 2 Score: 59.3066 bits (142), Expect = 1.447e-9 Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 3 Query: 792 LSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 L+PEDFT+A+K CKYA SALQY+D TA+ L K L LL +GK+ Sbjct: 259 LTPEDFTRAQKYCKYAGSALQYEDVGTAVQNLQKALKLLTTGKE 302
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Xenopus
Match: trpm4 (transient receptor potential cation channel, subfamily M, member 4 [Source:Xenbase;Acc:XB-GENE-960842]) HSP 1 Score: 186.422 bits (472), Expect = 1.796e-56 Identity = 108/268 (40.30%), Postives = 148/268 (55.22%), Query Frame = 3 Query: 204 RLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPM-------------------DNEQDISGVNFPTVPQATQ-----PP---EPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTG-GHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 RLYS+Q GM++D S E ++FL +LMD L+ KK+L D ESI E VG AHVE+YALK+F +AD +DR G F+ ++SF + L+D L+VFG++ E+ + RKYA+WKA YI CLK GE PQ+GP+ N + S P +P PP P P +P S AS A + + + A + G L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 16 RLYSMQTGMKIDSKSPECRKFLSKLMDQLEALKKQLGDCESITQEIVGSAHVENYALKMFLYADNEDRAGRFNKNMVKSFYTASLLLDTLAVFGELTEENVQHRKYARWKATYIHNCLKNGETPQAGPIGMEGEEYDEENEGEGSSSFSNRESPSAYQPPNIPTPNYTGIQIPPGAHAPANTPAEVPHSTGVASNAIAHPSPQNIPAVDPSLYN--AKTQGDARLTPEDFARAQKFCKYAGSALQYEDVNTAVQNLQKALKLLTTGRE 281
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Mouse
Match: Vta1 (vesicle (multivesicular body) trafficking 1 [Source:MGI Symbol;Acc:MGI:1913451]) HSP 1 Score: 213.001 bits (541), Expect = 1.283e-66 Identity = 119/297 (40.07%), Postives = 167/297 (56.23%), Query Frame = 3 Query: 126 KLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMD--------NEQDISGVNFPTVPQATQ--------------------PP---EPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 + K + +L+TA E +KRDPVVAYYCRLY++Q GM++D + E ++FL +LMD L+ KK+L DNE++ E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ +D+ + PT P PP P P +P S S A + A + A L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 13 QFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAVTQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEENDVEENEDVGATSLPTQPPQPSSSSAYDPSNLAPGSYSGIQIPPGAHAPANTPAEVPHSTGVTSNAVQPSPQTVPAAPAVDPDLYTASQGDIRLTPEDFARAQKYCKYAGSALQYEDVGTAVQNLQKALRLLTTGRE 309
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Mouse
Match: Vta1 (vesicle (multivesicular body) trafficking 1 [Source:MGI Symbol;Acc:MGI:1913451]) HSP 1 Score: 191.43 bits (485), Expect = 6.144e-59 Identity = 108/246 (43.90%), Postives = 153/246 (62.20%), Query Frame = 3 Query: 126 KLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMD--------NEQDISGVNFPTVPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGG-HLSPEDFTQAEKLCKY 836 + K + +L+TA E +KRDPVVAYYCRLY++Q GM++D + E ++FL +LMD L+ KK+L DNE++ E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ +D+ + P TQPP+P + P + P S + G + PAE V STG L+PEDF +A+K CKY Sbjct: 13 QFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAVTQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEENDVEENEDVGATSLP-----TQPPQPSSSSAYDPSNLAPGSYSGIQIPPGAHAPANTPAE--VPHSTGDIRLTPEDFARAQKYCKY 251
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. UniProt/SwissProt
