Protocadherin 1
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30031313 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 277.715 bits (709), Expect = 1.110e-77 Identity = 261/865 (30.17%), Postives = 416/865 (48.09%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNND-----IPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP--TSSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP-FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDL-------------TKTKGQPNLLI-DSSGMSENIIIALITFLL--FMIMVTIFIIFLLRRKSRNNLK-PRKESQN 2490
+I ++L + S + + Y I+EE+P +IG L D IP T + ++++ I + + RIDRE +C +CF ++V + + R+V IR I+D+ND++P + + E S+ ++P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P +F+ T+I IPE PV + V +L +DAD G+N + FSFS ++IA+ F + +I +++ LD E + K+++ AS G + + V + ++D ND P I + N ++ EN PL+T +ALI +DKD + VTC TD+ L P +N+F L TA LD E K I+++ D+ S + + + D NDN+P F+ + + +SI EN G K V A+D DSG N + Y + P F++D RTG++ +LDRE ++ Y F I+A D+G P L+S VT V + D+NDN + + Y F V EN P + VG + TD D +L + ++ F ID TGVI DRE Q Y F A D S+S+ V I V DVNDN PVF +P S+ + + G + +++A D D +A ++YS+V LF++D++TG + L D D + + ++A D+G P + F +N+ N + T+ PN I D S + + + L+ + ++V IFI ++R + +LK +K QN
Sbjct: 8 YIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP-----VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDRE---ETPNHKLLVL--ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI-VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDH---EIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTK-VSAMDADSGPNAKINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCD---VTDLGLHRVLVKANDLGQPD--SLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQN 851
BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 278.485 bits (711), Expect = 4.144e-77 Identity = 262/866 (30.25%), Postives = 417/866 (48.15%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNND-----IPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP--TSSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDL-------------TKTKGQPNLLI-DSSGMSENIIIALITFLL--FMIMVTIFIIFLLRRKSRNNLK-PRKESQN 2490
+I ++L + S + + Y I+EE+P +IG L D IP T + ++++ I + + RIDRE +C +CF ++V + + R+V IR I+D+ND++P + + E S+ ++P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P +F+ T+I IPE PV + V +L +DAD G+N + FSFS ++IA+ F + +I +++ LD E + K+++ AS G + + V + ++D ND P I + N ++ EN PL+T +ALI +DKD + VTC TD+ L P +N+F L TA LD E K I+++ D+ S + + + D NDN+P F+ + + +SI EN G K V A+D DSG N + Y + D P F++D RTG++ +LDRE ++ Y F I+A D+G P L+S VT V + D+NDN + + Y F V EN P + VG + TD D +L + ++ F ID TGVI DRE Q Y F A D S+S+ V I V DVNDN PVF +P S+ + + G + +++A D D +A ++YS+V LF++D++TG + L D D + + ++A D+G P + F +N+ N + T+ PN I D S + + + L+ + ++V IFI ++R + +LK +K QN
Sbjct: 8 YIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP-----VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDRE---ETPNHKLLVL--ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI-VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDH---EIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTK-VSAMDADSGPNAKINYLL-GPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCD---VTDLGLHRVLVKANDLGQPD--SLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQN 851
BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 278.485 bits (711), Expect = 4.332e-77 Identity = 262/866 (30.25%), Postives = 417/866 (48.15%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNND-----IPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP--TSSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDL-------------TKTKGQPNLLI-DSSGMSENIIIALITFLL--FMIMVTIFIIFLLRRKSRNNLK-PRKESQN 2490
+I ++L + S + + Y I+EE+P +IG L D IP T + ++++ I + + RIDRE +C +CF ++V + + R+V IR I+D+ND++P + + E S+ ++P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P +F+ T+I IPE PV + V +L +DAD G+N + FSFS ++IA+ F + +I +++ LD E + K+++ AS G + + V + ++D ND P I + N ++ EN PL+T +ALI +DKD + VTC TD+ L P +N+F L TA LD E K I+++ D+ S + + + D NDN+P F+ + + +SI EN G K V A+D DSG N + Y + D P F++D RTG++ +LDRE ++ Y F I+A D+G P L+S VT V + D+NDN + + Y F V EN P + VG + TD D +L + ++ F ID TGVI DRE Q Y F A D S+S+ V I V DVNDN PVF +P S+ + + G + +++A D D +A ++YS+V LF++D++TG + L D D + + ++A D+G P + F +N+ N + T+ PN I D S + + + L+ + ++V IFI ++R + +LK +K QN
Sbjct: 8 YIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP-----VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDRE---ETPNHKLLVL--ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI-VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDH---EIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTK-VSAMDADSGPNAKINYLL-GPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCD---VTDLGLHRVLVKANDLGQPD--SLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQN 851
BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 278.485 bits (711), Expect = 4.362e-77 Identity = 262/866 (30.25%), Postives = 417/866 (48.15%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNND-----IPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP--TSSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDL-------------TKTKGQPNLLI-DSSGMSENIIIALITFLL--FMIMVTIFIIFLLRRKSRNNLK-PRKESQN 2490
+I ++L + S + + Y I+EE+P +IG L D IP T + ++++ I + + RIDRE +C +CF ++V + + R+V IR I+D+ND++P + + E S+ ++P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P +F+ T+I IPE PV + V +L +DAD G+N + FSFS ++IA+ F + +I +++ LD E + K+++ AS G + + V + ++D ND P I + N ++ EN PL+T +ALI +DKD + VTC TD+ L P +N+F L TA LD E K I+++ D+ S + + + D NDN+P F+ + + +SI EN G K V A+D DSG N + Y + D P F++D RTG++ +LDRE ++ Y F I+A D+G P L+S VT V + D+NDN + + Y F V EN P + VG + TD D +L + ++ F ID TGVI DRE Q Y F A D S+S+ V I V DVNDN PVF +P S+ + + G + +++A D D +A ++YS+V LF++D++TG + L D D + + ++A D+G P + F +N+ N + T+ PN I D S + + + L+ + ++V IFI ++R + +LK +K QN
Sbjct: 8 YIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP-----VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDRE---ETPNHKLLVL--ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI-VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDH---EIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTK-VSAMDADSGPNAKINYLL-GPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCD---VTDLGLHRVLVKANDLGQPD--SLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQN 851
BLAST of Protocadherin 1 vs. Ensembl Human
Match: PCDH11X (protocadherin 11 X-linked [Source:HGNC Symbol;Acc:HGNC:8656]) HSP 1 Score: 278.1 bits (710), Expect = 7.734e-77 Identity = 262/866 (30.25%), Postives = 417/866 (48.15%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNND-----IPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP--TSSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDL-------------TKTKGQPNLLI-DSSGMSENIIIALITFLL--FMIMVTIFIIFLLRRKSRNNLK-PRKESQN 2490
+I ++L + S + + Y I+EE+P +IG L D IP T + ++++ I + + RIDRE +C +CF ++V + + R+V IR I+D+ND++P + + E S+ ++P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P +F+ T+I IPE PV + V +L +DAD G+N + FSFS ++IA+ F + +I +++ LD E + K+++ AS G + + V + ++D ND P I + N ++ EN PL+T +ALI +DKD + VTC TD+ L P +N+F L TA LD E K I+++ D+ S + + + D NDN+P F+ + + +SI EN G K V A+D DSG N + Y + D P F++D RTG++ +LDRE ++ Y F I+A D+G P L+S VT V + D+NDN + + Y F V EN P + VG + TD D +L + ++ F ID TGVI DRE Q Y F A D S+S+ V I V DVNDN PVF +P S+ + + G + +++A D D +A ++YS+V LF++D++TG + L D D + + ++A D+G P + F +N+ N + T+ PN I D S + + + L+ + ++V IFI ++R + +LK +K QN
Sbjct: 8 YIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP-----VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDRE---ETPNHKLLVL--ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI-VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDH---EIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTK-VSAMDADSGPNAKINYLL-GPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCD---VTDLGLHRVLVKANDLGQPD--SLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQN 851
BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 174.481 bits (441), Expect = 7.548e-44 Identity = 177/653 (27.11%), Postives = 293/653 (44.87%), Query Frame = 1
Query: 91 IKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAI-IDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVY------SIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDK---DNQTIFYSLDYVSDSGKFNID---RTTGV--IVTKSKLDREIQ-HKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFK 1995
I E + I +I + F + Y + + G+ +D + ++++ RID + T+ I + L T V + I + D+NDH+P + + E G + D D G NG IKY++E S D FI+ ++ GL ++T K LDRE + Y L + + D G PS + + V + DINDN P F + T I E MP S ++ L D D Q +Y + + D E+ + + + I ++ +DH +++ N + P + F++ I E+ P+ V ++A D D ++ + + D+ F + P++ + + + LDRE + + +D + TST I V + D+NDNSP+F+ + +I E++ GT+ QV AID D G NG V Y S P+ + F +D +G +R +LDRE + I A D G+P LS+ + + D NDN E Y+ + ENSP + VG ++A D DN I + + +D+ F+I+ GV I+T+++ D E + +K+ F A+ S++ V I V DVNDN P K
Sbjct: 384 ILENITIPAVIATVKATDEDFGTNGKVHYSMAS--SSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSST---VPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED-FIIDEDSGL-IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVT--ISEEMPRGSQIITLKAVDNDEDQK---------------ITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFIDDVNSAPYFNDHP--FSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF---FRIDPSSGD----ISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSF-LQVSAIDADIGPNGIVDYFLNESSSSPSIQL-FRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQLSSTVPVRIHVSDVNDNKPALK 1001 HSP 2 Score: 167.162 bits (422), Expect = 1.810e-41 Identity = 203/760 (26.71%), Postives = 340/760 (44.74%), Query Frame = 1
Query: 79 HIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQN-FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRI-------VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL-ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD----SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP----FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDK---DNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK----LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSS----LFSLDKDTGFLYLQRSLDGAHAEDRDHYS---LDIEACDMGTPRM 2265
++ + E+ PI II + S+ Y ++ P+D QN F LD +S ++ + +DRE + ILKVT + +R+ T+ + + DV D+SP ++ + + E G+ + D D G+NG+I+Y+L E + + + +QT LDRE S +L +I++D+G P + VE+ ++D+NDN P F++ + T I E + + +V+ + +D D G NG+ +S +S + GE+ + ++D ++ +I+ SS + I + D ND P + + ++EN + V + A D+D + + + S D+ K T ++LDRE R +++ D S+N TST I V + D+NDN+P F +++I E M G+ +KA+D D + + Y I D I + ++ L R+ + + I A+D G L V +DD N P P+ K+ E+SP PV + A D DN I YS+D S F ID ++G I S LDRE + + A+D LN+++ I +I ++D+NDN P F SS + ++S G S ++ A D D + + Y +NE SS LF LD+ +G L + L DR+ ++ L I A D GTP +
Sbjct: 170 YVKELPEDTPIETIIASVK---ASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKH-------ILKVTAY--ERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVT--ILENITIPAVIATVKATDEDFGTNGKVHYSM--ASSSGIGGLTIDYSTGEVTLRERIDAKNS----PITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLI-------AAQKMITLEENVAIGEEVGRVYAIDEDSGPNGII-----KYSMEGSEDFIIDEDSGLIK--TTKLLDRETTARYSLKVTARDMGTPSLN--TSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQI-ITLKAVDNDEDQK--ITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKV-RVEISATDQGG--LQGRCVVNVFIDDVNSAPY-FNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSID---SSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVI-LDDINDNSPQF---TSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDY-FLNESSSSPSIQLFRLDRTSGTLRVSSKL------DREQFAVIVLPIFARDRGTPSL 872 HSP 3 Score: 138.658 bits (348), Expect = 1.077e-32 Identity = 156/578 (26.99%), Postives = 263/578 (45.50%), Query Frame = 1
Query: 559 LQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNI--TVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRT--TGVIVTKSKLDREIQHKYQFRAFATDKLN-SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
++ K +DRE + L + + +R P+ S V V +LD+ DN+P F + I E P+ + VL + D D+G+NGE +S E + + G I LD E+ + VI D + +R S + VEI + D ND P S++ I EN + +A ++A+D+DF + V ++ A S + + VT R I I D S+ + T+++ D+ND++P ++++EN+ G + V AID+DSG NG + YS+ + F ID +G+I++ LDRE Y + A D G+P L+++ T V + D NDN + Y + E P + + + A D D +Q I Y ++ +D F+I G I++ S + HK + ATD+ +V +F++DVN P P S+ + G+ + + AED D ++ARI YS+ + ++ F +D +G + + LD EDR +S+ + A D +P + T+
Sbjct: 222 IRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGE--IREDAPIGTTVLSVFARDLDSGENGEIEYSLG--EGNGKNLLAINAKSGVIQTAAPLDRET-LSLIRLDVIASDKGTP--KRESTAMVEITVVDVNDNAPVFA-------SDSYNVTILENITIPAVIATVKATDEDFGTNGKV-----HYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGR-VYAIDEDSGPNGIIKYSMEGSE-DFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEE-ADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFIDDVNSAPYFNDHP----FSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF---FRIDPSSGDISVSSDLD---REDRATFSVIVTASDHASPPLNTS 767 HSP 4 Score: 107.071 bits (266), Expect = 4.593e-23 Identity = 171/609 (28.08%), Postives = 273/609 (44.83%), Query Frame = 1
Query: 199 KGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLH--GTDRI---VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTD---TFILVQEHGLYLQTLKQLDRE-HKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVII--KDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTID---SRTGVIR--SKDRLDREVK-NLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVI----ATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASS 1944
+G ++FI+D S + +DRE S LKVT GT + TI + + D+ND++P + ++ V +E GS+ + D D ++ +I Y +E + + + + + G L +L R+ HK ++ I +TD+G GR V V I D+N + P F+ F + IPE P+ V+ L D D G N +S ++ +F + P G+I V LD E + F VI+ DHAS ++ +++E+I+ D ND PQ S + A I E+ P+ TS + A D D + V + + S+ L D L + LDRE I + I D + + ++ IT+ + DVNDN+P F + I EN G+T V A D D G N + + I A F I+ + GV+R ++ D E K N + F + AS S +LSSTV +HV D NDN ++ +F + N N + R I A D D N T+ Y ++ ++ ++ TG I+ K + R + F+ +D N+ S
Sbjct: 519 EGSEDFIIDEDSGLIKTTKLLDRETTARYS-------LKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHK--VRVEISATDQG--GLQGRCVVNVFIDDVN-SAPYFNDHPF--SVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQ------FFRIDPSSGDISVSSDLDRED---RATFSVIVTASDHASP--PLNTSTQIEVILDDINDNSPQF-------TSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRL-DRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIV-ARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQAS---SGQLSSTVPVRIHVSDVNDNKPALK----DFVILMNRFDNVQMARQIGFIPAFDPDQNATLEY---FLEENDLIEAEKYTGKILVKQEWKRNMD--VSFKTCVSDGANTECS 1079
BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 174.096 bits (440), Expect = 9.812e-44 Identity = 177/658 (26.90%), Postives = 291/658 (44.22%), Query Frame = 1
Query: 91 IKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXN------DEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVN--HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVY------SIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDK---DNQTIFYSLDYVSDSGKFNIDRTT---GV--IVTKSKLDREIQ-HKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFK 1995
I E + I +I + F + Y + + G+ +D + ++++ RID + T+ I + L T V + I + D+NDH+P + + E G + D D G NG IKY++E S D FI+ ++ GL ++T K LDRE + Y L + + D G PS + + V + DINDN P F + T I E MP S ++ L D D Q +Y + + D E+ + + + I ++ +DH +++ N + P +P I E+ P+ V ++A D D ++ + + D+ F + P++ + + + LDRE + + +D + TST I V + D+NDNSP+F+ + +I E++ GT+ QV AID D G NG V Y S P+ + F +D +G +R +LDRE + I A D G+P LS+ + + D NDN E Y+ + ENSP + VG ++A D DN I + + +D+ F+I+ GV I+T+++ D E + +K+ F A+ S++ V I V DVNDN P K
Sbjct: 25 ILENITIPAVIATVKATDEDFGTNGKVHYSMAS--SSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSST---VPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED-FIIDEDSGL-IKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVT--ISEEMPRGSQIITLKAVDNDEDQK---------------ITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFIDDVNSAPYFNDHPFSVK-------IPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQF---FRIDPSSGD----ISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSF-LQVSAIDADIGPNGIVDYFLNESSSSPSIQL-FRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQASSGQLSSTVPVRIHVSDVNDNKPALK 642 HSP 2 Score: 117.087 bits (292), Expect = 4.283e-26 Identity = 110/402 (27.36%), Postives = 186/402 (46.27%), Query Frame = 1
Query: 1087 IDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNI--TVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRT--TGVIVTKSKLDREIQHKYQFRAFATDKLN-SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
I EN + +A ++A+D+DF + V ++ A S + + VT R I I D S+ + T+++ D+ND++P ++++EN+ G + V AID+DSG NG + YS+ + F ID +G+I++ LDRE Y + A D G+P L+++ T V + D NDN + Y + E P + + + A D D +Q I Y ++ +D F+I G I++ S + HK + ATD+ +V +F++DVN P P S+ + G+ + + AED D ++ARI YS+ S F +D +G + + LD EDR +S+ + A D +P + T+
Sbjct: 25 ILENITIPAVIATVKATDEDFGTNGKV-----HYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGR-VYAIDEDSGPNGIIKYSMEGSE-DFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEE-ADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFIDDVNSAPYFNDHP----FSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI---DSSQFFRIDPSSGDISVSSDLD---REDRATFSVIVTASDHASPPLNTS 408 HSP 3 Score: 106.686 bits (265), Expect = 5.769e-23 Identity = 173/619 (27.95%), Postives = 277/619 (44.75%), Query Frame = 1
Query: 199 KGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLH--GTDRI---VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTD---TFILVQEHGLYLQTLKQLDRE-HKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVII--KDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTID---SRTGVIR--SKDRLDREVK-NLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVI----ATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASS---IVMIFVE 1965
+G ++FI+D S + +DRE S LKVT GT + TI + + D+ND++P + ++ V +E GS+ + D D ++ +I Y +E + + + + + G L +L R+ HK ++ I +TD+G GR V V I D+N + P F+ F + IPE P+ V+ L D D G N +S ++ +F + P G+I V LD E + F VI+ DHAS ++ +++E+I+ D ND PQ S + A I E+ P+ TS + A D D + V + + S+ L D L + LDRE I + I D + + ++ IT+ + DVNDN+P F + I EN G+T V A D D G N + + I A F I+ + GV+R ++ D E K N + F + AS S +LSSTV +HV D NDN ++ +F + N N + R I A D D N T+ Y ++ ++ ++ TG I+ K + R + F+ +D N+ S + + VE
Sbjct: 160 EGSEDFIIDEDSGLIKTTKLLDRETTARYS-------LKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHK--VRVEISATDQG--GLQGRCVVNVFIDDVN-SAPYFNDHPF--SVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQ------FFRIDPSSGDISVSSDLDRED---RATFSVIVTASDHASP--PLNTSTQIEVILDDINDNSPQF-------TSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRL-DRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIV-ARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQAS---SGQLSSTVPVRIHVSDVNDNKPALK----DFVILMNRFDNVQMARQIGFIPAFDPDQNATLEY---FLEENDLIEAEKYTGKILVKQEWKRNMD--VSFKTCVSDGANTECSTCRFIHVLVE 730 HSP 4 Score: 103.605 bits (257), Expect = 5.992e-22 Identity = 86/266 (32.33%), Postives = 135/266 (50.75%), Query Frame = 1
Query: 1339 ITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHD--IPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD----KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQ 2109
+ + + DVNDN+P F+ + +++I EN+ VKA D+D G NG V YS+ + TID TG + ++R+D + + +I A D P LSSTV ++V D ND+ + + ++EN VGRV A D+D N I YS++ D F ID +G+I T LDRE +Y + A D LN++++I ++ ++D+NDN P F ++ +IS + K V D D K + RI+
Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVI-ATVKATDEDFGTNGKVHYSMASSSGIGGLTIDYSTGEVTLRERIDAKNSPITA-VIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSED---FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVV-LKDINDNAPTFDKKEYNV-TISEEMPRGSQIITLKAVDNDEDQKITYRIE 260
BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 165.236 bits (417), Expect = 5.661e-41 Identity = 181/609 (29.72%), Postives = 274/609 (44.99%), Query Frame = 1
Query: 481 GDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKF--YPMRTNSET--GFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI----PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKL---NSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
G++ +I+Y+L++ D + V + K D E + Y+ T+I+T+ S++ + + + D+NDN P F + + T + E + +L ++ SD D+G GE S+ +S F + P GE+ + L +F V KD G + + + I + D++ + PQ Y +RT + G AI +S I + D+D NF D + K+ R LD ++ + + I T T + + I D NDN P+FS +++ +SI+E++ V+A DKD KNG V YSI P I ID TG + + LD E Y+ + A+D G P SS +T +HV D NDN E S Y +V ENSPP T VG+V+A DKD N I Y + + S F ID G + TK +DRE+ A DK S+++ I V DVNDNPP S+ I + ++ IVA DPD + + Y + SSLF + K G +YL+R L+ A D H L + D G PR
Sbjct: 570 GNSKRIRYSLQNQ-DEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNAN--SETSTSLISIRLKDVNDNWPIFYPNEYHLT--VREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSS-----FSINPVTGEVFAQKPL----ARGRFHLVVSAKDGG--GQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAI-GSVGAMSKVKYSIYSGDQDH-----------NFSI----------DEDTGKIYVTRYLDADVHDTVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPF-YVVQASDKDKKKNGEVRYSIISSHPGSSI--EIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRI--TNGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCL----SITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRA--QLQSSLFVV-KSNGDVYLRRQLN---ASDERHQRLSVIVSDQGVPR 1125 HSP 2 Score: 165.236 bits (417), Expect = 7.137e-41 Identity = 191/762 (25.07%), Postives = 348/762 (45.67%), Query Frame = 1
Query: 22 MFILILILFPDLM--LSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFD---PDFGDNGQIKYTLESSTDTFILV-----QEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTP--TNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDK---DNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK-LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFS--LTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
+F LI ++FP L+K + + E I IG+++ K + + Y ++ P ++ + +D S ++S +D E + F I+ V + + + I +E+DD ND++P++ K+ +E G+ ++P D P F D + + + F L ++ L QLDRE + Y+L I + D G P+K G+L +EI+D NDN P FS S R T + + + S ++ + +DAD G+N S+ T ++ + S F + G I L + H D V+ DH S S+ + ++ S + P + + +NS A + EN L + VA + + + ++++ S +L P T+ + + L+ +LDRE ++ + + IGD+NDN+P++ + IH+S+ T + A D D G+NG++ YS+ ++ +ID TG I + +D + + +F + A D GSP LS+ + + + D P E + ++ ++ E++P T + +V+A + +++ I YSL + +D +G + + D E Q YQ AT+ +++S++ I ++DVNDN P+F P N L+ +E L + A D D + Y +++E SS FS++ TG ++ Q+ L R + L + A D G
Sbjct: 11 IFSLIFLIFPTFCQCLTK-----FTVPESAQIGTRIGWISG---KREESAAPKYFVVFPDEQTSKFLKVDERSGEISTIAHLDYE------KRSKFDIVAVKVEESGETIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKF-DVHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRS--RYTASVSANISIGSHLITVQATDADIGENSRISYDIKKT-SAPSNSNFAISQSGVITTTASL-LPASTH--DVIVVASDHGSPSLSSSAVVTITVLGSTLSSP-PLDIIWLVESNS----AHLMENSTLGSIVARVSIAQQ-YRDT--------KLRLIGSSALCPQQTDQAHVYLLLLCGILDRETASEHHLKFLLEKDGQIIIEHPQLLTIGDINDNAPQWHSSQIHISLNRTQGGSRT----LTAKDPDLGQNGWIRYSVLDTEL-VSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQ--NQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNANSETSTSLISIRLKDVNDNWPIF-YP----NEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSE--SSSFSINPVTGEVFAQKPL------ARGRFHLVVSAKDGG 717 HSP 3 Score: 94.7449 bits (234), Expect = 2.863e-19 Identity = 167/683 (24.45%), Postives = 295/683 (43.19%), Query Frame = 1
Query: 259 IDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINK-HKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKY-TLESSTDTFILVQEHG-LYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNT-PRFSTSIFRPTKI--IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARM---LDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSST--VTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAE-DRDHYSLDIEACDMGTP 2259
+DREA S + II+ + T+R+ + D ND+ P + ++ E G + D D G NG+ + LE S+ + LV E G L L+ L L +K+ + D G+P +E +EI + N T + + T + I E +P + KL Q ++S E +I S F V +G I +LD E + ++ KVI G + +RV++ +++ ND P +PM + EN + + VA + A D D F ++S TPT+ N + T + LD E+ + I TD + T TN+T+ + D+NDN+P FS + ++ + +++A D D+ G + YS+ F + +G + K + Y + A+D+G P S++ V+ ++ + D P E + + F+V ENS +G + + ++++ Y + S F+ID+ G + +DRE + ++F+ +++ ++ + + V D NDN PVF S +SL A G + +I+A D D E+ R+ Y +++ ++ +L+ DTG + L D E + + +EA D G P
Sbjct: 1687 LDREA----SQEHLLIIILTDGGSRNDSCTVRVTVADQNDNKPQLDASTPSELEIAESSRVGDVLHRFRASDMDIGQNGKFSFELLEDSSGSLDLVPETGDLVLRRLSSLQ-----SWKIKLRVVDHGVPGL--YVEKNLEISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAKL--------QPELAGLTYSIVEGNI-DSAFSVDSEGVIRTNLELDREI-LERYSLKVI-----GTGSGQQIGTRVDVRVNNLNDNVPS---FPMSKPRR-----VPENLRVGSYVATVGAKDVDN------LAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATDG-SFDTFTNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDA--RGALTYSLGQGSSSIFRVAPESGALFMK--VLPPAGERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPG-FEKAEFRFEVMENSKIGLQIGNL--SGEESREFHYRIQDPEASKIFSIDK-FGRLFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVF---TSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHP 2317 HSP 4 Score: 81.6481 bits (200), Expect = 2.749e-15 Identity = 86/343 (25.07%), Postives = 153/343 (44.61%), Query Frame = 1
Query: 1225 DNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITV--DIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDY--VSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEA 2241
D ++ +D + I R+ D + ST++ V D+ D P+F + + I E+ GT K V A + G + + YS+ D T+D+ +G + + D E + YQ ++A++ S +S ++ + + D NDN I + Y V+E P P+ V A+D D+ T F + Y +S+S F+I+ TG + + L R H + + S+ + I V D + P F + S I + G ++ + A ++++YS+ + FS+D+DTG +Y+ R LD A+ D L+I+A
Sbjct: 486 DKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVK-VVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNANSETSTSLIS--IRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGT-FGEVSYHILSESSSFSINPVTGEVFAQKPLARGRFHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQF---SRSKYEIRTTEDILPGIAIGSVGA-------MSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLD---ADVHDTVLLNIQA 811 HSP 5 Score: 76.2554 bits (186), Expect = 1.376e-13 Identity = 64/251 (25.50%), Postives = 122/251 (48.61%), Query Frame = 1
Query: 220 LDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGT---DRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHA 963
+D + +LS + +D EA + N + +K T G +T+ I + DVND++P ++ + + + E + ++ D D +NGQI Y + + ++ F + ++ G + T + +DRE S ++I++ D+G+P +S + +LD+NDN P S P ++P P+ + + + D D G NG + + S F+VK +G++ + RQL+ H+ VI+ D
Sbjct: 887 IDQFTGQLSTGSLLDYEA-----TRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFGIDEKLG-NVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPP--SCLSITPI-VVPAGSPLSTAIGTIVAMDPDKGLNGSVLY-----RAQLQSSLFVVKSNGDVYLRRQLNASDERHQ-RLSVIVSDQG 1122 HSP 6 Score: 74.3294 bits (181), Expect = 5.057e-13 Identity = 81/262 (30.92%), Postives = 122/262 (46.56%), Query Frame = 1
Query: 1513 DIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDN-PVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDY--VSDSG-----KFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
D F++DS GVIR+ LDRE+ Y ++ + G ++ + V V V++ NDN P + P +V EN + V V A D DN L Y VSDS FNID+ TG I + LD E+ ++ ATD + + IFV D+NDN P F P ++ F+ KI A D D + + YS + + SS+F + ++G L++ + L A + Y + + A D G P T+
Sbjct: 1871 DSAFSVDSE-GVIRTNLELDREILERYSLKVIGTGSGQ-QIGTRVD--VRVNNLNDNVPSFPMSKPR--RVPENLRVGSYVATVGAKDVDN---LAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATDGSFDTFTNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFA--KIEAHDLDAR--GALTYS-LGQGSSSIFRVAPESGALFM-KVLPPAG----ERYLVTVTATDNGVPSFSTS 2113 HSP 7 Score: 66.6254 bits (161), Expect = 1.118e-10 Identity = 57/204 (27.94%), Postives = 100/204 (49.02%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTL-HGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESS-TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGE 813
NF +D + K+ V +D + + T +N ++ TL G + I I+D ND+ P + + ++ E + + D D NG+++Y++ SS + I + + L T LD E YKL + +TD GIP +S + + + +LD+NDN P F S + T + E P +++V K+ D D+ +NG+
Sbjct: 780 HNFSIDEDTGKIYVTRYLDAD-VHDTVLLN----IQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWY--TMEVLENSPPKTIVGKVVARDKDSLENGQ 976 HSP 8 Score: 56.9954 bits (136), Expect = 8.028e-8 Identity = 111/430 (25.81%), Postives = 182/430 (42.33%), Query Frame = 1
Query: 481 GDNGQIKYTLESS-TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPS-KSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTE--TSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXX-XXXXXXNDEYPQIK--FYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDT----VTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD-SVNHKTST-NITVDIGDVNDNSPK-FSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKE 1728
G ++KY++ S D + E + + LD + L I +T +PS +S + +V + I D NDN P+FS+S+ + I E + + + SD D +NGE +S + +SI F G++ LDYE+ + +V D LG S + I + D ND P+ + +Y M + EN P T V + A DKD E+ +T ++ FG E L + T R +DRE+ + I I+ D V ++ST + + + DVNDN P S I + + T + A+D D G NG V+Y F + S G + + +L+ + + ++ SD G P+ S + HV PV I + +++E
Sbjct: 764 GAMSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHDTVLLNIQAT---LPSGESNQTQVVIFIEDHNDNPPQFSSSLVEIS--IREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEIDQFT----GQLSTGSLLDYEA-TRNYKLRVKATD---LGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTME---------VLENSPPKTIVGKVVARDKDSLENGQIVYRITNGSEYFGIDEKLG----------NVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITPIVVPAGSPLSTAIGT---IVAMDPDKGLNGSVLYRAQLQSSLFVVKS-NGDVYLRRQLNASDERHQRLSVIVSDQGVPRKS----VVCHV------PVRISKGSADIQIQE 1147
BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 123.635 bits (309), Expect = 4.480e-28 Identity = 177/668 (26.50%), Postives = 293/668 (43.86%), Query Frame = 1
Query: 343 VTIRIEIDDVNDHSPNW-KINKHKVIFNEGEHAGSRKSIPISF------DPDFGDNGQIKYTL----ESSTDTFILVQEHGLYLQTLKQL-DREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSY--------FLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQA-SDKDFKESDTVTCTTDNFG---FAES--LSLTPTNDNNEF-KLVTARMLDREMEKRIFIRIICTDSVNHKTSTN-ITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK-------QVKAIDKDS-GKNGFVVYSIPA-----HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSST-------VTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGK--FNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPD-DKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD 2193
T+ I I+DVN++ P + K+ I E G+ K+ P + D D NG I Y+L S F++ ++ G+ + + DRE + +T+ +TDRG G + VE++DINDN+P+F + + + V + V+ + D DA N E ++S +T+ + + + + GEI +++ + ++ KF F VI D+ + S ++V + + D+ + P+ + P + + G +DEN L+ + +A S D + SD + T + G AES + NE+ ++V LD E + + TD + ST V++ DVND P+F+ ++ +I E M K VKAID DS G V Y I F ID TG I ++ DRE ++Y + ASD L V + ++D NDN E Y +VKE+ V + A D D + + G+ F + +G I K LD E +Y A+D ++A++ V I +EDVNDN P F+ + I L + A D D D++S+RI Y + + +F + K +G + L ++LD
Sbjct: 849 ATLLIGIEDVNNNKPEFPDCAKYSDIAKIME--GTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETS--VSRFEAVGTSVITVFAFDNDAAHNAEITYSLE-IDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKT--QKFIFNVIADDNG-IPEALQSSAQVTLNVLDKQQKAPKWQTSP---DCKPGIT-VDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPK--VLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALD 1502 HSP 2 Score: 111.694 bits (278), Expect = 1.710e-24 Identity = 166/647 (25.66%), Postives = 278/647 (42.97%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT--------------IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDN----------GQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLV-KPDGEIIVLRQLDYE--SGIHKFDFKVIIKD---HASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENK-PL-STSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTN----DNNEFKLVTARMLDREM--EKRIFIRIICTDSV--NHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDS-GKNGFVVYSIPAHDIPFTI-------DSRTGVIRSKDRLDRE---VKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGK-FNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNS-ASSIVMIFVEDVNDNPP 1986
++F +D ++ ++ N + DRE I+ +I+ T+ +DR V+ ++I I+DVND++P+++ K+ E E G + D D N G+I + + + + T I V+E LD E Y L +I++D + V + I D+NDN P+F + T +I E + + V+ + +DAD Q+ + S E A F + K G I +++ LD + +G+ ++F V D + +GY + +I ND P +P R F I+EN+ P+ S V + +DF + T + +G + + + D N K+ R LDRE+ E+ I + D + + N+T+ + D+NDN+P F S++E G A D D K+ Y + F + S GV+R K LD E ++ + I SD ++ ALV D ND+ I + E +V+E+ P T +GR ATD+D T + ++ SD + F ID+ G + LDRE Y A D N+ +V ++++DVNDN P
Sbjct: 1269 KHFRIDELTGEIFPNEKFDRE------KIDMYIL---TVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGT-IFVKE---------PLDFEASDQYHLVLIASD---GRHNATTNVYIHIEDVNDNAPQFEQQKY-ATTVIEEDVDIPKVLFNVHATDAD--QDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDI-----NDNSP---IFPERL-----FGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIE-YGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAV-MSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALV---DRNDHAPHIHGAT-EHRVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQD-GTLRVAHTLDREDIAVYNLIIEAYDNSNNIGRQMVAVYLQDVNDNGP 1870 HSP 3 Score: 86.6557 bits (213), Expect = 7.547e-17 Identity = 131/479 (27.35%), Postives = 203/479 (42.38%), Query Frame = 1
Query: 490 GQIKYTLES-----STDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHK---FDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEF-KL---VTARMLDREMEKRIFIRIICTD--------SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK----QVKAIDKDSGKNGFVVYSI----PAHDIPFTIDSRTGVIRSKDRL--DREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGK 1827
G I Y+LE T F + G+ + + LD + + KL + ++ +++ + I D+NDN P F+ ++ T + E +P+ +LK+T D D G N ++ S+ F + +GEI +LD + + + F V +DH SS + + I + NDE F P T+ T F + E+ T V IQA D D E T + N + ++L +++ KL V+A L E E I + +I D S H + + + I DVN+N P+F D + I + M+ T+ +V+A D DS NG +VYS+ F ID +TGV+ + DRE + + A+D G L V V D NDN E YE V T V V A D D N I YSL+ + +G+
Sbjct: 567 GPITYSLEGDTPEDETKWFRIDPSTGI-IHLTRLLDFDDPALPKLHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLY--TAQVREDIPLNQTILKVTAVDKDTGDNSRITY-------SVDNHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGE-PVSLSSSAMIHIRTENTNDE--SAVFLP--TSQYTAF--VAEDAQGGTPVIQIQARDADRDEV-TYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADL-AEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGE 1026 HSP 4 Score: 84.7297 bits (208), Expect = 2.920e-16 Identity = 172/702 (24.50%), Postives = 287/702 (40.88%), Query Frame = 1
Query: 316 VTLHGTD---RIVTIR---IEIDDVNDHSPNWKINKHKVIFNE----GEHAGSRKSIPI----SFDPDF-GDNGQIKYTL-----ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDR---GIPSKSG----RLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKE-SDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRI-----FIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENM-----DAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI-----PFTIDSRTGVIRSKDRLDREVKNLYQFII--VASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IF-YSLDYVSDSGKFNIDR-----TTGVIVTKSKLDRE---IQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
+TL TD R+ + + +E+ DVND P + ++ +E EH PI + D D G ++ Y + T F + + G K DRE Y LT+ ++DR +P +G ++V++ I D+NDN P F + + E+ V+ + D D N + + F V+ D G I V LD+E+ ++ +I D ++ + V I I D ND PQ + T +I+E+ + + + A+D D E S + + G E + + E + LDR+ + ++ I D ++ V++ D+NDNSP F + + I+EN D + Q + D + +N + Y I + + F ID TG I + LDRE+ + +FII A+D G P + V D NDN E + YE V+E +P V A D D + +F Y L SD D+ + GV+ K LD E + + +D + A + V + + D ND+ P + ++ + + G S+ + A D D ++AR + + ++ F++D+D G L + +LD ED Y+L IEA D
Sbjct: 1180 LTLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEK-FDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKY--IGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIG----AGGGRIPFGVRTDSGTIFVKEPLDFEAS-DQYHLVLIASDG-----RHNATTNVYIHIEDVNDNAPQFEQQKYAT------TVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIEL----VKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGY-IEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAP--HIHGATEHRVREDVPR--GTSIGRYTATDRDAGDTARFRINRQSDPKRQ-FTIDQD-GTLRVAHTLD---REDIAVYNLIIEAYD 1848 HSP 5 Score: 73.559 bits (179), Expect = 7.441e-13 Identity = 102/384 (26.56%), Postives = 161/384 (41.93%), Query Frame = 1
Query: 1081 AIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICT-----DSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDS--------GKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLD----REVKNLYQFIIVASDHGSPKL------SSTVTALVHVDDENDN-PVIIETSPYE--FKVKENSPPNTP--VGRVIATDKD---NQTIFYSLDYVSDSGK--FNIDRTTGVIVTKSKL--DREIQHKYQFRAFATDKLNSASSIVMIF---VEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSV 2118
A + E+ PL+ ++ + A DKD ++ +T + DN F+ N N E D+ E+ R T + V+ +S I + + ND S F + + G T Q++A D D KNG + F+ID TG+++ + + E +N ++ D GS + +S T L+ ++D N+N P + + Y K+ E + P + +V ATD D N I YSL Y + F IDR TGV+ + DRE + + ATD+ + F V D+NDN P F+ P+ S+S EA G S+ + A D D +A I YS+
Sbjct: 649 AQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHNFS-------INSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNL----FSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSY---ETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSL 1018 HSP 6 Score: 65.0846 bits (157), Expect = 3.572e-10 Identity = 78/270 (28.89%), Postives = 121/270 (44.81%), Query Frame = 1
Query: 1465 KDSGKNGFVVYSIPAHDIP------FTIDSRTGVI---RSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDK---DNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLD----REIQHKYQFRAFATDKLN----SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSS-----LFSLDKDTGFLYLQRSLDGA 2199
+D G + YS+ D P F ID TG+I R D D + L++ + A + S V + +DD NDN Y +V+E+ P N + +V A DK DN I YS+ D+ F+I+ + G I K +LD E Y+F A D S+S+++ I E+ ND VF +P S + ++ G + +I A D D E + YS +++ S LFS+D+ TG + L+ + A
Sbjct: 561 EDGRSKGPITYSLEG-DTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNR---ESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSV----DNHNFSIN-SNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVF-LPTSQYTAF-VAEDAQGGTPVIQIQARDADRDE---VTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAA 816 HSP 7 Score: 63.1586 bits (152), Expect = 1.367e-9 Identity = 131/514 (25.49%), Postives = 212/514 (41.25%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKH------------KVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLES-STDTFILVQEHGLYLQTLKQLDREHKSG---YKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQS---VVLKLTGSDAD--AGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKD------------FKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNG-FVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNT-PVGRVIATDKD 1779
+ I I+DVND++P ++ K+ KV+FN HA D D + +I Y LE D + ++ ++ +K LDR+ +G + + + D G +V+V + DINDN+P F +F I P+ S + + D D +N + + +S F + + G+I +R LD E S +F +V D R + V I ++D ND P F+ +T E ++E P+ +V A D D +ESD TTD S+ + +++ VT R + I +D H + V + D ND++P H ++E++ GT+ + A D+D+G F + FTID + G +R LDRE +Y II A D+ S + + A V++ D NDN T P +EN+P N + ATD+D
Sbjct: 1422 VYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNV--HA-------TDADQD-EKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLF--GYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVP--SREGFANVTIKVTDMNDNAP---FFE-KTRYE---GSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQR-------DGFHLGIRVSDG-RHDAEAAVHVALVDRNDHAPHIHGATEH-RVREDVPRGTSIGRYT-ATDRDAGDTARFRINRQSDPKRQFTID-QDGTLRVAHTLDREDIAVYNLIIEAYDN-SNNIGRQMVA-VYLQDVNDNGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRD 1901
BLAST of Protocadherin 1 vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 123.635 bits (309), Expect = 4.480e-28 Identity = 177/668 (26.50%), Postives = 293/668 (43.86%), Query Frame = 1
Query: 343 VTIRIEIDDVNDHSPNW-KINKHKVIFNEGEHAGSRKSIPISF------DPDFGDNGQIKYTL----ESSTDTFILVQEHGLYLQTLKQL-DREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSY--------FLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQA-SDKDFKESDTVTCTTDNFG---FAES--LSLTPTNDNNEF-KLVTARMLDREMEKRIFIRIICTDSVNHKTSTN-ITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK-------QVKAIDKDS-GKNGFVVYSIPA-----HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSST-------VTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGK--FNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPD-DKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD 2193
T+ I I+DVN++ P + K+ I E G+ K+ P + D D NG I Y+L S F++ ++ G+ + + DRE + +T+ +TDRG G + VE++DINDN+P+F + + + V + V+ + D DA N E ++S +T+ + + + + GEI +++ + ++ KF F VI D+ + S ++V + + D+ + P+ + P + + G +DEN L+ + +A S D + SD + T + G AES + NE+ ++V LD E + + TD + ST V++ DVND P+F+ ++ +I E M K VKAID DS G V Y I F ID TG I ++ DRE ++Y + ASD L V + ++D NDN E Y +VKE+ V + A D D + + G+ F + +G I K LD E +Y A+D ++A++ V I +EDVNDN P F+ + I L + A D D D++S+RI Y + + +F + K +G + L ++LD
Sbjct: 849 ATLLIGIEDVNNNKPEFPDCAKYSDIAKIME--GTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETS--VSRFEAVGTSVITVFAFDNDAAHNAEITYSLE-IDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKT--QKFIFNVIADDNG-IPEALQSSAQVTLNVLDKQQKAPKWQTSP---DCKPGIT-VDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFNKFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPK--VLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALD 1502 HSP 2 Score: 111.694 bits (278), Expect = 1.710e-24 Identity = 166/647 (25.66%), Postives = 278/647 (42.97%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT--------------IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDN----------GQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLV-KPDGEIIVLRQLDYE--SGIHKFDFKVIIKD---HASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENK-PL-STSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTN----DNNEFKLVTARMLDREM--EKRIFIRIICTDSV--NHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDS-GKNGFVVYSIPAHDIPFTI-------DSRTGVIRSKDRLDRE---VKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGK-FNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNS-ASSIVMIFVEDVNDNPP 1986
++F +D ++ ++ N + DRE I+ +I+ T+ +DR V+ ++I I+DVND++P+++ K+ E E G + D D N G+I + + + + T I V+E LD E Y L +I++D + V + I D+NDN P+F + T +I E + + V+ + +DAD Q+ + S E A F + K G I +++ LD + +G+ ++F V D + +GY + +I ND P +P R F I+EN+ P+ S V + +DF + T + +G + + + D N K+ R LDRE+ E+ I + D + + N+T+ + D+NDN+P F S++E G A D D K+ Y + F + S GV+R K LD E ++ + I SD ++ ALV D ND+ I + E +V+E+ P T +GR ATD+D T + ++ SD + F ID+ G + LDRE Y A D N+ +V ++++DVNDN P
Sbjct: 1269 KHFRIDELTGEIFPNEKFDRE------KIDMYIL---TVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGT-IFVKE---------PLDFEASDQYHLVLIASD---GRHNATTNVYIHIEDVNDNAPQFEQQKY-ATTVIEEDVDIPKVLFNVHATDAD--QDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDI-----NDNSP---IFPERL-----FGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIE-YGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAV-MSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALV---DRNDHAPHIHGAT-EHRVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQFTIDQD-GTLRVAHTLDREDIAVYNLIIEAYDNSNNIGRQMVAVYLQDVNDNGP 1870 HSP 3 Score: 86.6557 bits (213), Expect = 7.547e-17 Identity = 131/479 (27.35%), Postives = 203/479 (42.38%), Query Frame = 1
Query: 490 GQIKYTLES-----STDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHK---FDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEF-KL---VTARMLDREMEKRIFIRIICTD--------SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK----QVKAIDKDSGKNGFVVYSI----PAHDIPFTIDSRTGVIRSKDRL--DREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGK 1827
G I Y+LE T F + G+ + + LD + + KL + ++ +++ + I D+NDN P F+ ++ T + E +P+ +LK+T D D G N ++ S+ F + +GEI +LD + + + F V +DH SS + + I + NDE F P T+ T F + E+ T V IQA D D E T + N + ++L +++ KL V+A L E E I + +I D S H + + + I DVN+N P+F D + I + M+ T+ +V+A D DS NG +VYS+ F ID +TGV+ + DRE + + A+D G L V V D NDN E YE V T V V A D D N I YSL+ + +G+
Sbjct: 567 GPITYSLEGDTPEDETKWFRIDPSTGI-IHLTRLLDFDDPALPKLHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLY--TAQVREDIPLNQTILKVTAVDKDTGDNSRITY-------SVDNHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGE-PVSLSSSAMIHIRTENTNDE--SAVFLP--TSQYTAF--VAEDAQGGTPVIQIQARDADRDEV-TYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADL-AEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGE 1026 HSP 4 Score: 84.7297 bits (208), Expect = 2.920e-16 Identity = 172/702 (24.50%), Postives = 287/702 (40.88%), Query Frame = 1
Query: 316 VTLHGTD---RIVTIR---IEIDDVNDHSPNWKINKHKVIFNE----GEHAGSRKSIPI----SFDPDF-GDNGQIKYTL-----ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDR---GIPSKSG----RLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKE-SDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRI-----FIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENM-----DAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI-----PFTIDSRTGVIRSKDRLDREVKNLYQFII--VASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IF-YSLDYVSDSGKFNIDR-----TTGVIVTKSKLDRE---IQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
+TL TD R+ + + +E+ DVND P + ++ +E EH PI + D D G ++ Y + T F + + G K DRE Y LT+ ++DR +P +G ++V++ I D+NDN P F + + E+ V+ + D D N + + F V+ D G I V LD+E+ ++ +I D ++ + V I I D ND PQ + T +I+E+ + + + A+D D E S + + G E + + E + LDR+ + ++ I D ++ V++ D+NDNSP F + + I+EN D + Q + D + +N + Y I + + F ID TG I + LDRE+ + +FII A+D G P + V D NDN E + YE V+E +P V A D D + +F Y L SD D+ + GV+ K LD E + + +D + A + V + + D ND+ P + ++ + + G S+ + A D D ++AR + + ++ F++D+D G L + +LD ED Y+L IEA D
Sbjct: 1180 LTLTATDMTSRVASTKTFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEK-FDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKY--IGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIG----AGGGRIPFGVRTDSGTIFVKEPLDFEAS-DQYHLVLIASDG-----RHNATTNVYIHIEDVNDNAPQFEQQKYAT------TVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIEL----VKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGY-IEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAP--HIHGATEHRVREDVPR--GTSIGRYTATDRDAGDTARFRINRQSDPKRQ-FTIDQD-GTLRVAHTLD---REDIAVYNLIIEAYD 1848 HSP 5 Score: 73.559 bits (179), Expect = 7.441e-13 Identity = 102/384 (26.56%), Postives = 161/384 (41.93%), Query Frame = 1
Query: 1081 AIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICT-----DSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDS--------GKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLD----REVKNLYQFIIVASDHGSPKL------SSTVTALVHVDDENDN-PVIIETSPYE--FKVKENSPPNTP--VGRVIATDKD---NQTIFYSLDYVSDSGK--FNIDRTTGVIVTKSKL--DREIQHKYQFRAFATDKLNSASSIVMIF---VEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSV 2118
A + E+ PL+ ++ + A DKD ++ +T + DN F+ N N E D+ E+ R T + V+ +S I + + ND S F + + G T Q++A D D KNG + F+ID TG+++ + + E +N ++ D GS + +S T L+ ++D N+N P + + Y K+ E + P + +V ATD D N I YSL Y + F IDR TGV+ + DRE + + ATD+ + F V D+NDN P F+ P+ S+S EA G S+ + A D D +A I YS+
Sbjct: 649 AQVREDIPLNQTILKVTAVDKDTGDNSRITYSVDNHNFS-------INSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDEVTYSFMDKNGRSTQKMNL----FSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVEATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSY---ETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSL 1018 HSP 6 Score: 65.0846 bits (157), Expect = 3.572e-10 Identity = 78/270 (28.89%), Postives = 121/270 (44.81%), Query Frame = 1
Query: 1465 KDSGKNGFVVYSIPAHDIP------FTIDSRTGVI---RSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDK---DNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLD----REIQHKYQFRAFATDKLN----SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSS-----LFSLDKDTGFLYLQRSLDGA 2199
+D G + YS+ D P F ID TG+I R D D + L++ + A + S V + +DD NDN Y +V+E+ P N + +V A DK DN I YS+ D+ F+I+ + G I K +LD E Y+F A D S+S+++ I E+ ND VF +P S + ++ G + +I A D D E + YS +++ S LFS+D+ TG + L+ + A
Sbjct: 561 EDGRSKGPITYSLEG-DTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNR---ESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDTGDNSRITYSV----DNHNFSIN-SNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVF-LPTSQYTAF-VAEDAQGGTPVIQIQARDADRDE---VTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAA 816 HSP 7 Score: 63.1586 bits (152), Expect = 1.367e-9 Identity = 131/514 (25.49%), Postives = 212/514 (41.25%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKH------------KVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLES-STDTFILVQEHGLYLQTLKQLDREHKSG---YKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQS---VVLKLTGSDAD--AGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKD------------FKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNG-FVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNT-PVGRVIATDKD 1779
+ I I+DVND++P ++ K+ KV+FN HA D D + +I Y LE D + ++ ++ +K LDR+ +G + + + D G +V+V + DINDN+P F +F I P+ S + + D D +N + + +S F + + G+I +R LD E S +F +V D R + V I ++D ND P F+ +T E ++E P+ +V A D D +ESD TTD S+ + +++ VT R + I +D H + V + D ND++P H ++E++ GT+ + A D+D+G F + FTID + G +R LDRE +Y II A D+ S + + A V++ D NDN T P +EN+P N + ATD+D
Sbjct: 1422 VYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNV--HA-------TDADQD-EKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLF--GYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVP--SREGFANVTIKVTDMNDNAP---FFE-KTRYE---GSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQR-------DGFHLGIRVSDG-RHDAEAAVHVALVDRNDHAPHIHGATEH-RVREDVPRGTSIGRYT-ATDRDAGDTARFRINRQSDPKRQFTID-QDGTLRVAHTLDREDIAVYNLIIEAYDN-SNNIGRQMVA-VYLQDVNDNGPEPYTVPRPCIFRENTPVNQLGTCEIRATDRD 1901
BLAST of Protocadherin 1 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0078045) HSP 1 Score: 215.312 bits (547), Expect = 1.838e-56 Identity = 213/748 (28.48%), Postives = 350/748 (46.79%), Query Frame = 1
Query: 97 EELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQ-NFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILV----QEHGLYL--QTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESG-IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP----AHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-------NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN-SASSIVMIFVEDVNDNPPVF--KMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
E + + + IGY+ + F DS G + + GV+ + +D + ++ ++DRE + ++ + L G R + + + + D ND++P + + F E ++++ + D D +Y + S D F L ++ LYL Q LDRE GY L I + D G P G + V + I D+NDN P F+ S + T +PE V + VL++ SD DA +NG ++ + ++ + + + G I + + LD+E+ +H + V+ KDH + + V I ++D ND P I + S+ I E+ VA I D D K T N G +LT T DN+ + ++ LDRE+ + ++ TD S +I + I DVNDN P+F ++ H ++ E D GT+ QV A D+D G N + YS+ H F ID +TG+I ++ +D E + + Q +VA D G P LSST T LV + D NDN I + S Y V EN P + +V A+D D N TI ++++ F + +G I +LD E + Y+F ATD+ S ++++ + + DVNDN PVF + SL + +A+ + +VA DPD ++ Y +V + +F +D+ TG +++ R D + + L+I A D G R
Sbjct: 88 EGVAVDYQIGYIGD----FGGIDS-GPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRETRA------SYSLVAIPLSG--RNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFAT--VPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELH--ELVVVAKDHGE--QPLETTAFVSIRVTDVNDNQPTINVIFL---SDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGH-FALT-TRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSV-LQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTE---FEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRP-DMLSVRTQPMHMLNISATDGGNLR 806 HSP 2 Score: 187.963 bits (476), Expect = 7.735e-48 Identity = 191/705 (27.09%), Postives = 322/705 (45.67%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL--ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXX---------XXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARM-----LDREMEKRIFIRIICTDSVNHKTSTNITVDI--GDVNDNSPKFSD---NIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI------PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDK-------------DNQTIFYSLDYVSD---SGKFNIDRTTGVIVTKSKLDREIQHKYQF--RAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEA--AGFSLTKIVAEDPDDKESARIQYSVV---------NEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG---TPRMCTT 2274
+ IE++DVND++P ++ + ++ E G+ + D D G +GQ+ Y+L ES F + G +L + LD E + L + +TD G+PS S L + V++ D+NDN P F + + + E+ + + ++++ SD D G N + + +S +F + P+ I LR LD E+ ++ V+ D+ + + V ++ +++ND Q Y R I+EN + V ++ ASD D E+ + SL P N + + VT + LDRE+ + + + D S + V I DVNDN+P+ +D +++ S++E GT + V+A+D+D G+N + YSI H + F+ID +GVIR++ LD E +++Y+ + ASD G+P + V V D NDN +S F+V+E++ VG + ++ ++ + Y+L+ ++ F+IDR +G +V LDRE+Q +++ RA T N S++ V I V DVNDN P + + I L EA G + A D D + +QY ++ E+ SLF +D TG L LQ LD E Y L ++A D T R+ T+
Sbjct: 917 VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSG-HLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEY--SVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETR-DRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFR---------IEENLRRGSVVGVVTASDLDLGENAAI-----------RYSLLPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVV--SVREEQPPGTEVVR-VRAVDRDHGQNASITYSIVKGRDSDGHGL-FSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQ-----DPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLD---FEAVQEYLLIVQALDQSSNVTERLQTS 1585 HSP 3 Score: 160.614 bits (405), Expect = 2.144e-39 Identity = 195/720 (27.08%), Postives = 310/720 (43.06%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT---IRIEIDDVNDHSPNWKINKHKVIF--NEGEHAGSRKSIPISF-------DPDFG-DNGQIKYTLESSTDTFILV-QEHGLYLQTLK-QLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLR-QLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK----QVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTG---VIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFAT--DKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTF 2277
Q F +DP + + +N +D E T ++ +++ HG + T + I + DVND+ P IN VIF ++ S + P F DPD + + TL F L +++ +YL + LDRE S Y L++++TD+G P + + I D+NDN P F ++ + E + VL++ D D G N ++S + T + A+ +F + P +I R +D E+ V+ +D ++ V I ++N+ FY + + EN+P+ + + ASD D + V T GF + + E + A LD E ++ TD T+ I + + DVNDN P F +S++E+ A + + V A D D G G V Y I A + F ID TG V+R D L + ++ I A+D G+ + ++ + + D P I E + Y + VKE+ P T VG VIA D + YS+ G F+I+ +G I LD E + + AT + + V I VEDVNDN P F+ +S+ IS+ G L A D D S ++ YS+V E LF++D +G L L + LD E ++L + A D G P + T
Sbjct: 334 QMFRIDPRTGAIYINKALDFE----TKELHELVVVAKD-HGEQPLETTAFVSIRVTDVNDNQPT--IN---VIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHAN--VMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQ-WFQIDPQTGLITTRSHIDCETEPVP-QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVS---------VAENEPVGRCILKVSASDPDCGVNAMVNYTIGE-GFKHLTEFEVRSASGE--ICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVR-PDMLSVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFE---ASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLILSQHLD---YESSQRHTLIVTATDGGVPSLSTNL 1020 HSP 4 Score: 159.844 bits (403), Expect = 4.440e-39 Identity = 219/813 (26.94%), Postives = 350/813 (43.05%), Query Frame = 1
Query: 82 IYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEI------------LNPRDKGV--QNFILDPISSKLSVNNRIDRE----------AICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL--------ESSTDTFILVQEHGL--YLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLE----VEVEILDINDNTPRF----STSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQL-----DYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTD-NFGFAESLSLTPTNDNNEFKLVTARMLDREMEKR----IFIR------IICTDSVNHKTSTN---------------ITVDIGDVNDNSPKFSDNIIH-MSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPK-LSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD----KLNSASSIVMIFVEDVNDNPPVF-KMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSV--VNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
++R++E+ + H++G ++ P R D + LNP K + F +D S L V +DRE A+ T+S N +T++IE+ DVND++P W + + +E G+ + D D G NG ++Y L ES L + L L LD E Y L + + D+ + + RL+ V + ILD ND+ P F S+ + I + + VV + D D+G NG+ ++ T + + + G I +++ L D E G +F+ + KDH ++SS + I+ N+ P R A I EN P + V +Q + K ++ + + G A L D + T DRE + +++R + + +V + S++ I + +GDVNDNSP+F + +S+ EN + G V A D D G N ++YSI ++ F+IDS +G + ++ LDRE + Y I ASD G PK + V+D+NDN + S Y V+E++P T V ++ A D D N + YSL + +F ID +G+I T KLDRE+Q Y F ATD ++ SA+ V I V D+NDN P+F + P + + + G +L K+ A D D +A I YS+ N S+ F ++ TG L +SL +E L++ A D G P
Sbjct: 1371 VFRVREDAALGHVVGSIS---PIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNP----------QSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQS-SNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEI--TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKG-GRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNN--------PPRFLQAVYRATILENVPSGSFV--LQVTAKSLHGAENANLSYEIPAGVANDLFHV---DWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVI--HTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARP-LDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANET-QWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYP--YIGQVPALIQ--PGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSL---ASESGKLLHLEVVARDKGNP 2142 HSP 5 Score: 154.451 bits (389), Expect = 1.912e-37 Identity = 204/769 (26.53%), Postives = 341/769 (44.34%), Query Frame = 1
Query: 157 STDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRI---VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKY--------TLESSTDTFILVQEHGL-----YLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSI--FRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCT------TDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIF-IRIICTDSVN--HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTN-----KQVKAIDKDSGKNGF----VVYSIPAH-----DIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASD---HGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT----------IFYSLDYVSDSGK--FNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSA------SSIVMIFVEDVNDNPPVFKMPNSS---LNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGA--HAEDRDHYSLDIEACDMGTP 2259
S+ Y ++ KG+ F +D S L ++ +D E SS +I+ T G + +TI +++ DVND+ P ++ +++ V +E ++ + D D G+N +I Y + +S + + Q G+ ++ LDRE + Y+LT+++TD G P+ + V V +LD NDN P+F S FR I E + SVV +T SD D G+N +S P +S F V P GEI LD E +D V +D + RS+ V I +SD ND P+I + + + E +P T V ++A D+D ++ ++T + +D G S+ PT+ ++V LD E E+ I+ + + +D N +T + V++ D+NDN P F+ + + ++E+ G ++ + ++S + F V Y++ + F ID +G + LDREV++ ++ I A D +P+ SS +T + V D NDN P + +V E +P T + ATD D T F L+ + F +D TG + ++ LD E +Y A D+ ++ S V + + D ND+ P F PNSS S+ +S G + IVA D D ++ ++ Y + F ++ TG + L +SL A E ++L I A D G P
Sbjct: 962 SSGQVTYSLVKESGKGL--FAIDARSGHLILSQHLDYE-----SSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFR----IEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSS-----FQVHPVTGEISTREPLDRELR-ELYDLVVEARDQGTP--VRSARVPVRIHVSDVNDNAPEI------ADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGL---FSIDPTSGVIRTRVV----LDHE-ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQ-SSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQP 1696 HSP 6 Score: 140.969 bits (354), Expect = 2.410e-33 Identity = 199/815 (24.42%), Postives = 341/815 (41.84%), Query Frame = 1
Query: 85 YRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGT---DRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPI-SFDPDFGDNGQIKYTLESSTDTFILVQEHGLY--------LQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTS--IFRPTK------IIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXP-TETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARM------------LDREMEKRIFIRIICTDSVNH-----KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTN-------------KQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRL-----DREVKNLYQFIIVASDHGSP--KLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATD---KDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-------------KLNSASSI-------------VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
+RI+E L ++G + + Y +L P + +F + P++ ++S +DRE ++++ GT V +RI + DVND++P + V+ E + + + + D D G N I Y++ D+ HGL+ ++T LD E +S Y+L + ++D G P + + VE+LD+NDN P F++S +FR + ++ P++ + S ++ ++ +++ +P T+ I ++ + + G ++V R LD E +F ++ D + +SS V+I ++D ND P+ P+ + E P+ T + A+D D T T + + N++ E + RM LD E + + + D ++ +TS + + I D ND++P F + N G T + + A+D+DSG NG + Y I + F I+S+TG+I L D E + II A DHG P K SS L+ V ++NP + Y + EN P + V +V A +N + Y + + F++D G+I T+ + DRE Q Y + D K S+ SI + I V DVNDN P F+ P S +S+ G + +VA D D+ +A + YS+ + FS+D +G L R LD E Y+L I+A D G P+
Sbjct: 1160 FRIEENLRRGSVVGVVTASDLDLGENAAIRYSLL-PINS---SFQVHPVTGEISTREPLDRELRELYD-----LVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDS----DGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQ-SEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQ-------VSEATPVGTIIHNFTATDAD-------TGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHF--------VSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLI-VQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFR-PGSCYG-LSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELS-ARPLD---REQHSRYTLQIQASDRGQPK 1930 HSP 7 Score: 123.635 bits (309), Expect = 5.340e-28 Identity = 163/682 (23.90%), Postives = 291/682 (42.67%), Query Frame = 1
Query: 355 IEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI--IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVAL------IQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRI------FIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASD-HGSP-----KLSSTVTALVHVDDENDN-PVIIETSPYEFKVKENSPPNTPVGRVIATDKD-----NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHK-YQFRAFATDKLNSASSIVM----IFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSV----VNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFR 2280
IE++D ND+SP + + +EG + G+ + +FD D G N +++Y + + F++ ++T LDRE + YKL II+TD G+P +G + V+I+D+NDN P F P + + E + +V+ ++ +D D + T S F L + G++++ R+LDYE +++ VI D A ++ NDE + + FAI+ +S S+++ + A+D D + +++ E S+ P+N +V+ M ++ + F+RII D+ K+ST + V D +F N I E G+ V + +D+ + + + F + ++ K LDRE +LY+ +V S HG P SS ++ ++ + D NDN P+ ++ YE ++ E +P + ++ A D D N + Y + +D F ID TGV+ ++LD + K Y+ A D + + + + D NDN P F + L+ E G S+ + A D D ++ YS+ +E +F +D ++G + D E R Y +++ A DMG + R
Sbjct: 2310 IELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP-----PNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQ-QEYELDVIASDAA--------HEARTVLTVRVNDENDNAPVF-LAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPA-QEGFSVHPSN-----GVVSVNM--SRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSV----VLQLGQDALDQSLAIIA-GNEESAFELLQSKAIVLVKP-LDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVH---FLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFD---YEQRQRYDMELLASDMGGKKASVAVR 2956 HSP 8 Score: 116.701 bits (291), Expect = 6.838e-26 Identity = 102/361 (28.25%), Postives = 170/361 (47.09%), Query Frame = 1
Query: 1276 EKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTID-SRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPN--------TPVGRVIATDKDNQTIFY-SLDY---------VSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVF--KMPNSS---LNSIS-LSYKEAAGFSLTKIVAEDPD-DKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
E R+ + D+ + + +++ D NDNSPKFS ++ E + GT QV A D D+G N + Y I HD F I+ + +G++R+ LDRE++++Y+ I+A+D G P+++ T T V + D NDN + PPN T +G VI + N Y +L Y + + F +DR +G +V K +LD E+Q +Y+ A+D + A +++ + V D NDN PVF + P + L +IS +S + F L + A D D + ++++ Y + E FS+ G + + S Y + I A D G P + ++
Sbjct: 2287 EIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFV-AQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDN-------------QPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYII--EPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSS 2631 HSP 9 Score: 77.7962 bits (190), Expect = 5.504e-14 Identity = 153/598 (25.59%), Postives = 244/598 (40.80%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDF-----------GDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSG--YKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIA------KSYFLVKPDGEIIVLRQLDYESG-IHKFDFKVIIKDHA---SLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFK--LVTARM-----LDREMEKRIFIRII-CTDSVNHKTSTNIT---VDIGDVNDNSPKFS-DNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI---PAHDIP---FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKL 1875
F LD S KL + R+D E +I H ++T+R+ +D ND++P + + F A S S +S D D G+N ++ Y +E + + F + +G+ + +L S Y + II+ D G P+ + V+ D +F + +R I E P+ SVVL+L G DA + S+A +S F + I++++ LD E ++K V+ H SS V I I D ND +P + S A I E PL S+A +QA D D + + D +T ND + F LVT + LD + + + II DS + + ++ +++ D NDN PKF +H + EN G++ + A D D G G + YSI P+ + F +DS +G++ S D E + Y ++ASD G K S V + DE T + P VG+V ATD D + + Y L + F ++R++G ++ K KL
Sbjct: 2478 FALDRYSGKLVLKRRLDYEL---QQEYELDVIASDAAHEARTVLTVRV--NDENDNAPVFLAQQPPAYFAILP-AISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQ--ISEAAPLGSVVLQL-GQDA--------------LDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDLYKLRL-VLSHPHGPPLISSLNSSSGISVIITILDANDNFP------IFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYD---------ITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHF-LAENEPVGSSVFR-AHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVYQLS--APHSHFKVNRSSGAVLIKRKL 3032 HSP 10 Score: 70.4774 bits (171), Expect = 1.016e-11 Identity = 66/254 (25.98%), Postives = 120/254 (47.24%), Query Frame = 1
Query: 175 YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTI---RIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL------ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLV-KPDGEIIVLRQL 906
Y+I + D+ + F +D ++ L VNNR+D ++ + + II H + ++ R+E+ D ND+ P + + ++ E E GS + D D G GQ+ Y++ ESS F + E GL D E + Y + ++++D G K + V VEI ++ TP+F+ +R +P VV ++T +D+D+G +G + + S S+F V + G +++ R+L
Sbjct: 2792 YDITSGNDEHM--FTIDLVTGVLFVNNRLDYDSGAKSYEL---IIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFV-FDYEQRQRYDMELLASDMG--GKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVY-----QLSAPHSHFKVNRSSGAVLIKRKL 3032 HSP 11 Score: 65.855 bits (159), Expect = 2.665e-10 Identity = 125/538 (23.23%), Postives = 214/538 (39.78%), Query Frame = 1
Query: 181 ILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT---IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTII-STDRGIPSKSGRLE-----VEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMR------TNSETGFAIID------ENKPLSTSVALIQASDKDFKESDTVTCTTDNFG-FAESLSLTPTND--------NNEFKLVT-ARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKE--NMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTG--VIRSKDRLDREV-KNLY------QFIIVASDHGSPKLSSTVTALVHVD 1668
I+ P +G F + P + +SVN + R +SS + F+ + G + + +R++ +D + N+++ +E GS + + D D + + F L+Q + L +K LDRE YKL ++ S G P S V + ILD NDN P F S + I E P++ + +L DAD + T + + + G + V +LDY+SG ++ + D + + P P R ++E F + + EN+P+ +SV ASD D FG S+ P+++ ++E LVT A + D E +R + ++ +D K S + V+I ++ +P+F++ + + G QV A D DSG +G VVY + A F ++ +G +I+ K +LD + NLY +I AS LSS + +D
Sbjct: 2580 IIEPAQEG---FSVHPSNGVVSVN--MSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGS---VVLQLGQDALDQ-SLAIIAGNEESAFELLQSKAIVL--VKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAE-ISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACD--------------------SHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLD----------KGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVG-QVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGAVLIKRKLKLDGDGDGNLYMDGRDISLVISASSGRHNSLSSMAVVEIALD 3074
BLAST of Protocadherin 1 vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0343249) HSP 1 Score: 215.312 bits (547), Expect = 1.838e-56 Identity = 213/748 (28.48%), Postives = 350/748 (46.79%), Query Frame = 1
Query: 97 EELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQ-NFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILV----QEHGLYL--QTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESG-IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP----AHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-------NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN-SASSIVMIFVEDVNDNPPVF--KMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
E + + + IGY+ + F DS G + + GV+ + +D + ++ ++DRE + ++ + L G R + + + + D ND++P + + F E ++++ + D D +Y + S D F L ++ LYL Q LDRE GY L I + D G P G + V + I D+NDN P F+ S + T +PE V + VL++ SD DA +NG ++ + ++ + + + G I + + LD+E+ +H + V+ KDH + + V I ++D ND P I + S+ I E+ VA I D D K T N G +LT T DN+ + ++ LDRE+ + ++ TD S +I + I DVNDN P+F ++ H ++ E D GT+ QV A D+D G N + YS+ H F ID +TG+I ++ +D E + + Q +VA D G P LSST T LV + D NDN I + S Y V EN P + +V A+D D N TI ++++ F + +G I +LD E + Y+F ATD+ S ++++ + + DVNDN PVF + SL + +A+ + +VA DPD ++ Y +V + +F +D+ TG +++ R D + + L+I A D G R
Sbjct: 88 EGVAVDYQIGYIGD----FGGIDS-GPPYIIVAEAGVETDLAIDRATGEIRTKVKLDRETRA------SYSLVAIPLSG--RNIRVLVTVKDENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFAT--VPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELH--ELVVVAKDHGE--QPLETTAFVSIRVTDVNDNQPTINVIFL---SDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGH-FALT-TRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSV-LQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTE---FEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRP-DMLSVRTQPMHMLNISATDGGNLR 806 HSP 2 Score: 187.963 bits (476), Expect = 7.735e-48 Identity = 191/705 (27.09%), Postives = 322/705 (45.67%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL--ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXX---------XXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARM-----LDREMEKRIFIRIICTDSVNHKTSTNITVDI--GDVNDNSPKFSD---NIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI------PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDK-------------DNQTIFYSLDYVSD---SGKFNIDRTTGVIVTKSKLDREIQHKYQF--RAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEA--AGFSLTKIVAEDPDDKESARIQYSVV---------NEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG---TPRMCTT 2274
+ IE++DVND++P ++ + ++ E G+ + D D G +GQ+ Y+L ES F + G +L + LD E + L + +TD G+PS S L + V++ D+NDN P F + + + E+ + + ++++ SD D G N + + +S +F + P+ I LR LD E+ ++ V+ D+ + + V ++ +++ND Q Y R I+EN + V ++ ASD D E+ + SL P N + + VT + LDRE+ + + + D S + V I DVNDN+P+ +D +++ S++E GT + V+A+D+D G+N + YSI H + F+ID +GVIR++ LD E +++Y+ + ASD G+P + V V D NDN +S F+V+E++ VG + ++ ++ + Y+L+ ++ F+IDR +G +V LDRE+Q +++ RA T N S++ V I V DVNDN P + + I L EA G + A D D + +QY ++ E+ SLF +D TG L LQ LD E Y L ++A D T R+ T+