Match: sp|Q32L63|VTA1_BOVIN (Vacuolar protein sorting-associated protein VTA1 homolog OS=Bos taurus OX=9913 GN=VTA1 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.413e-69 Identity = 120/300 (40.00%), Postives = 170/300 (56.67%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNE---------QDISGVNFPTVPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPST----------------------GGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +P + K + +L+TA E +KRDPVVAYYCRLY++Q GM++D + E ++FL LMD L+ KK+L DNE+I E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ E +D + PT P QP +P+ +P S + + P + V +T L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 10 LPPQFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSRLMDQLEALKKQLGDNEAITQEIVGSAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNVDVEEYEDAGATSLPTQP--LQPSSSTYDPSNMPSSSYTGIQIPPGAHAPANTPAEVPHSTGVTSNTIQPTPQTIPAIDPALFSTVSQGDIRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGRE 307
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. UniProt/SwissProt
Match: sp|Q9NP79|VTA1_HUMAN (Vacuolar protein sorting-associated protein VTA1 homolog OS=Homo sapiens OX=9606 GN=VTA1 PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.952e-66 Identity = 119/295 (40.34%), Postives = 169/295 (57.29%), Query Frame = 3 Query: 126 KLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQA---TQPPEPMG----NPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPST----------------------GGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 + K + +L+TA E +KRDPVVAYYCRLY++Q GM++D + E ++FL +LMD L+ KK+L DNE+I E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ E+D A TQP +P +P+ +P + + P + VA +T L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 13 QFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDIEENEDAGAASLPTQPTQPSSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAEVPHSTGVASNTIQPTPQTIPAIDPALFNTISQGDVRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGRE 307
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. UniProt/SwissProt
Match: sp|Q5R5W5|VTA1_PONAB (Vacuolar protein sorting-associated protein VTA1 homolog OS=Pongo abelii OX=9601 GN=VTA1 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 3.892e-66 Identity = 119/297 (40.07%), Postives = 169/297 (56.90%), Query Frame = 3 Query: 126 KLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMD--------NEQDISGVNFPTVPQATQPPEPMG-NPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPST----------------------GGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 + K + +L+TA E +KRDPVVAYYCRLY++Q GM++D + E ++FL +LMD L+ KK+L DNE+I E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ +D + PT P TQP +P+ +P + + P + VA +T L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 13 QFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAITQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEDNDVEENEDAGAASLPTQP--TQPSSSSTYDPSNMPSGNYTGIQIPPGAHAPANTPAEVPHSTGVASNTIQPTPQTIPAIDPALFNTISQGDIRLTPEDFARAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGRE 307
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. UniProt/SwissProt