Sbjct: 917 VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSG-HLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEY--SVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETR-DRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFR---------IEENLRRGSVVGVVTASDLDLGENAAI-----------RYSLLPINSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVV--SVREEQPPGTEVVR-VRAVDRDHGQNASITYSIVKGRDSDGHGL-FSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQ-----DPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLD---FEAVQEYLLIVQALDQSSNVTERLQTS 1585 HSP 3 Score: 160.614 bits (405), Expect = 2.144e-39 Identity = 195/720 (27.08%), Postives = 310/720 (43.06%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT---IRIEIDDVNDHSPNWKINKHKVIF--NEGEHAGSRKSIPISF-------DPDFG-DNGQIKYTLESSTDTFILV-QEHGLYLQTLK-QLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLR-QLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK----QVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTG---VIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFAT--DKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTF 2277
Q F +DP + + +N +D E T ++ +++ HG + T + I + DVND+ P IN VIF ++ S + P F DPD + + TL F L +++ +YL + LDRE S Y L++++TD+G P + + I D+NDN P F ++ + E + VL++ D D G N ++S + T + A+ +F + P +I R +D E+ V+ +D ++ V I ++N+ FY + + EN+P+ + + ASD D + V T GF + + E + A LD E ++ TD T+ I + + DVNDN P F +S++E+ A + + V A D D G G V Y I A + F ID TG V+R D L + ++ I A+D G+ + ++ + + D P I E + Y + VKE+ P T VG VIA D + YS+ G F+I+ +G I LD E + + AT + + V I VEDVNDN P F+ +S+ IS+ G L A D D S ++ YS+V E LF++D +G L L + LD E ++L + A D G P + T
Sbjct: 334 QMFRIDPRTGAIYINKALDFE----TKELHELVVVAKD-HGEQPLETTAFVSIRVTDVNDNQPT--IN---VIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHAN--VMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQ-WFQIDPQTGLITTRSHIDCETEPVP-QLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVS---------VAENEPVGRCILKVSASDPDCGVNAMVNYTIGE-GFKHLTEFEVRSASGE--ICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVR-PDMLSVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFE---ASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLILSQHLD---YESSQRHTLIVTATDGGVPSLSTNL 1020 HSP 4 Score: 159.844 bits (403), Expect = 4.440e-39 Identity = 219/813 (26.94%), Postives = 350/813 (43.05%), Query Frame = 1
Query: 82 IYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEI------------LNPRDKGV--QNFILDPISSKLSVNNRIDRE----------AICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL--------ESSTDTFILVQEHGL--YLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLE----VEVEILDINDNTPRF----STSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQL-----DYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTD-NFGFAESLSLTPTNDNNEFKLVTARMLDREMEKR----IFIR------IICTDSVNHKTSTN---------------ITVDIGDVNDNSPKFSDNIIH-MSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPK-LSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD----KLNSASSIVMIFVEDVNDNPPVF-KMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSV--VNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
++R++E+ + H++G ++ P R D + LNP K + F +D S L V +DRE A+ T+S N +T++IE+ DVND++P W + + +E G+ + D D G NG ++Y L ES L + L L LD E Y L + + D+ + + RL+ V + ILD ND+ P F S+ + I + + VV + D D+G NG+ ++ T + + + G I +++ L D E G +F+ + KDH ++SS + I+ N+ P R A I EN P + V +Q + K ++ + + G A L D + T DRE + +++R + + +V + S++ I + +GDVNDNSP+F + +S+ EN + G V A D D G N ++YSI ++ F+IDS +G + ++ LDRE + Y I ASD G PK + V+D+NDN + S Y V+E++P T V ++ A D D N + YSL + +F ID +G+I T KLDRE+Q Y F ATD ++ SA+ V I V D+NDN P+F + P + + + G +L K+ A D D +A I YS+ N S+ F ++ TG L +SL +E L++ A D G P
Sbjct: 1371 VFRVREDAALGHVVGSIS---PIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNP----------QSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQS-SNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEI--TGGNGEGRFRINSQTGIIELVKSLPPATEDVEKG-GRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNN--------PPRFLQAVYRATILENVPSGSFV--LQVTAKSLHGAENANLSYEIPAGVANDLFHV---DWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVI--HTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARP-LDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANET-QWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYP--YIGQVPALIQ--PGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSL---ASESGKLLHLEVVARDKGNP 2142 HSP 5 Score: 154.451 bits (389), Expect = 1.912e-37 Identity = 204/769 (26.53%), Postives = 341/769 (44.34%), Query Frame = 1
Query: 157 STDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRI---VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKY--------TLESSTDTFILVQEHGL-----YLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSI--FRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCT------TDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIF-IRIICTDSVN--HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTN-----KQVKAIDKDSGKNGF----VVYSIPAH-----DIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASD---HGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT----------IFYSLDYVSDSGK--FNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSA------SSIVMIFVEDVNDNPPVFKMPNSS---LNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGA--HAEDRDHYSLDIEACDMGTP 2259
S+ Y ++ KG+ F +D S L ++ +D E SS +I+ T G + +TI +++ DVND+ P ++ +++ V +E ++ + D D G+N +I Y + +S + + Q G+ ++ LDRE + Y+LT+++TD G P+ + V V +LD NDN P+F S FR I E + SVV +T SD D G+N +S P +S F V P GEI LD E +D V +D + RS+ V I +SD ND P+I + + + E +P T V ++A D+D ++ ++T + +D G S+ PT+ ++V LD E E+ I+ + + +D N +T + V++ D+NDN P F+ + + ++E+ G ++ + ++S + F V Y++ + F ID +G + LDREV++ ++ I A D +P+ SS +T + V D NDN P + +V E +P T + ATD D T F L+ + F +D TG + ++ LD E +Y A D+ ++ S V + + D ND+ P F PNSS S+ +S G + IVA D D ++ ++ Y + F ++ TG + L +SL A E ++L I A D G P
Sbjct: 962 SSGQVTYSLVKESGKGL--FAIDARSGHLILSQHLDYE-----SSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFR----IEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSS-----FQVHPVTGEISTREPLDRELR-ELYDLVVEARDQGTP--VRSARVPVRIHVSDVNDNAPEI------ADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGL---FSIDPTSGVIRTRVV----LDHE-ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQ-SSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQP 1696 HSP 6 Score: 140.969 bits (354), Expect = 2.410e-33 Identity = 199/815 (24.42%), Postives = 341/815 (41.84%), Query Frame = 1
Query: 85 YRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGT---DRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPI-SFDPDFGDNGQIKYTLESSTDTFILVQEHGLY--------LQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTS--IFRPTK------IIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXP-TETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARM------------LDREMEKRIFIRIICTDSVNH-----KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTN-------------KQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRL-----DREVKNLYQFIIVASDHGSP--KLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATD---KDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-------------KLNSASSI-------------VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
+RI+E L ++G + + Y +L P + +F + P++ ++S +DRE ++++ GT V +RI + DVND++P + V+ E + + + + D D G N I Y++ D+ HGL+ ++T LD E +S Y+L + ++D G P + + VE+LD+NDN P F++S +FR + ++ P++ + S ++ ++ +++ +P T+ I ++ + + G ++V R LD E +F ++ D + +SS V+I ++D ND P+ P+ + E P+ T + A+D D T T + + N++ E + RM LD E + + + D ++ +TS + + I D ND++P F + N G T + + A+D+DSG NG + Y I + F I+S+TG+I L D E + II A DHG P K SS L+ V ++NP + Y + EN P + V +V A +N + Y + + F++D G+I T+ + DRE Q Y + D K S+ SI + I V DVNDN P F+ P S +S+ G + +VA D D+ +A + YS+ + FS+D +G L R LD E Y+L I+A D G P+
Sbjct: 1160 FRIEENLRRGSVVGVVTASDLDLGENAAIRYSLL-PINS---SFQVHPVTGEISTREPLDRELRELYD-----LVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDS----DGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQ-SEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQ-------VSEATPVGTIIHNFTATDAD-------TGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHF--------VSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLI-VQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFR-PGSCYG-LSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELS-ARPLD---REQHSRYTLQIQASDRGQPK 1930 HSP 7 Score: 123.635 bits (309), Expect = 5.340e-28 Identity = 163/682 (23.90%), Postives = 291/682 (42.67%), Query Frame = 1
Query: 355 IEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI--IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVAL------IQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRI------FIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASD-HGSP-----KLSSTVTALVHVDDENDN-PVIIETSPYEFKVKENSPPNTPVGRVIATDKD-----NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHK-YQFRAFATDKLNSASSIVM----IFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSV----VNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFR 2280
IE++D ND+SP + + +EG + G+ + +FD D G N +++Y + + F++ ++T LDRE + YKL II+TD G+P +G + V+I+D+NDN P F P + + E + +V+ ++ +D D + T S F L + G++++ R+LDYE +++ VI D A ++ NDE + + FAI+ +S S+++ + A+D D + +++ E S+ P+N +V+ M ++ + F+RII D+ K+ST + V D +F N I E G+ V + +D+ + + + F + ++ K LDRE +LY+ +V S HG P SS ++ ++ + D NDN P+ ++ YE ++ E +P + ++ A D D N + Y + +D F ID TGV+ ++LD + K Y+ A D + + + + D NDN P F + L+ E G S+ + A D D ++ YS+ +E +F +D ++G + D E R Y +++ A DMG + R
Sbjct: 2310 IELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP-----PNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQ-QEYELDVIASDAA--------HEARTVLTVRVNDENDNAPVF-LAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPA-QEGFSVHPSN-----GVVSVNM--SRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSV----VLQLGQDALDQSLAIIA-GNEESAFELLQSKAIVLVKP-LDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVH---FLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFD---YEQRQRYDMELLASDMGGKKASVAVR 2956 HSP 8 Score: 116.701 bits (291), Expect = 6.838e-26 Identity = 102/361 (28.25%), Postives = 170/361 (47.09%), Query Frame = 1
Query: 1276 EKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTID-SRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPN--------TPVGRVIATDKDNQTIFY-SLDY---------VSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVF--KMPNSS---LNSIS-LSYKEAAGFSLTKIVAEDPD-DKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
E R+ + D+ + + +++ D NDNSPKFS ++ E + GT QV A D D+G N + Y I HD F I+ + +G++R+ LDRE++++Y+ I+A+D G P+++ T T V + D NDN + PPN T +G VI + N Y +L Y + + F +DR +G +V K +LD E+Q +Y+ A+D + A +++ + V D NDN PVF + P + L +IS +S + F L + A D D + ++++ Y + E FS+ G + + S Y + I A D G P + ++
Sbjct: 2287 EIRVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFV-AQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDN-------------QPTFPPNNLVTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYII--EPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSS 2631 HSP 9 Score: 77.7962 bits (190), Expect = 5.504e-14 Identity = 153/598 (25.59%), Postives = 244/598 (40.80%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDF-----------GDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSG--YKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIA------KSYFLVKPDGEIIVLRQLDYESG-IHKFDFKVIIKDHA---SLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFK--LVTARM-----LDREMEKRIFIRII-CTDSVNHKTSTNIT---VDIGDVNDNSPKFS-DNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI---PAHDIP---FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKL 1875
F LD S KL + R+D E +I H ++T+R+ +D ND++P + + F A S S +S D D G+N ++ Y +E + + F + +G+ + +L S Y + II+ D G P+ + V+ D +F + +R I E P+ SVVL+L G DA + S+A +S F + I++++ LD E ++K V+ H SS V I I D ND +P + S A I E PL S+A +QA D D + + D +T ND + F LVT + LD + + + II DS + + ++ +++ D NDN PKF +H + EN G++ + A D D G G + YSI P+ + F +DS +G++ S D E + Y ++ASD G K S V + DE T + P VG+V ATD D + + Y L + F ++R++G ++ K KL
Sbjct: 2478 FALDRYSGKLVLKRRLDYEL---QQEYELDVIASDAAHEARTVLTVRV--NDENDNAPVFLAQQPPAYFAILP-AISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQ--ISEAAPLGSVVLQL-GQDA--------------LDQSLAIIAGNEESAFELLQSKAIVLVKPLDRERNDLYKLRL-VLSHPHGPPLISSLNSSSGISVIITILDANDNFP------IFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYD---------ITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHF-LAENEPVGSSVFR-AHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVYQLS--APHSHFKVNRSSGAVLIKRKL 3032 HSP 10 Score: 70.4774 bits (171), Expect = 1.016e-11 Identity = 66/254 (25.98%), Postives = 120/254 (47.24%), Query Frame = 1
Query: 175 YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTI---RIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL------ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLV-KPDGEIIVLRQL 906
Y+I + D+ + F +D ++ L VNNR+D ++ + + II H + ++ R+E+ D ND+ P + + ++ E E GS + D D G GQ+ Y++ ESS F + E GL D E + Y + ++++D G K + V VEI ++ TP+F+ +R +P VV ++T +D+D+G +G + + S S+F V + G +++ R+L
Sbjct: 2792 YDITSGNDEHM--FTIDLVTGVLFVNNRLDYDSGAKSYEL---IIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFV-FDYEQRQRYDMELLASDMG--GKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTATDSDSGPDGRVVY-----QLSAPHSHFKVNRSSGAVLIKRKL 3032 HSP 11 Score: 65.855 bits (159), Expect = 2.665e-10 Identity = 125/538 (23.23%), Postives = 214/538 (39.78%), Query Frame = 1
Query: 181 ILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT---IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTII-STDRGIPSKSGRLE-----VEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMR------TNSETGFAIID------ENKPLSTSVALIQASDKDFKESDTVTCTTDNFG-FAESLSLTPTND--------NNEFKLVT-ARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKE--NMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTG--VIRSKDRLDREV-KNLY------QFIIVASDHGSPKLSSTVTALVHVD 1668
I+ P +G F + P + +SVN + R +SS + F+ + G + + +R++ +D + N+++ +E GS + + D D + + F L+Q + L +K LDRE YKL ++ S G P S V + ILD NDN P F S + I E P++ + +L DAD + T + + + G + V +LDY+SG ++ + D + + P P R ++E F + + EN+P+ +SV ASD D FG S+ P+++ ++E LVT A + D E +R + ++ +D K S + V+I ++ +P+F++ + + G QV A D DSG +G VVY + A F ++ +G +I+ K +LD + NLY +I AS LSS + +D
Sbjct: 2580 IIEPAQEG---FSVHPSNGVVSVN--MSRLQPAVSSSGDYFVRIIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGS---VVLQLGQDALDQ-SLAIIAGNEESAFELLQSKAIVL--VKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAE-ISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACD--------------------SHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLD----------KGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVG-QVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGAVLIKRKLKLDGDGDGNLYMDGRDISLVISASSGRHNSLSSMAVVEIALD 3074
BLAST of Protocadherin 1 vs. Ensembl Fly
Match: kug (gene:FBgn0261574 transcript:FBtr0332722) HSP 1 Score: 186.422 bits (472), Expect = 2.177e-47 Identity = 183/662 (27.64%), Postives = 292/662 (44.11%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPI----SFDPDFGDNGQIKYTLESSTDTFILVQEHGLY---LQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCT---TDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDS--VNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPA--HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
+ I++ D ND+ P + ++ S K I + + D D G NG I+Y LES T+ + + +Y + L LDRE +S Y +I+ D G P ++ V ++I+D NDN P F I + +P +V++ L D D E + ++ F + GE+ + + LD E + ++ +I D + + +++ ++N Y Y + TN E+ + T++ ++A D DF+ + D+F + + L A LDRE + + D + + I + + D+NDN P FS +S+ E+ T K V A+DKD G N + YS+ HD F I TG+IR LDRE +L+ + A D G PKL S T V++ D NDNP Y K+ EN+ T V +V AT D N I Y + ++ GKF +D TTG +V + LD E+ Y A D S ++ V I + D+NDN P F +L I+++ G + + A D D + + Y++ FS+D G + + R LD E HY+L+I+ACD G P+ C +
Sbjct: 2846 VLIDVRDENDNYPKFD----NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPI-EGLSVFENALP-GTVLINLLLIDPDI----EKQEMDFFIVSGDKQAQFQIGKSGELFIAKPLDREQ-LMFYNLSIIATDGK---FTAKANVEIDVKDINDNTPYCLKPRYHISTN---------ESISIGTTLVEVKAIDFDFQSKLRFYLSGKGADDFSIGKESGI----------LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITK-VHAMDKDFGVNRQIKYSLMGENHDY-FKISKSTGIIRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQ---NLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNIERGDNIGQFSIDPKNGTISVSRPLD---RETISHYTLEIQACDQGDPQRCNS 3466 HSP 2 Score: 150.984 bits (380), Expect = 2.461e-36 Identity = 179/661 (27.08%), Postives = 294/661 (44.48%), Query Frame = 1
Query: 373 NDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL-ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSI--FRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL-------VTARMLDREMEK--RIFIRIICTDSVNHKTSTNITVDIGDVNDN--SPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDS-GKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVI-VTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFR 2280
N H P + ++ NE G + + D D G NG++ + + + D+ + LQ + LDRE ++ Y L I D G P+KS + + ILD+NDN P ++ FR T E+ + +VV L +DAD+G N + +++ S+ S F V + L + LD E + + KD S + V + ++N ++ Y + + E+ P T +A+I+A D+D + + F E T D F++ T LD E ++ + + I + + +I + I DVN+N +P+F D + +KEN GT V A D D+ N + YSI D F ++ + G I S +LD E KN Y + A D LS+ V + V++ENDN + + Y V E S N + + A D D QTI Y++ + G F ID TGVI T+ KLDRE Q ++ +D + S++S +++ V D+NDN P F + + + + S+ ++ A D D E+ RI YS+ + K + F +D G +++ + LD + + + I+A D G P+ T R
Sbjct: 766 NVHRPEFVNFPQELSINESVQLGETVAWIEAKDRDLGYNGKLVFAISDGDYDSVFRIDPDRGELQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLT----ESARIGTVVHCLHATDADSGINAQVTYAL-----SVECSDFTVNATTGCLRLNKPLDREKQ-DNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFK---------VREDLPRGTVLAVIEAVDEDIGPNAEI-----QFSLKEE-----TQDEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGTFV-MNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQ-GSITSLSQLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEF---DQRVYKVQVPSSATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDS-----DNEFEIHIKAEDNGIPKKSQTAR 1387 HSP 3 Score: 146.747 bits (369), Expect = 4.507e-35 Identity = 168/657 (25.57%), Postives = 293/657 (44.60%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDN--TPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVT---CTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK---QVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTV----TALVHVDDENDNPVII-ETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYS-SLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+ + +DDVND++P + + ++ E G+ ++ + D D G N +I+++L+ T + + +H ++T LD E+K + L + + D G PS + + + + I+D+N+N P F ++ + E P + V+ +T D D + F V G I L QLD E+ F + + ++ S+ V I + +END P T+ + + E + + ++A D D + T+T + + G+ E S T E R LDRE + + + +D S +++ I V + D+NDNSP+F + + + + T N+ QV AID DSG+NG + YSI + F IDS+ G I LD + N ++ I A D+G PK S T + + + P+I+ +TS + EN P V +++A D DN ++Y++ +D F I + G I+ LD E Q Y TD +A + +++ V D+NDNPP F +N IS + +E + + ++ A D D+ + + S +LF +D +G + + + LD E + L + D G P
Sbjct: 966 VYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIGPNAEIQFSLKEETQDEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGK--VKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLG--IFAVNDQGSITSLSQLDAET--KNFYWLTLCAQDCAI-VPLSNCVEVYIQVENENDNIP-------LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIKTTE------RKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVP----SSATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSD--NEFEIHIKAEDNGIPKKSQTARVNIVVVPVNPNSQNAPLIVRKTSENVVDLTENDKPGFLVTQILAVDDDNDQLWYNISNGNDDNTFYIGQDNGNILLSKYLDYETQQSYNLTISVTDGTFTAFTNLLVQVIDINDNPPQFAKDVYHVN-ISENIEEES--VIMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLD---FEKTAQHILIVFVKDQGAP 1590 HSP 4 Score: 132.109 bits (331), Expect = 1.451e-30 Identity = 188/703 (26.74%), Postives = 298/703 (42.39%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLH-------GTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTS--IFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESG-IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDS--VNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQV---KAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDR-LDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDR----EIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
F +DP +L + +DRE +L +T++ T +++ I I DVND+ P + E G+ + D D G N Q+ Y L F + G L+ K LDRE + Y L I + D G P S V V + D+NDN P F IF+ + E +P +V+ + D D G N E FS ET + + + K G I LDYE+ +H I SL + II +EN P+ + + ENKP T V + A D D D + T + + L + ND + + LD E + ++ + D V + + + + NDN P + ++++ E + N ++ KA D D + Y+I + ++ F IDS+TGVI++ +R LDRE + + + SD+GSP LSST +V V D NDN + Y+ +V ++ N + +V A D D N I YS+ KF ID G I LD EI K + + +IV++ V + N P+ + +S N + L+ + GF +T+I+A D D+ + + Y++ N + F + +D G + L + LD E + Y+L I D
Sbjct: 820 FRIDPDRGELQIIGYLDRER-------QNEYVLNITVYDLGNPTKSTSKMLPITIL--DVNDNRPVIQKTLATFRLTESARIGTVVHCLHATDADSGINAQVTYALSVECSDFTVNATTGC-LRLNKPLDREKQDNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFK----VREDLPRGTVLAVIEAVDEDIGPNAEIQFSLKE-ETQDEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSL--TSDMSIVIMIIDVNENRFAPEFDDFVYEGK-------VKENKPKGTFVMNVTARDMD--TVDLNSKITYSITGGDGLGIFAVNDQG--SITSLSQLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTE----ASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSDNEFEIHIKAEDNGIPKKSQTARVNIVVVPVNPNSQNAPLI-VRKTSENVVDLTENDKPGFLVTQILAVDDDNDQ---LWYNISNGNDDNTFYIGQDNGNILLSKYLD---YETQQSYNLTISVTD 1483 HSP 5 Score: 130.183 bits (326), Expect = 5.320e-30 Identity = 153/623 (24.56%), Postives = 282/623 (45.26%), Query Frame = 1
Query: 463 SFDPDFGDNGQIKYTLESS--TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEF-------KLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP-----FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMC 2268
+FDPD I Y + S F + + G+ T ++LDRE+++ + L + +D G P S + V +LDINDN+P F +++ +P + V + ++ D+D+G+NG ++S ++ K+ F + G I + + LD + ++F+ + +D+ G + S++ I+ + Q +R SE + + +KP V I A D D D + +++ ND+N F ++ ++ LD E ++ + I TD TN+ V + D+NDN P+F+ ++ H++I EN++ + Q+ A D+D K F Y + A P F IDS +G + RLD E + I+ D G+P + +V+V D ND+ + KV E++ + + V A D+D N I YS+ + F ID T G+I L+ +Y + A D N S+ V I V ++PP K P +++ +I + G +T++ A + S+ I +++++ + F ++ TG + + ++D E ++L ++ +M C
Sbjct: 1217 AFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQ--VPSSATVNQSIFQVHAIDSDSGENGRITYS---IKSGKGKNKFRIDSQRGHIHIAKPLDSD---NEFEIHIKAEDN---GIPKKSQTARVNIVVVPVNPNSQNAPLIVRKTSENVVDLTENDKP-GFLVTQILAVDDD----------NDQLWY----NISNGNDDNTFYIGQDNGNILLSKYLDYETQQSYNLTISVTDGT-FTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVI-MQLHATDRDEDKKLF--YHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSENDPP--KFPTNNI-AIEIFENLPIGTFVTQVTA-----RSSSSIFFNIISGNINESFRINPSTGVIVINGNID---YESIKVFNLTVKGTNMAAESSC 1798 HSP 6 Score: 117.087 bits (292), Expect = 5.853e-26 Identity = 159/643 (24.73%), Postives = 276/643 (42.92%), Query Frame = 1
Query: 130 LNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT-------IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIP-----SKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXX----XPTETSIAKSYFLVKPDGEIIVLRQLDYESGIH-KFDFKVIIKDHAS---LGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFK-------LVTARMLDREMEKRIFIRIICTDSVN----HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP-AHDIPFTIDSRTGVIRSKDRLDRE-VKNLYQFIIVASDHGSPKLSSTVTAL-VHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVM 1953
LN ++ K+R ++ +K V +F L++ R + + + I +K +H DR V+ I I++ D ND SP + ++ V+ E + D D G NG+I Y+L ++ F + G + L+QL S ++LT+++ DRG ++ + +V + + +N P T F + + P + P+ ++++ +D D G NG +P T + K+ D I L Q + + H ++ ++ +D + Y+ P+ K P+ T E I E P++ V ++ SD D ++ V L + N+ +EF+ L TA+ LD E + + + D N ++S + + + D+NDN P F + +SI EN AG+ K + A D+DSG+N ++ YSI + +PF ID +G++++ LD E +K Y+ II ASD G P T L + V D NDN E KV +++P T V A D D I Y L ++ G FN+D T+G + L + + ATD + + +++
Sbjct: 96 LNAEV-KYRIISGDKEKLFKAEEKLVGDFAF------LAIRTRTNNVVLNREKTEEYVIRVKAHVHLHDRNVSSYETEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQSILKVTADDADLGINGEIYYSLLMDSEYFAIHPTTG-EITLLQQLQYAENSHFELTVVAYDRGSWVNHQNHQASKTKVSISVKQVNFYAPEIFTKTF--SSVTPTSNPLIYGIVRV--NDKDTGINGNIGRLEIVDGNPDGTFLLKA--AETKDEYYIELNQFAHLNQQHFIYNLTLLAEDLGTPRRFAYKSVPIQIK-----------PESKNIPIFT-QEIYEVSIPETAPINMPVIRLKVSDPDLGKNALVY-----------LEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVK-LTAKDRDSGENSYISYSIANLNAVPFEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVNCYGKVTKSAPMGTEVFVTSAIDFDAGDIISYRLSDGNEDGCFNLDPTSGSLSISCDLKKTTLTNRILKVSATDGTHFSDDLII 700 HSP 7 Score: 110.538 bits (275), Expect = 6.499e-24 Identity = 154/588 (26.19%), Postives = 252/588 (42.86%), Query Frame = 1
Query: 469 DPDFGDNGQIKYTL--ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIA-KSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVN--HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPA--HDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSG----KFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD 2193
D DFG + Y + E F++ Q G+ + + DRE K Y + + +D G K G ++V ++D+NDN P F ++ ++ T+ +L + D D NG F A K + IV + G++ + F V D + +EII +D N P S II+ P + L + FK S + D+F ++S +L+ + LDRE ++ + ++ S ++ +D+ D NDN PKF + S+ EN + + K V A D D+G NG + Y + + +I F ID +G I LDREV++ Y F ++A+D+G PK + V + + D NDN + + V EN+ P T + ++ D D + +D+ SG +F I ++ + + K LDRE Y ATD +A + V I V+D+NDN P P IS + + G +L ++ A D D + R S K + FS+ K++G L + +LD
Sbjct: 2577 DGDFGTYANLYYEIVSEEMKKIFLIDQTTGV-ITSKVTFDREKKDEYVVLLKVSDGG--GKFGFASLKVIVVDVNDNVPYFLLKEYK--MVVSTTVEANQTILTVKAKDDDIVDNGSVHFQIVQKSNDKAVKDVIEINEKTGDIVFKSKAESYGVNSYQFFVRASDRGEPQFHSEVPVSIEIIETDAN--------IPTFEKSSVLLKIIESTPPGTVLTKLHMIGNYTFKFS--IAADQDHFMISDS-----------GELILQQTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVK-VSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALPGTVLINLLLIDPDIEK--QEMDFFIVSGDKQAQFQIGKSGELFIAK-PLDREQLMFYNLSIIATDGKFTAKANVEIDVKDINDNTPYCLKPRY---HISTNESISIGTTLVEVKAIDFDFQSKLRFYLS---GKGADDFSIGKESGILKVASALD 3128 HSP 8 Score: 109.383 bits (272), Expect = 1.290e-23 Identity = 159/631 (25.20%), Postives = 261/631 (41.36%), Query Frame = 1
Query: 199 KGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDR-------IVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFA-----IIDENKPLSTSVALIQASDKDFKESDTVTCTT---DNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHK--TSTNITVDIGDVNDNSPKFSDNIIHMSIKENM------------DAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVK--ENSPPNTPVGRVIATDKDN-QTIFYSL-----DYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDN 1980
KG +F + S L V + +DRE P K+ H D I I ++D+ND+ P + + +++V E + + + D DFG N QIKY+L + + + ++ K LDRE S + LT+ + D G+P V V ILDINDN P FS + KI+ E + V K+ + D G N + + + + G++++ LDYE + KF F I ++ N+ Y I + NS T ++E+ + + + ++A+D+D + VT DN G S+ P N + +R LDRE + I D + + S I ++I D NDN+P FS + + ++EN DA T N D SG G + F ++ + G +R+ R + +++ + + D+G+P L S +V + +E+ P I+ +P E + E+ +G+V A+D+D + +SL D S FNI TG I S LD + Y+ +D SIV I VE V ++
Sbjct: 3107 KGADDFSIGKESGILKVASALDRET-TPK--------YKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYS-CKIL-ENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQ--GKFKMDSTTGDLVLNATLDYE--MSKFYFLTI-------------QAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNIERGDNIG---QFSIDPKNGT----ISVSRPLDRETISHYTLEIQACDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKISDADETPNTTPYTFDIRSGNEGGL----------FRLE-QDGSLRTASRFNHNLQDEFVIQVRVFDNGTPPLYSDAWVVVKIIEESQYPPIV--TPLEVTINSFEDDFSGAFIGKVHASDQDKYDELNFSLVSGPDDMYQSSKLFNISNNTGKIYAISNLDIGL---YKLNVSVSDGKFHVFSIVKINVELVTND 3686 HSP 9 Score: 106.686 bits (265), Expect = 8.890e-23 Identity = 150/609 (24.63%), Postives = 259/609 (42.53%), Query Frame = 1
Query: 496 IKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDR---GIPSKSGRL--EVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFG-FAESLSLTPTNDNNEFKL-------VTARMLDREMEKRIFIRIICTDSVNH-KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPA-----HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDN-PVIIETSPYEFKVKENSPPNTPVGRVIATDK---DNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
++Y + + T F + G T DRE K Y+L + + G+ S R +++ +LD+NDN P F + T I + P ++++++ D D+ +NGE Y L K +GE L +LD +SG ++ IK H G+ R+ E V P + + +ID + P+ + +D + ++ + + SL T ++++ F++ LD E + I TDS++ ++V I DVND P+ +I +++I EN GT K + A D DSG N + Y I + + F ID G + K LD E + ++ DHGSP LSS + V D NDN P +E S Y KV + V A DK D ++ Y + Y ++ ++ID+ TGVI ++ L+ + +D +++A + + I + N P+F + S + G ++ + A D D A + Y +V+E+ +F +D+ TG + + + D E +D Y + ++ D G
Sbjct: 2066 VEYRILNPTQLFDIGISSGALKTTGVIFDREVKDLYRLFVEAKSMLYDGMNSNVRRAVTSIDISVLDVNDNCPLFVNMPYYATVSIDD--PKGTIIMQVKAIDLDSAENGEV-------------RYELKKGNGE---LFKLDRKSG------ELSIKQHVE-GHNRNYELTVAAYDGAIT---------PCSSEAPLQVKVIDRSMPVFEKQFYTVSVKEDVEMYSALSVSIEAESPLGRSLIYTISSESQSFEIDYNTGSIFVVNELDYEKISSHDVSIRATDSLSGVYAEVVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILK-INATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCFVEPS-YFTKVSVAAVRGQFVALPKAYDKDISDTDSLEYKIVYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVHTAYARLKISLLPENVYSPLF---DQSTYEAQVPENLLHGHNIITVKASDGDFGTYANLYYEIVSEEMKKIFLIDQTTGVITSKVTFD---REKKDEYVVLLKVSDGG 2632 HSP 10 Score: 105.916 bits (263), Expect = 1.515e-22 Identity = 171/675 (25.33%), Postives = 279/675 (41.33%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTD-----TFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK-----------QVKAIDKDSGKNGFVVYSIPAHDIP---FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALV--HVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKS--KLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQR 2304
+ +++ D+ND+ P + + + V N E+ I D ++ ++ Y L ++ D F + G + T ++LD E + + L + D+G P K ++ V + D ND+ P F+ I + +PE+ + S + ++ D D+G N E +S T S F + P II L + I ++ +V D LG S II ++ P P + I EN P+ T V + A + S ++ + ES + P+ +V +D E K + + T+ + NI + I D NDN P F N ++ E+ G+ K QVK D D G NG V Y I D+ F IDS TG I +LD E Y F + SD G PKL ST TA V V + ND P + + + N V +V A D DN T+ + + + + F I++ TG+I T++ L+ E Y A+D + SA IV I V D+ F+ + ++ + K A L ++ D+ ++Y ++N + LF + +G L + E +D Y L +EA M + G N++R
Sbjct: 1492 LLVQVIDINDNPPQFAKDVYHV--NISENIEEESVIMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVT-QRLDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSK--VPESAAIGSKLAEVRAIDRDSGHNAEIQYSII---TGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVD---LGNPPLSSQIPVHIIVTMSENDP-----PKFPTNNIAIEIF-ENLPIGTFVTQVTA-----RSSSSIFFNIISGNINESFRINPSTG----VIVINGNIDYESIKVFNLTVKGTNMAAESSCQNIIIHILDANDNIPYFVQNEYVGALPESAAIGSYVLKVHDSSKDHLTLQVK--DADVGVNGMVEYHI-VDDLAKNFFKIDSTTGAIELLRQLDYETNAGYTFDVTVSDMGKPKLHSTTTAHVTIRVINVNDCPPVFNERELNVTLFLPTFENVFVRQVSAKDADNDTLRFDIVDGNTNECFQIEKYTGIITTRNFEILNNENDRDYALHVRASDGIFSAILIVKIKVLSAIDSNFAFQRESYRFSAFENNTK-VATIGLVNVIGNTLDEN----VEYRILNP--TQLFDIGISSGALKTTGVI--FDREVKDLYRLFVEAKSM-------LYDGMNSNVRR 2121 HSP 11 Score: 102.449 bits (254), Expect = 1.823e-21 Identity = 152/594 (25.59%), Postives = 247/594 (41.58%), Query Frame = 1
Query: 577 LDREHKSGYKLTIIST----DRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDR---------EMEKRIFIRIICTDSVNHKTS-----TNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDH---GSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDRE-IQHKYQFRAFATDK---LNSASSIVM-IFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD---------GAHAEDRDHYSLDI 2235
L+RE Y + + + DR + S + +++LD ND +P F + + T +IPE P +LK+T DAD G NGE +S + YF + P GEI +L+QL Y H F+ V+ D S + + + + Q+ FY ++T ++ + PL +++ +DKD T N G L + N + F L A D + ++ FI + + + T ++ + I + N P F+ I +SI E + +K D D GKN V I + F I+ +G++ + +LD E K+ Y + A D GS K SS + V D NDN I E + EN+ + V ++ A D+D N I YS+ + ++ F ID +G++ T S LD E ++ Y+ A+D + I + I V+D+NDN P F+ N ++ S +T + D D I Y + + F+LD +G L + L A D H+S D+
Sbjct: 137 LNREKTEEYVIRVKAHVHLHDRNVSSYETEANIHIKVLDRNDLSPLFYPTQY--TVVIPEDTPKYQSILKVTADDADLGINGEIYYSLL-----MDSEYFAIHPTTGEITLLQQLQYAENSH-FELTVVAYDRGSW----VNHQNHQASKTKVSISVKQVNFYAPEIFTKTFSSVTPTSNPL--IYGIVRVNDKD-------TGINGNIG---RLEIVDGNPDGTFLLKAAETKDEYYIELNQFAHLNQQHFIYNLTLLAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIR-LKVSDPDLGKNALVYLEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVK-ISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDSGENSYISYSIANL-NAVPFEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVN-CYGKVTKSAPMGTEVFVTSAIDFDAGDI----ISYRLSDGNEDGCFNLDPTSGSLSISCDLKKTTLTNRILKVSATDGTHFSDDL 698 HSP 12 Score: 89.3521 bits (220), Expect = 1.614e-17 Identity = 98/355 (27.61%), Postives = 168/355 (47.32%), Query Frame = 1
Query: 1249 TARMLDREMEK--RIFI--RIICTDSVN---HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNS--ASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQY---SVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCT 2271
T + DRE++ R+F+ + + D +N + T+I + + DVNDN P F + + ++ + GT QVKAID DS +NG V Y + + F +D ++G + K ++ +N Y+ + A D SS V V D + PV E Y VKE+ + + I + +++ Y++ S+S F ID TG I ++LD E + ATD L+ A ++ + + DVND P + S + ++++ + G + KI A D D +A++ Y S+ + S LF +D G LYL+ LD E ++ + + D G+P + +
Sbjct: 2089 TGVIFDREVKDLYRLFVEAKSMLYDGMNSNVRRAVTSIDISVLDVNDNCPLFVNMPYYATVSIDDPKGTII-MQVKAIDLDSAENGEVRYELKKGNGELFKLDRKSGELSIKQHVEGHNRN-YELTVAAYDGAITPCSSEAPLQVKVIDRS-MPV-FEKQFYTVSVKEDVEMYSALSVSIEAESPLGRSLIYTIS--SESQSFEIDYNTGSIFVVNELDYEKISSHDVSIRATDSLSGVYAEVVLSVSIMDVNDCYPEIE---SDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLKTPLD---YEQIKYHHIVVNVKDHGSPSLSS 2431 HSP 13 Score: 73.9442 bits (180), Expect = 8.760e-13 Identity = 168/732 (22.95%), Postives = 313/732 (42.76%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNW--KINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLK-QLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKD-----FKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTA-------RMLDREMEKRIFIRIICTD----SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSI----KENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVI--RSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDY--VSDSGKFNIDRTTGVIVTKSKL-DREIQHKYQF----RAFATDKLNS----ASSIVMIFVEDVNDNPPVF-KMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINI 2298
F +D IS + V R+D E I + G I + + D NDH P + KI + KV E GS+ + + D D G N +I+Y++ + + + + TL L+ Y L + + D G P S ++ V + + ++ P+F T+ I E +P+ + V ++T + + F+ +I +S+ + G I++ +DYES I F+ V + A+ SS + I I D ND P N G + E+ + + V + S KD K++D + + L+ N FK+ + R LD E + +D ++ T+ ++T+ + +VND P F++ +++++ EN+ +QV A D D+ F + ++ F I+ TG+I R+ + L+ E Y + ASD S+ + + V D+ + Y F EN NT V + + T+ +++Y ++ + F+I ++G + T + DRE++ Y+ ++ D +NS A + + I V DVNDN P+F MP + ++S + G + ++ A D D E+ ++Y + + LF LD+ +G L +++ ++G + +Y L + A D G C++ ++ +
Sbjct: 1555 FRIDSISGNVIVTQRLDFEKT--AQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKV--PESAAIGSKLAEVRAIDRDSGHNAEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSENDPPKFPTNNIAIE--IFENLPIGTFVTQVTARSSSS-------IFFNIISGNINESFRINPSTGVIVINGNIDYES-IKVFNLTVKGTNMAA----ESSCQNIIIHILDANDNIPY-----FVQNEYVG--ALPESAAIGSYVLKVHDSSKDHLTLQVKDADVGVNGMVEYHIVDDLA------KNFFKIDSTTGAIELLRQLDYETNAGYTFDVTVSDMGKPKLHSTTTAHVTIRVINVNDCPPVFNERELNVTLFLPTFENVFV-----RQVSAKDADNDTLRFDIVDGNTNEC-FQIEKYTGIITTRNFEILNNENDRDYALHVRASDG---IFSAILIVKIKVLSAIDSNFAFQRESYRFSAFEN---NTKVATIGLVNVIGNTLDENVEYRILNPTQLFDIGISSGALKTTGVIFDREVKDLYRLFVEAKSMLYDGMNSNVRRAVTSIDISVLDVNDNCPLFVNMPYYA----TVSIDDPKGTIIMQVKAIDLDSAENGEVRYE-LKKGNGELFKLDRKSGELSIKQHVEGHNR----NYELTVAAYD-GAITPCSSEAPLQVKV 2233 HSP 14 Score: 71.2478 bits (173), Expect = 5.111e-12 Identity = 134/533 (25.14%), Postives = 233/533 (43.71%), Query Frame = 1