Match: sp|Q9CR26|VTA1_MOUSE (Vacuolar protein sorting-associated protein VTA1 homolog OS=Mus musculus OX=10090 GN=Vta1 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 8.972e-66 Identity = 119/297 (40.07%), Postives = 167/297 (56.23%), Query Frame = 3 Query: 126 KLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMD--------NEQDISGVNFPTVPQATQ--------------------PP---EPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 + K + +L+TA E +KRDPVVAYYCRLY++Q GM++D + E ++FL +LMD L+ KK+L DNE++ E VG AH+E+YALK+F +AD +DR G F I+SF + L+DV++VFG++ ++ K RKYA+WKA YI CLK GE PQ+GP+ +D+ + PT P PP P P +P S S A + A + A L+PEDF +A+K CKYA SALQY+D TA+ L K L LL +G++ Sbjct: 13 QFKSIQHHLRTAQEHDKRDPVVAYYCRLYAMQTGMKIDSKTPECRKFLSKLMDQLEALKKQLGDNEAVTQEIVGCAHLENYALKMFLYADNEDRAGRFHKNMIKSFYTASLLIDVITVFGELTDENVKHRKYARWKATYIHNCLKNGETPQAGPVGIEEENDVEENEDVGATSLPTQPPQPSSSSAYDPSNLAPGSYSGIQIPPGAHAPANTPAEVPHSTGVTSNAVQPSPQTVPAAPAVDPDLYTASQGDIRLTPEDFARAQKYCKYAGSALQYEDVGTAVQNLQKALRLLTTGRE 309
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. UniProt/SwissProt
Match: sp|Q9SZ15|LIP5_ARATH (Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=LIP5 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.521e-30 Identity = 65/172 (37.79%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 102 MSVSNIPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRS--SSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSG-PMDNEQDI 608 MS N P + L YL+ A E++K +P+VAYYCRLY++++G+++ +S + + LM L++ L+K KK S+ HVE +AL +F+ ADK+DR G D T ++F + ++LS FG V D+E+ KYA WKA I + +K+G P G P+D++ D+ Sbjct: 1 MSNPNEPARA--LLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNSILMSLINQLEKDKK------SLTLSPDDNMHVEGFALSVFAKADKQDRAGRADLGTAKTFYAASIFFEILSQFGPVPPDIEQKHKYAAWKAADIRKAIKEGRKPTPGDPVDDDTDL 164
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. TrEMBL
Match: M4A3J8 (Vesicle (multivesicular body) trafficking 1 OS=Xiphophorus maculatus OX=8083 PE=4 SV=2) HSP 1 Score: 248.825 bits (634), Expect = 4.851e-78 Identity = 128/270 (47.41%), Postives = 170/270 (62.96%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGG-HLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +P +L+ + +L+TA E EKRDPVV YYCRLY++Q GM+LD + E ++FL++LMD L+ KKEL +N+SI E VG AH+E+YALKLF +AD +DR F I+SF S LMDVLSVFG++ ++ + RKYA+WKA YI CLK GE PQSGP+ ++D V+ T P T PP N +P + + + P +GG LSPEDFT+A+K CKYA SALQY+D TAI L K L LL +GK+ Sbjct: 3 LPAQLRAIQHHLRTAQEHEKRDPVVTYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLETMKKELNENDSITQEVVGNAHIENYALKLFLYADNEDRAERFHKNMIKSFYTSSLLMDVLSVFGELSDENIQHRKYARWKATYIHNCLKNGETPQSGPIGMDEDEEAVSNLTQPSPTGPPASNYNNIQIPPG----------------AHAPANTPAELPPPSGGVQLSPEDFTKAQKYCKYAGSALQYEDVSTAIQNLQKALKLLTTGKE 256
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. TrEMBL
Match: A0A2I4C058 (vacuolar protein sorting-associated protein VTA1 homolog isoform X2 OS=Austrofundulus limnaeus OX=52670 GN=vta1 PE=4 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 5.942e-76 Identity = 138/290 (47.59%), Postives = 177/290 (61.03%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPM----DNEQDISGVNFPTVP----------------QATQP-PEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +P +L+P+ YL+TA E E RDPVV+YYCRLY++Q GM+LD + E ++FL++LMD L+ KKEL DNESI E VG AH+E+YALKLF +AD +DR G F I+SF S LMDVLSVFG++ E+ + RKYA+WKA YI CLK GE PQ GP+ D E D G +VP Q++ P P P P S AT+ N + PA + PS G L+PEDFT+A+K CKYA SALQY+D TA+ L K L LL +GK+ Sbjct: 3 LPAQLRPIQHYLRTAQEHENRDPVVSYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLESMKKELSDNESITQEVVGNAHIENYALKLFLYADNEDRAGRFHKNMIKSFYSSSLLMDVLSVFGELSEENIQHRKYARWKATYIHNCLKNGETPQPGPIAMEGDEEADEFGAEGFSVPGPSHGGSFRADPHSEDQSSAPGPAPGIGFASGPGSVPTGPPATNYNNIQIPPGAHAPANTPAEPSGGVQLTPEDFTRAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGKE 292