Query: 340 IVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLE-SSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQV---KAIDKDSGKNGFVVYSIPAHD--IPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGK--FNIDRTTGVIVTKSKLDREIQHKY 1899
+ +I I + DVND+ P + + + + G+ + D D +NG+++Y L+ + + F L ++ G ++KQ H Y+LT+ + D I S ++V+++D + P F + T + E + + S + +++ G++ T +S ++S+ + G I V+ +LDYE I D + D S Y +E + + I D ND YP+I+ S+ I EN T + I A+D D + ++ ++ + L D + L LD E K I + D S + + +N+ + + D+NDN+P F + S + + V KA DKD + Y I + ++ID TGVI ++ L+ K+ I SD + +L+ EN + + S YE +V EN + V A+D D T ++Y + VS+ K F ID+TTGVI +K DRE + +Y
Sbjct: 2123 VTSIDISVLDVNDNCPLFVNMPYYATVSIDDPKGTIIMQVKAIDLDSAENGEVRYELKKGNGELFKLDRKSGEL--SIKQHVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVID--RSMPVFEKQFY--TVSVKEDVEMYSALSVSIEAESPLGRS------LIYTISSESQSFEIDYNTGSIFVVNELDYEK-ISSHDVSIRATDSLSGVY---AEVVLSVSIMDVNDCYPEIE-------SDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESINGQNNSELFYI-DVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCF----VEPSYFTKVSVAAVRGQFVALPKAYDKDISDTDSLEYKIVYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVHTAYARLKISLL---PENVYSPLFDQSTYEAQVPENLLHGHNIITVKASDGDFGTYANLYYEI--VSEEMKKIFLIDQTTGVITSKVTFDREKKDEY 2622 HSP 15 Score: 53.9138 bits (128), Expect = 9.371e-7 Identity = 52/172 (30.23%), Postives = 80/172 (46.51%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLES------STDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRF 705
Q+F +D + + V N +D E I SS + I +L G V + + I DVND P + + + + E G++ + D D G N ++ Y +ES S +I V + LYL+T LD E + + + D G PS S R V + + D+NDN P F
Sbjct: 2283 QSFEIDYNTGSIFVVNELDYEKI---SSHDVSIRATDSLSGVYAEVVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLKT--PLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCF 2449
BLAST of Protocadherin 1 vs. Ensembl Fly
Match: ft (gene:FBgn0001075 transcript:FBtr0077478) HSP 1 Score: 186.422 bits (472), Expect = 2.273e-47 Identity = 200/735 (27.21%), Postives = 332/735 (45.17%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNG---QIKYTLESSTDTFILVQEHG-------LYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEII-------VLRQLDYESGIHKFD--FKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTAR---------MLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHD--IPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHG-SPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDS---GKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKL----NSASSIVMIFVEDVNDNPPVFKMPNSSLNS-------ISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
+ F LDP++ ++ N +DRE + + + ++ ++ T I +RI++ DVND+SP + + F+E +G+R + + D D G+NG Q + + + F LV L+L+T LDRE + Y+L I + D G P + G L+V V ILD+NDN P F S + + + ET + V+ + SD D G N + ++ + TE F V P+ +I +Q + +S + F V +DH S + + V ++ ++++D +F+P A +DEN T VA + D D S+ + N+ F+L A +LDRE + + ++ D + T+ ++ +D+ DVND+ P F + + E G+ + A D+D+G N V Y I + + F++D TG+I + LDRE+++ + I A D G +PK + T ++ + DEND + E++PP T V + ATD D N ++ ++L + +F +D TG + T+ LDRE +Y+ A D+ SA++ V + V DVNDN P F P + S I L + L + A D DD ++A I+Y + LF LD +G + L R A + HY L + A D G R
Sbjct: 101 REFTLDPVTGEVKTNVVLDREGMR-----DHYDLVVLSSQPTYPI-EVRIKVLDVNDNSPEFPEPSIAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVS--LNETALPGTPVVTVMASDNDLGDNSKITYYLAETEHQ-----FTVNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFP----DGGKVATVDENAVNGTVVAAVAVKDSD-----------SGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFV-ASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVI-ILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQF-YPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYR-LESGGEGLFQLDARSGAISL-RGDAPASMHWKPHYKLLVSARDAGQRR 802 HSP 2 Score: 176.792 bits (447), Expect = 2.192e-44 Identity = 175/597 (29.31%), Postives = 287/597 (48.07%), Query Frame = 1
Query: 475 DFGDNGQIKYTLES-STDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLV--------TARMLDREMEKRIF---IRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTA--LVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD----NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKL---NSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPD-DKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD 2193
D G N ++ Y+L + + + V H ++ +K + + Y+L + +TDRG+P +S V + + N +TPRFS + ++ I+PE PV S +L + +D D G NG +S + + + + + + G I++ +QLDY+ I ++ + ++D LGY S + II + ++ P + N + I ENKP+ T V A+DKD ++ + ++ F P+ + F ++ +A D E E+RI+ I+ DS + ++ N+ V + VN+ P+F + H + E GT V+A DKDSG++G V Y + ++D F ID+ TG+I LDRE +N ++A ++GS + + T A ++ + D ND P I+ Y + E +P T V V A DKD N YS+ + F ID TG I T S+LDRE Y A D + S+ V I +EDVNDN P F LN +S E AG S+ ++A DPD + Y ++ K+ S S+D+++G + S D
Sbjct: 3153 DLGTN-EMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQ--VIVPENEPVGSTILTVGATDDDTGPNGMLRYSI--SGGNERQDFSVDERTGGIVIQQQLDYDL-IQEYHLNITVQD---LGYHPLSSVAMLTIILTDVNDNPPV------FNHKEYHCYIPENKPVGTFVFQAHAADKDSPKNAII-----HYAF------LPSGPDRHFFIMNQSNGTISSAVSFDYE-ERRIYTLQIKAKNPDS-SMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGA-VQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGNDPPEFIKHY-YTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFT--PEGLNGY-ISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVDRNSGVVRSTTSFD 3716 HSP 3 Score: 166.777 bits (421), Expect = 2.968e-41 Identity = 208/772 (26.94%), Postives = 341/772 (44.17%), Query Frame = 1
Query: 67 KSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILK---VTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILVQEHG-LYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRF-STSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSI--AKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLG-YXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVT-----CTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSV--NHKTSTNITVDI-----GDVNDNSPKFSD-NIIHMSIKENMDAGT---TTNKQVKAIDKD--------SGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVK-NLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTF 2277
++P H+ + THI D + + D Y + + G F LD + +LS+ R+DRE + I+ I++ H +I I + D ND++P + + +V E G+ + D D G N Q+ +++ + DTF + G LYL K LD E + Y L I ++D G PS S + V ++D NDN P F ST+I R K E +P+++ ++ +T D D+G NG+ S++ S E + + + + G I LR++D ES I F V+ D A + S+E V +I+ D ND P F M N+ +K ST+V + A D D + VT + F + + +FK E R + + TD + + S+ + + I G + P+F + + S+ EN GT T + + + + +G G V D F ID++ G++ + LDRE Y+ + A G +S V V D+ND+P +P+ + V E+ + + A D D L GKF ++ +TG ++ LDRE + KY+ R +D + + I V D NDNPP+F+ ++ S + G+ + +IVA D D ++A++ Y VV++ + +FSL+ TG L L LD E+ HY L ++A D G P + TT
Sbjct: 1280 RAPYHVTISEGASEGTHITHVFTQDADEGLNGD-VYYSLAKGNEAG--QFNLDSATGQLSLGRRLDRE----SQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLH--KPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIK---EGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRES-IDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAP--VFVSM--NAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFK----------QEVRYQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASAEIEYFVTNVTATGSRGQV-------DRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAIALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRIRVSDGVQYTEAYATIQVSDTNDNPPLFE---DTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTARLD---YEEVQHYILIVQAQDNGQPSLSTTI 2011 HSP 4 Score: 157.918 bits (398), Expect = 1.763e-38 Identity = 173/614 (28.18%), Postives = 273/614 (44.46%), Query Frame = 1
Query: 559 LQTLKQLDREHKSGYKLTIISTDRGIPSKS------GRLEVEVEILDINDNTPRFSTSI-FRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESG--IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIG--DVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREV----------------------KNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK-----LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
+ T + LDRE ++ Y+LTI+++ S + G+ V + I+D+NDN P F+ PT +PE V + D DAG N S+S T+ F + P G + + R + E G IH +++ D S SS+ + ++I+D ND P T+ ET + E ++T + A+D D ++ ++ + P + L LDRE + + C D+ S+ + V I D NDN+P+F+++ SI EN A T K + A+D+D G+N + +++ + FTID+R G I++ DRE N SD+G P+L V V V D NDN +PY + E + T + V D D N ++YSL +++G+FN+D TG + +LDRE Q + A D L+S +SI ++ V D NDN P F +S ++ + S G L + A D D ++++ +S+ F +D TG LYL + LD ED Y+L+I A D GTP + TT
Sbjct: 888 ITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSL----TNNPNQQFRIGPVTGVLYLQRPIRAEPGSLIH---VELMATDAGSP--PLSSKLSLSVLIADVNDHTPVFD----HTSYETS---LPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFP-----DGYLFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGK-LTAVDRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIV-VLDENDNAPEFTQSSSEVSVLETS---PTGTELMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLD---YEDITSYTLNITASDCGTPSLSTT 1472 HSP 5 Score: 155.606 bits (392), Expect = 7.733e-38 Identity = 207/730 (28.36%), Postives = 320/730 (43.84%), Query Frame = 1
Query: 205 VQNFILDPISSKLSVNNRIDRE-------AICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHK---VIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTD-TFILVQEHG-LYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKE----SDTVTCTTDNF------GFAESL------SLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSV--NHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHG-SPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-KLNSASSIVM--IFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFS--LTKIVAEDPDDKESARIQYSVVNEK----YSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
QNF +D S +++ +DRE I +SS + +G + I I D+ND++P + +++ + E G + D D G N +I Y+L ++ + F + G LYLQ + + E S + +++TD G P S +L + V I D+ND+TP F + + + +PET V + L +D D G NG S+ T + F V PDG + V LD E + + V +D RSS V I + DEND PQ TNS F+ I EN P T V + A D+D S T++ T +F GF ++L +L + N E + + + +D+ + + V + DVNDN+P+F H++I E GT V D D G NG V YS+ + F +DS TG + RLDRE + ++ I+VA D LSS + + V DENDN S E V E SP T + R A+D D N + +S+ + F+ID TG + LD E Y A+D S S+ V+ + V D NDNPP+F P++ +I KE + + A+DPD + ++ Y++ ++ F ++ +TG ++ R +D E D + L + A D P
Sbjct: 876 AQNFRIDTRSGRITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQ---CIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNPNQQFRIGPVTGVLYLQ--RPIRAEPGSLIHVELMATDAGSPPLSSKLSLSVLIADVNDHTPVFDHTSYETS--LPETTKVNTRFFALAATDIDLGDNGRISYEIIEGNT---ERMFGVFPDGYLFVRAPLDREERDY-YALTVSCRDAGQP--SRSSVVPVVIHVIDENDNAPQF------TNSTFTFS-IPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHIT-HVFTQDADEGLNGDVYYSLAKGNEAGQFNLDSATGQLSLGRRLDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIF--PST---AIVRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREID---RESIDTFRLTVVATDRAQP 1576 HSP 6 Score: 147.517 bits (371), Expect = 2.516e-35 Identity = 204/752 (27.13%), Postives = 314/752 (41.76%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRI--VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL------VTARMLDREMEKRIFIRIICTDSVNH--------------------------------------KTSTNITVDIGDVNDNSPKF-SDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP-AHD--------IPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKL--NSA--SSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKE-SARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
F +D LS +DREA + + I L G R +R+ + D ND P + +E G S + DPD G + + L D L++ L LDRE KS Y+L I +D G+ ++V D NDN P F +++ + IPE V ++ DAD GQN + S+ + A F + P G + + +LDYE H + +I++ + S+ V + D ND P F PM +SE + EN P++T V + A D D + N G E S+T + ++EF + T R LDRE + + D + ++ +T+ I DVND P F S N +I EN+ A T VKA+D D G+NG++ Y + A D +PF+++ G +R D LDRE+++ Y I A D G P S+ L+ + DENDN + + Y V EN+ V +V ATD D N I YS+ + F+I TGV+ L+ E +Y A D N A ++ + I + D+NDN P F + + G+ LT + A D D +++++Y + E S LF ++ +G + L + LD E + Y+L + A D G+P + T
Sbjct: 1765 FDIDAKLGILSTAAELDREAGPEEYEVEVYAI---ALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPD--TLGSVTFLLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRIRVSD-GVQYTEAYATIQVS--DTNDNPPLFEDTVY--SFDIPENAQRGYQVGQIVARDADLGQNAQLSYGVV---SDWANDVFSLNPQTGMLTLTARLDYEEVQH---YILIVQAQDNGQPSLSTTITVYCNVLDLNDNAP--IFDPMSYSSE-----VFENVPIATEVVTVSAKDID----------SGNNGLIE-YSITAGDVDSEFGIDSNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISAN--ETAIMENV-AINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLT-VNAYDADTPPLNSQVRY-FLKEGDSDLFRINASSGDIALLKPLD---REQQSEYTLTLVAMDTGSPPLTGT 2474 HSP 7 Score: 144.821 bits (364), Expect = 2.081e-34 Identity = 200/760 (26.32%), Postives = 318/760 (41.84%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICP--------TSSINCFIILKVTLHGTDRI---VTIRIEIDDVNDHSP----NWKINKHKVI-FNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDT--FILVQEHGLYLQTLKQ-LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYE-------------SGIH-KFDF---KVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLS-LTPTN---DNNEFKLVTARMLDREMEKRIFIRIICTDS---VNHKTSTNITVDIGDVNDNSPKF---------SDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIPFTIDSRTGVI--RSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVI----IETSPYEFKVKE------NSPPNTPVG--RVIATD-KDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNS---------ASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
F ++P + +S R++ CP S +C + HG+ R + + + D NDH P + + KV +E G+ + D D G NG+ + S + F L + L++ + LDRE Y LT+++ D+G P+++ + +++ D+ND+ P F S + + ++ E P S V +T +D D G N + + + +F + P G I+ LD E G + KF + KVII D NDE PQ + R + T + E+ P T VAL+ A+D D + +VT F A S+ L P D +L T R LDRE + I +I D + + +++ DVNDN P+F +D+ + +K+ ++ V A DKD G N + Y + + F +D+R+G I R K Y+ ++ A D G + S A+V + ++ ++ + YEF++ E NS PN VG +V +T+ K N I Y + + F ID +G I T LDRE Q Y+ A+ +S IV I + D+NDN PVF + S +ISL A G + D D ++RI YS+ N + F + TG LYLQR + AE +++ A D G
Sbjct: 314 HQFTVNPETGVISTTERVN----CPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEY--SAVLSELAPTGSFVASITATDEDTGVNAQVHYDIL---SGNELKWFSMDPLTGLIVTTGPLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDE--------------------NDEAPQ---FSQREQNVT----LGEDAPPQTIVALMTATDHDQGTNGSVT-----FALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERIL-LHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDAGQRR--SQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVEDHEQQRNSQPNREVGIVQVKSTNGKANSHIEYDIIQGDRAQNFRIDTRSGRITTARPLDREEQANYRLTILASSSSSSSAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDRDAGVNSRISYSLTNNP-NQQFRIGPVTGVLYLQRPI---RAEPGSLIHVELMATDAG 1025 HSP 8 Score: 139.428 bits (350), Expect = 8.223e-33 Identity = 184/725 (25.38%), Postives = 313/725 (43.17%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTL-------HGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYT--LESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSG-RLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQ-SVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD----------GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSV---NHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP-FTIDSRTGVIRSKDRLDREVKN----LYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSG----KFNIDRTTGVI-VTKSKLDREIQHKYQFRAFATD----KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
F L+P +L V + +DRE + +L +T T+ + IRI D ND+SP + ++ E G+ + D D G NG+I+Y+ L F + ++ G+ ++ K L+ E S Y LT+ + D + + +G E+ + ILDINDN P F S + +++ T+P VL + DAD P + + YFL + D G+I +L+ LD E ++ ++ D S + RVE+ ++ND +++ Y A + EN P T V +A+DKD + + F D+ ++ TA LDRE + ++ DS +S N+T+ + DVNDN PKF ++++ E + G +A+D D G+N V Y+I D F I+++TGV+ +K L + K+ Y +I A D G LSS V + P + F + E+ P + +V AT + + + Y G +D +G++ V + LD E+ H Y+ A D L S +++ + V D NDN PV + + + + +E+ + + A D D ++ + Y + N+ + F + ++G +Y + LD E+ Y+ +EA D G P M T
Sbjct: 2221 FSLNPTDGQLRVVDALDRE-------LRSSYLLNITARDRGEPPQSTESQLLIRIL--DENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGV-VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYL-ARVMENTVPPNGGYVLTVNAYDADT----------PPLNSQV--RYFLKEGDSDLFRINASSGDIALLKPLDREQQ-SEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSY---------HATVRENLPSGTHVLTPRATDKDEGLNAKL-----RFNLLGEHMHRFHIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFG-ARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTVILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSP-KKGLVGKIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSV-TLITLNVTDANDNAPVMEQ---LIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQND-FDGTFEI-TESGEIYTRMRLD---REEIGDYAFVVEAVDQGVPHMTGT 2896 HSP 9 Score: 134.806 bits (338), Expect = 2.134e-31 Identity = 204/806 (25.31%), Postives = 333/806 (41.32%), Query Frame = 1
Query: 82 IYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEI--LNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDR------------IVTIRIEIDDVNDHSPNWKINKHKVI---FNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIF----RPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLR---QLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI---PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKY---------------------------------------QFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSL-------FSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCT 2271
+ +IKE +P+ I + D P Y I P+ ++F ++ + + IDRE SI+ F ++T+ TDR +VT+ +E D+ND++P + ++ F+ + + + + D D NG + Y + S +Q + + + + Y+LT+ STD + S+ EV + I+ S F + + + E P+ + +L +T A A E+ + S + L D ++ +L +LD E+G +++ +V A G R+S ++V + + D+ND PQ P N + E+ + +++ ++A D D S T + G L P+ KL+ LDRE + + +RI +D V + T T+ + D NDN P F D + I EN G Q+ A D D G+N + Y + A+D+ F+++ +TG++ RLD E Y I+ A D+G P LS+T+T +V D NDN I + Y +V EN P T V V A D D N I YS+ +F ID + G I T+ LDRE + Y +F A + S++ V I ++DVND PVF S N ++ A + + A D D+ + I Y + + + FSL+ G L R +D E R Y L+I A D G P T
Sbjct: 1495 VRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHTLREIDRE------SIDTF---RLTVVATDRAQPSERQLSTEKLVTVIVE--DINDNAPVFVSMNAAILPPKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQFKQEVRYQLTLKSTDEAVQSERRSSEVYITIITPGSGGSESSVPQFEQRSKLSGSVYENEPIGTSILTVTAHLASA--EIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDREAGPEEYEVEVYAI--ALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYN-------VSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDG---KFLLEPSTG----KLILNDTLDRETKSKYELRIRVSDGVQY-TEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVG-QIVARDADLGQNAQLSYGVVSDWANDV-FSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSEFGID-SNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFI----SANETAIMENVAINTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQL---RVVDALDRELRSSYLLNITARDRGEPPQST 2260 HSP 10 Score: 131.724 bits (330), Expect = 1.815e-30 Identity = 157/588 (26.70%), Postives = 251/588 (42.69%), Query Frame = 1
Query: 313 KVTLHGTDRIV-------TIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST---DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLV-KPDGEIIVLRQLDYESG-IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAI-IDENKPLSTSVALIQASDKDFKESDTV----TCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD----SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKD-SGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIF-YSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNP 1983
++ + TDR V + I + N +P + +N ++VI E E GS + D D G NG ++Y++ D + + G+ +Q +QLD + Y L I D G S + + + D+NDN P F+ + IPE PV + V + +D D+ +N ++F P+ + +F++ + +G I DYE I+ K D + Y + + N+ YPQ P+ F + E + T V +QA+DKD E V ++++ GF D N + AR LDRE + R+ + ++ + N + + I D ND P+F + +I E GT VKAIDKD +N YSI ++ F ID +TG I + RLDRE + Y +I A D G P + + T + ++D NDN + EN P T + +IA+D D N F Y L ++DR +GV+ + + DRE+ + D + ++ I V D NDNP
Sbjct: 3196 ELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQDFSVDERTGGIVIQ--QQLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYH--CYIPENKPVGTFVFQAHAADKDSPKNAIIHYAFLPSGPD--RHFFIMNQSNGTISSAVSFDYEERRIYTLQIKAKNPDSSMESYANLYVHVLGV-----NEFYPQF-LQPV-------FHFDVSETSAVGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGF--------RIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGND-PPEFIKHYYTSTISEAAPVGTKVTT-VKAIDKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKPKQKSQHLLTITVLDQNDNP 3754 HSP 11 Score: 122.094 bits (305), Expect = 1.755e-27 Identity = 155/614 (25.24%), Postives = 267/614 (43.49%), Query Frame = 1
Query: 472 PDFGDNGQIKYTLESS--TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAI-IDENKPLSTSVALIQASDKDFKESDTVTCT-TDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKD-SGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLD-------REVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDN---QTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKL---NSASSIVMIFVEDVNDNPPVFKMPNSSLNS--ISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
P G G+I+Y + D+ + GL LD E Y++ I + D PS + + + D NDN P I+ +++ E P Q + + + SD D+G NG + + F + GEI +LD E I + F V D + + V + + D+ND P KF + F++ + EN + + V + +SD D + + + ++N G E + P + N + A LDRE + ++++ +D + T IT+ I D NDN+P+F + S E + Q+ A D+D G N + YS+ F+ID TG + SK + R +N+Y ++A+D+G P L S +++ D ++NP E + Y + +++ + RV A DK + + YSL + S F++ R G I + +Y+ ATD+ S + V+I V N + P F S+NS + + E G ++ + A D D + ++YS+ FS+D+ TG + +Q+ LD ++ Y L+I D+G
Sbjct: 2731 PKKGLVGKIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYN-AEVLEEESPPQLIAV-VKASDRDSGDNGNVIYRLQ----NDFDGTFEITESGEIYTRMRLDREE-IGDYAFVVEAVDQGVP--HMTGTASVLLHLLDKNDNPP--KFTRL-------FSLNVTENAEIGSFVIRVTSSDLDLGANANASYSFSENPG--EKFRIEPQSGN----ITVAGHLDREQQDEYILKVVASDGA-WRAETPITITIQDQNDNAPEFEHSFYSFSFPE-LQQSIALVGQIIATDRDKQGPNSVISYSLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRF-----SVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQDFSVDERTGGIVIQQQLDYDLIQE---YHLNITVQDLG 3310 HSP 12 Score: 118.627 bits (296), Expect = 1.982e-26 Identity = 188/760 (24.74%), Postives = 319/760 (41.97%), Query Frame = 1
Query: 169 TGYEILNPR----DKGV-------------QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT--------IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKS----GYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFS---------TSIFRPTKIIPE---TMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ--LDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDRE-MEKRIFIRIICTDSVNHKTST-NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI---PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQ----TIFYSLDYVSDSGKFNIDRTTGVIVTK-------SKLDREIQHKYQFRAFATDKLNS---ASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+G +L PR D+G+ F +D + ++S +DRE + +TL D +T + I + DVND+ P + + V E G + D D G+N + YT+ + + + T +L + KS Y + I + D+G S S + E+ V IL + P F+ + RP K+I + T P + +V K+ + A I V P+ ++ + Q LDYE + +++ + D SL S + + + ++D ND P ++ + N+E +++E P +A+++ASD+D ++ V N F + +T + + + T LDRE + F+ V H T T ++ + + D NDN PKF+ + +++ EN + G+ + V + D D G N YS P F I+ ++G I LDRE ++ Y +VASD G+ + + +T + + D+NDN E S Y F E VG++IATD+D Q I YSL S F+ID TG + +K S+ R ++ Y ATD + +V I + D ++NPP F+ L G + ++ A D D + + YS++ SS+FS+ + G++ L + + Y L + A D G P
Sbjct: 2506 SGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHIDSETGEISTATTLDREETS---------VYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSHDDLTYTIVISAMDQGEQSLSSKAELTV-ILRPPELFPTFAYMANSHFAMSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGG----------------IMGDSLRVDPNSGLLSVGQDGLDYELTHLYEIWIEAADGDTPSL----RSVTLITLNVTDANDNAPVME--QLIYNAE----VLEEESPPQL-IAVVKASDRDSGDNGNVIYRLQN-DFDGTFEITESGE-----IYTRMRLDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFT-RLFSLNVTENAEIGSFVIR-VTSSDLDLGANANASYSFSENPGEK--FRIEPQSGNITVAGHLDREQQDEYILKVVASD-GAWRAETPIT--ITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQ--QPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEY---LAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGRHDGWITLVKPI---QVPPNTRYELVVRATDRGVP 3207 HSP 13 Score: 90.5077 bits (223), Expect = 6.929e-18 Identity = 100/367 (27.25%), Postives = 154/367 (41.96%), Query Frame = 1
Query: 1258 MLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFV-VYSIPAHDI--PFTI--------DSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDK---DNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLD---------REIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPV--FKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
+LDRE + + ++ + + I V DVNDNSP+F + I +S E+ +GT A D D G+NG Y I A ++ F + D+ + + LDRE + YQ I A D GSP + V + D NDNP I + S Y + E + P TPV V+A+D DN I Y L +F ++ TGVI T +++ Q F FA D + V + + D ND+ P+ F+ ++ G + + +D D + R +V+ F L+ + L++ R E+ Y+L + A D GTP TT
Sbjct: 117 VLDREGMRDHYDLVVLSSQPTYPIEVRIKVL--DVNDNSPEFPEPSIAISFSESATSGTRLLLDA-ATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVTVMASDNDLGDNSKITYYL--AETEHQFTVNPETGVISTTERVNCPQQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGKVATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLE-EAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTT 477 HSP 14 Score: 54.299 bits (129), Expect = 7.686e-7 Identity = 50/176 (28.41%), Postives = 81/176 (46.02%), Query Frame = 1
Query: 175 YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFI-ILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQ-IKYTL-ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDN 693
Y I+N K Q+F +D + ++S +R+DRE TS+ N I + L T+ IE++DVND+ P + +E E AG+ I+ DPD NG Y L +++ V + +++ DRE + I D G P + + + + +LD NDN
Sbjct: 3583 YSIINGNLK--QSFKIDVQTGEISTASRLDREE---TSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLIASDPDLPRNGGPFTYQLIGGKHKSWLSVDRNSGVVRSTTSFDREMTPILEAIIEVEDSGKPKQKSQHLLTITVLDQNDN 3753
BLAST of Protocadherin 1 vs. Ensembl Fly
Match: kug (gene:FBgn0261574 transcript:FBtr0346077) HSP 1 Score: 186.422 bits (472), Expect = 2.457e-47 Identity = 183/662 (27.64%), Postives = 292/662 (44.11%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPI----SFDPDFGDNGQIKYTLESSTDTFILVQEHGLY---LQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCT---TDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDS--VNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPA--HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
+ I++ D ND+ P + ++ S K I + + D D G NG I+Y LES T+ + + +Y + L LDRE +S Y +I+ D G P ++ V ++I+D NDN P F I + +P +V++ L D D E + ++ F + GE+ + + LD E + ++ +I D + + +++ ++N Y Y + TN E+ + T++ ++A D DF+ + D+F + + L A LDRE + + D + + I + + D+NDN P FS +S+ E+ T K V A+DKD G N + YS+ HD F I TG+IR LDRE +L+ + A D G PKL S T V++ D NDNP Y K+ EN+ T V +V AT D N I Y + ++ GKF +D TTG +V + LD E+ Y A D S ++ V I + D+NDN P F +L I+++ G + + A D D + + Y++ FS+D G + + R LD E HY+L+I+ACD G P+ C +
Sbjct: 2846 VLIDVRDENDNYPKFD----NTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPI-EGLSVFENALP-GTVLINLLLIDPDI----EKQEMDFFIVSGDKQAQFQIGKSGELFIAKPLDREQ-LMFYNLSIIATDGK---FTAKANVEIDVKDINDNTPYCLKPRYHISTN---------ESISIGTTLVEVKAIDFDFQSKLRFYLSGKGADDFSIGKESGI----------LKVASALDRETTPKYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITK-VHAMDKDFGVNRQIKYSLMGENHDY-FKISKSTGIIRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQ---NLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNIERGDNIGQFSIDPKNGTISVSRPLD---RETISHYTLEIQACDQGDPQRCNS 3466 HSP 2 Score: 150.599 bits (379), Expect = 2.773e-36 Identity = 179/661 (27.08%), Postives = 294/661 (44.48%), Query Frame = 1
Query: 373 NDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL-ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSI--FRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL-------VTARMLDREMEK--RIFIRIICTDSVNHKTSTNITVDIGDVNDN--SPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDS-GKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVI-VTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFR 2280
N H P + ++ NE G + + D D G NG++ + + + D+ + LQ + LDRE ++ Y L I D G P+KS + + ILD+NDN P ++ FR T E+ + +VV L +DAD+G N + +++ S+ S F V + L + LD E + + KD S + V + ++N ++ Y + + E+ P T +A+I+A D+D + + F E T D F++ T LD E ++ + + I + + +I + I DVN+N +P+F D + +KEN GT V A D D+ N + YSI D F ++ + G I S +LD E KN Y + A D LS+ V + V++ENDN + + Y V E S N + + A D D QTI Y++ + G F ID TGVI T+ KLDRE Q ++ +D + S++S +++ V D+NDN P F + + + + S+ ++ A D D E+ RI YS+ + K + F +D G +++ + LD + + + I+A D G P+ T R
Sbjct: 766 NVHRPEFVNFPQELSINESVQLGETVAWIEAKDRDLGYNGKLVFAISDGDYDSVFRIDPDRGELQIIGYLDRERQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLT----ESARIGTVVHCLHATDADSGINAQVTYAL-----SVECSDFTVNATTGCLRLNKPLDREKQ-DNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFK---------VREDLPRGTVLAVIEAVDEDIGPNAEI-----QFSLKEE-----TQDEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGTFV-MNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQ-GSITSLSQLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEF---DQRVYKVQVPSSATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDS-----DNEFEIHIKAEDNGIPKKSQTAR 1387 HSP 3 Score: 146.747 bits (369), Expect = 5.253e-35 Identity = 168/657 (25.57%), Postives = 293/657 (44.60%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDN--TPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVT---CTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK---QVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTV----TALVHVDDENDNPVII-ETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYS-SLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+ + +DDVND++P + + ++ E G+ ++ + D D G N +I+++L+ T + + +H ++T LD E+K + L + + D G PS + + + + I+D+N+N P F ++ + E P + V+ +T D D + F V G I L QLD E+ F + + ++ S+ V I + +END P T+ + + E + + ++A D D + T+T + + G+ E S T E R LDRE + + + +D S +++ I V + D+NDNSP+F + + + + T N+ QV AID DSG+NG + YSI + F IDS+ G I LD + N ++ I A D+G PK S T + + + P+I+ +TS + EN P V +++A D DN ++Y++ +D F I + G I+ LD E Q Y TD +A + +++ V D+NDNPP F +N IS + +E + + ++ A D D+ + + S +LF +D +G + + + LD E + L + D G P
Sbjct: 966 VYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIGPNAEIQFSLKEETQDEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGK--VKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLG--IFAVNDQGSITSLSQLDAET--KNFYWLTLCAQDCAI-VPLSNCVEVYIQVENENDNIP-------LTDKPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIKTTE------RKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVP----SSATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSD--NEFEIHIKAEDNGIPKKSQTARVNIVVVPVNPNSQNAPLIVRKTSENVVDLTENDKPGFLVTQILAVDDDNDQLWYNISNGNDDNTFYIGQDNGNILLSKYLDYETQQSYNLTISVTDGTFTAFTNLLVQVIDINDNPPQFAKDVYHVN-ISENIEEES--VIMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLD---FEKTAQHILIVFVKDQGAP 1590 HSP 4 Score: 131.724 bits (330), Expect = 1.748e-30 Identity = 188/703 (26.74%), Postives = 298/703 (42.39%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLH-------GTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTS--IFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESG-IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDS--VNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQV---KAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDR-LDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDR----EIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
F +DP +L + +DRE +L +T++ T +++ I I DVND+ P + E G+ + D D G N Q+ Y L F + G L+ K LDRE + Y L I + D G P S V V + D+NDN P F IF+ + E +P +V+ + D D G N E FS ET + + + K G I LDYE+ +H I SL + II +EN P+ + + ENKP T V + A D D D + T + + L + ND + + LD E + ++ + D V + + + + NDN P + ++++ E + N ++ KA D D + Y+I + ++ F IDS+TGVI++ +R LDRE + + + SD+GSP LSST +V V D NDN + Y+ +V ++ N + +V A D D N I YS+ KF ID G I LD EI K + + +IV++ V + N P+ + +S N + L+ + GF +T+I+A D D+ + + Y++ N + F + +D G + L + LD E + Y+L I D
Sbjct: 820 FRIDPDRGELQIIGYLDRER-------QNEYVLNITVYDLGNPTKSTSKMLPITIL--DVNDNRPVIQKTLATFRLTESARIGTVVHCLHATDADSGINAQVTYALSVECSDFTVNATTGC-LRLNKPLDREKQDNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFK----VREDLPRGTVLAVIEAVDEDIGPNAEIQFSLKE-ETQDEELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSL--TSDMSIVIMIIDVNENRFAPEFDDFVYEGK-------VKENKPKGTFVMNVTARDMD--TVDLNSKITYSITGGDGLGIFAVNDQG--SITSLSQLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTE----ASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSDNEFEIHIKAEDNGIPKKSQTARVNIVVVPVNPNSQNAPLI-VRKTSENVVDLTENDKPGFLVTQILAVDDDNDQ---LWYNISNGNDDNTFYIGQDNGNILLSKYLD---YETQQSYNLTISVTD 1483 HSP 5 Score: 130.183 bits (326), Expect = 6.041e-30 Identity = 153/623 (24.56%), Postives = 282/623 (45.26%), Query Frame = 1
Query: 463 SFDPDFGDNGQIKYTLESS--TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEF-------KLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP-----FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMC 2268
+FDPD I Y + S F + + G+ T ++LDRE+++ + L + +D G P S + V +LDINDN+P F +++ +P + V + ++ D+D+G+NG ++S ++ K+ F + G I + + LD + ++F+ + +D+ G + S++ I+ + Q +R SE + + +KP V I A D D D + +++ ND+N F ++ ++ LD E ++ + I TD TN+ V + D+NDN P+F+ ++ H++I EN++ + Q+ A D+D K F Y + A P F IDS +G + RLD E + I+ D G+P + +V+V D ND+ + KV E++ + + V A D+D N I YS+ + F ID T G+I L+ +Y + A D N S+ V I V ++PP K P +++ +I + G +T++ A + S+ I +++++ + F ++ TG + + ++D E ++L ++ +M C
Sbjct: 1217 AFDPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQ--VPSSATVNQSIFQVHAIDSDSGENGRITYS---IKSGKGKNKFRIDSQRGHIHIAKPLDSD---NEFEIHIKAEDN---GIPKKSQTARVNIVVVPVNPNSQNAPLIVRKTSENVVDLTENDKP-GFLVTQILAVDDD----------NDQLWY----NISNGNDDNTFYIGQDNGNILLSKYLDYETQQSYNLTISVTDGT-FTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVI-MQLHATDRDEDKKLF--YHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSENDPP--KFPTNNI-AIEIFENLPIGTFVTQVTA-----RSSSSIFFNIISGNINESFRINPSTGVIVINGNID---YESIKVFNLTVKGTNMAAESSC 1798 HSP 6 Score: 116.701 bits (291), Expect = 6.588e-26 Identity = 159/643 (24.73%), Postives = 276/643 (42.92%), Query Frame = 1
Query: 130 LNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT-------IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIP-----SKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXX----XPTETSIAKSYFLVKPDGEIIVLRQLDYESGIH-KFDFKVIIKDHAS---LGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFK-------LVTARMLDREMEKRIFIRIICTDSVN----HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP-AHDIPFTIDSRTGVIRSKDRLDRE-VKNLYQFIIVASDHGSPKLSSTVTAL-VHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVM 1953
LN ++ K+R ++ +K V +F L++ R + + + I +K +H DR V+ I I++ D ND SP + ++ V+ E + D D G NG+I Y+L ++ F + G + L+QL S ++LT+++ DRG ++ + +V + + +N P T F + + P + P+ ++++ +D D G NG +P T + K+ D I L Q + + H ++ ++ +D + Y+ P+ K P+ T E I E P++ V ++ SD D ++ V L + N+ +EF+ L TA+ LD E + + + D N ++S + + + D+NDN P F + +SI EN AG+ K + A D+DSG+N ++ YSI + +PF ID +G++++ LD E +K Y+ II ASD G P T L + V D NDN E KV +++P T V A D D I Y L ++ G FN+D T+G + L + + ATD + + +++