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. TrEMBL
Match: A0A3Q1H8C5 (Vesicle (multivesicular body) trafficking 1 OS=Anabas testudineus OX=64144 PE=4 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 6.525e-75 Identity = 135/298 (45.30%), Postives = 182/298 (61.07%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQD----------ISGVNF---------PTVP------QATQP-PEPMGNPTPLPRSQKXX--XXXXXXXXXXXXXXXXXXXESSVAPSTGG-HLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +P +L+ + YL+TA E EKRDPVVAYYCRLY++Q GM+LD + E ++FL++LMD L+ KKEL DNESI E VG AH+E+YALK+F +AD +DR G F I+SF S L+DVLSVFG++ E+ + RKYA+WKA YI CLK GE PQ+GP+ ++D SG F PT+ ++ P P P TP P S + ++ G + + + P TGG HL+PE+FT+A+K CKYA SALQY+D TA+ L K L LL +GK+ Sbjct: 3 LPAQLRSIQHYLRTAQEHEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLESMKKELNDNESITQEVVGNAHIENYALKMFLYADNEDRGGRFHKNMIKSFYTSSLLLDVLSVFGELSEENFQHRKYARWKATYIHNCLKNGETPQAGPIGMDEDEEADEFGAEGFSGAGFSHGGSFRQDPTLQSHEDEDKSLGPGPAPGIGFTPGPASGPSVPPTTNYNNIHIPPGAHAPANTPAELPPPTGGVHLTPEEFTKAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGKE 300
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. TrEMBL
Match: A0A3Q3XC17 (Vesicle (multivesicular body) trafficking 1 OS=Mola mola OX=94237 PE=4 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 8.440e-75 Identity = 132/299 (44.15%), Postives = 169/299 (56.52%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPT-----------------------------VPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGG-HLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +P +LK + +L+TA E E+RDPVVAYYCRLY++Q GM+LD + E ++FL++LMD L+ K +L DNESI E VG AH+E+YALK+F +AD +DR G F I+SF + L++VLSVFG++ E+ + RKYA+WKA YI CLK GE PQ+GPM +QD PT P PP P PLPRS VA GG LSPEDFT+A+K CKYA SALQY+D TAI L K L LL +GK+ Sbjct: 3 VPPQLKAIQHHLRTAQEHEQRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLESMKDDLADNESISQEVVGNAHIENYALKMFLYADNEDRAGRFHKNMIKSFYSASLLLEVLSVFGELSEENIQHRKYARWKATYIHNCLKNGETPQAGPMGMDQDGEAGTKPTRHGSGPEGPPTTTNYNNIHIPPGAHAPANTPAEVLPPAAAVKPVPLPRSVPTVDPTLL-----------------VAQQQGGVQLSPEDFTKAQKFCKYAGSALQYEDVSTAIQNLQKALKLLTTGKE 284
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. TrEMBL
Match: A0A3P9I7B4 (Uncharacterized protein OS=Oryzias latipes OX=8090 PE=4 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 9.702e-75 Identity = 127/270 (47.04%), Postives = 165/270 (61.11%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGG-HLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +P L+ + YL+TA E EKRDPVVAYYCRLY++Q GM+LD + E ++FL++LMD L+ KKE DNESI E VG AH+E+YALKLF +AD +DR F I+SF S L+DVLSVFG++ E+ K RKYA+WKA YI CLK GE PQ GP+ ++D P P++ PP N +P + + + P GG LS +DFT+A+K CKYA SALQY+D TAI L K L LL +GK+ Sbjct: 3 LPAPLRSIQHYLRTAQEHEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLETMKKEFSDNESITQEVVGNAHIENYALKLFLYADNEDRAERFHKNMIKSFFTSSLLLDVLSVFGELSEENVKHRKYARWKATYIHNCLKNGETPQPGPIGMDEDEEAGGNPVQPES--PPSTNYNNIQIPPG----------------AHAPANTPADLPPPAGGLQLSADDFTKAQKYCKYAGSALQYEDVGTAIQNLQKALKLLTTGKE 254
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Cavefish