Sbjct: 96 LNAEV-KYRIISGDKEKLFKAEEKLVGDFAF------LAIRTRTNNVVLNREKTEEYVIRVKAHVHLHDRNVSSYETEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQSILKVTADDADLGINGEIYYSLLMDSEYFAIHPTTG-EITLLQQLQYAENSHFELTVVAYDRGSWVNHQNHQASKTKVSISVKQVNFYAPEIFTKTF--SSVTPTSNPLIYGIVRV--NDKDTGINGNIGRLEIVDGNPDGTFLLKA--AETKDEYYIELNQFAHLNQQHFIYNLTLLAEDLGTPRRFAYKSVPIQIK-----------PESKNIPIFT-QEIYEVSIPETAPINMPVIRLKVSDPDLGKNALVY-----------LEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVK-LTAKDRDSGENSYISYSIANLNAVPFEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVNCYGKVTKSAPMGTEVFVTSAIDFDAGDIISYRLSDGNEDGCFNLDPTSGSLSISCDLKKTTLTNRILKVSATDGTHFSDDLII 700 HSP 7 Score: 110.153 bits (274), Expect = 7.631e-24 Identity = 154/588 (26.19%), Postives = 252/588 (42.86%), Query Frame = 1
Query: 469 DPDFGDNGQIKYTL--ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIA-KSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVN--HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPA--HDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSG----KFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD 2193
D DFG + Y + E F++ Q G+ + + DRE K Y + + +D G K G ++V ++D+NDN P F ++ ++ T+ +L + D D NG F A K + IV + G++ + F V D + +EII +D N P S II+ P + L + FK S + D+F ++S +L+ + LDRE ++ + ++ S ++ +D+ D NDN PKF + S+ EN + + K V A D D+G NG + Y + + +I F ID +G I LDREV++ Y F ++A+D+G PK + V + + D NDN + + V EN+ P T + ++ D D + +D+ SG +F I ++ + + K LDRE Y ATD +A + V I V+D+NDN P P IS + + G +L ++ A D D + R S K + FS+ K++G L + +LD
Sbjct: 2577 DGDFGTYANLYYEIVSEEMKKIFLIDQTTGV-ITSKVTFDREKKDEYVVLLKVSDGG--GKFGFASLKVIVVDVNDNVPYFLLKEYK--MVVSTTVEANQTILTVKAKDDDIVDNGSVHFQIVQKSNDKAVKDVIEINEKTGDIVFKSKAESYGVNSYQFFVRASDRGEPQFHSEVPVSIEIIETDAN--------IPTFEKSSVLLKIIESTPPGTVLTKLHMIGNYTFKFS--IAADQDHFMISDS-----------GELILQQTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVK-VSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALPGTVLINLLLIDPDIEK--QEMDFFIVSGDKQAQFQIGKSGELFIAK-PLDREQLMFYNLSIIATDGKFTAKANVEIDVKDINDNTPYCLKPRY---HISTNESISIGTTLVEVKAIDFDFQSKLRFYLS---GKGADDFSIGKESGILKVASALD 3128 HSP 8 Score: 108.997 bits (271), Expect = 1.594e-23 Identity = 159/631 (25.20%), Postives = 261/631 (41.36%), Query Frame = 1
Query: 199 KGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDR-------IVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFA-----IIDENKPLSTSVALIQASDKDFKESDTVTCTT---DNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHK--TSTNITVDIGDVNDNSPKFSDNIIHMSIKENM------------DAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVK--ENSPPNTPVGRVIATDKDN-QTIFYSL-----DYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDN 1980
KG +F + S L V + +DRE P K+ H D I I ++D+ND+ P + + +++V E + + + D DFG N QIKY+L + + + ++ K LDRE S + LT+ + D G+P V V ILDINDN P FS + KI+ E + V K+ + D G N + + + + G++++ LDYE + KF F I ++ N+ Y I + NS T ++E+ + + + ++A+D+D + VT DN G S+ P N + +R LDRE + I D + + S I ++I D NDN+P FS + + ++EN DA T N D SG G + F ++ + G +R+ R + +++ + + D+G+P L S +V + +E+ P I+ +P E + E+ +G+V A+D+D + +SL D S FNI TG I S LD + Y+ +D SIV I VE V ++
Sbjct: 3107 KGADDFSIGKESGILKVASALDRET-TPK--------YKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYS-CKIL-ENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQ--GKFKMDSTTGDLVLNATLDYE--MSKFYFLTI-------------QAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNIERGDNIG---QFSIDPKNGT----ISVSRPLDRETISHYTLEIQACDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKISDADETPNTTPYTFDIRSGNEGGL----------FRLE-QDGSLRTASRFNHNLQDEFVIQVRVFDNGTPPLYSDAWVVVKIIEESQYPPIV--TPLEVTINSFEDDFSGAFIGKVHASDQDKYDELNFSLVSGPDDMYQSSKLFNISNNTGKIYAISNLDIGL---YKLNVSVSDGKFHVFSIVKINVELVTND 3686 HSP 9 Score: 106.301 bits (264), Expect = 1.126e-22 Identity = 150/609 (24.63%), Postives = 259/609 (42.53%), Query Frame = 1
Query: 496 IKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDR---GIPSKSGRL--EVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFG-FAESLSLTPTNDNNEFKL-------VTARMLDREMEKRIFIRIICTDSVNH-KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPA-----HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDN-PVIIETSPYEFKVKENSPPNTPVGRVIATDK---DNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
++Y + + T F + G T DRE K Y+L + + G+ S R +++ +LD+NDN P F + T I + P ++++++ D D+ +NGE Y L K +GE L +LD +SG ++ IK H G+ R+ E V P + + +ID + P+ + +D + ++ + + SL T ++++ F++ LD E + I TDS++ ++V I DVND P+ +I +++I EN GT K + A D DSG N + Y I + + F ID G + K LD E + ++ DHGSP LSS + V D NDN P +E S Y KV + V A DK D ++ Y + Y ++ ++ID+ TGVI ++ L+ + +D +++A + + I + N P+F + S + G ++ + A D D A + Y +V+E+ +F +D+ TG + + + D E +D Y + ++ D G
Sbjct: 2066 VEYRILNPTQLFDIGISSGALKTTGVIFDREVKDLYRLFVEAKSMLYDGMNSNVRRAVTSIDISVLDVNDNCPLFVNMPYYATVSIDD--PKGTIIMQVKAIDLDSAENGEV-------------RYELKKGNGE---LFKLDRKSG------ELSIKQHVE-GHNRNYELTVAAYDGAIT---------PCSSEAPLQVKVIDRSMPVFEKQFYTVSVKEDVEMYSALSVSIEAESPLGRSLIYTISSESQSFEIDYNTGSIFVVNELDYEKISSHDVSIRATDSLSGVYAEVVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILK-INATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCFVEPS-YFTKVSVAAVRGQFVALPKAYDKDISDTDSLEYKIVYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVHTAYARLKISLLPENVYSPLF---DQSTYEAQVPENLLHGHNIITVKASDGDFGTYANLYYEIVSEEMKKIFLIDQTTGVITSKVTFD---REKKDEYVVLLKVSDGG 2632 HSP 10 Score: 105.531 bits (262), Expect = 1.888e-22 Identity = 171/675 (25.33%), Postives = 279/675 (41.33%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTD-----TFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNK-----------QVKAIDKDSGKNGFVVYSIPAHDIP---FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALV--HVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKS--KLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQR 2304
+ +++ D+ND+ P + + + V N E+ I D ++ ++ Y L ++ D F + G + T ++LD E + + L + D+G P K ++ V + D ND+ P F+ I + +PE+ + S + ++ D D+G N E +S T S F + P II L + I ++ +V D LG S II ++ P P + I EN P+ T V + A + S ++ + ES + P+ +V +D E K + + T+ + NI + I D NDN P F N ++ E+ G+ K QVK D D G NG V Y I D+ F IDS TG I +LD E Y F + SD G PKL ST TA V V + ND P + + + N V +V A D DN T+ + + + + F I++ TG+I T++ L+ E Y A+D + SA IV I V D+ F+ + ++ + K A L ++ D+ ++Y ++N + LF + +G L + E +D Y L +EA M + G N++R
Sbjct: 1492 LLVQVIDINDNPPQFAKDVYHV--NISENIEEESVIMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVT-QRLDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSK--VPESAAIGSKLAEVRAIDRDSGHNAEIQYSII---TGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVD---LGNPPLSSQIPVHIIVTMSENDP-----PKFPTNNIAIEIF-ENLPIGTFVTQVTA-----RSSSSIFFNIISGNINESFRINPSTG----VIVINGNIDYESIKVFNLTVKGTNMAAESSCQNIIIHILDANDNIPYFVQNEYVGALPESAAIGSYVLKVHDSSKDHLTLQVK--DADVGVNGMVEYHI-VDDLAKNFFKIDSTTGAIELLRQLDYETNAGYTFDVTVSDMGKPKLHSTTTAHVTIRVINVNDCPPVFNERELNVTLFLPTFENVFVRQVSAKDADNDTLRFDIVDGNTNECFQIEKYTGIITTRNFEILNNENDRDYALHVRASDGIFSAILIVKIKVLSAIDSNFAFQRESYRFSAFENNTK-VATIGLVNVIGNTLDEN----VEYRILNP--TQLFDIGISSGALKTTGVI--FDREVKDLYRLFVEAKSM-------LYDGMNSNVRR 2121 HSP 11 Score: 102.064 bits (253), Expect = 2.087e-21 Identity = 152/594 (25.59%), Postives = 247/594 (41.58%), Query Frame = 1
Query: 577 LDREHKSGYKLTIIST----DRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDR---------EMEKRIFIRIICTDSVNHKTS-----TNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDH---GSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDRE-IQHKYQFRAFATDK---LNSASSIVM-IFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD---------GAHAEDRDHYSLDI 2235
L+RE Y + + + DR + S + +++LD ND +P F + + T +IPE P +LK+T DAD G NGE +S + YF + P GEI +L+QL Y H F+ V+ D S + + + + Q+ FY ++T ++ + PL +++ +DKD T N G L + N + F L A D + ++ FI + + + T ++ + I + N P F+ I +SI E + +K D D GKN V I + F I+ +G++ + +LD E K+ Y + A D GS K SS + V D NDN I E + EN+ + V ++ A D+D N I YS+ + ++ F ID +G++ T S LD E ++ Y+ A+D + I + I V+D+NDN P F+ N ++ S +T + D D I Y + + F+LD +G L + L A D H+S D+
Sbjct: 137 LNREKTEEYVIRVKAHVHLHDRNVSSYETEANIHIKVLDRNDLSPLFYPTQY--TVVIPEDTPKYQSILKVTADDADLGINGEIYYSLL-----MDSEYFAIHPTTGEITLLQQLQYAENSH-FELTVVAYDRGSW----VNHQNHQASKTKVSISVKQVNFYAPEIFTKTFSSVTPTSNPL--IYGIVRVNDKD-------TGINGNIG---RLEIVDGNPDGTFLLKAAETKDEYYIELNQFAHLNQQHFIYNLTLLAEDLGTPRRFAYKSVPIQIKPESKNIPIFTQEIYEVSIPETAPINMPVIR-LKVSDPDLGKNALVYLEIVGGNEGDEFRINPDSGMLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVK-ISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDSGENSYISYSIANL-NAVPFEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQFERVN-CYGKVTKSAPMGTEVFVTSAIDFDAGDI----ISYRLSDGNEDGCFNLDPTSGSLSISCDLKKTTLTNRILKVSATDGTHFSDDL 698 HSP 12 Score: 89.3521 bits (220), Expect = 1.655e-17 Identity = 98/355 (27.61%), Postives = 168/355 (47.32%), Query Frame = 1
Query: 1249 TARMLDREMEK--RIFI--RIICTDSVN---HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNS--ASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQY---SVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCT 2271
T + DRE++ R+F+ + + D +N + T+I + + DVNDN P F + + ++ + GT QVKAID DS +NG V Y + + F +D ++G + K ++ +N Y+ + A D SS V V D + PV E Y VKE+ + + I + +++ Y++ S+S F ID TG I ++LD E + ATD L+ A ++ + + DVND P + S + ++++ + G + KI A D D +A++ Y S+ + S LF +D G LYL+ LD E ++ + + D G+P + +
Sbjct: 2089 TGVIFDREVKDLYRLFVEAKSMLYDGMNSNVRRAVTSIDISVLDVNDNCPLFVNMPYYATVSIDDPKGTII-MQVKAIDLDSAENGEVRYELKKGNGELFKLDRKSGELSIKQHVEGHNRN-YELTVAAYDGAITPCSSEAPLQVKVIDRS-MPV-FEKQFYTVSVKEDVEMYSALSVSIEAESPLGRSLIYTIS--SESQSFEIDYNTGSIFVVNELDYEKISSHDVSIRATDSLSGVYAEVVLSVSIMDVNDCYPEIE---SDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLKTPLD---YEQIKYHHIVVNVKDHGSPSLSS 2431 HSP 13 Score: 73.559 bits (179), Expect = 1.011e-12 Identity = 168/732 (22.95%), Postives = 313/732 (42.76%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNW--KINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLK-QLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKD-----FKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTA-------RMLDREMEKRIFIRIICTD----SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSI----KENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVI--RSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDY--VSDSGKFNIDRTTGVIVTKSKL-DREIQHKYQF----RAFATDKLNS----ASSIVMIFVEDVNDNPPVF-KMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINI 2298
F +D IS + V R+D E I + G I + + D NDH P + KI + KV E GS+ + + D D G N +I+Y++ + + + + TL L+ Y L + + D G P S ++ V + + ++ P+F T+ I E +P+ + V ++T + + F+ +I +S+ + G I++ +DYES I F+ V + A+ SS + I I D ND P N G + E+ + + V + S KD K++D + + L+ N FK+ + R LD E + +D ++ T+ ++T+ + +VND P F++ +++++ EN+ +QV A D D+ F + ++ F I+ TG+I R+ + L+ E Y + ASD S+ + + V D+ + Y F EN NT V + + T+ +++Y ++ + F+I ++G + T + DRE++ Y+ ++ D +NS A + + I V DVNDN P+F MP + ++S + G + ++ A D D E+ ++Y + + LF LD+ +G L +++ ++G + +Y L + A D G C++ ++ +
Sbjct: 1555 FRIDSISGNVIVTQRLDFEKT--AQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKV--PESAAIGSKLAEVRAIDRDSGHNAEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSENDPPKFPTNNIAIE--IFENLPIGTFVTQVTARSSSS-------IFFNIISGNINESFRINPSTGVIVINGNIDYES-IKVFNLTVKGTNMAA----ESSCQNIIIHILDANDNIPY-----FVQNEYVG--ALPESAAIGSYVLKVHDSSKDHLTLQVKDADVGVNGMVEYHIVDDLA------KNFFKIDSTTGAIELLRQLDYETNAGYTFDVTVSDMGKPKLHSTTTAHVTIRVINVNDCPPVFNERELNVTLFLPTFENVFV-----RQVSAKDADNDTLRFDIVDGNTNEC-FQIEKYTGIITTRNFEILNNENDRDYALHVRASDG---IFSAILIVKIKVLSAIDSNFAFQRESYRFSAFEN---NTKVATIGLVNVIGNTLDENVEYRILNPTQLFDIGISSGALKTTGVIFDREVKDLYRLFVEAKSMLYDGMNSNVRRAVTSIDISVLDVNDNCPLFVNMPYYA----TVSIDDPKGTIIMQVKAIDLDSAENGEVRYE-LKKGNGELFKLDRKSGELSIKQHVEGHNR----NYELTVAAYD-GAITPCSSEAPLQVKV 2233 HSP 14 Score: 71.2478 bits (173), Expect = 5.513e-12 Identity = 134/533 (25.14%), Postives = 233/533 (43.71%), Query Frame = 1
Query: 340 IVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLE-SSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQV---KAIDKDSGKNGFVVYSIPAHD--IPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGK--FNIDRTTGVIVTKSKLDREIQHKY 1899
+ +I I + DVND+ P + + + + G+ + D D +NG+++Y L+ + + F L ++ G ++KQ H Y+LT+ + D I S ++V+++D + P F + T + E + + S + +++ G++ T +S ++S+ + G I V+ +LDYE I D + D S Y +E + + I D ND YP+I+ S+ I EN T + I A+D D + ++ ++ + L D + L LD E K I + D S + + +N+ + + D+NDN+P F + S + + V KA DKD + Y I + ++ID TGVI ++ L+ K+ I SD + +L+ EN + + S YE +V EN + V A+D D T ++Y + VS+ K F ID+TTGVI +K DRE + +Y
Sbjct: 2123 VTSIDISVLDVNDNCPLFVNMPYYATVSIDDPKGTIIMQVKAIDLDSAENGEVRYELKKGNGELFKLDRKSGEL--SIKQHVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVID--RSMPVFEKQFY--TVSVKEDVEMYSALSVSIEAESPLGRS------LIYTISSESQSFEIDYNTGSIFVVNELDYEK-ISSHDVSIRATDSLSGVY---AEVVLSVSIMDVNDCYPEIE-------SDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESINGQNNSELFYI-DVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCF----VEPSYFTKVSVAAVRGQFVALPKAYDKDISDTDSLEYKIVYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVHTAYARLKISLL---PENVYSPLFDQSTYEAQVPENLLHGHNIITVKASDGDFGTYANLYYEI--VSEEMKKIFLIDQTTGVITSKVTFDREKKDEY 2622 HSP 15 Score: 53.9138 bits (128), Expect = 9.856e-7 Identity = 52/172 (30.23%), Postives = 80/172 (46.51%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLES------STDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRF 705
Q+F +D + + V N +D E I SS + I +L G V + + I DVND P + + + + E G++ + D D G N ++ Y +ES S +I V + LYL+T LD E + + + D G PS S R V + + D+NDN P F
Sbjct: 2283 QSFEIDYNTGSIFVVNELDYEKI---SSHDVSIRATDSLSGVYAEVVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYYIESINGQNNSELFYIDVTDGNLYLKT--PLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITVKDLNDNAPCF 2449
BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 290.812 bits (743), Expect = 1.065e-82 Identity = 274/884 (31.00%), Postives = 418/884 (47.29%), Query Frame = 1
Query: 16 HKMFILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDI-----PKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF----ILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKF-YPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMC----------------TTFRGFKINIQRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKESQNIHPTLNPYFQNVNGKSI 2541
H + +L LF ++ ++ + Y +KEE P IG L D+ P + + + ++ + + L+ NRIDRE +C + C+ ++V + + R+V IR I+D+ND++P ++ + E SR +P +FDPD G NG Y L S F I E + Q + Q LDRE K + + I D G P KS ++V + D+NDN P F S +PE P+ + V L +DAD G N + FSFS + K +F + +I ++Q LD E + +HK +++ AS G S + V + ++D ND P I Y M N G ++ EN PL+T +ALI +D+D + VTC TD+ L P N++F L TA LD E + IRI+ +DS TS + + I D NDN P F I +SI EN D GT K + A D DSG N ++YS+ D P F IDSR+G++ RLDRE + Y F ++A D+G+ L S VT + V D+NDN Y F V EN P VG + TD D +L ++ F ID TGVI DRE Q Y F A D ++ + V I V DVNDN PVF +P+S+ + + + G +T++ A D D +A +QYS++ LF++DK TG + LQ + A D+ + L ++ D+G P TF ++ L + G ++ ++G ++IA+I + +I+V IF+ L+R + K ++S+ ++P N +G+ I
Sbjct: 8 HVLVVLFTCLF---LMCRAQEKDYTVKEEQPENVRIGNLRKDLNLNLDPDIKLSSALQFKPVYKTGDVPLVKVEASTGEILTTANRIDREKLCSGVFNEKRCYYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVN--VPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPSTKRHFAIDSTTGLITVKQPLDREVNPVHKL---IVL---ASDGSSTPSRATVIVNVTDINDNVPSIDTRYIM--NLVNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCYTDH---DVPFRLKPVF-NDQFLLETAAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIK-ISATDADSGSNALIIYSL-GPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPSNTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSLRGLFTIDKTTGNITLQEKIVAA---DQGLHRLVVKVKDLGQPESLHAIALVHLFVNDTVSNATFIQEQLRKSLETPLERNIGDNDVTPQTNGYVI-VVIAIIAGTMTVILV-IFVTALVRCRQTPRHKVVQKSKQSGEWVSP---NQDGRQI 864
BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 291.582 bits (745), Expect = 1.595e-82 Identity = 274/884 (31.00%), Postives = 418/884 (47.29%), Query Frame = 1
Query: 16 HKMFILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDI-----PKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF----ILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKF-YPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMC----------------TTFRGFKINIQRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKESQNIHPTLNPYFQNVNGKSI 2541
H + +L LF ++ ++ + Y +KEE P IG L D+ P + + + ++ + + L+ NRIDRE +C + C+ ++V + + R+V IR I+D+ND++P ++ + E SR +P +FDPD G NG Y L S F I E + Q + Q LDRE K + + I D G P KS ++V + D+NDN P F S +PE P+ + V L +DAD G N + FSFS + K +F + +I ++Q LD E + +HK +++ AS G S + V + ++D ND P I Y M N G ++ EN PL+T +ALI +D+D + VTC TD+ L P N++F L TA LD E + IRI+ +DS TS + + I D NDN P F I +SI EN D GT K + A D DSG N ++YS+ D P F IDSR+G++ RLDRE + Y F ++A D+G+ L S VT + V D+NDN Y F V EN P VG + TD D +L ++ F ID TGVI DRE Q Y F A D ++ + V I V DVNDN PVF +P+S+ + + + G +T++ A D D +A +QYS++ LF++DK TG + LQ + A D+ + L ++ D+G P TF ++ L + G ++ ++G ++IA+I + +I+V IF+ L+R + K ++S+ ++P N +G+ I
Sbjct: 8 HVLVVLFTCLF---LMCRAQEKDYTVKEEQPENVRIGNLRKDLNLNLDPDIKLSSALQFKPVYKTGDVPLVKVEASTGEILTTANRIDREKLCSGVFNEKRCYYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVN--VPENAPMGTSVTHLHATDADLGSNAQIHFSFSNQISPSTKRHFAIDSTTGLITVKQPLDREVNPVHKL---IVL---ASDGSSTPSRATVIVNVTDINDNVPSIDTRYIM--NLVNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCYTDH---DVPFRLKPVF-NDQFLLETAAPLDYETTREYAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIK-ISATDADSGSNALIIYSL-GPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPSNTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSLRGLFTIDKTTGNITLQEKIVAA---DQGLHRLVVKVKDLGQPESLHAIALVHLFVNDTVSNATFIQEQLRKSLETPLERNIGDNDVTPQTNGYVI-VVIAIIAGTMTVILV-IFVTALVRCRQTPRHKVVQKSKQSGEWVSP---NQDGRQI 864
BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 263.848 bits (673), Expect = 2.456e-73 Identity = 237/756 (31.35%), Postives = 350/756 (46.30%), Query Frame = 1
Query: 82 IYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKL-SVNNRIDREAI--CPTSSINCFIILKVTL-----HGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFIL-----VQEHGLYLQ---TLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNN-----EFKLVTARMLDREMEKRIFIRIICTDSVNHK-TSTN-ITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP---FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+YR+ EE P + +IG L D + TG+ L + G +D + + + IDRE + C CF+ +V++ + + R++ RIE+ D+ND++P + + E H G+ SIP++ D D NG YTL + + L ++ G L L LDRE K Y LTI + D G P + + V I D NDN P+F S + + E P+ VL++ +D+D G NGE ++ + K + + G I V LD E I+ F V+ +D + +++ ++N +I+ + T+S+ G A I E+ P+ T+VAL+Q SDKD E+ VTC L P +D++ ++ L T LD E + + I+ DS N +STN + V + D NDNSP FS + + E G +V A D DSG N +VYSI A F ID +G +R++ LDRE K+ Y+F + A+D G P T T ++ V D NDN S Y F V EN PP +PVG V D D + L D GKF I TG I++ DRE + Y FR A D + S V I V D NDN PV P++S + I LS A + + AED D +A + YS+ LF + G + L + L H+ + L I+ D G P
Sbjct: 26 LYRVHEEQPPSTLIGSLAAD----QGLPDTGH--LYKLEVGAPYLRVDGKTGDIFTTEIPIDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVPENTHMGALFSIPLATDKDTERNGVADYTLTAGPEAVALFGLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNAPKFEKSSYEAE--VAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKLLRIDRSSGIIYVKGPLDREE-INNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTHSD-GVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAG---DVPFQLRPASDSSVDNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAEENQPGEKV-VEVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNS-SFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHDLFYISPSNGEITLTKELTRKHS---GLHRLVIKVSDRGKP 763
BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 265.003 bits (676), Expect = 5.036e-73 Identity = 237/756 (31.35%), Postives = 350/756 (46.30%), Query Frame = 1
Query: 82 IYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKL-SVNNRIDREAI--CPTSSINCFIILKVTL-----HGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFIL-----VQEHGLYLQ---TLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNN-----EFKLVTARMLDREMEKRIFIRIICTDSVNHK-TSTN-ITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP---FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+YR+ EE P + +IG L D + TG+ L + G +D + + + IDRE + C CF+ +V++ + + R++ RIE+ D+ND++P + + E H G+ SIP++ D D NG YTL + + L ++ G L L LDRE K Y LTI + D G P + + V I D NDN P+F S + + E P+ VL++ +D+D G NGE ++ + K + + G I V LD E I+ F V+ +D + +++ ++N +I+ + T+S+ G A I E+ P+ T+VAL+Q SDKD E+ VTC L P +D++ ++ L T LD E + + I+ DS N +STN + V + D NDNSP FS + + E G +V A D DSG N +VYSI A F ID +G +R++ LDRE K+ Y+F + A+D G P T T ++ V D NDN S Y F V EN PP +PVG V D D + L D GKF I TG I++ DRE + Y FR A D + S V I V D NDN PV P++S + I LS A + + AED D +A + YS+ LF + G + L + L H+ + L I+ D G P
Sbjct: 26 LYRVHEEQPPSTLIGSLAAD----QGLPDTGH--LYKLEVGAPYLRVDGKTGDIFTTEIPIDRETLKDCRNKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVPENTHMGALFSIPLATDKDTERNGVADYTLTAGPEAVALFGLQVAEDRGEKLPQLIVLGSLDRELKDSYDLTIKAVDGGNPPRYSSALLRVVIADANDNAPKFEKSSYEAE--VAENSPIGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKLLRIDRSSGIIYVKGPLDREE-INNLKFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTHSD-GVANISEDMPVGTAVALVQVSDKDEGENAVVTCV---VAGDVPFQLRPASDSSVDNKRKYFLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVEFAEENQPGEKV-VEVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKDRYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQDMDEGENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVVTKPSNS-SFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIAGGNPHDLFYISPSNGEITLTKELTRKHS---GLHRLVIKVSDRGKP 763
BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 253.832 bits (647), Expect = 6.666e-70 Identity = 237/771 (30.74%), Postives = 363/771 (47.08%), Query Frame = 1
Query: 82 IYRIKEELPITHIIGYLNNDIPKFRSTDSTG------YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN---CFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFIL----VQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQI--KFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAES---LSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTN----ITVDIGDVNDNSPKFSDNIIHMSIKEN--MDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMP--NSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTF 2277
IY I+EEL +IG + D+ +TG Y +++ ++ + +NRIDRE +CP S C ++V + D R++ I+I + D ND++P + + E SR +IP + DPD G N KY L + F L E + Q + Q LDRE K Y + + D G P KS ++V + D+NDN P +F+ ++I IPE PV + V++L +DAD G N E + F + + F L G I V R LD E + IHK AS G + + + I ++D ND P I ++ TN G ++ E P++T +ALI SDKD + V C F E L DN ++ L T+ +LD E K +I+ +DS K S N + V + D NDN P F+ +I +++ EN D TT + A D+DSG+N +VY + + F +D +TGV+ + DRE + + F + A D+G+ L S +V + DENDN + ++F V EN P + VG + TD D + L ++D+ F +D +GVI + DRE Q Y F A D + S+++ V I V DVNDN P+ P N+S + LS G + ++ A D D +A ++Y++V+ SLF +D TG + L+ A D + L + D+G P+ T
Sbjct: 27 IYPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRP-----VFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVL------ASDGSSSPARATITINVTDVNDNAPNIDLRYIISPTN---GTVMLSEKDPINTKIALITVSDKDTDVNGKVIC------FIEKDVPFHLKAVYDN-QYLLETSALLDYEGTKEYIFKIVASDS--GKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTT---ISATDEDSGRNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLS--AIPGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIA---DIGLHRLVVNISDLGYPKSLHTL 766
BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: ENSXETT00000047804.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 277.33 bits (708), Expect = 1.079e-77 Identity = 251/768 (32.68%), Postives = 369/768 (48.05%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF----ILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDN-QTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYL-QRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
+LI L DL L+ PD P+ + Y D+P R ++TG EI + +NRIDRE +C + CF ++V + + R+V IR I+D+ND+SP + + E SR S+P + DPD G NG Y L + F I E + Q + Q LDRE K Y + I D G P++S ++V + D+NDN P +F+ I IPE V + V +L +DAD G N + F F T++AK +F + + +I +++ LD E S HK AS G S + V I I+D ND P I + N G + E PL+T +ALI +DKD + VTC TD+ L P DN +F L TA LD E + I+I+ +DS S + + I D NDN+P F+ +I +S EN GT K + A D DSG+N + Y + P F +D RTG++ + +LDRE ++ Y F ++A D+G+P L + T + V D+NDN + Y F V EN P VG + TD D+ + +L V+ F ID TGVI DRE Q Y F+ A DK S++ V IFVEDVNDN PVF +P+++ + + + G + ++ A D D +A ++YS++ LF++ + +G + L ++ L G H Y L I+ D G P
Sbjct: 58 VLIGNLLKDLNLTLDPDL------STPLQFKLVYKTGDVPLIRVEENTG-EIF-------------------TTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRP-----VFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPYHKLTV------LASDGSSTPSRATVTINITDINDNIPSIDTRYI-INPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDH---DVPFRLKPVFDN-QFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTK-ISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGV---LYKLVIKVNDSGKPE 779
BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: ENSXETT00000047801.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 277.33 bits (708), Expect = 1.357e-77 Identity = 251/768 (32.68%), Postives = 369/768 (48.05%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF----ILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDN-QTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYL-QRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
+LI L DL L+ PD P+ + Y D+P R ++TG EI + +NRIDRE +C + CF ++V + + R+V IR I+D+ND+SP + + E SR S+P + DPD G NG Y L + F I E + Q + Q LDRE K Y + I D G P++S ++V + D+NDN P +F+ I IPE V + V +L +DAD G N + F F T++AK +F + + +I +++ LD E S HK AS G S + V I I+D ND P I + N G + E PL+T +ALI +DKD + VTC TD+ L P DN +F L TA LD E + I+I+ +DS S + + I D NDN+P F+ +I +S EN GT K + A D DSG+N + Y + P F +D RTG++ + +LDRE ++ Y F ++A D+G+P L + T + V D+NDN + Y F V EN P VG + TD D+ + +L V+ F ID TGVI DRE Q Y F+ A DK S++ V IFVEDVNDN PVF +P+++ + + + G + ++ A D D +A ++YS++ LF++ + +G + L ++ L G H Y L I+ D G P
Sbjct: 58 VLIGNLLKDLNLTLDPDL------STPLQFKLVYKTGDVPLIRVEENTG-EIF-------------------TTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRP-----VFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPYHKLTVL------ASDGSSTPSRATVTINITDINDNIPSIDTRYI-INPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDH---DVPFRLKPVFDN-QFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTK-ISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGV---LYKLVIKVNDSGKPE 779
BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: ENSXETT00000047798.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 276.944 bits (707), Expect = 1.405e-77 Identity = 251/768 (32.68%), Postives = 369/768 (48.05%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF----ILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDN-QTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYL-QRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
+LI L DL L+ PD P+ + Y D+P R ++TG EI + +NRIDRE +C + CF ++V + + R+V IR I+D+ND+SP + + E SR S+P + DPD G NG Y L + F I E + Q + Q LDRE K Y + I D G P++S ++V + D+NDN P +F+ I IPE V + V +L +DAD G N + F F T++AK +F + + +I +++ LD E S HK AS G S + V I I+D ND P I + N G + E PL+T +ALI +DKD + VTC TD+ L P DN +F L TA LD E + I+I+ +DS S + + I D NDN+P F+ +I +S EN GT K + A D DSG+N + Y + P F +D RTG++ + +LDRE ++ Y F ++A D+G+P L + T + V D+NDN + Y F V EN P VG + TD D+ + +L V+ F ID TGVI DRE Q Y F+ A DK S++ V IFVEDVNDN PVF +P+++ + + + G + ++ A D D +A ++YS++ LF++ + +G + L ++ L G H Y L I+ D G P
Sbjct: 38 VLIGNLLKDLNLTLDPDL------STPLQFKLVYKTGDVPLIRVEENTG-EIF-------------------TTSNRIDREKLCSGIFTENKCFYEVEVAVLPDEVFRLVKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRP-----VFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPYHKLTVL------ASDGSSTPSRATVTINITDINDNIPSIDTRYI-INPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDH---DVPFRLKPVFDN-QFLLETAAPLDYESTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTK-ISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDADSGENAVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKLLAGDHGV---LYKLVIKVNDSGKPE 759
BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: vapa (VAMP associated protein A [Source:Xenbase;Acc:XB-GENE-990155]) HSP 1 Score: 258.07 bits (658), Expect = 3.851e-71 Identity = 246/789 (31.18%), Postives = 368/789 (46.64%), Query Frame = 1
Query: 25 FILILILFPDLMLSKS--PDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTG------YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN----CFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFIL----VQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAES---LSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNIT----VDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMP--NSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTF 2277
F L+ L L L + + IY I+EELP IG + D+ +TG Y +++ + + + RIDRE +C SS + CF L+V + D R++ I+I + D ND++P + + E SR IP + DPD G NG Y L + F L E + Q + Q LDRE K Y + I D G P KS ++V + D+NDN P +F+ +++ IPE P+ + V++L +DAD G N E + F TS K F L G I V R LD E + +HK V+ D G + + V I ++D ND P I + + G + E P++T +ALI SDKD + V C F E L DN ++ L T+ +LD E K +I+ D+ K S N T V++ D NDN P FS +I +S+ EN G V A D+DSGKN +VY + + F +D +TGV+ + DRE + + F + A D+G+P L S +V V DENDN + ++F V EN P + VG + ATD D + +L ++D+ F +D +G+I + DRE Q Y F A D S+++ V I + D NDN PV P N+S + LS G + ++ A D D +A ++Y++V+ LF +D TG + L+ + A D + L + D+G P+ T
Sbjct: 6 FYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGSSTSLVYRLVSKAGDSPLVKVSSSTGEIFTTSTRIDREKLCAGSSNSDENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSTVINISIPENTLINSRFPIPSAVDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNKP-----VFKESQVEVHIPENAPIGTSVVQLHATDADIGSNAEIKYIFGAQVTSATKRLFALNNTTGLITVQRPLDREETAVHKL--TVLATD----GSSTPARATVTINVTDVNDNPPNIDLRYI-ISPINGTVYLSEKDPINTKIALITVSDKDTDVNSKVIC------FIEREVPFHLKAVYDN-QYLLETSSLLDYEGIKEFSFKIVAADT--GKPSLNQTALVRVELEDENDNPPIFSQPVIELSVSENNRRGLYLTT-VSASDEDSGKNSDIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITATDSDAGENKAVTLSILNDNENFVLDPYSGLIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINIMDANDNSPVVISPPSNTSFKLVPLS--AIPGSVVAEVFAVDTDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLE---EKPSAADVGLHRLVVNISDLGYPKPLHTL 767
BLAST of Protocadherin 1 vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 253.062 bits (645), Expect = 2.619e-69 Identity = 239/786 (30.41%), Postives = 365/786 (46.44%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTD------RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL---ESSTDTFILV-----QEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCT-TDNFGFA-ESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTST--NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI---PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLD---IEACDMGTP-RMCTTFRGFKIN 2295
F+ + P +L S YR+ EE P +IG L +D S E+ +P + V D +++ S++ RE CF+ +V++ TD R++ +IEI D+ND++PN+ + E + G IP + D D G NG Y L + D F L E L + LDRE + Y LTI D G P+++ + + ILD NDN P+F + +PE P+ VL++ +D+D G N E +SF ++ + L + G I V +D E + F V+ KD + ++ + I +++N +I+ + + T+ + G A I E+ P+ T VAL+Q SD D + VTC + F + +S T ++ ++ L T LD E K I I+ DS N S+ ++ V + DVNDN+P FS +++ + EN D +V A D DSG N + YSI P+ F+I+ +G IR LDRE + Y F +VA D G P L T + ++ V D NDN + Y F V EN P +PVG V D D + L +SG+F I TG I++ DRE Q Y FR A D + S V I V D NDN PV +P S+++ L+ + G + + AED D +A + YS+ + LF + + G + L++++ R HY L ++ D G P R T F IN
Sbjct: 53 FLWLFFQLP--ILGSSTKVAYRVPEEQPPNILIGSLASDYGYPDSKHLYKLELGHPYLR-VDGKTGDIYTTETSIDRESLRECQNLEPGEKCFLEFEVSM--TDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENTNIGMLFPIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAE--LPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDRED-VGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTH-QGGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFLQTTTALDYESVKEYTIEIVAVDSGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLV-MEVSATDADSGPNSQLHYSILPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVP-SNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAI------IRKHYGLHRLVVKVTDKGKPSRHGTALVHFYIN 821
BLAST of Protocadherin 1 vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 271.937 bits (694), Expect = 6.115e-76 Identity = 247/767 (32.20%), Postives = 366/767 (47.72%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN--CFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI-IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+LI L DL LS PD P+ + Y D+P R + TG EI + RIDRE +C ++ CF ++V + + R+V IR I+D+ND++P + + E SR S+P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P F I + ++ IPE P+ S V +L +DAD G+N F FS ++IAK F L G I V LD E S HK V+ D G + + V + ++D ND P I + N G ++ EN PL+T +ALI DKD + + VTC TD+ L P +N+F L TA LD E + I+++ D+ S+ + + + D NDN+P F+ + I +S+ EN G K + A D DSG+N + Y + D P F +D RTG++ + +LDRE + Y F ++A D+G P L S T V V D+NDN I + Y F V E+ P + VG + TD D N + S+ V+D +F ID +GVI DRE Q Y F A D S+++ V I V DVNDN P+F P S+ + + G + K+VA D D +A + YS+V LF +++ +G + L+ + D + + ++A D+G P
Sbjct: 38 VLIGDLLKDLNLSLIPDKSLTT----PMQFKLVYKTGDVPLIRIEEGTG-EIF-------------------TTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF---IEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKL--LVLATD----GGSTPARATVLVNVTDINDNVPSIDIRYI-VNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDH---EVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTK-ISATDADSGQNAEISYML-GFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVND--QFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLK---EKCMVSDLGLHRVIVKANDLGQP 759
BLAST of Protocadherin 1 vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 270.781 bits (691), Expect = 3.681e-75 Identity = 247/767 (32.20%), Postives = 366/767 (47.72%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN--CFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI-IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+LI L DL LS PD P+ + Y D+P R + TG EI + RIDRE +C ++ CF ++V + + R+V IR I+D+ND++P + + E SR S+P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P F I + ++ IPE P+ S V +L +DAD G+N F FS ++IAK F L G I V LD E S HK V+ D G + + V + ++D ND P I + N G ++ EN PL+T +ALI DKD + + VTC TD+ L P +N+F L TA LD E + I+++ D+ S+ + + + D NDN+P F+ + I +S+ EN G K + A D DSG+N + Y + D P F +D RTG++ + +LDRE + Y F ++A D+G P L S T V V D+NDN I + Y F V E+ P + VG + TD D N + S+ V+D +F ID +GVI DRE Q Y F A D S+++ V I V DVNDN P+F P S+ + + G + K+VA D D +A + YS+V LF +++ +G + L+ + D + + ++A D+G P
Sbjct: 38 VLIGDLLKDLNLSLIPDKSLTT----PMQFKLVYKTGDVPLIRIEEGTG-EIF-------------------TTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF---IEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKL--LVLATD----GGSTPARATVLVNVTDINDNVPSIDIRYI-VNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDH---EVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTK-ISATDADSGQNAEISYML-GFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVND--QFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLK---EKCMVSDLGLHRVIVKANDLGQP 759
BLAST of Protocadherin 1 vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 270.781 bits (691), Expect = 1.043e-74 Identity = 247/767 (32.20%), Postives = 366/767 (47.72%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN--CFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI-IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+LI L DL LS PD P+ + Y D+P R + TG EI + RIDRE +C ++ CF ++V + + R+V IR I+D+ND++P + + E SR S+P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P F I + ++ IPE P+ S V +L +DAD G+N F FS ++IAK F L G I V LD E S HK V+ D G + + V + ++D ND P I + N G ++ EN PL+T +ALI DKD + + VTC TD+ L P +N+F L TA LD E + I+++ D+ S+ + + + D NDN+P F+ + I +S+ EN G K + A D DSG+N + Y + D P F +D RTG++ + +LDRE + Y F ++A D+G P L S T V V D+NDN I + Y F V E+ P + VG + TD D N + S+ V+D +F ID +GVI DRE Q Y F A D S+++ V I V DVNDN P+F P S+ + + G + K+VA D D +A + YS+V LF +++ +G + L+ + D + + ++A D+G P
Sbjct: 38 VLIGDLLKDLNLSLIPDKSLTT----PMQFKLVYKTGDVPLIRIEEGTG-EIF-------------------TTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF---IEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKL--LVLATD----GGSTPARATVLVNVTDINDNVPSIDIRYI-VNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDH---EVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTK-ISATDADSGQNAEISYML-GFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVND--QFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLK---EKCMVSDLGLHRVIVKANDLGQP 759
BLAST of Protocadherin 1 vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 270.396 bits (690), Expect = 1.496e-74 Identity = 247/767 (32.20%), Postives = 366/767 (47.72%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN--CFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI-IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+LI L DL LS PD P+ + Y D+P R + TG EI + RIDRE +C ++ CF ++V + + R+V IR I+D+ND++P + + E SR S+P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P F I + ++ IPE P+ S V +L +DAD G+N F FS ++IAK F L G I V LD E S HK V+ D G + + V + ++D ND P I + N G ++ EN PL+T +ALI DKD + + VTC TD+ L P +N+F L TA LD E + I+++ D+ S+ + + + D NDN+P F+ + I +S+ EN G K + A D DSG+N + Y + D P F +D RTG++ + +LDRE + Y F ++A D+G P L S T V V D+NDN I + Y F V E+ P + VG + TD D N + S+ V+D +F ID +GVI DRE Q Y F A D S+++ V I V DVNDN P+F P S+ + + G + K+VA D D +A + YS+V LF +++ +G + L+ + D + + ++A D+G P
Sbjct: 38 VLIGDLLKDLNLSLIPDKSLTT----PMQFKLVYKTGDVPLIRIEEGTG-EIF-------------------TTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF---IEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKL--LVLATD----GGSTPARATVLVNVTDINDNVPSIDIRYI-VNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDH---EVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTK-ISATDADSGQNAEISYML-GFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVND--QFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLK---EKCMVSDLGLHRVIVKANDLGQP 759
BLAST of Protocadherin 1 vs. Ensembl Mouse
Match: Pcdh11x (protocadherin 11 X-linked [Source:MGI Symbol;Acc:MGI:2442849]) HSP 1 Score: 270.396 bits (690), Expect = 1.602e-74 Identity = 247/767 (32.20%), Postives = 366/767 (47.72%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN--CFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI-IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+LI L DL LS PD P+ + Y D+P R + TG EI + RIDRE +C ++ CF ++V + + R+V IR I+D+ND++P + + E SR S+P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P F I + ++ IPE P+ S V +L +DAD G+N F FS ++IAK F L G I V LD E S HK V+ D G + + V + ++D ND P I + N G ++ EN PL+T +ALI DKD + + VTC TD+ L P +N+F L TA LD E + I+++ D+ S+ + + + D NDN+P F+ + I +S+ EN G K + A D DSG+N + Y + D P F +D RTG++ + +LDRE + Y F ++A D+G P L S T V V D+NDN I + Y F V E+ P + VG + TD D N + S+ V+D +F ID +GVI DRE Q Y F A D S+++ V I V DVNDN P+F P S+ + + G + K+VA D D +A + YS+V LF +++ +G + L+ + D + + ++A D+G P
Sbjct: 38 VLIGDLLKDLNLSLIPDKSLTT----PMQFKLVYKTGDVPLIRIEEGTG-EIF-------------------TTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPIF---IEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREESPSHKL--LVLATD----GGSTPARATVLVNVTDINDNVPSIDIRYI-VNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDH---EVPFRLRPVF-SNQFLLETAAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTK-ISATDADSGQNAEISYML-GFDAPPEFNLDQRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHGTVGLITVTDPDYGENSAVTLSILDVND--QFTIDPQSGVIRPNISFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPSTNPGTVVFKVVAIDDDIGMNAEVLYSIVGGNTKGLFMIEQTSGNITLK---EKCMVSDLGLHRVIVKANDLGQP 759
BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q9BZA7|PC11X_HUMAN (Protocadherin-11 X-linked OS=Homo sapiens OX=9606 GN=PCDH11X PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.714e-76 Identity = 262/866 (30.25%), Postives = 417/866 (48.15%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNND-----IPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP--TSSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDL-------------TKTKGQPNLLI-DSSGMSENIIIALITFLL--FMIMVTIFIIFLLRRKSRNNLK-PRKESQN 2490
+I ++L + S + + Y I+EE+P +IG L D IP T + ++++ I + + RIDRE +C +CF ++V + + R+V IR I+D+ND++P + + E S+ ++P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P +F+ T+I IPE PV + V +L +DAD G+N + FSFS ++IA+ F + +I +++ LD E + K+++ AS G + + V + ++D ND P I + N ++ EN PL+T +ALI +DKD + VTC TD+ L P +N+F L TA LD E K I+++ D+ S + + + D NDN+P F+ + + +SI EN G K V A+D DSG N + Y + D P F++D RTG++ +LDRE ++ Y F I+A D+G P L+S VT V + D+NDN + + Y F V EN P + VG + TD D +L + ++ F ID TGVI DRE Q Y F A D S+S+ V I V DVNDN PVF +P S+ + + G + +++A D D +A ++YS+V LF++D++TG + L D D + + ++A D+G P + F +N+ N + T+ PN I D S + + + L+ + ++V IFI ++R + +LK +K QN
Sbjct: 8 YIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP-----VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDRE---ETPNHKLLVL--ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI-VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDH---EIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTK-VSAMDADSGPNAKINYLL-GPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCD---VTDLGLHRVLVKANDLGQPD--SLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQN 851
BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 9.548e-76 Identity = 262/866 (30.25%), Postives = 416/866 (48.04%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNND-----IPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP--TSSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDL-------------TKTKGQPNLLI-DSSGMSENIIIALITFLL--FMIMVTIFIIFLLRRKSRNNLK-PRKESQN 2490
+I ++L + S + + Y I+EE+P +IG L D IP T + ++++ I + + RIDRE +C +CF ++V + + R+V IR I+D+ND++P + + E S+ ++P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P +F+ T+I IPE PV + V +L +DAD G+N + FSFS ++IA+ F + +I +++ LD E + K+++ AS G + + V + ++D ND P I + N ++ EN PL+T +ALI +DKD + VTC TD+ L P +N+F L TA LD E K I+++ D+ S + + + D NDN+P F+ + + +SI EN G K V A D DSG N + Y + D P F++D RTG++ +LDRE ++ Y F I+A D+G P L+S VT V + D+NDN + + Y F V EN P + VG + TD D +L + ++ F ID TGVI DRE Q Y F A D S+S+ V I V DVNDN PVF +P S+ + + G + +++A D D +A ++YS+V LF++D++TG + L D D + + ++A D+G P + F +N+ N + T+ PN I D S + + + L+ + ++V IFI ++R + +LK +K QN
Sbjct: 8 YIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP-----VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDRE---ETPNHKLLVL--ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI-VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDH---EIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTK-VSATDADSGPNAEINYLL-GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCD---VTDLGLHRVLVKANDLGQPD--SLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQN 851
BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q6WXV7|PC11X_PONPY (Protocadherin-11 X-linked OS=Pongo pygmaeus OX=9600 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.344e-75 Identity = 241/771 (31.26%), Postives = 378/771 (49.03%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNND-----IPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP--TSSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP-FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+I ++L + S + + Y I+EE+P +IG L D IP T + ++++ I + + RIDRE +C +CF ++V + + R+V IR I+D+ND++P + + E S+ ++P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P +F+ T+I IPE PV + V +L +DAD G+N + FSFS ++IA+ F + +I +++ LD E + K+++ AS G + + V + ++D ND P I + N ++ EN PL+T +ALI +DKD + VTC TD+ L P +N+F L TA LD E K I+++ D+ S + + + D NDN+P F+ + + +SI EN G K V A D DSG N + Y + P F++D RTG++ +LDRE ++ Y F I+A D+G P L+S VT V + D+NDN + + Y F V EN P + VG + TD D +L + ++ F ID TGVI DRE Q Y F A D S+S+ V I V DVNDN PVF +P S+ + + G + +++A D D +A ++YS+V LF++D++TG + L D D + + ++A D+G P
Sbjct: 8 YIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLTRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP-----VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDRE---ETPNHKLLVL--ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI-VNPINDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDH---EIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTK-VSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCD---VTDLGLHRVLVKANDLGQP 759
BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.448e-75 Identity = 262/866 (30.25%), Postives = 416/866 (48.04%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNND-----IPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP--TSSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDL-------------TKTKGQPNLLI-DSSGMSENIIIALITFLL--FMIMVTIFIIFLLRRKSRNNLK-PRKESQN 2490
+I ++L + S + + Y I+EE+P +IG L D IP T + ++++ I + + RIDRE +C +CF ++V + + R+V IR I+D+ND++P + + E S+ ++P + DPD G NG Y L S + F ++ G + L K+LDRE K Y + + D G P +S ++V + D NDN P +F+ T+I IPE PV + V +L +DAD G+N + FSFS ++IA+ F + +I +++ LD E + K+++ AS G + + V + ++D ND P I + N ++ EN PL+T +ALI +DKD + VTC TD+ L P +N+F L TA LD E K I+++ D+ S + + + D NDN+P F+ + + +SI EN G K V A D DSG N + Y + D P F++D RTG++ +LDRE ++ Y F I+A D+G P L+S VT V + D+NDN + + Y F V EN P + VG + TD D +L + ++ F ID TGVI DRE Q Y F A D S+S+ V I V DVNDN PVF +P S+ + + G + +++A D D +A ++YS+V LF++D++TG + L D D + + ++A D+G P + F +N+ N + T+ PN I D S + + + L+ + ++V IFI ++R + +LK +K QN
Sbjct: 8 YIFAVLLACVVFHSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHCFYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHP-----VFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDRE---ETPNHKLLVL--ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYI-VNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDH---EIPFRLRPVF-SNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTK-VSATDADSGPNAEINYLL-GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCD---VTDLGLHRVLVKANDLGQPD--SLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVSSPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQAPHLKAAQKNKQN 851
BLAST of Protocadherin 1 vs. UniProt/SwissProt
Match: sp|Q6KEQ9|PC11X_PIG (Protocadherin-11 X-linked OS=Sus scrofa OX=9823 GN=PCDH11X PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 1.655e-75 Identity = 247/769 (32.12%), Postives = 369/769 (47.98%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN--CFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF---ILVQEHGLYLQTL---KQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+LI L DL LS PD P+ + Y D+P R + TG EI + RIDRE +C ++ CF ++V + + R+V IR I+D+ND++P + + E SR ++P + DPD G NG Y L F ++ G + L K+LDRE K Y + I D G P +S ++V + D NDN P +F+ +I IPE PV S V +L +DAD G+N + F FS +++AK F L G I + LD E S HK +++ AS G + + V + ++D ND P I + N G ++ EN PL+T +ALI +DKD + V+C TD+ L P +N+F L TA LD E + I+++ D+ S+ + + + D NDN+P F+ + +S+ EN GT K + A+D DSG+N + Y + D P F +D RTG++ + +LDRE + Y F ++A D+G P L + T LV V D+NDN + + Y F V EN P + VG + TD D N + S+ +D F ID TGVI DRE Q Y F A D S+++ V I V DVNDN PVF +P+S+ + + G + +VA D D +A ++YS+V LF +D+ +G + L+ A D + L ++A D+G P
Sbjct: 38 VLIGDLLKDLNLSLIPDRSLTT----PMQFKLVYKTGDVPLIRIEEGTG-EIF-------------------TTGARIDREKLCAGIVVDAHCFYEVEVAVLPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPATIDPDTGINGVQNYHLIKGQSIFGLDVIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAILQVSVADTNDNRP-----VFKENEIEVSIPENAPVGSSVTQLHATDADIGENAKIHFYFSNLISNMAKKLFHLNSTTGLITIKEPLDREESPNHKL---LVL---ASDGGLTPARAMVLVNVTDINDNIPSIDIRYI-INPINGTVVLSENAPLNTKIALITVTDKDADHNGWVSCFTDH---EVPFRLRPVF-SNQFLLETAAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFLSLSVPENNSPGTQLTK-ISAMDADSGRNAEINYLL-GFDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGENSAVILSILDANDD--FTIDPQTGVIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVTINVVDVNDNKPVFVVPSSNYSFELVPPSTNPGTVVFTVVAIDNDTGMNAELRYSMVGGNTKGLFIIDQTSGNITLKEKCVFA---DLGLHRLVVKAKDLGQP 759
BLAST of Protocadherin 1 vs. TrEMBL
Match: A0A4S2LQP7 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_005535 PE=4 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 2.645e-108 Identity = 324/1068 (30.34%), Postives = 460/1068 (43.07%), Query Frame = 1
Query: 76 DHIYRIKEELPITHIIGYLNNDIPKFRST---------------DSTG----YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSS------------------------------INCFIILKVTLHGT-----------------DRIVTIRIEIDDVNDHSPNW--KINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL------ESSTDTFILVQE--HGLYLQTLKQLDREHKSGYKLTIISTDRG------IPSKSGR----LEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNG------EXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYE-----------------------------SGIH-----KFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSE---------TG---FAIIDENKPLSTSVALIQASDKDFKESDTVTC--TTDNFGFAESLSLTPTNDNN---------EFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQ-----------------VKAIDKDSGKNGFVVYSIPAHDI---PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-------------KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDH--------------------------YSLDIEACDMGT-PRM-CTTFRGFKINI---------------------------------QRNGDLTKTKGQPNLLIDSSG-----------------MSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKESQN 2490
+H YRI EELPI IG L D+ ++S D G + +LN GV N + +L V RIDRE +CP S +C I LK+++ I+T+R+ IDD+ND++P W + + +V+F +G+ AG R+++P + D D G NG++ Y L + ++TF L+ G+YL KQ+DRE + Y+ + + DR +PS+ R L ++V I DINDNTP F IF P +PET PV + VL L +DADAG NG ++ P E AK YF ++ +G+I+V R LD + SG+ KF F V+++D A Y RSSE+ V I +SDENDE P ++ +R + E TG F + ENKP+ T+VA +QA D DF+ +D V C T NF L +N N + L TA LDRE+ + I C D+ H T N +V + D NDN P+F N HM + ENM GT + A+D D+G N V Y + + I F ID +TG I + DRE + Y +A DHG P L+ST T + + D NDN + Y F + EN P T VG+V ATD D+ I Y + SD+ F ID+ TG+I + LDRE Q +Y F A D + + V + ++D NDN P+F PNS+ N+++++ E G L I A D DD E+A I YS+ + + LF LD TG LYL G D D + L +EACD G P+ CT F KI I R +L + + + SSG ++E III L + ++ TI ++ L+RR+S KE +N
Sbjct: 28 EHEYRIPEELPIGSQIGNLMEDLLLYKSQSLLFGKSQADTQSKKDGWGELFEFSVLNSGHTGV-NAVEVTKDGRLLVARRIDREQLCPGSQSVGSPLDSVYSMKYVSKLTSQGSHSSTASSSHCIITLKMSVFSGAAKIKVSGVKSSKADNPQAILTVRLLIDDINDNAPYWPGHLKRFQVVFRDGDLAGERRTLPPAADLDAGLNGRLSYELVPTTHSDKGSETFSLIDHAMEGIYLCATKQIDREEREAYQYILKAIDRSNPENDQMPSEESRFTSTLVIDVHIEDINDNTPLFVQPIFTPNAPVPETTPVGTTVLILNATDADAGINGAFHFGFSREHAWLPIEI-YAKQYFDIRSNGQIVVRRPLDVDRDRSTQEIFRQEQRNGVQGHSSSGATFLSSGLASGTTIKFRFHVVVEDEAVRPYSRSSEATVVITVSDENDEAPIVEIREVREDIEQKTNGVPGPTGNFNFLSVMENKPIGTAVATLQAYDPDFEGTDHVECRLKTPNFSL-----LQTSNQQNPILMVSGAVTYHLQTATELDREVTPVQLVPISCIDTAGHLTERNFSVYVLDENDNPPRFVHNTFHMQVWENMSPGTQLQRMESVQSSIHSNLLYHHPYFTAVDSDTGANADVFYQLIENGINATTFKIDPKTGTITTAVSFDREAVDHYTLYALAIDHGIPPLTSTSTVKITILDVNDNAPQFGSVEYTFHLAENQPRATQVGQVTATDLDSDIYGPIHYFVGDESDATNFRIDKMTGIIRCRQALDREKQARYVFTVLAKDTNVHSSNSKSLSSLQLTGTCTVTVLIDDENDNWPIFVNPNSTANTLAVAVDETLGHKLAYIQATDADDGENALITYSIRSGNTNGLFGLDSTTGLLYLSGLFRGTSMSDHDSRTKNVTVNLAGDTRVDMSPALVGPSFHMLTLEACDQGKHPKQKCTLFSNLKILINNRLDGEVDAMENDNQSGQISDSGLRRKEKAVQSRRNELVASAANGHTVGTSSGSMAYGMFATTRATGRYSINEIIIICLSVLFISVLAATILLVCLIRRRSLGYFSREKEIEN 1088
BLAST of Protocadherin 1 vs. TrEMBL
Match: A0A3R7HBN6 (Protocadherin-11 X-linked (Fragment) OS=Clonorchis sinensis OX=79923 GN=PCDH11X PE=4 SV=1) HSP 1 Score: 369.777 bits (948), Expect = 3.516e-106 Identity = 322/1065 (30.23%), Postives = 461/1065 (43.29%), Query Frame = 1
Query: 76 DHIYRIKEELPITHIIGYLNNDIPKFRST---------------DSTG----YEILNPRDKGVQNFILDPISSKLSVNNRIDREAIC--------PTSSI----------------------NCFIILKVTLHGT-----------------DRIVTIRIEIDDVNDHSPNW--KINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST------DTFILVQE--HGLYLQTLKQLDREHKSGYKLTIISTDRG------IPSKSGR----LEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNG------EXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYE--------------SGIH--------------------KFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSE---------TG---FAIIDENKPLSTSVALIQASDKDFKESDTVTC--TTDNFGFAES------LSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQ-----------------VKAIDKDSGKNGFVVYSIPAHDI---PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-------------KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDH--------------------------YSLDIEACDMGT-PRM-CTTFRGFKINI---------------------------------QRNGDLTKTKGQPNLLIDSSG-----------------MSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKESQN 2490
+H YRI+EELPI IG L D+ ++S D G + +LN GV N + ++ V RIDRE +C P S+ +C I LK+++ I+T+R+ IDD+ND++P W + + +V+F +G+ G R+++P + D D G NG++ Y L +T TF L+ G+YL KQ+DRE + Y+ + + D +PS+ R L ++V I DINDNTP F IF P IPET PV + VL L +DADAG NG ++ PTE AK YF ++ +G I+V R LD + +G+ KF F V+++D A Y RSSE+ V I +SDENDE P ++ +R + E TG F + ENKP+ T+VA +QA D DF+ +D V C T NF ++ + + P + + L TA LDRE+ + I C D+ H T N +V + D NDN P+F N HM + ENM GT + A+D D+G N V Y + + + F ID +TG I + DRE + Y +A DHG P L+ST T + V D NDN + Y F + EN P T VG+V ATD D+ I Y + SD+ F ID+ TGVI + LDRE Q +Y F A D + + V + ++D NDN PVF PNS+ N+++++ E G L I A D DD E+A I YS+ + + LF LD TG LYL G D D + L +EACD G P+ CT F KI I R +L + + + SSG ++E III L + ++ TI ++ L+RR+S KE ++
Sbjct: 29 EHEYRIQEELPIGSQIGNLMEDLLLYKSQSLLFGKSQAELQSKKDDWGDLFEFSVLNSGHLGV-NSVEVKKDGRVLVARRIDREQLCLGSQSVGSPLDSVYSVKFVPKLTSQGSHSSMASSSHCIITLKLSVFSRAAQTKITGIKSSKADNPQAILTVRLLIDDINDNAPYWPGHLKRFQVVFRDGDPIGERRTLPPAVDLDSGLNGRLIYELVPTTHSDKNSGTFSLIDHAMEGIYLCATKQVDREEREAYQYILKAIDHSNPDDDQMPSEESRFTSTLVIDVHIEDINDNTPLFVQPIFTPNTPIPETTPVGTTVLILNATDADAGINGAFHFGFSREHAWLPTEI-YAKQYFDIRSNGHIVVRRSLDVDRDKGTPEIFRQEQRNGVQGLSSSGATFLSSSLASGTTIKFRFHVVVEDEAVRPYSRSSEATVVITVSDENDEAPIVEIREVREDIEQKANGVSGPTGNFNFLSVTENKPIGTAVATLQAYDPDFEGTDHVECRLKTSNFSLVQTSNQQNPIMMVP--GSVAYHLQTAIELDREVTPVQLVPISCIDTAGHLTERNFSVYVLDENDNPPRFVHNTFHMQVWENMSPGTQLQRMENVQSSVHSNLLYHHPYFTAVDSDTGANADVFYQLIENGMNATTFKIDPKTGTITTTVSFDREAVDHYTLYALAIDHGIPPLTSTSTVKITVLDVNDNAPQFGSVEYTFHLAENQPRATQVGQVTATDLDSDIYGPIHYFVGDESDATNFRIDKMTGVIRCRQALDREKQARYVFTVLAKDTNVHSSNSKSLSSLQLTGTCTVTVLIDDENDNWPVFVNPNSTANTLAVAVDETLGHKLAYIQATDADDGENALITYSIRSGNTNGLFGLDSTTGLLYLSGLFRGTSTSDHDSLTKNVTVNLAGDTRVDVSPALAGPSFHMLTLEACDQGKHPKQKCTLFSNLKILINNRLDGDVDTMENDSQGGQISDSGLRRKEKAIQSRRNELMASAANGHTVGTSSGSMAYGMFANTRATGRYSINEIIIICLSVLFISVLAATILLVCLIRRRSLGYFSREKEVED 1089
BLAST of Protocadherin 1 vs. TrEMBL
Match: A0A1S8WYQ4 (Cadherin domain protein (Fragment) OS=Opisthorchis viverrini OX=6198 GN=X801_04596 PE=4 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 2.034e-104 Identity = 324/1060 (30.57%), Postives = 457/1060 (43.11%), Query Frame = 1
Query: 76 DHIYRIKEELPITHIIGYLNNDIPKFRS---------TDSTG----------YEILNPRDKGVQNFILDPISSKLSVNNRIDREAIC--------PTSSI----------------------NCFIILKVTL-------HGT----------DRIVTIRIEIDDVNDHSPNW--KINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST------DTFILVQE--HGLYLQTLKQLDREHKSGYKLTIISTDRG------IPSKSGR----LEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNG------EXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYE--------------SGIH--------------------KFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSE---------TG---FAIIDENKPLSTSVALIQASDKDFKESDTVTC--TTDNFGFAESL----SLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQ-----------------VKAIDKDSGKNGFVVYSI---PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-------------KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDH--------------------------YSLDIEACDMGT-PRM-CTTFRGFKINI---------------------------------QRNGDLTKTKGQPNLLIDSSG-----------------MSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKE 2481
+H YRI+EELPI IG L D+ ++S TD + +LN GV N + ++ V RIDRE +C P SI +C I LK+++ GT +T+R+ IDD+ND++P W + + +V+F +G+ G R+++P + D D G NG++ Y L +T TF LV G+YL KQ+DRE + Y+ + + DRG IP + R L ++V I D+NDNTP F IF P IPET PV + VL L +DADAG NG ++ PTE AK YF ++ +G I+V R LD + +G+ KF F V+++D A Y RSSE+ V I +SDENDE P I+ + + E TG F + ENKP+ T+VA +QA D DF+ +D V C T NF ++ S+ + L TA LDRE+ + I C D+ H T N +V + D NDN P+F N HM + ENM GT + A+D D+G N V Y + + F ID +TG I + DRE + Y +A DHG P L+ST T + V D NDN ++ Y F + EN P T VG+V ATD D+ I Y + SD+ F +D+ TGVI + LDRE Q +Y F A D + + V + ++D NDN PVF PNS+ N+++++ E G L I A D DD E+A I YS+ + + LF LD TG LYL G D D + L +EACD G P+ CT F KI I R +L + + + SSG ++E III L + ++ TI ++ L+R +S KE
Sbjct: 16 EHEYRIQEELPIGSQIGNLMEDLSLYKSQSLLFGKSQTDIQSKKDDWRELFEFSVLNSGQMGV-NAVEVTKDGRVLVARRIDREQLCLGSQSVGSPLDSIYSVKYVSKLTSQGSHSSMTSSSHCTITLKLSVFSRAIQTKGTGVKSSKTDNPQAHLTVRLLIDDINDNAPYWPGHLKRFQVVFRDGDPVGERRTLPPAVDLDSGLNGRLIYELVPTTRSDKNPGTFSLVDHAMEGIYLCATKQVDREEREAYQYILKAIDRGNPDDGHIPPEESRFTSTLVIDVHIEDVNDNTPLFVQPIFTPNTPIPETTPVGTTVLVLNATDADAGINGAFHFGFSREHAWLPTEI-YAKQYFDIRSNGHIVVRRPLDVDRDKGNQEIFRQEQRNGVQGLSSPGAIFLSSNLASSTAIKFRFHVVVEDEAVRPYSRSSEAAVVITVSDENDEAPIIEIREVTEDIEQKAHGVSGPTGNFNFLSVTENKPIGTAVATLQAYDPDFEGTDHVECRLKTPNFSLLQTSNQQNSILMMTGAVTYHLQTAIELDREVTPVQLVPISCIDTAGHLTERNFSVYVLDENDNPPRFVHNTFHMQVWENMSPGTQLQRMESAQSSVHSNLLYHHPYFTAVDSDTGANADVFYQLIEDGMNATTFKIDQKTGTITTTVSFDREAVDHYTLYALAIDHGIPPLTSTSTVKITVLDVNDNAPQFGSAEYTFHLAENQPRATQVGQVTATDLDSDIYGPIHYFVGDESDATNFRVDKMTGVIRCRQALDREKQARYVFTVLAKDTSVHSSNSKSLSSLQLTGTCKVTVLIDDENDNWPVFVNPNSTANTLAVAVDETLGHKLAYIQATDADDGENALITYSIRSGNTNGLFGLDSTTGLLYLSGLFRGTSMSDHDSLTKNVTVNLAGDTRVDVSPALVGPSFHMLTLEACDQGKHPKQKCTLFSNLKILINNRLDGEVDAMENDSHSGQISDSVLRRKEKAVQSRRNELLSSAASGHTVGTSSGSMAYGMLATSRATGRYSINEIIIICLSVLFISVLAATILLVCLIRHRSLGYFSREKE 1073
BLAST of Protocadherin 1 vs. TrEMBL
Match: G7Y8R9 (Protocadherin-11 X-linked OS=Clonorchis sinensis OX=79923 GN=CLF_102916 PE=4 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 3.231e-104 Identity = 321/1065 (30.14%), Postives = 461/1065 (43.29%), Query Frame = 1
Query: 76 DHIYRIKEELPITHIIGYLNNDIPKFRST---------------DSTG----YEILNPRDKGVQNFILDPISSKLSVNNRIDREAIC--------PTSSI----------------------NCFIILKVTLHGT-----------------DRIVTIRIEIDDVNDHSPNW--KINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL------ESSTDTFILVQE--HGLYLQTLKQLDREHKSGYKLTIISTDRG------IPSKSGR----LEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNG------EXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYE--------------SGIH--------------------KFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSE---------TG---FAIIDENKPLSTSVALIQASDKDFKESDTVTC--TTDNFGFAES------LSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQ-----------------VKAIDKDSGKNGFVVYSIPAHDI---PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-------------KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDH--------------------------YSLDIEACDMGT-PRM-CTTFRGFKINI---------------------------------QRNGDLTKTKGQPNLLIDSSG-----------------MSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKESQN 2490
+H YRI+EELPI IG L D+ ++S D G + +LN GV N + ++ V RIDRE +C P S+ +C I LK+++ I+T+R+ IDD+ND++P W + + +V+F +G+ G R+++P + D D G NG++ Y L + ++ TF L+ G+YL KQ+DRE + Y+ + + D +PS+ R L ++V I DINDNTP F IF P IPET PV + VL L +DADAG NG ++ PTE AK YF ++ +G I+V R LD + +G+ KF F V+++D A Y RSSE+ V I +SDENDE P ++ +R + E TG F + ENKP+ T+VA +QA D DF+ +D V C T NF ++ + + P + + L TA LDRE+ + I C D+ H T N +V + D NDN P+F N HM + ENM GT + A+D D+G N V Y + + + F ID +TG I + DRE + Y +A DHG P L+ST T + V D NDN + Y F + EN P T VG+V ATD D+ I Y + SD+ F ID+ TGVI + LDRE Q +Y F A D + + V + ++D NDN PVF PNS+ N+++++ E G L I A D DD E+A I YS+ + + LF LD TG LYL G D D + L +EACD G P+ CT F KI I R +L + + SSG ++E III L + ++ TI ++ L+RR+S KE ++
Sbjct: 29 EHEYRIQEELPIGSQIGNLMEDLLLYKSQSLLFGKSQAELQSKKDDWGDLFEFSVLNSGHLGV-NSVEVKKDGRVLVARRIDREQLCLGSQSVGSPLDSVYSVKFVPKLTSQGSHSSMASSSHCIITLKLSVFSRAAQTKITGIKSSKADNPQAILTVRLLIDDINDNAPYWPGHLKRFQVVFRDGDPIGERRTLPPAVDLDSGLNGRLIYELVPTTHSDKNSGTFSLIDHAMEGIYLCATKQVDREEREAYQYILKAIDHSNPDDDQMPSEESRFTSTLVIDVHIEDINDNTPLFVQPIFTPNTPIPETTPVGTTVLILNATDADAGINGAFHFGFSREHAWLPTEI-YAKQYFDIRSNGHIVVRRSLDVDRDKGTPEIFRQEQRNGVQGLSSSGATFLSSSLASGTTIKFRFHVVVEDEAVRPYSRSSEATVVITVSDENDEAPIVEIREVREDIEQKANGVSGPTGNFNFLSVTENKPIGTAVATLQAYDPDFEGTDHVECRLKTSNFSLVQTSNQQNPIMMVP--GSVAYHLQTAIELDREVTPVQLVPISCIDTAGHLTERNFSVYVLDENDNPPRFVHNTFHMQVWENMSPGTQLQRMENVQSSVHSNLLYHHPYFTAVDSDTGANADVFYQLIENGMNATTFKIDPKTGTITTTVSFDREAVDHYTLYALAIDHGIPPLTSTSTVKITVLDVNDNAPQFGSVEYTFHLAENQPRATQVGQVTATDLDSDIYGPIHYFVGDESDATNFRIDKMTGVIRCRQALDREKQARYVFTVLAKDTNVHSSNSKSLSSLQLTGTCTVTVLIDDENDNWPVFVNPNSTANTLAVAVDETLGHKLAYIQATDADDGENALITYSIRSGNTNGLFGLDSTTGLLYLSGLFRGTSTSDHDSLTKNVTVNLAGDTRVDVSPALAGPSFHMLTLEACDQGKHPKQKCTLFSNLKILINNRLDGDVDTMENDSQGGQISDSGLRRKEKAIQSRRNELMASAANGYTVGTSSGSMAYGMFANTRATGRYSINEIIIICLSVLFISVLAATILLVCLIRRRSLGYFSREKEVED 1089
BLAST of Protocadherin 1 vs. TrEMBL
Match: A0A4S2LS18 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_005535 PE=4 SV=1) HSP 1 Score: 363.999 bits (933), Expect = 4.511e-103 Identity = 304/996 (30.52%), Postives = 434/996 (43.57%), Query Frame = 1
Query: 235 SKLSVNNRIDREAICPTSS------------------------------INCFIILKVTL-HGTDRI----------------VTIRIEIDDVNDHSPNW--KINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL------ESSTDTFILVQE--HGLYLQTLKQLDREHKSGYKLTIISTDRG------IPSKSGR----LEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNG------EXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYE-----------------------------SGIH-----KFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSE---------TG---FAIIDENKPLSTSVALIQASDKDFKESDTVTC--TTDNFGFAESLSLTPTNDNN---------EFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQ-----------------VKAIDKDSGKNGFVVYSIPAHDI---PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-------------KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDH--------------------------YSLDIEACDMGT-PRM-CTTFRGFKINI---------------------------------QRNGDLTKTKGQPNLLIDSSG-----------------MSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKESQN 2490
+L V RIDRE +CP S +C I LK+++ G +I +T+R+ IDD+ND++P W + + +V+F +G+ AG R+++P + D D G NG++ Y L + ++TF L+ G+YL KQ+DRE + Y+ + + DR +PS+ R L ++V I DINDNTP F IF P +PET PV + VL L +DADAG NG ++ P E AK YF ++ +G+I+V R LD + SG+ KF F V+++D A Y RSSE+ V I +SDENDE P ++ +R + E TG F + ENKP+ T+VA +QA D DF+ +D V C T NF L +N N + L TA LDRE+ + I C D+ H T N +V + D NDN P+F N HM + ENM GT + A+D D+G N V Y + + I F ID +TG I + DRE + Y +A DHG P L+ST T + + D NDN + Y F + EN P T VG+V ATD D+ I Y + SD+ F ID+ TG+I + LDRE Q +Y F A D + + V + ++D NDN P+F PNS+ N+++++ E G L I A D DD E+A I YS+ + + LF LD TG LYL G D D + L +EACD G P+ CT F KI I R +L + + + SSG ++E III L + ++ TI ++ L+RR+S KE +N
Sbjct: 28 GRLLVARRIDREQLCPGSQSVGSPLDSVYSMKYVSKLTSQGSHSSTASSSHCIITLKMSVFSGAAKIKVSGVKSSKADNPQAILTVRLLIDDINDNAPYWPGHLKRFQVVFRDGDLAGERRTLPPAADLDAGLNGRLSYELVPTTHSDKGSETFSLIDHAMEGIYLCATKQIDREEREAYQYILKAIDRSNPENDQMPSEESRFTSTLVIDVHIEDINDNTPLFVQPIFTPNAPVPETTPVGTTVLILNATDADAGINGAFHFGFSREHAWLPIEI-YAKQYFDIRSNGQIVVRRPLDVDRDRSTQEIFRQEQRNGVQGHSSSGATFLSSGLASGTTIKFRFHVVVEDEAVRPYSRSSEATVVITVSDENDEAPIVEIREVREDIEQKTNGVPGPTGNFNFLSVMENKPIGTAVATLQAYDPDFEGTDHVECRLKTPNFSL-----LQTSNQQNPILMVSGAVTYHLQTATELDREVTPVQLVPISCIDTAGHLTERNFSVYVLDENDNPPRFVHNTFHMQVWENMSPGTQLQRMESVQSSIHSNLLYHHPYFTAVDSDTGANADVFYQLIENGINATTFKIDPKTGTITTAVSFDREAVDHYTLYALAIDHGIPPLTSTSTVKITILDVNDNAPQFGSVEYTFHLAENQPRATQVGQVTATDLDSDIYGPIHYFVGDESDATNFRIDKMTGIIRCRQALDREKQARYVFTVLAKDTNVHSSNSKSLSSLQLTGTCTVTVLIDDENDNWPIFVNPNSTANTLAVAVDETLGHKLAYIQATDADDGENALITYSIRSGNTNGLFGLDSTTGLLYLSGLFRGTSMSDHDSRTKNVTVNLAGDTRVDMSPALVGPSFHMLTLEACDQGKHPKQKCTLFSNLKILINNRLDGEVDAMENDNQSGQISDSGLRRKEKAVQSRRNELVASAANGHTVGTSSGSMAYGMFATTRATGRYSINEIIIICLSVLFISVLAATILLVCLIRRRSLGYFSREKEIEN 1017
BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 298.901 bits (764), Expect = 3.037e-85 Identity = 270/848 (31.84%), Postives = 405/848 (47.76%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDI-----PKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF----ILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESG-IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKF-YPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMC----------------TTFRGFKINIQRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLR 2445
+L+LIL + L + + Y +KEE P IG L D+ P + + + ++ + + + NRIDRE +C + CF ++V + + R+V IR I+D+ND++P ++ + E +R +P +FDPD G NG Y L S F I E + Q + Q LDRE K + + I D G P KS ++V + D+NDN P F S +PE P+ + V +L +DAD G N + FSFS + K +F + +I ++Q LD ES +HK +++ AS G S + V + ++D ND P I Y M N G ++ EN PL+T +ALI +D+D + VTC TD+ L P N++F L TA LD E + I+I+ +DS TS + + I D NDN+P F I +SI EN D GT K + A D DSG N ++YS+ D P F ID R+G++ RLDRE + Y F ++A D+GS L S VT + V D+NDN + Y F V EN P VG + TD D +L ++ F ID TGVI DRE Q Y F A D ++ + V I V DVNDN PVF +P+S+ + + + G +T++ A D D +A +QYS++ LF++DK TG + LQ + A D+ + L ++ D+G P TF ++ L K G ++L ++G ++IA+I + +I+V IF+ L+R
Sbjct: 49 VLVLILTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDLDLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVN--VPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRESNPVHKL---IVL---ASDGSATPSRATVIVNVTDVNDNVPSIDTRYIM--NPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDH---DVPFRLKPVF-NDQFLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIK-ITATDADSGSNALIIYSL-GPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNPGSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANA---DQGLHRLVVKVKDLGQPESLHSIALVHLFVNDTVSNATFLQEQVRKSMETPLDKNVGDSDILPQTNGYVI-VVIAIIAGTMTVILV-IFVTALVR 875
BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 298.901 bits (764), Expect = 2.087e-84 Identity = 270/848 (31.84%), Postives = 405/848 (47.76%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDI-----PKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF----ILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESG-IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKF-YPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMC----------------TTFRGFKINIQRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLR 2445
+L+LIL + L + + Y +KEE P IG L D+ P + + + ++ + + + NRIDRE +C + CF ++V + + R+V IR I+D+ND++P ++ + E +R +P +FDPD G NG Y L S F I E + Q + Q LDRE K + + I D G P KS ++V + D+NDN P F S +PE P+ + V +L +DAD G N + FSFS + K +F + +I ++Q LD ES +HK +++ AS G S + V + ++D ND P I Y M N G ++ EN PL+T +ALI +D+D + VTC TD+ L P N++F L TA LD E + I+I+ +DS TS + + I D NDN+P F I +SI EN D GT K + A D DSG N ++YS+ D P F ID R+G++ RLDRE + Y F ++A D+GS L S VT + V D+NDN + Y F V EN P VG + TD D +L ++ F ID TGVI DRE Q Y F A D ++ + V I V DVNDN PVF +P+S+ + + + G +T++ A D D +A +QYS++ LF++DK TG + LQ + A D+ + L ++ D+G P TF ++ L K G ++L ++G ++IA+I + +I+V IF+ L+R
Sbjct: 49 VLVLILTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDLDLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVN--VPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRESNPVHKL---IVL---ASDGSATPSRATVIVNVTDVNDNVPSIDTRYIM--NPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDH---DVPFRLKPVF-NDQFLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIK-ITATDADSGSNALIIYSL-GPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNPGSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANA---DQGLHRLVVKVKDLGQPESLHSIALVHLFVNDTVSNATFLQEQVRKSMETPLDKNVGDSDILPQTNGYVI-VVIAIIAGTMTVILV-IFVTALVR 875
BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 294.664 bits (753), Expect = 4.506e-83 Identity = 270/850 (31.76%), Postives = 405/850 (47.65%), Query Frame = 1
Query: 28 ILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDI-----PKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKY------TLESSTDTFILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESG-IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKF-YPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMC----------------TTFRGFKINIQRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLR 2445
+L+LIL + L + + Y +KEE P IG L D+ P + + + ++ + + + NRIDRE +C + CF ++V + + R+V IR I+D+ND++P ++ + E +R +P +FDPD G NG Y LE D I E + Q + Q LDRE K + + I D G P KS ++V + D+NDN P F S +PE P+ + V +L +DAD G N + FSFS + K +F + +I ++Q LD ES +HK +++ AS G S + V + ++D ND P I Y M N G ++ EN PL+T +ALI +D+D + VTC TD+ L P N++F L TA LD E + I+I+ +DS TS + + I D NDN+P F I +SI EN D GT K + A D DSG N ++YS+ D P F ID R+G++ RLDRE + Y F ++A D+GS L S VT + V D+NDN + Y F V EN P VG + TD D +L ++ F ID TGVI DRE Q Y F A D ++ + V I V DVNDN PVF +P+S+ + + + G +T++ A D D +A +QYS++ LF++DK TG + LQ + A D+ + L ++ D+G P TF ++ L K G ++L ++G ++IA+I + +I+V IF+ L+R
Sbjct: 9 VLVLILTCLVSLCWAQEKDYTVKEEQPENVRIGNLRTDLDLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLCSGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKVGALEFGLD-IIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVN--VPENAPMGTSVTQLHATDADLGSNAQIHFSFSNQISPATKRHFAIDSSTGLITVKQPLDRESNPVHKL---IVL---ASDGSATPSRATVIVNVTDVNDNVPSIDTRYIM--NPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDH---DVPFRLKPVF-NDQFLLETAAPLDYETTREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIK-ITATDADSGSNALIIYSL-GPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTTNPGSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANA---DQGLHRLVVKVKDLGQPESLHSIALVHLFVNDTVSNATFLQEQVRKSMETPLDKNVGDSDILPQTNGYVI-VVIAIIAGTMTVILV-IFVTALVR 836
BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 265.774 bits (678), Expect = 4.502e-74 Identity = 244/777 (31.40%), Postives = 355/777 (45.69%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKL-SVNNRIDREAI--CPTSSINCFIILKVTL-----HGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQ--------EHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNN-----EFKLVTARMLDREMEKRIFIRIICTDSVNHK-TSTN-ITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP---FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMP-NSSLNSISLSYKEAAGFSLTKIV-AEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+ L+ L D + S +Y ++EE P +IG L D + +G+ L + G +D + ++ + IDRE + C CF+ +V++ + + R++ RIE+ D+ND++P + + E H G+ +IP + D D NG +KY L + + L E L L LDRE K Y LTI + D G PS+ + V I D NDN P+F S + + E PV VL++ +D+D G NGE ++ + K + + G I V LD E I F F VI +D ++ +E+ ++N +I+ +RT+S+ G A I E+ P+ T+VAL+Q SDKD E+ VTC L P D++ ++ L T LD E + + I+ DS N +STN + V + D NDNSP FS + + E G V A+D DSG N +VYSI A F ID +G +R++ LDRE K Y+F + A+D G P T T ++ V D NDN S Y F V EN PP +PVG V D D + L D G F + TG I++ DRE + Y FR A D S V I V D NDN PV P NSS +S AA S+ ++V AED D +A + YS+ LF + G + L + L H + L ++ D G P
Sbjct: 7 WFLLFALLVDSINSALGGILYHVREEQPPNTLIGSLAAD----QGLPDSGH--LYKLEVGAPYLRVDGKTGEIFTTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAE--VSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREE-ISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSD-GVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAG---DVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKV-LDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLS---PLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHG---GLHRLVVKVSDRGKP 763
BLAST of Protocadherin 1 vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 265.388 bits (677), Expect = 3.259e-73 Identity = 244/777 (31.40%), Postives = 355/777 (45.69%), Query Frame = 1