Match: vta1 (vesicle trafficking 1 [Source:NCBI gene;Acc:103046965]) HSP 1 Score: 226.098 bits (575), Expect = 6.781e-72 Identity = 125/304 (41.12%), Postives = 168/304 (55.26%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDI---------SGVNF---------------PTVPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGGHL-----------SPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +P +LK + +++TA E EKRDPVVAYYCRLY +Q GM+LD + E ++FLM+LMD L+ KK+L DN+SI E VG AH+E+YALK+F +AD +DR G F I+SF + L+DVLSVFG++ E+ + RKYA+WKA YI CLK GE PQ+GP+ E + G +F P P P P N +P + + G P+ L +PEDFT+A+K CKYA SALQY+D TA+ L K L LL +GK+ Sbjct: 3 VPAQLKAVQHHIRTAQEHEKRDPVVAYYCRLYGMQTGMKLDSKTPECRKFLMKLMDQLEMMKKDLSDNDSITQELVGHAHIENYALKMFLYADNEDRSGRFHKNMIKSFYTASLLLDVLSVFGELSEENIQHRKYARWKATYIHNCLKNGEAPQAGPIGMEGETYDDEFGAEGGGTSFDPQGPPPSQPSFHSGPAEPGHASVPPPNYNTIQIPPGSHAPANTPADLPRPTGEPVKPVPVPRTMPAVDPSLINTNQEGDVRLTPEDFTRAQKYCKYAGSALQYEDVSTAVQNLQKALKLLTTGKE 306
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Yeast
Match: VTA1 (Multivesicular body (MVB) protein; involved in endosomal protein sorting; regulates Vps4p activity by promoting its oligomerization; has an N-terminal Vps60- and Did2- binding domain, a linker region, and a C-terminal Vps4p binding domain [Source:SGD;Acc:S000004171]) HSP 1 Score: 44.669 bits (104), Expect = 9.335e-6 Identity = 23/34 (67.65%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 813 QAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVS 914 Q +KL KYA SAL Y+D PTA D LTK LDLL S Sbjct: 296 QIQKLAKYAISALNYEDLPTAKDELTKALDLLNS 329
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Nematostella
Match: EDO44702 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RV00]) HSP 1 Score: 196.823 bits (499), Expect = 2.603e-61 Identity = 113/284 (39.79%), Postives = 157/284 (55.28%), Query Frame = 3 Query: 108 VSNIPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNF----------------PTVPQATQPPE-PMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLL 908 +++P LKP+ YLK A E EKRD +VAYYC L++VQKG++LD S + K+FL LMD L+KTKKEL ++I S+ VGQAH+++ A +LF +AD +DR F+ I+SF + + D L+ FG++ ++ +KY+KWKA YI++CLK+G P GP E+D G F + QPP G TP P+ Q + AP G S ED +A K C++A SALQY+D PTAID L K L +L Sbjct: 2 AADVPPSLKPIQPYLKVAKEYEKRDRIVAYYCNLFAVQKGIKLDSKSPDGKKFLFTLMDKLEKTKKELAGEDAITSDIVGQAHMDEQARQLFLWADTEDRAARFNKNVIKSFYTASLIYDTLAQFGELTDEAAMRQKYSKWKATYINKCLKEGATPTPGPPGGEEDEFGGYFDGDASGASASGEGPSNQSTSSGDQPPAWNAGGDTP-PQPQ-----------------VPSSTPPKPAPRESGATSQEDMDKALKFCRFATSALQYEDVPTAIDNLQKALKVL 267
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Medaka
Match: vta1 (vesicle trafficking 1 [Source:NCBI gene;Acc:101157176]) HSP 1 Score: 240.35 bits (612), Expect = 3.652e-78 Identity = 127/270 (47.04%), Postives = 165/270 (61.11%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGG-HLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 +P L+ + YL+TA E EKRDPVVAYYCRLY++Q GM+LD + E ++FL++LMD L+ KKE DNESI E VG AH+E+YALKLF +AD +DR F I+SF S L+DVLSVFG++ E+ K RKYA+WKA YI CLK GE PQ GP+ ++D P P++ PP N +P + + + P GG LS +DFT+A+K CKYA SALQY+D TAI L K L LL +GK+ Sbjct: 3 LPAPLRSIQHYLRTAQEHEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLETMKKEFSDNESITQEVVGNAHIENYALKLFLYADNEDRAERFHKNMIKSFFTSSLLLDVLSVFGELSEENVKHRKYARWKATYIHNCLKNGETPQPGPIGMDEDEEAGGNPVQPES--PPSTNYNNIQIPPG----------------AHAPANTPADLPPPAGGLQLSADDFTKAQKYCKYAGSALQYEDVGTAIQNLQKALKLLTTGKE 254
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Medaka