Query: 25 FILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKL-SVNNRIDREAI--CPTSSINCFIILKVTL-----HGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQ--------EHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNN-----EFKLVTARMLDREMEKRIFIRIICTDSVNHK-TSTN-ITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP---FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMP-NSSLNSISLSYKEAAGFSLTKIV-AEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+ L+ L D + S +Y ++EE P +IG L D + +G+ L + G +D + ++ + IDRE + C CF+ +V++ + + R++ RIE+ D+ND++P + + E H G+ +IP + D D NG +KY L + + L E L L LDRE K Y LTI + D G PS+ + V I D NDN P+F S + + E PV VL++ +D+D G NGE ++ + K + + G I V LD E I F F VI +D ++ +E+ ++N +I+ +RT+S+ G A I E+ P+ T+VAL+Q SDKD E+ VTC L P D++ ++ L T LD E + + I+ DS N +STN + V + D NDNSP FS + + E G V A+D DSG N +VYSI A F ID +G +R++ LDRE K Y+F + A+D G P T T ++ V D NDN S Y F V EN PP +PVG V D D + L D G F + TG I++ DRE + Y FR A D S V I V D NDN PV P NSS +S AA S+ ++V AED D +A + YS+ LF + G + L + L H + L ++ D G P
Sbjct: 43 WFLLFALLVDSINSALGGILYHVREEQPPNTLIGSLAAD----QGLPDSGH--LYKLEVGAPYLRVDGKTGEIFTTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTERNGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAE--VSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREE-ISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSD-GVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAG---DVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKV-LDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVGNFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKPSNSSFRRLS---PLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHG---GLHRLVVKVSDRGKP 799
BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 216.853 bits (551), Expect = 1.244e-58 Identity = 213/735 (28.98%), Postives = 336/735 (45.71%), Query Frame = 1
Query: 217 ILDPISSKLSVNNRIDREAICPTSSINC-------FIILKVTLHGTD----RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTD------TFILVQE------------------HGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFL-VKPDGEIIVLR---QLDYES-GIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTN--SETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTS--TNITVDIGDVNDNSPKFSD--------NIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP----AHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDN-PVIIETS-----PYEFKVKENSPPNTPVGRVIATD---KDNQTIFYSL------DYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSL-TKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSL 2190
I++ +S +LSV R+DREA+C C + + G R++ +++ + D+NDH+P ++ V +E E G R +P + DPD G N Y + +++ F LV+ H L+ +QLDRE Y+L + D G P SG + + + ++D NDN P F RP +I E V + V++L +D DAG NG ++SF TS+A L V ++ +R +LD E+ +H+ V+ +D L RS+ V + ++D+ND P + ++ + G I+ EN P T V LI SD D S TV + F L N +F L T R+LD E ++ + ++ D K S N+ + + D+NDN+P F + + +S++EN AGT + A D DSG NG + +++ + F+++ RTG + LDRE + Y+ + A D GSP+ + V V DENDN P + S Y+F V+E + T VG V +D DN + +L D++ +G D GV+ T LDRE + +Y+ A D SAS V I V D NDN PV PN++ + AG + + A D D ++ R Y ++ +F L+ D+G L L R++
Sbjct: 75 IVNELSGELSVALRLDREALCMEEPDACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRIT-EHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHR--LVVVARDGGQL--SRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIV-ENLPSGTPVVLISVSDPDLGSSGTVDVRLE---FPTGAELASPN-KVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVV-LNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAG----DTPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSPNTNDTWKHVRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTV 794 HSP 2 Score: 135.191 bits (339), Expect = 1.419e-32 Identity = 110/368 (29.89%), Postives = 176/368 (47.83%), Query Frame = 1
Query: 1261 LDREMEKRIFIRIICTDSVNHKTSTNI--TVDIGDVNDNSPKFSDNIIH-MSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP------AHDIPFTIDSRTGVI--RSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYE--------FKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVM---IFVEDVNDNPPVFKMPNS-----SLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVV----NEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPR 2262
LDRE + + D N K S ++ T+ + D NDN+P F D + I E+ GT+ Q++A D D+G NG + YS A +D TG++ R+ ++LDRE +++ ++VA D G S++VT V ++D+NDN + E + K+ EN P TPV + +D D + T+ L++ + + + ++ ++ T LD E +Y A D+ S ++ I V D+NDN PVF P S ++ +SL AG + ++A D D + I +++ E + LFSL+ TG L L LD E R Y L +EACD G+P+
Sbjct: 230 LDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSV-VQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEFPTGAELASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLD---REKRMRYELSVEACDGGSPQ 593 HSP 3 Score: 113.235 bits (282), Expect = 1.116e-25 Identity = 115/435 (26.44%), Postives = 192/435 (44.14%), Query Frame = 1
Query: 1087 IDENKPLSTSVALIQASDKDFKESDTVTCT--TDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDS--VNHKTSTNITVDIGDVNDNSPKFSDNIIH--------MSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDN------PVIIE--TSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGK----FNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKE---AAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDT--GFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFR 2280
I E+ + TSV ++A+D D + + + T A +L + A LDRE + ++ D ++ S +TV++ D NDN+P F + + I EN+ +GT + D D G +G V + P + + ++++ LD E Y ++A+D G+PKLS + ++ V D NDN P IE + YE ++EN P T V ++ATD D N I ++L ++ F+++ TG + + LDRE + +Y+ A D + A +IV + V D NDN P F ++S N + + E + G + + D D+ ++AR+ ++V E DT G + R+L EDR Y L + A D G P + + R
Sbjct: 282 ITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPV-VLISVSDPDLGSSGTVDVRLEFPTGAELASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVV---RTLVVLDREDRVQYELSVRAVDSGRPALSASCR 712
BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 195.282 bits (495), Expect = 7.683e-51 Identity = 185/664 (27.86%), Postives = 306/664 (46.08%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFR---PTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETS-IAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDF---KESDTVTCTTDNFG-FAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNH-----KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP-----------AHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASS---IVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
+ I ++DVND+ P + + + ++ E G + D D G N + Y++ S ++ +V L+ ++LDRE ++ Y LT+ ++D G + RL V V D NDN+PRFS + P+ ++V+ + DAD+G GE +++ +P+E S A F + P G + V R LD ES +++ A+ G ++ +R+ + + D ND P ++ +++ A + E+ P TS+ I A+D D E + + D G FA N+ +L AR LDRE + + + +D H ++ +++ + DVNDN+P F+ ++ E+ G V+A+D DSG+N +V Y++ A PF +++ TG +R LDRE + Y ++A D G P L+ST T V V D NDN YE + E+ PP T V R+ A D D N + Y + +G F +D G + LDRE Y+ A D A S V + + DVND P F++ +++ + + + ++VA D D S ++ Y+ FS+ D G ++L RSLD E + + L I A D
Sbjct: 1502 VEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEGAFVVDAASGVLRASRRLDREERASYLLTVRASD-GTHATDARLSVAVR--DANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRAC-----YVLRARATDGGGLAATARLYVNVLDANDNAPSVQ-------NDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAV---------GNDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALA-PEDSPVGAVV-ATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYTVH--ARENTQGPPVLILQVVARDDDLGSSGQVTYAAAGGNDGGAFSVSPD-GHVHLLRSLD---REAQPQHVLIITATD 2133 HSP 2 Score: 194.126 bits (492), Expect = 1.426e-50 Identity = 203/706 (28.75%), Postives = 315/706 (44.62%), Query Frame = 1
Query: 175 YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLH--GTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLE--SSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTS--IFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYES-----GIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEF-------KLVTARMLDREMEKRIFIRIICTDSVNH--KTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHD--IPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGK-FNIDRTTGVIVTKSKLDREIQHK-YQFRAFATDKL------NSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD 2193
Y I++ +G +F ++ ++ N IDRE F L+V + G ++ + + DVN+H+P + ++V E E SR + D D G NG++KY + + + F + + LY++ +LDRE + Y LT+ + D G+ S + V V +LD+NDN P F++S +F E V S+V + +DADAG NG ++SF + + + L G I LR D E+ G F F V+ D + V++ + D ND PQ + A + E+ T + + ASD D + A ++ N+ +F ++ LDRE + + TDS S + V + D NDN P+F+++++ + E+ G + A D+D+G +G V Y+I A + F ID TG + RLD E + LY+ + A D G P SS +VHV D NDNP + EN P T V V A D D N + YS+ G F ID +G I T +++DRE+ ++ ATDK SA V + V D NDN P F P + L + AAG + + A DPD+ E+A ++Y+V + LF LD+ TG + LD
Sbjct: 693 YLIVSGDQRG--SFSIEWSGGRIFTANAIDREE-------QAFYQLRVVANSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIFPDGQLYVR--YELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFH----FCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVN----FELDSETGRIASLRVFDREALIRQGGAASFSFSVVATD-GGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQ-------ASVSESASNLTQLLRVTASDVD-----------EGVNGALRYAINEGNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELL-ITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTAILVD---GLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTGIIETSTELD 1356 HSP 3 Score: 158.303 bits (399), Expect = 2.325e-39 Identity = 195/696 (28.02%), Postives = 320/696 (45.98%), Query Frame = 1
Query: 241 LSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTD-TFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHAS--LGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARM-LDREMEKRIFIRIICTDS--VNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD---KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD-------GAHAEDRDHYSLDIEACDMGTPR 2262
L V +++DRE I P ++ ++ + ++DVNDH+P + ++ + +EG AGS + D D G N +++Y++ S D + V E + T ++DRE S L I + D+G K+ + V +LD+ND P F+ + + T + ++P VV ++ +D+D G+NG ++F P + + F L G++ L+ LD E + ++ V +D S LG S ++V +++ D ND +P FYP++ FA I EN+P T+V + A+D D + TV G A + N V+ R+ LDRE +++ D + ++ +T+ + D D P F+ + + EN+ GT V A D N V Y I + D F+I+ G I + + +DRE + YQ +VA+ G +S V+ LVH D N++ + + + YE + E+ P N+ V ATDKD N + Y + + KF I G + + +LDRE + +Y A D + S+S V + V DVNDN P+F NSS ++ G + + A D D + + YS EK F LD +TG + R D G A +S + A D G P+
Sbjct: 292 LKVASQLDRERI-PMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATA-VENSLPGLFVV-SVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREE-LEEYPLVVQAQDRGSPPLG----STAKVTVVVGDLNDNHP--VFYPVQY-----FASILENEPGGTAVTTVTATDPDRGANGTVRYQL-TAGDAARFQV-----NAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGS-VSASTLDLNAN--VTYLIVSGDQRGSFSIEWSGGRIFTANAIDREEQAFYQLRVVANSGGVAGEAS-VSVLVH--DVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGI-FPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLF---NSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSF--EKPQVNFELDSETGRIASLRVFDREALIRQGGAAS----FSFSVVATDGGRPK 950 HSP 4 Score: 156.377 bits (394), Expect = 1.006e-38 Identity = 184/670 (27.46%), Postives = 296/670 (44.18%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNW-KINKHKVIFNEGEHAGSRKSIPISFDPDFGDNG--QIKYTLESSTDTFILV------QEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL-----------VTARMLDREMEKRIFIRIICTDS---VNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIP-FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLD---YVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
+R+ + DVND++P++ + +V F E G + + + D D G NG Y + S + LV + L+L T LDRE Y L + + D G P + GRL+V V + D NDN P F +R + + E PV + + L G +A + P ++ RQ LD+E+ + + + ++ S + I + D ND P I+F + + + A +DE+ T AL+ +D D T N S+S+ N+ F L A LDRE + I+ +D+ V + ++ V + DVND++P+F+ + ++ E AG+ K V A+D DSG N + YSI +D+ F++D TG++ + ++DREV + I A D G+ ++ + V + D ND P + + Y ENS P V V A D D N T+ Y+ D F +D TG + T LDRE +Y A D+ + +++ V + V D+NDN PVF P SI E G ++T + A DPD + ++Y + ++ F ++ TG + + SLD E+R Y L + A D G
Sbjct: 9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRAS--VAEDSPVGAALRDLL-------HRGRG---------PLAVPF---DPKTGMVSTRQPLDFEA---RRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARS--ASVDESAAPGTVAALVTVTDAD--------SPTANGEL--SVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYV-KDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHPVF-YPVQYFASI--LENEPGGTAVTTVTATDPDRGANGTVRYQLTAGD-AARFQVNAVTGAVSTRVSLD---REERAVYQLQVTALDGG 634 HSP 5 Score: 151.369 bits (381), Expect = 3.663e-37 Identity = 196/729 (26.89%), Postives = 310/729 (42.52%), Query Frame = 1
Query: 175 YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDR-----IVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST-----DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDT-VTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREI------QHKYQFRAFATD----KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
Y I++ D G F +D + ++ + ++DRE + ++L ++ ++ + + DVND P + K+ E G + D D G+NG ++Y + + F L G + TLK LDRE Y L + + DRG P +V V + D+NDN P +F P + I E P + V +T +D D G NG + + + A + + G + LD E + +V D G+ R+ + I + + P P + F + EN T V + AS D + T + + D G S S+ + ++ TA +DRE + +R++ +S +++V + DVN+++P F +SI E+ + + V+A DKDSGKNG V Y I + F I G + + LDRE + Y + A D G LSS+VT V V D NDN + +S Y F E + VG V ATD D N + YS + F +D TG I + DRE + F ATD K + V +FV+DVNDNPP F S+ S+S + L ++ A D D+ + ++Y++ F++D TG + L SLD E+ Y+L + A D GT + +
Sbjct: 378 YSIVSGNDLGW--FSVDESTGLVTTDGKVDRE-------VASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTG-KVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDNHP-----VFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQLTAGD---AARFQVNAVTGAVSTRVSLDREE-RAVYQLQVTALDG---GHLRARSPAIVTITVADAQDTP-----PTFARDDYSFVVF-ENVAPGTLVGSVSASTLDLNANVTYLIVSGDQRG---SFSIEWSGG----RIFTANAIDREEQAFYQLRVVA-NSGGVAGEASVSVLVHDVNNHAPVFDRASYEVSIAED-EPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIFP-DGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFE--KPQVNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFA---KSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGSLD---REETASYTLVVSATDSGTSPLAAS 1060 HSP 6 Score: 145.591 bits (366), Expect = 2.234e-35 Identity = 196/786 (24.94%), Postives = 322/786 (40.97%), Query Frame = 1
Query: 61 LSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHG------TDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL-ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCT-TDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIF-IRIICTDS---VNHKTST--NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHD--IPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVD---DENDNPVIIETSPY-----EFKVKENSPPNTPVGRVIAT-------------DKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRA----------FATDKLNSASSI----------VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
L S +++ EE + ++G + S Y P+ NF LD + +++ DREA+ F V G DR T+++ + DVND+ P + + ++ +E ++ + D D G NG ++Y + E + V + L LDRE + Y L + +TD G + V V++LD NDN PRF+ S+ + E+ V +++ LT SD D G +G+ ++ T ++ + + G + + R+LD+E+ + V +D RSS + + + + D ND P F P FA I EN P+ T V + A D D + + + F ++ P + ++ TA +DRE+ +F + + TD V+ + S N+TV + D NDN+P+F + AG+ ++A D D +N V Y++ D I F +D RTG+I + LDRE S HG+ L +N +I + + F SP N G+ I + + Q +F++L + R GVI + LD + + A ++ + N A S V I VEDVNDNPPVF +P L + G + + A D D ++A + YSV++ + F +D +G L R LD E+R Y L + A D
Sbjct: 861 LFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQ----VNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDR-ATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINEGNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDAL--ESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTH--ATFAIDRSTGSVFLARRLDFETQ-RLYRLNVSAEDGGR--PPRSSATILVVHVRDFNDNPP--AFLPGDV-----FASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESG----EICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTPTAILVDGLRAAAGSVVGT-LQASDPDEAENAAVRYAVTGGDAAILFRLDRRTGIIETSTELDRE-----------SGHGAFTLEVVAVEAKAAAPRTQRAENTIIANSMTFNHPLPRFPQDYESPINLLQGQTIPMPSSYLFLRHHLDWEPEGQLVFFTL-------LLGVTRGHGVI---NPLDAPWRVSFDLTARCMFIVFSSLLSSLRDNGAGSFIRPPMSSFNQVEISVEDVNDNPPVFAVPEMELE---VEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEGA-FVVDAASGVLRASRRLD---REERASYLLTVRASD 1594 HSP 7 Score: 128.642 bits (322), Expect = 3.489e-30 Identity = 111/373 (29.76%), Postives = 169/373 (45.31%), Query Frame = 1
Query: 1243 LVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDA-GTTTNK---QVKAIDKDSGKNGFVVYSI-PAHDI-----PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK-------LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSL---------FSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
L +R LDRE + + +D H T ++V + D NDNSP+FS + + E+ G TT V A D DSG G V Y++ P+ D F + TG + LDRE + Y A+D G L++T V+V D NDN ++ +V E++PP T + R+ ATD D N + +S+ G+F + + V ++ LDRE Q Y +D+ L+SA + +I DVNDN P F P S+L G + + A DPD ++ ++Y++ + F+L+ TG + L R LD E R Y+L + A D G P + +T
Sbjct: 1572 LRASRRLDREERASYLLTVRASDG-THATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGG--LAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVGNDGQLSVARA-LDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILT-DVNDNAPAFTSPRSAL----APEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELD---REARQSYALTVLAVDKGRPPLTST 1932 HSP 8 Score: 83.1889 bits (204), Expect = 2.494e-16 Identity = 92/332 (27.71%), Postives = 139/332 (41.87%), Query Frame = 1
Query: 1333 TNITVDIGDVNDNSPKFSD-NIIHMSIKENMDAGTTTNKQV---KAIDKDSGKNGF--VVYSIPAHD------IPFTIDSRTGV-IRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFK---MPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKES-ARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDH---YSLDIEACDMGTP 2259
T + V +GDVNDN+P F + ++ ++ KE+ G +QV A+D+D G NG Y I + + P + R + + + LDRE Y + A D GSP+ + V V D NDNP E Y V E+SP + ++ + + + D TG++ T+ LD E + +Y A D N S + +I + DVNDN P + +P ++ S S+ A G + D D + + S+V F L G L R L A DR+ Y+L I A D G P
Sbjct: 7 TEVRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVG----RQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAALRDLLHRGRGPLAVPF-------------DPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAA-RSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHA-PGVPGL-RVLKVASQLDRERIPMYNLTILASDNGKP 318 HSP 9 Score: 81.2629 bits (199), Expect = 1.069e-15 Identity = 63/237 (26.58%), Postives = 113/237 (47.68%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESS--TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYES 918
F L+ ++ ++ + +DREA + ++ + K T T+ + + D ND++P + +++ E E G+ ++DPD G NG+++Y + S T F L G L + LDRE + Y+L + + D G P++S V V + D+ND +P F S + T ++L++ D D G +G+ +++ F V PDG + +LR LD E+
Sbjct: 1892 FALNTVTGEVRLVRELDREA-RQSYALTVLAVDKGRPPLTS-TATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGT-LAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPYT-VHARENTQGPPVLILQVVARDDDLGSSGQVTYA---AAGGNDGGAFSVSPDGHVHLLRSLDREA 2121 HSP 10 Score: 69.707 bits (169), Expect = 3.249e-12 Identity = 64/223 (28.70%), Postives = 97/223 (43.50%), Query Frame = 1
Query: 1627 PKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAG-------FSLTKIVAEDPDDKESARIQYSVVNEKYS----SLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
P +SS + V+D NDNP + E +V+EN+ + + ATD D N + YS+ S+ G F +D +GV+ +LDRE + Y A+D ++ + + + V D NDN P F S ++ S E A + ++A D D + Y++ + S F L TG L + R LD E R Y L A D G
Sbjct: 1494 PPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSE-GAFVVDAASGVLRASRRLDREERASYLLTVRASDGTHATDARLSVAVRDANDNSPRF-----SRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLD---RESRACYVLRARATDGG 1707
BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004042.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004042.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 177.178 bits (448), Expect = 3.933e-45 Identity = 183/655 (27.94%), Postives = 288/655 (43.97%), Query Frame = 1
Query: 346 TIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRG-IPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTST--NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSL------DGAHAEDRDHYSLDIEACDMGTPRM 2265
T+ + ++D ND+ P + + + E GS ++ + D D G N I Y L F + G + T LDRE + Y L + + D G P S + V + D+ND+TPRF + + P + P + V +T DADAG NG+ F + + A + F V P G I R L + V + D G S + + E+P+ P R+ S E++P T++ ++ A + S + + +L D ++ R LD E + + + DS S + VD+ D+NDN+P+FS + + EN T + A+DKDSG NG V YSI +I F ++ +G IRS LDRE Y+ + A+D GSP TV L+ V DENDN T + V+E++ PV RV D D N I +SL + S F+I +TG I +L+RE + Y + A+D + S+ V I V+DVNDN P F + S EA + ++ A D DD + ++ + + ++ + F + +D+G ++ R L G + + YS + A D G P +
Sbjct: 11 TVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQIITT-ASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPY--VAYAPSSAPAGTAVFAVTARDADAGPNGDLRF----SLSGSASAGFSVDPRRGVIHAARAL--QGPRDDLTLTVRVSDG---GAPPRSAVTTVTVRFRDAGEFPRFAPGP-RSFS------FREDQPPGTTITVVAA-----RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIV--VLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRF-TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSL--LDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEAL---VARVSASDADDGANGQVFFFMRSQTEN--FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPL 631 HSP 2 Score: 157.918 bits (398), Expect = 3.570e-39 Identity = 173/666 (25.98%), Postives = 299/666 (44.89%), Query Frame = 1
Query: 331 TDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI-IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXX-XXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEK--RIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVD--DENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSG----KFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPD---DKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
+D VTI I + + N +P + ++ AG+R + DPD NGQI Y++ + + G +L L + S + +T+ + DRG P S R + + + N PRF+ P ++ +PE P S + ++T +D DAG NG +S + + S + + + G+++++ +LDYE+ ++ V D G++ +E ++D ND P + N+ + +I EN P T+V ++ A D D S+ VT + + G A+ L + L T LD E ++ + +R H ++ + V I VN+ P+F + + E+ G V A D+D+G +G V Y + + F+++ TG I +LDRE + ++A + GS + LV+V D ND PV ++ Y +V E + T V V A D D+ + + ++ SG F+I+ TG+IV S LDRE Y A D + +++V++ +EDVNDN P +S ++ + AG ++ + A DPD +K Q + + FSL +G L R +D E + + L + D G+P + +T
Sbjct: 633 SDATVTINIVVPNAN--APRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHP---PLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGS--GLFDISRASGDVLLVGELDYET-EKLYNLSVCAADG---GWQAKTECSGVSISVTDVNDNPPML-------NASDYYPVIPENAPSGTTVLVMDAVDAD-SPSNAVTMYSLDDGEADLFVL----NQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGS-VFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDPPVF-SSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLT-----SSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSL-SSSGLLKTARPID---REQKPEFHLPVAIADAGSPPLTST 1264 HSP 3 Score: 142.124 bits (357), Expect = 2.787e-34 Identity = 167/610 (27.38%), Postives = 268/610 (43.93%), Query Frame = 1
Query: 490 GQIKYTLESST---DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYP---QIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLD-REVK--------NLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
G + Y L S D F + + G + + LD E++ Y+L + + D G P S L++EV++LDINDN P FS+S F +PE P +++V+ LT D D+G NG+ +S + +I F V P+ GEI + LD E+ + ++ V D S + +V I ++DEND P QI +R ++ GF + ++ S D E T + S+ P+ ++ +R L+RE +++ +D ST++T+ + DVNDN+P+F ++ E + G +V A D D G NG V + + + F + +G I S L R+ N Y F++ A D G P LSS T +++ N N Y V T + + A D D N I YS+ + S +F++D G + ++ L + + A D+ S+ + +I V + N P F P L SL AG SL ++ A D D + I YS+ + S LF + + +G + L LD E Y+L + A D G
Sbjct: 263 GPVSYHLASGGNLGDVFAVDPQSG-EVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRF--WAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSI--IDGNIGN-VFRVNPNSGEIRSVSTLDREN-VASYELTVKATDRGSP--TQHCTVKVLISVTDENDNSPRFTQIFSAHVREDAAVGFPV-------------LRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTG----EITVSRRLNREDRSGYAVKVRASDPA-WTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSE-GEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVD-AGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLEL---SLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELD---YETEKLYNLSVCAADGG 836 HSP 4 Score: 132.109 bits (331), Expect = 3.054e-31 Identity = 179/717 (24.97%), Postives = 298/717 (41.56%), Query Frame = 1
Query: 202 GVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTL------HGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKS-----YFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLD-REIQ--------HKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRM 2265
G +F ++P + ++ +DRE +L+VT G T+ + + DVNDH+P + + AG+ + D D G NG ++++L S V + + L + + LT+ +D G P +S V V D + PRF+ R + P ++ + S AG P +A F V P GE+ V R LD+E ++ ++++++ S S+ ++E+ + D ND P+ +S +A + EN P T + ++ A DKD + V + + + P N ++ + LDRE + + TD S + + + + D NDNSP+F+ I ++E+ G + V +D D G N + +S+ +PF+I TG I RL+RE ++ Y + ASD P + + + VDD NDN + Y + E S V RV A+D D N +F+ + S + F + R +G I + L R+ +KY F A D+ S+ + V I + N N P F S ++ AG + + A DPD + +I YSVV S F +D GFL+L+ SL G + +S+ +EA D G P +
Sbjct: 68 GDGHFSVNPSTGQIITTASLDREG-------RESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARAL-QGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGP-RSFSFREDQPPGTTITVVAARSSRRAG----------PVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHE---YQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEF-------SSSRFWAKVPENTPPRT-IVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNP----NSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFT-QIFSAHVREDAAVGFPVLR-VSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMR--SQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLR---ERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAG-GFLHLRASLAG---DAGSIFSVTVEARDRGRPPL 735 HSP 5 Score: 128.642 bits (322), Expect = 3.689e-30 Identity = 148/547 (27.06%), Postives = 234/547 (42.78%), Query Frame = 1
Query: 631 GIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEK-RIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
G P +G V V + D NDN PRF + R +PE P+ S V + +DADAG N S+ +F V P G+II LD E G + +V D SS + + + ++D ND P+ P A + P T+V + A D D + + F + S S + D + AR L + + +R+ + T +TV D + P+F+ S +E+ GTT + +G + + S F +D ++G + LD E ++ Y+ ++ A D G P S+ + V V D NDN +S + KV EN+PP T V + A DKD N + YS+ + F ++ +G I + S LDRE Y+ ATD+ + V+I V D NDN P F + + S + A GF + ++ D D+ +A I +S+++ FS+ TG + + R L+ EDR Y++ + A D
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELR--AAVPEDAPIGSDVALVNATDADAGLNAIISY-----RLRGGDGHFSVNPSTGQIITTASLDRE-GRESYVLEVTALDGGPT-PGLSSSATLVVAVTDVNDHTPRFLNAPY-------VAYAPSSAPAGTAVFAVTARDADAGPNGDL-----RFSLSGSASAGFSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIV-VLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRF----TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP--FSIHPSTGEITVSRRLN---REDRSGYAVKVRASD 516 HSP 6 Score: 128.257 bits (321), Expect = 4.562e-30 Identity = 155/585 (26.50%), Postives = 259/585 (44.27%), Query Frame = 1
Query: 307 ILKVTLHGTDRI-------VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESS--TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKT----STNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKN----GFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDS---GKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNP 1983
I VT+ DR T I + + N ++P + ++ E AGS + + D D G NG I Y++ S + F + + G L + +LD E + Y L++ + D G +K+ V + + D+NDN P + S + P +IPE P + VL + DAD+ N +S E + + L + G + LDYE+ K +++ ++ S ++V + I+ N+ +P+ E F ++ E+ P+ V + A+D+D TV F ES S + + + +++ + LDRE E +R+I ++ + + + V I D ND P FS + H + E GT V A D DS F++ S A F+I++ TG+I LDRE LY +VA D G P + T +V ++D NDN + TS KV EN P V + A D D N+ + SD G F++ ++G++ T +DRE + ++ D + +++ + + V D NDNP
Sbjct: 720 IFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVL-LVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYP--VIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADL---FVLNQKTGVLTTQGFLDYET---KQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRF------VQREYNF-VVSESAPVGAPVGSVFATDRDAGIDGTVFYML----FGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHV-VGVSAHDFDSPPGWRTFSFLIQSGNAGRA-FSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTS--SAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLS-SSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNP 1278 HSP 7 Score: 94.3597 bits (233), Expect = 1.056e-19 Identity = 142/516 (27.52%), Postives = 227/516 (43.99%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL-ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFK---ESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKT--STNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKD----SGKNGF-VVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKEN---SP-PNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTG 1851
+ I + DVND+ P + + + E +G+ + + D D N Y+L + D F+L Q+ G+ L T LD E K Y+LT+ + + +V V+I +N+ PRF + ++ E+ PV + V + +D DAG +G + S +K + + + GEIIV QLD E +VI K+ S+ E V + I+D ND P +S + E + T V + A D D + + + N G A S+ + + +V A LDRE + ++ D +T + V + DVNDN P + + EN AG T ++A D D G F ++ S PA F++ S +G++++ +DRE K + + +D GSP L+STVT + V D+NDNP + + +V N SP P +G V D D +SD +FN D T+G
Sbjct: 846 VSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGV-LTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREY--NFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLF--GESRSKGFSVNEHTGEIIVSSQLDREREASA-TLRVIAKNAGSIRGFDVDEVLVNVAITDAND--------PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSI------NAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTS--SAKVTENQPAGMTV-LNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSS-SGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNP----SEARDVRVHVNYFGSPFPGGFIGDVRPRDPD----------ISD--RFNCDLTSG 1321 HSP 8 Score: 89.3521 bits (220), Expect = 3.478e-18 Identity = 70/223 (31.39%), Postives = 109/223 (48.88%), Query Frame = 1
Query: 1621 GSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN----SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEA---AGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
G P+L+ T T V V+DENDN + V E++P + V V ATD D N I Y L G F+++ +TG I+T + LDRE + Y A D S+S+ +++ V DVND+ P F LN+ ++Y + AG ++ + A D D + +++S+ S+ FS+D G ++ R+L G RD +L + D G P
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLR--GGDGHFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRF------LNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSA-SAGFSVDPRRGVIHAARALQGP----RDDLTLTVRVSDGGAP 211
BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 177.178 bits (448), Expect = 4.094e-45 Identity = 183/655 (27.94%), Postives = 288/655 (43.97%), Query Frame = 1
Query: 346 TIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRG-IPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTST--NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSL------DGAHAEDRDHYSLDIEACDMGTPRM 2265
T+ + ++D ND+ P + + + E GS ++ + D D G N I Y L F + G + T LDRE + Y L + + D G P S + V + D+ND+TPRF + + P + P + V +T DADAG NG+ F + + A + F V P G I R L + V + D G S + + E+P+ P R+ S E++P T++ ++ A + S + + +L D ++ R LD E + + + DS S + VD+ D+NDN+P+FS + + EN T + A+DKDSG NG V YSI +I F ++ +G IRS LDRE Y+ + A+D GSP TV L+ V DENDN T + V+E++ PV RV D D N I +SL + S F+I +TG I +L+RE + Y + A+D + S+ V I V+DVNDN P F + S EA + ++ A D DD + ++ + + ++ + F + +D+G ++ R L G + + YS + A D G P +
Sbjct: 11 TVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQIITT-ASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPY--VAYAPSSAPAGTAVFAVTARDADAGPNGDLRF----SLSGSASAGFSVDPRRGVIHAARAL--QGPRDDLTLTVRVSDG---GAPPRSAVTTVTVRFRDAGEFPRFAPGP-RSFS------FREDQPPGTTITVVAA-----RSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIV--VLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRF-TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSL--LDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEAL---VARVSASDADDGANGQVFFFMRSQTEN--FRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPL 631 HSP 2 Score: 157.918 bits (398), Expect = 3.325e-39 Identity = 173/666 (25.98%), Postives = 299/666 (44.89%), Query Frame = 1
Query: 331 TDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI-IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXX-XXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEK--RIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVD--DENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSG----KFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPD---DKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
+D VTI I + + N +P + ++ AG+R + DPD NGQI Y++ + + G +L L + S + +T+ + DRG P S R + + + N PRF+ P ++ +PE P S + ++T +D DAG NG +S + + S + + + G+++++ +LDYE+ ++ V D G++ +E ++D ND P + N+ + +I EN P T+V ++ A D D S+ VT + + G A+ L + L T LD E ++ + +R H ++ + V I VN+ P+F + + E+ G V A D+D+G +G V Y + + F+++ TG I +LDRE + ++A + GS + LV+V D ND PV ++ Y +V E + T V V A D D+ + + ++ SG F+I+ TG+IV S LDRE Y A D + +++V++ +EDVNDN P +S ++ + AG ++ + A DPD +K Q + + FSL +G L R +D E + + L + D G+P + +T
Sbjct: 633 SDATVTINIVVPNAN--APRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHP---PLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGS--GLFDISRASGDVLLVGELDYET-EKLYNLSVCAADG---GWQAKTECSGVSISVTDVNDNPPML-------NASDYYPVIPENAPSGTTVLVMDAVDAD-SPSNAVTMYSLDDGEADLFVL----NQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGS-VFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDPPVF-SSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLT-----SSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSL-SSSGLLKTARPID---REQKPEFHLPVAIADAGSPPLTST 1264 HSP 3 Score: 142.124 bits (357), Expect = 2.576e-34 Identity = 167/610 (27.38%), Postives = 268/610 (43.93%), Query Frame = 1
Query: 490 GQIKYTLESST---DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYP---QIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLD-REVK--------NLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
G + Y L S D F + + G + + LD E++ Y+L + + D G P S L++EV++LDINDN P FS+S F +PE P +++V+ LT D D+G NG+ +S + +I F V P+ GEI + LD E+ + ++ V D S + +V I ++DEND P QI +R ++ GF + ++ S D E T + S+ P+ ++ +R L+RE +++ +D ST++T+ + DVNDN+P+F ++ E + G +V A D D G NG V + + + F + +G I S L R+ N Y F++ A D G P LSS T +++ N N Y V T + + A D D N I YS+ + S +F++D G + ++ L + + A D+ S+ + +I V + N P F P L SL AG SL ++ A D D + I YS+ + S LF + + +G + L LD E Y+L + A D G
Sbjct: 263 GPVSYHLASGGNLGDVFAVDPQSG-EVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRF--WAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSI--IDGNIGN-VFRVNPNSGEIRSVSTLDREN-VASYELTVKATDRGSP--TQHCTVKVLISVTDENDNSPRFTQIFSAHVREDAAVGFPV-------------LRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTG----EITVSRRLNREDRSGYAVKVRASDPA-WTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSE-GEALVARVSASDADDGANGQVFFFMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVD-AGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLEL---SLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELD---YETEKLYNLSVCAADGG 836 HSP 4 Score: 132.109 bits (331), Expect = 3.262e-31 Identity = 179/717 (24.97%), Postives = 298/717 (41.56%), Query Frame = 1
Query: 202 GVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTL------HGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKS-----YFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLD-REIQ--------HKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRM 2265