Match: vta1 (vesicle trafficking 1 [Source:NCBI gene;Acc:101157176]) HSP 1 Score: 198.749 bits (504), Expect = 5.486e-61 Identity = 91/163 (55.83%), Postives = 117/163 (71.78%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQD 605 +P L+ + YL+TA E EKRDPVVAYYCRLY++Q GM+LD + E ++FL++LMD L+ KKE DNESI E VG AH+E+YALKLF +AD +DR F I+SF S L+DVLSVFG++ E+ K RKYA+WKA YI CLK GE PQ GP+ ++D Sbjct: 3 LPAPLRSIQHYLRTAQEHEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLETMKKEFSDNESITQEVVGNAHIENYALKLFLYADNEDRAERFHKNMIKSFFTSSLLLDVLSVFGELSEENVKHRKYARWKATYIHNCLKNGETPQPGPIGMDED 165 HSP 2 Score: 58.9214 bits (141), Expect = 1.609e-9 Identity = 44/124 (35.48%), Postives = 54/124 (43.55%), Query Frame = 3 Query: 564 GEIPQSGPMDNEQDIS---GVNFP-TVPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKK 923 G +P P N +I G + P P PP P P PRS S+ G LS +DFT+A+K CKYA SALQY+D TAI L K L LL +GK+ Sbjct: 213 GSVPSGPPSTNYNNIQIPPGAHAPANTPADLPPPAEAAKPMPAPRSVPAVDPTLL---------------SAQQQPGGLQLSADDFTKAQKYCKYAGSALQYEDVGTAIQNLQKALKLLTTGKE 321
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Medaka
Match: vta1 (vesicle trafficking 1 [Source:NCBI gene;Acc:101157176]) HSP 1 Score: 198.749 bits (504), Expect = 8.447e-61 Identity = 91/163 (55.83%), Postives = 117/163 (71.78%), Query Frame = 3 Query: 117 IPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQD 605 +P L+ + YL+TA E EKRDPVVAYYCRLY++Q GM+LD + E ++FL++LMD L+ KKE DNESI E VG AH+E+YALKLF +AD +DR F I+SF S L+DVLSVFG++ E+ K RKYA+WKA YI CLK GE PQ GP+ ++D Sbjct: 3 LPAPLRSIQHYLRTAQEHEKRDPVVAYYCRLYAMQTGMKLDSKTPECRKFLVKLMDQLETMKKEFSDNESITQEVVGNAHIENYALKLFLYADNEDRAERFHKNMIKSFFTSSLLLDVLSVFGELSEENVKHRKYARWKATYIHNCLKNGETPQPGPIGMDED 165
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Planmine SMEST
Match: SMESG000017746.1 (SMESG000017746.1) HSP 1 Score: 518.079 bits (1333), Expect = 0.000e+0 Identity = 274/275 (99.64%), Postives = 275/275 (100.00%), Query Frame = 3 Query: 102 MSVSNIPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALKLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQATQPPEPMGNPTPLPRSQKXXXXXXXXXXXXXXXXXXXXXESSVAPSTGGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKKR 926 MSVSNIPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYAL+LFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQATQPPEPMGNPTPLPRSQKPASGATSSNASGGGGISANPAESSVAPSTGGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKKR Sbjct: 1 MSVSNIPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSESKRFLMELMDNLDKTKKELKDNESIISETVGQAHVEDYALRLFSFADKKDREGDFDPATIRSFTISGFLMDVLSVFGDVGEDVEKCRKYAKWKAVYISQCLKKGEIPQSGPMDNEQDISGVNFPTVPQATQPPEPMGNPTPLPRSQKPASGATSSNASGGGGISANPAESSVAPSTGGHLSPEDFTQAEKLCKYAASALQYQDSPTAIDYLTKCLDLLVSGKKR 275 The following BLAST results are available for this feature:
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 4
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of Vacuolar protein sorting-associated protein VTA1 homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30031375 ID=SMED30031375|Name=Vacuolar protein sorting-associated protein VTA1 homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=1016bpback to top protein sequence of SMED30031375-orf-1 >SMED30031375-orf-1 ID=SMED30031375-orf-1|Name=SMED30031375-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=276bp MSVSNIPVKLKPLTSYLKTAIEIEKRDPVVAYYCRLYSVQKGMELDRSSSback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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