G +F ++P + ++ +DRE +L+VT G T+ + + DVNDH+P + + AG+ + D D G NG ++++L S V + + L + + LT+ +D G P +S V V D + PRF+ R + P ++ + S AG P +A F V P GE+ V R LD+E ++ ++++++ S S+ ++E+ + D ND P+ +S +A + EN P T + ++ A DKD + V + + + P N ++ + LDRE + + TD S + + + + D NDNSP+F+ I ++E+ G + V +D D G N + +S+ +PF+I TG I RL+RE ++ Y + ASD P + + + VDD NDN + Y + E S V RV A+D D N +F+ + S + F + R +G I + L R+ +KY F A D+ S+ + V I + N N P F S ++ AG + + A DPD + +I YSVV S F +D GFL+L+ SL G + +S+ +EA D G P +
Sbjct: 68 GDGHFSVNPSTGQIITTASLDREG-------RESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARAL-QGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGP-RSFSFREDQPPGTTITVVAARSSRRAG----------PVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHE---YQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEF-------SSSRFWAKVPENTPPRT-IVVLTAVDKDSGINGQVDYSIIDGNIGNVFRVNP----NSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFT-QIFSAHVREDAAVGFPVLR-VSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFFFMR--SQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLR---ERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAG-GFLHLRASLAG---DAGSIFSVTVEARDRGRPPL 735 HSP 5 Score: 128.642 bits (322), Expect = 3.809e-30 Identity = 148/547 (27.06%), Postives = 234/547 (42.78%), Query Frame = 1
Query: 631 GIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEK-RIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
G P +G V V + D NDN PRF + R +PE P+ S V + +DADAG N S+ +F V P G+II LD E G + +V D SS + + + ++D ND P+ P A + P T+V + A D D + + F + S S + D + AR L + + +R+ + T +TV D + P+F+ S +E+ GTT + +G + + S F +D ++G + LD E ++ Y+ ++ A D G P S+ + V V D NDN +S + KV EN+PP T V + A DKD N + YS+ + F ++ +G I + S LDRE Y+ ATD+ + V+I V D NDN P F + + S + A GF + ++ D D+ +A I +S+++ FS+ TG + + R L+ EDR Y++ + A D
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELR--AAVPEDAPIGSDVALVNATDADAGLNAIISY-----RLRGGDGHFSVNPSTGQIITTASLDRE-GRESYVLEVTALDGGPT-PGLSSSATLVVAVTDVNDHTPRFLNAPY-------VAYAPSSAPAGTAVFAVTARDADAGPNGDL-----RFSLSGSASAGFSVDPRRGVIHAARALQGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIV-VLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRF----TQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLP--FSIHPSTGEITVSRRLN---REDRSGYAVKVRASD 516 HSP 6 Score: 128.257 bits (321), Expect = 4.711e-30 Identity = 155/585 (26.50%), Postives = 259/585 (44.27%), Query Frame = 1
Query: 307 ILKVTLHGTDRI-------VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESS--TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKT----STNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKN----GFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDS---GKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNP 1983
I VT+ DR T I + + N ++P + ++ E AGS + + D D G NG I Y++ S + F + + G L + +LD E + Y L++ + D G +K+ V + + D+NDN P + S + P +IPE P + VL + DAD+ N +S E + + L + G + LDYE+ K +++ ++ S ++V + I+ N+ +P+ E F ++ E+ P+ V + A+D+D TV F ES S + + + +++ + LDRE E +R+I ++ + + + V I D ND P FS + H + E GT V A D DS F++ S A F+I++ TG+I LDRE LY +VA D G P + T +V ++D NDN + TS KV EN P V + A D D N+ + SD G F++ ++G++ T +DRE + ++ D + +++ + + V D NDNP
Sbjct: 720 IFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVL-LVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYP--VIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADL---FVLNQKTGVLTTQGFLDYET---KQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRF------VQREYNF-VVSESAPVGAPVGSVFATDRDAGIDGTVFYML----FGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHV-VGVSAHDFDSPPGWRTFSFLIQSGNAGRA-FSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTS--SAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLS-SSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNP 1278 HSP 7 Score: 94.3597 bits (233), Expect = 1.091e-19 Identity = 142/516 (27.52%), Postives = 227/516 (43.99%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL-ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFK---ESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKT--STNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKD----SGKNGF-VVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKEN---SP-PNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTG 1851
+ I + DVND+ P + + + E +G+ + + D D N Y+L + D F+L Q+ G+ L T LD E K Y+LT+ + + +V V+I +N+ PRF + ++ E+ PV + V + +D DAG +G + S +K + + + GEIIV QLD E +VI K+ S+ E V + I+D ND P +S + E + T V + A D D + + + N G A S+ + + +V A LDRE + ++ D +T + V + DVNDN P + + EN AG T ++A D D G F ++ S PA F++ S +G++++ +DRE K + + +D GSP L+STVT + V D+NDNP + + +V N SP P +G V D D +SD +FN D T+G
Sbjct: 846 VSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGV-LTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREY--NFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLF--GESRSKGFSVNEHTGEIIVSSQLDREREASA-TLRVIAKNAGSIRGFDVDEVLVNVAITDAND--------PPVFSSALYHGRVSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSI------NAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLLTS--SAKVTENQPAGMTV-LNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSS-SGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNP----SEARDVRVHVNYFGSPFPGGFIGDVRPRDPD----------ISD--RFNCDLTSG 1321 HSP 8 Score: 89.3521 bits (220), Expect = 3.274e-18 Identity = 70/223 (31.39%), Postives = 109/223 (48.88%), Query Frame = 1
Query: 1621 GSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN----SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEA---AGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
G P+L+ T T V V+DENDN + V E++P + V V ATD D N I Y L G F+++ +TG I+T + LDRE + Y A D S+S+ +++ V DVND+ P F LN+ ++Y + AG ++ + A D D + +++S+ S+ FS+D G ++ R+L G RD +L + D G P
Sbjct: 2 GEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLR--GGDGHFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRF------LNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSA-SAGFSVDPRRGVIHAARALQGP----RDDLTLTVRVSDGGAP 211
BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006212.1 (pep scaffold:Pmarinus_7.0:GL476841:227071:229326:-1 gene:ENSPMAG00000005617.1 transcript:ENSPMAT00000006212.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 153.68 bits (387), Expect = 1.932e-39 Identity = 164/525 (31.24%), Postives = 242/525 (46.10%), Query Frame = 1
Query: 736 IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESG-IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTT--------------DNFGFAESL-----SLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDS-VNHKTSTNIT-VDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTIDSRTGVIRSKDRLDRE-VKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATD---KDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-------KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHA 2205
IPE PV + V+++ SD D G+NG+ + + +S + S L G ++V LD E +H+ VI+ + S+ + + I++ DEND P+I+ + +E D+ +ALI SD+D V+ + D G A L L P+ D + L T LDRE +R +R++ DS V +ST + V + D NDN P F + ++ EN G V A D D GKNG VVYSI P+ F I+ TG++ + LDRE Y +VASD G P LS+T T +V + D NDN E + F V+EN P +GRV A D DN + Y++ V + F+ID TGVI DRE QH Y A D +L+S S+ V I V D +DN P F P ++ ++ + E S + + A +QYS+ LF++D TG + ++ +L HA
Sbjct: 2 IPENSPVGTPVVRVQASDPDEGENGKVQYRLASWSSSSSSSQPLDSSSGLVVVWGLLDREEADVHRL---VIVATDCAPSRPASATATLTIVVGDENDTPPEIELR-IIARTEGDAVTADDTDDDGFPIALISVSDRDSGSGGVVSLSISLDGDEESAGKDEEDEAGAAADLPFRVRRLPPSPD--RYLLETGVGLDRERRERHVVRVVAKDSGVPRLSSTAVVFVRVADANDNPPTFPRRVYEAAVAENGPPGLRV-ASVMATDADVGKNGAVVYSIERPSSSA-FRIELTTGLVTASQSLDREDAPGGYALAVVASDRGVPPLSATATVIVRILDRNDNAPQFELPDFHFYVRENQPAGNIIGRVSAWDPDEGDNGKLEYAITVV--NALFSIDPDTGVIRAGFSFDREKQHFYTLEVRARDLDQTPTSRLSS-SARVFIHVVDEDDNAPEFLAPKTNSTAVVAAADETKSASSSSATST--AKSPMAPMQYSIDGGNPRGLFAIDARTGLVTVREALTDEHA 513 HSP 2 Score: 136.346 bits (342), Expect = 1.040e-33 Identity = 132/447 (29.53%), Postives = 206/447 (46.09%), Query Frame = 1
Query: 1087 IDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFK---LVTARMLDRE---MEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQ-----VKAIDKDSGKNGFVVYSI------------------PAHDIPFTIDSRTGVIRSKDR--------LDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDRE-IQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG---TPRMCTTFRGF 2286
I EN P+ T V +QASD D E+ V + A S + ++ + +V +LDRE + + + + C S + +T+ +GD ND P+ II + + + A T + + D+DSG G V SI A D+PF + + S DR LDRE + + +VA D G P+LSST V V D NDNP YE V EN PP V V+ATD D N + YS++ S S F I+ TTG++ LDRE Y A+D+ SA++ V++ + D NDN P F++P+ + + AG + ++ A DPD+ ++ +++Y++ ++LFS+D DTG + S D E + Y+L++ A D+ T R+ ++ R F
Sbjct: 2 IPENSPVGTPVVRVQASDPDEGENGKV-----QYRLASWSSSSSSSQPLDSSSGLVVVWGLLDREEADVHRLVIVATDCAPSRPASATATLTIVVGDENDTPPEIELRIIARTEGDAVTADDTDDDGFPIALISVSDRDSGSGGVVSLSISLDGDEESAGKDEEDEAGAAADLPFRVRR---LPPSPDRYLLETGVGLDRERRERHVVRVVAKDSGVPRLSSTAVVFVRVADANDNPPTFPRRVYEAAVAENGPPGLRVASVMATDADVGKNGAVVYSIERPSSSA-FRIELTTGLVTASQSLDREDAPGGYALAVVASDRGVPPLSATATVIVRILDRNDNAPQFELPDFHFY---VRENQPAGNIIGRVSAWDPDEGDNGKLEYAIT--VVNALFSIDPDTGVIRAGFSFD---REKQHFYTLEVRARDLDQTPTSRLSSSARVF 431 HSP 3 Score: 87.8113 bits (216), Expect = 4.064e-18 Identity = 91/317 (28.71%), Postives = 138/317 (43.53%), Query Frame = 1
Query: 1081 AIIDENKPLSTSVALIQASDKDFKESDTVTCTTDN-FGFAESLSLTPTNDNNEFKLVTA-RMLDREMEKRIF-IRIICTDSVNHKTSTNITV--DIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASD---HGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---------------IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFV 1962
A + EN P VA + A+D D ++ V + + A + LT LVTA + LDRE + + ++ +D S TV I D NDN+P+F H ++EN AG + V A D D G NG + Y+I + F+ID TGVIR+ DRE ++ Y + A D + +LSS+ +HV DE+DN +P K NS V A D+ + YS+D + G F ID TG++ + L E ++ A D + A +++ +F
Sbjct: 240 AAVAENGPPGLRVASVMATDADVGKNGAVVYSIERPSSSAFRIELT-------TGLVTASQSLDREDAPGGYALAVVASDRGVPPLSATATVIVRILDRNDNAPQFELPDFHFYVRENQPAGNIIGR-VSAWDPDEGDNGKLEYAITVVNALFSIDPDTGVIRAGFSFDREKQHFYTLEVRARDLDQTPTSRLSSSARVFIHVVDEDDN------APEFLAPKTNS-----TAVVAAADETKSASSSSATSTAKSPMAPMQYSIDGGNPRGLFAIDARTGLVTVREALTDEHAGLHRLVLCARDTRHRAIALLHVFA 537 HSP 4 Score: 78.9518 bits (193), Expect = 2.237e-15 Identity = 48/180 (26.67%), Postives = 87/180 (48.33%), Query Frame = 1
Query: 355 IEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHK-SGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEII 891
+ + D ND+ P + ++ E G R + ++ D D G NG + Y++E + + ++ + + LDRE GY L ++++DRG+P S V V ILD NDN P+F F + E P +++ +++ D D G NG+ ++ ++ + F + PD +I
Sbjct: 221 VRVADANDNPPTFPRRVYEAAVAENGPPGLRVASVMATDADVGKNGAVVYSIERPSSSAFRIELTTGLVTASQSLDREDAPGGYALAVVASDRGVPPLSATATVIVRILDRNDNAPQFELPDFH--FYVRENQPAGNIIGRVSAWDPDEGDNGKLEYA-----ITVVNALFSIDPDTGVI 393
BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 216.468 bits (550), Expect = 2.061e-57 Identity = 210/705 (29.79%), Postives = 333/705 (47.23%), Query Frame = 1
Query: 175 YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLK-QLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTAR-MLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP-FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDN-PVIIETSPYEF-KVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
Y +++ KG F +D S + V++ +DRE P+ S+ + I + D+ND+SP ++ + +E G + + D D NG ++Y L +TD F + GL TLK QLD E K+ Y +T+ + D G PS+S V+V + D+NDN P+F+ S++ T + E + V +T +DAD+G NG+ S+S ++A + + + GEI LD E+ I + + D + + + ++ + I ND P P R N I E+ P T V + A+D+D + VT + S L P + +++ R LDRE + + +D S + +I V + DVNDN+P+F ++ I+E+ +T QVK DKD G NG + S+ FTIDS TG + SK LD E YQ + A D GSP S+T + + + NDN P + SP + + E+ NT V ++ ATD D + + + + F ID+++G+I +LDRE Y AT+ + S+ I V DVNDN PVF N + SL G ++ K+ A D D+ E+A++ Y ++ +S F ++ TG + +R LD ED+ YSL + A D G P
Sbjct: 515 YRLISGNVKGA--FNIDANSGSIRVSSELDRET-TPSYSLQVEA-RDGGSTSRSSSTRVTIALQDINDNSPIFQ-GPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTSTGLI--TLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLY--TCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMA--FAMDRFTGEITTRVPLDRET-IASYSLTINADDGSLVRFMAATTVNISIADE--NDNQPTFTG-PSRFN-------ISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRS-----GILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTV-LQVKVEDKDEGSNGAITLSLSGEGSDNFTIDS-TGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFV--SPAQVTSIPEDVAINTHVVKLNATDSDGTPLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVF---NPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYE-LSVGDTSKFEVNPATGLVTTKRPLD---REDQASYSLRVTAMDHGKP 1181 HSP 2 Score: 209.92 bits (533), Expect = 2.428e-55 Identity = 202/649 (31.12%), Postives = 321/649 (49.46%), Query Frame = 1
Query: 355 IEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFK-------LVTARMLDREMEKRIFIRIICTDS---VNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
I +DDVND++P + ++ +K E GS + D D G N ++ Y+L S ++ V G+ ++T DRE K+ Y++ + + D G PS+SG+ VE+EILD+NDN P FS++ + T + E + + + ++ +T SD D G N + +SF+ T+ A + L G + V R LD+E + + + D S + S + I ++D ND P F P S + EN P T V+ A+D+D + + FG + ND+ F + A+ D E + R + + D V + T+ +T+ I DVND+SP FS + I E+ G+T V A D DSG G + Y + + ++ F ID+ +G IR LDRE Y + A D GS SS+ + + D NDN I + PY F+V E+S P +G+V ATD D N + Y+L +D F+I+ +TG+I K++LD E + +Y A D S+ ++V + V+DVNDNPP F SL + ++ AAG ++ + A D D + +I YS+++ + F++D+ TG + + LD E YSL I A D
Sbjct: 156 ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQGV-IRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQY--TASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHA--FTLDAVTGVVTVSRSLDFEQR-SSYALGLSVTDRGSP--PLTDTSHLLINVNDINDNPP--VFSPSAYQSR-----VKENTPAGTQVS---ATDRDSSTNGALV-----FGIIKG------NDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTA-QVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTV-VTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQ-GPYVFRVSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTD--VFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFA---KSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLD---RETIASYSLTINADD 764 HSP 3 Score: 198.749 bits (504), Expect = 9.444e-52 Identity = 201/643 (31.26%), Postives = 314/643 (48.83%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVT---IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL-ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL-------VTARMLDREMEKRIFIRIICTDSVNHKTS--TNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN-SASSI--VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPD 2085
F +D + +++V +DREA+ S N I K + G V+ + I + D ND+SP + N+ +EG GSR ++ + D D G N Q+ Y++ T F + +G+ L K+++RE Y LTI ++DRG P + E+ V + D+NDN P F++ + + + E + VL + D+D G N +S K + + G I+ LD+E ++ +V D + ++++ V I + + ND P + A + EN P STSV + ASD+D +FG + S S+ D+++F + TA +LDRE+ I++ TD+ N S T +T+ I D NDNSPKF + SI EN A ++ + ++ A D D G N + Y++ +D F I + +GVI LDRE K+ Y I A DHG+P +S++T V V D ND+ +I +S V+EN P T V R++A+D D N + +SL F +D TTG I TK LDRE Q Y R DK N S SS+ V+I V D +DN P F+ + ++++S G S+ ++ A D D
Sbjct: 1251 FRIDSTTGRITVVGVVDREALA---SYNLTISAKDS--GVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGV-LTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGS--VRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDE--KRFKINSTSGVIMTTTPLDFEEK-SQYGLEVTATDS-----KYTAKTNVTIRVINLNDITPAFT-------QQNYTASVRENSPTSTSVVKVSASDRD------------SFG-SLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILEN-SAPSSFSFKLAATDADEGTNARITYNLSRND-AFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQ---PTEYNVTISESLPRGASIVQVTARDID 1852 HSP 4 Score: 197.978 bits (502), Expect = 1.526e-51 Identity = 216/764 (28.27%), Postives = 365/764 (47.77%), Query Frame = 1
Query: 70 SPDHIYRIKEELPI-THIIGYLNNDIPKFRSTDSTG----YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTD-----RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGS-RKSIPI--------SFDPDFGDNGQIKYTLE-SSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTN--ITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAH--DIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDN-QTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTF 2277
SP + I E++ I TH++ K +TDS G ++I+ +F +D S +SV R+DRE ++ N ++++ T G+ TIR+ DVND++P +FN G +A S +++PI + D D G+N ++ Y L T F + GL + T + LDRE ++ Y L + + D G PS+S + + I D+NDN+P+FS S + T + E S +L++ SD DAG NG ++S + ++ + G I V+ +D E+ + ++ + KD + ++ + + ++N P+ ++ET + IDE + + VA++ A+D+D + S+ + G + ++ N L + ++RE + I +D + +++ +TV + DVNDN P F+ S++EN A +T+ V A D D G N + YSI + + F I+S +GVI + LD E K+ Y + A+D K ++ + V + ND Y V+ENSP +T V +V A+D+D+ ++ YS+ DS KF+ID+ +G+I T LDRE+ Y + TD N S + V I + D NDN P F + S + + S + F K+ A D D+ +ARI Y N + F + +G + L + LD E++ Y L I+A D GTP ++
Sbjct: 999 SPAQVTSIPEDVAINTHVV--------KLNATDSDGTPLTFDIV--EGNAGSSFKIDQSSGLISVAKRLDRE-----TTANYTLVVRATETGSQGESVYNNATIRVL--DVNDNAP---------VFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKFEVNPATGL-VTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKY--TLTVTENTANGSNILRVLASDPDAGANGRVTYSII--SGNHGNAFRIDSTTGRITVVGVVDREA-LASYNLTISAKDSGVPPWVSTAFVAITVADENDNS--------PIFASNETSYG-IDEGVSIGSRVAVVTATDRD-EGSNAQVFYSIVRGDTSAFAINAMNG----VLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVREN-SAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDS---KYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSF---KLAATDADEGTNARITY---NLSRNDAFMIGASSGVITLAQPLD---RENKSTYDLAIQARDHGTPPQASSI 1703 HSP 5 Score: 188.348 bits (477), Expect = 1.587e-48 Identity = 199/708 (28.11%), Postives = 339/708 (47.88%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTL--HG---TDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL-------VTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAH--DIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN--SASSI-VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCT 2271
F ++P + ++ +DRE S L+VT HG + I + I+D+ND+SP + +K+ + E GS ++ DPD G NG++ Y++ S + F + G + + +DRE + Y LTI + D G+P V + + D NDN+P F+++ + I E + + S V +T +D D G N + +S +TS ++ + +G + V ++++ E+ + + + D S +S+ + ++++D ND P NS++ + EN STSV + A D D + + S+ ND FK+ +T LD E + + + + TDS + TN+T+ + ++ND +P F+ S++EN T+ K V A D+DS G + YSI F+ID R+G+I + D LDRE+ +LY + +D G+P LS+ + + DENDN ++S Y + ENS P++ ++ ATD D N I Y+L S + F I ++GVI LDRE + Y A D ASSI + + V D+ND+ P+ NSS S+ + + +I+A D D +A + +S+++ ++ S+F+LD TG + + LD E + Y+L I D G P + +
Sbjct: 1146 FEVNPATGLVTTKRPLDREDQASYS-------LRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTG-RITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASN--ETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTS---AFAINAMNGVLTVKKEINRET-VPTYTLTIRASDRGSP--MMTSDKELTVVVNDVNDNPPVF-------NSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVL-----------RYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDS-KYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVK-VSASDRDSF--GSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNL---SRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLI---NSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLD---REQQAVYTLRIGVADKGNPSLSS 1806 HSP 6 Score: 171.785 bits (434), Expect = 2.886e-43 Identity = 187/660 (28.33%), Postives = 297/660 (45.00%), Query Frame = 1
Query: 343 VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLES--STDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKS-----YFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHA-SLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
T+ IEI DVND+ P + ++ +E G+ + D D G+N ++Y+ S + F L G+ + + LD E +S Y L + TDRG P + + + + DINDN P FS S ++ + E P + +++ +D D+ NG F I K + + G I + + DYE+ ++D V +D + Y ++V I I D ND P F P + + I E+ + ++V + A+D D + + + ++ D N + + LDRE +++ D S + +ST +T+ + D+NDNSP F + + E+ G QV A D D NG V Y++ + F+I++ TG+I K +LD E K Y + A D G+P SS V VDD NDNP S Y V EN V V ATD D N I YS+ +++ F +DR TG I T+ LDRE Y A D A++ V I + D NDN P F P + ++S G + ++ A D D + + Y++++ + F LD +G L ++ +LD E Y+L ++A D G+P+ T
Sbjct: 255 ATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGV-VTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSR--VKENTPAGT---QVSATDRDSSTNGALVF-------GIIKGNDDGVFTIDGSTGIISIAKSPDYENKT-RYDLTVQARDRGVPVKY---DTAQVTIFIEDVNDHSP--VFSPSNYSKQ-----IPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNI----DANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYV-FRVSESSSPGHQIG-QVAATDADDSSNGDVRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGP----SRFNISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLD---RETIPSYTLVVKASDAGSPQQSIT 877 HSP 7 Score: 168.703 bits (426), Expect = 2.093e-42 Identity = 173/612 (28.27%), Postives = 272/612 (44.44%), Query Frame = 1
Query: 487 NGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRF--STSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESG------IHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLV-------TARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIG--DVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
N Q +T++SST G T ++ DRE +S Y+LT+++ D GR V +++ D NDN P F ++ +F I E P V + +T +D D+G N ++S E + + GEI + LD+E+ I FD K H + I + D ND P +T + E+ + + V + A D D G LS + + + + V T DRE + + + D + S TV+I DVNDN P FS S+ E++ G V A DKD+G N + YS + + FT+D+ TGV+ LD E ++ Y + +D GSP L+ T L++V+D NDNP + S Y+ +VKEN+P T +V ATD+D+ T + + + +D G F ID +TG+I D E + +Y A D+ + ++ V IF+EDVND+ PVF N S + G ++ + A D D R++Y +++ F++D ++G + + LD E YSL +EA D
Sbjct: 7 NDQGMFTIDSST---------GSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFN----IRENTPAAQVAI-VTATDRDSGTNAAITYSLFSGE----NKFMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGK-----HTTF--------VPLITVDDVNDNAPFFALSVYKTG-------VYEDVAVGSIVRQLTAVDLDV-------------GINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAM-VTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT---QVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQ---IPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELD---RETTPSYSLQVEARD 557 HSP 8 Score: 156.762 bits (395), Expect = 1.238e-38 Identity = 120/350 (34.29%), Postives = 176/350 (50.29%), Query Frame = 1
Query: 1249 TARMLDREMEKRIFIRIICTDSVN--HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
T R DRE E R + ++ D+ N HK T + +D+ D NDN+P+F N +I+EN A V A D+DSG N + YS+ + + F ++S+TG IR+ LD E K+ Y I A D +T L+ VDD NDN S Y+ V E+ + V ++ A D D N + YSL D+ F +D + GVI TK DRE + YQ A D + S + V I + DVNDN PVF +S+ + S+ A G ++ + A D D+ +A ++YS + + F+LD TG + + RSLD E R Y+L + D G+P + T
Sbjct: 24 TGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQV--AIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGK----HTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSL-VSGDTSYFTVD-SQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVF---SSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLD---FEQRSSYALGLSVTDRGSPPLTDT 359 HSP 9 Score: 155.606 bits (392), Expect = 3.045e-38 Identity = 192/677 (28.36%), Postives = 305/677 (45.05%), Query Frame = 1
Query: 316 VTLHGTDRIVTIR-------IEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTS-IFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLR-QLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIK--FYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL------VTARM-LDREMEKRIFIRIICTDS--VNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGT 2256
+T+ DR V ++ I I+DVNDHSP + + + E GS + D D G G+++Y L S F + G ++ +LDRE Y L + + D G S+S V + + DINDN+P F +FR + E+ + ++ +DAD NG+ ++ S F + +I L+ QLDYE K + V + RSS + V++++ D ND PQ Y + EN +V + A+D D + + S S+ N+N F + +T R+ LDRE + I D V +T + + I D NDN P F+ +I E+ GT Q+ A D+D G NG V Y+I + + F +D R+G++ + LDRE Y ++ ASD GSP+ S T + V V D NDN E S + +++E++ ++ V +V DKD N I SL S F ID +TG +++K+ LD E YQ A D + SA++ V I + +VNDN P F P + + SI E + T +V + D + + + +V S F +D+ +G + + + LD E +Y+L + A + G+
Sbjct: 446 LTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSG-SIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGPYVFR----VSESSSPGHQIGQVAATDADDSSNGDVRYAL-----SDNTDVFSINTSTGLITLKTQLDYE---KKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYT---------CTVGENLAAGVAVCYVTATDADSGANGKI-----------SYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFT-GPSRFNISEDSPTGTRVG-QLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSG-EGSDNFTID-STGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSP-AQVTSI----PEDVAIN-THVVKLNATDSDGTPLTFDIVEGNAGSSFKIDQSSGLISVAKRLD---RETTANYTLVVRATETGS 1076 HSP 10 Score: 145.206 bits (365), Expect = 4.909e-35 Identity = 121/398 (30.40%), Postives = 195/398 (48.99%), Query Frame = 1
Query: 1087 IDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP-FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
I EN P + VA++ A+D+D + +T + F+ + E + VT LD E + +RI D + ITVD DVNDN+P F+ ++ + E++ G+ +Q+ A+D D G N + YS+ + D FT+DS+ GVIR+K DRE K YQ + A D GSP S T + + D NDN + ++ Y V E+ + V A+DKDN + YS + + F +D TGV+ LD E + Y TD+ + + +S ++I V D+NDNPPVF P++ + + AG T++ A D D + + + ++ +F++D TG + + +S D E++ Y L ++A D G P
Sbjct: 79 IRENTP-AAQVAIVTATDRDSGTNAAITYSL----FSGENKFMMNSKTGEIRTVTP--LDHETKDSYTMRISAFDGKHTTFVPLITVD--DVNDNAPFFALSVYKTGVYEDVAVGSIV-RQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQ-GVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFS-PSAYQSRV--KENTPAG---TQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPD---YENKTRYDLTVQARDRGVP 456 HSP 11 Score: 96.6709 bits (239), Expect = 3.045e-20 Identity = 82/250 (32.80%), Postives = 126/250 (50.40%), Query Frame = 1
Query: 1522 FTIDSRTGVIRSKDR-LDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
FTIDS TG I + R DRE ++ Y+ ++A D + ++ V DENDN + Y F ++EN+P V V ATD+D N I YSL S KF ++ TG I T + LD E + Y R A D ++ + + +I V+DVNDN P F + S+ + A G + ++ A D D +AR+ YS+V+ +S F++D G + + + D E + Y + + A D G+P
Sbjct: 12 FTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPA-AQVAIVTATDRDSGTNAAITYSL--FSGENKFMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHT-TFVPLITVDDVNDNAPFFAL---SVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGD-TSYFTVDSQ-GVIRTKGAFD---RETKASYQVALRAQDGGSP 249 HSP 12 Score: 58.9214 bits (141), Expect = 1.043e-8 Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 1
Query: 1795 YSLDYVSDSGKFNIDRTTGVIVTKS-KLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIV-AEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
YS+ +D G F ID +TG I T K DRE + +Y+ A D N ++V+I V+D NDN P F LNS + +E + IV A D D +A I YS+ + + + F ++ TG + LD H E +D Y++ I A D
Sbjct: 1 YSIMDGNDQGMFTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFP-----LNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGE--NKFMMNSKTGEIRTVTPLD--H-ETKDSYTMRISAFD 146
BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4]) HSP 1 Score: 216.083 bits (549), Expect = 3.579e-57 Identity = 214/654 (32.72%), Postives = 313/654 (47.86%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESS--TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLV-KPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD-SVNHKTST-NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI---PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKE--AAGFSLTKIVAEDPDDKESARIQYSVV-NEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+ I + DVND+ P ++ N + E + G + D D G NG++KY + +S ++ + E + +K+LDRE Y L + + D+G P +S + V++ +LD+ND TP+FS ++ T I E +PV +V + +D D G NGE F ++F + + +GE+ V ++LDYE I F+ V +D +++ V+I + D ND PQ +T +I EN + +QA DKD + +T F F ++ L + + N + LDRE + I D V K T IT+ + D+NDN PKFS H SI EN GT+ QVKAID DSG VVYSI HD F I+ + G+I L+ K++Y F + ASD LSST V+V D N + + Y +VKE++ T V V+ATD+D N I YS+ + +F++D TTGVI T LDRE Y+F ATD A S V I + DVNDN PVF P S +E G + ++ A D D ++A+I YS N F++D G + + LD E Y L + A D GTP
Sbjct: 114 LTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSAT--IREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGND---MNFFSINRINGEVRVKQKLDYEM-IGVFNLLVTAQDKGQP--FLYNQTTVDIALIDVNDNAPQFVSSHFQT-------MIPENYAVGQEFYRVQAYDKDHGTNGEIT-----FSFMQN-DLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSV-LQVKAIDPDSGPTN-VVYSIVSSSGHDRCFRINPQ-GLITLSCTLNYNTKHVYVFSVSASDG---MLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVP--EFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKP-----SYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLD---RETIPEYELTVVATDQGTP 730 HSP 2 Score: 202.216 bits (513), Expect = 9.379e-53 Identity = 192/701 (27.39%), Postives = 319/701 (45.51%), Query Frame = 1
Query: 175 YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGT---DRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDT-FILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDN-PVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDS-GKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKL---NSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEA 2241
Y ILN D F + +S ++V ++DRE + PT ++ ++ G VT++I + DVND +P + + E + + D D G NG++ + + S D F + ++ ++LD E + L + + D+G P + V++ ++D+NDN P+F +S F+ +IPE V ++ D D G NGE +FSF + + + + G I + +LD E + KF F + +D + +++ I + D ND P+ + E I EN TSV ++A D D ++ V + G + P L+T K +++ + ++ + V++ D N ++P+F +KE+ GT+ V A D+D+G N + YSI F++D TGVI++ LDRE + Y+F + A+DHG P+L + +H+ D NDN PV ++ S YE KV+E+ P V V A+D D N I YS D G F ID T G+I T LDRE +Y+ ATD+ AS V + +EDV D+PP+F+ P L +++ + + A+ D + YS+V +F ++ +TG + LD E + Y L + A
Sbjct: 165 YCILN-SDGDNSAFSIGEVSGAVTVMKKLDREKV-PTYTLQ----VQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQ--TMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFS----INENTGGISIKEELDREK-VPKFTFGIKARDKGVP--FKEGTAQITITLLDINDNPPKF-------SQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQG------LITLSCTLNYNTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSV-LTVLATDRDTGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPS-YEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKP---LYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLD---YETQSEYRLTVRA 829 HSP 3 Score: 197.593 bits (501), Expect = 2.746e-51 Identity = 191/621 (30.76%), Postives = 291/621 (46.86%), Query Frame = 1
Query: 469 DPDFGDNGQIKYTLESSTD----TFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQI--KFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEF-------KLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIG--DVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDN--QTIFYSLDYVSDSGK---FNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAA--GFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRM 2265
DPD G NG I+Y++ S + T+ + + + T + LDRE + + + D G PS G +++ + +LD+NDN P F +I+ IPE + VL + SDAD+G NGE + ++ ++ + + G + V+++LD E + + +V +D + RS+ V+I + D ND PQ K Y A I E+ P++ V ++A+D D + V F E +S ND N F ++ + LD EM + + D TVDI DVNDN+P+F + I EN G + V+A DKD G NG + +S +D+PF+I+ TG I K+ LDRE + F I A D G P T + + D NDNP Y + ENS T V +V A D D+ + YS+ VS SG F I+ G+I L+ +H Y F A+D + S++++V + V D N + P FK S S KE A G S+ ++A D D +A+I YS+ FS+D+ TG + SLD E D Y ++ A D G P++
Sbjct: 46 DPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAAD--IPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGD-NSAFSIGEVSGAVTVMKKLDREK-VPTYTLQVQAQDQGNP--PRSATVTVKITLLDVNDCTPQFSKKVYS---------ATIREDVPVNQLVTTVRATDCDQGSNGEV--------FFEIVS---GNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYR-VQAYDKDHGTNGEITFSFMQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSI--VSSSGHDRCFRIN-PQGLITLSCTLNYNTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKR-----RSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIAT--LVPEFSVDETTGVIKTAGSLD---REKVDTYRFEVTATDHGIPQL 626 HSP 4 Score: 191.43 bits (485), Expect = 2.184e-49 Identity = 193/718 (26.88%), Postives = 327/718 (45.54%), Query Frame = 1
Query: 91 IKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDR-------IVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLS-LTP--TNDNNEFKLVTARMLDREMEKRIFIRIICTDSV--NHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAH---DIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSL 2190
I+E++P+ ++ + S +EI++ D + F ++ I+ ++ V ++D E I + + + D+ T+ I + DVND++P + + + + E G ++D D G NG+I ++ + F + + G + ++LDRE + I + D+G+P K G ++ + +LDINDN P+FS + + I E + VL++ D D+G +S F + P G I + L+Y + H + F V D SS + V + ++D N P+ K R+ S A + E+ L TSV + A+D+D T N + S++ L P + D + TA LDRE + TD K + + + I DVNDN P F ++E++ G +V A D D GKN ++YS ++ FTIDS G+IR+ LDRE Y+ +VA+D G+P ++V V ++D D+P + E YE V E++PP +PV V A +D + YS+ + F+I+ TG I T KLD E Q +Y+ AT + VM++++D+NDN PV + + ++N A + KI A DPD S ++ + V+ +L+ +G L + + L
Sbjct: 243 IREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGND--MNFFSINRINGEVRVKQKLDYEMIG---------VFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINENTG-GISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTS--IAENSRWGTSVLQVKAIDPDSGPTNVVYSI---VSSSGHDRCFRINPQGLITLSCTLNYNTK-HVYVFSVSASDG-----MLSSTALVYVNVTDSNTHAPEFK---RRSYS----AEVKEDASLGTSVLTVLATDRD---------TGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRV-IEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTVRATLSPFFTETTVMVYLKDINDNTPVLEAFHMNINVQEGKVPPEARY---KIPAYDPD--VSDKLTFKVMEGNAKEWVTLNATSGELSVNKKL 915 HSP 5 Score: 128.642 bits (322), Expect = 5.663e-30 Identity = 137/491 (27.90%), Postives = 228/491 (46.44%), Query Frame = 1
Query: 688 DNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLV-KPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVT-CTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIG--DVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIP-FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVN 2124
+N P+FS + + E V +VV ++ SD D+G NG +S SP++ ++ +YF + + G I R LD E F F+V +D E + + ++ ++N + Y A I E+K + V ++ASD D + V C ++ G + S+ + + + LDRE +++ D N S +TV I DVND +P+FS + +I+E++ V+A D D G NG V + I +D+ F+I+ G +R K +LD E+ ++ ++ A D G P L + T + + D NDN +S ++ + EN RV A DKD+ T I +S ++ + F+I+ TG I K +LDRE K+ F A DK ++ + I + D+NDNPP F S++ G S+ ++ A DPD + + YS+V+
Sbjct: 15 NNPPQFSR--LQEDASVSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDRHF-FRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYA---------ADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSG----AVTVMKKLDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTT-VRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFS--FMQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEY---HTSIAENSRWGTSVLQVKAIDPDSGPT-NVVYSIVS 482
BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 211.846 bits (538), Expect = 6.674e-56 Identity = 218/701 (31.10%), Postives = 334/701 (47.65%), Query Frame = 1
Query: 241 LSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESS--TDTFILVQE-----HGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIK--FYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFK--------LVTARMLDREMEKRIFIRIICTDSVNHKTST--NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP-AHDIP-FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATD---KDNQTIFYSLDYVSDS---GKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNS---ASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
+S RIDRE S + L+ TL+ +++ +++++++DD+ND+ P + + + E + I + DPD G+NG + YT+ S T TF L L + T K LDRE Y+L I +TDRG P+ G + + ILD ND+ P F+ + + + I T P S +L+++ +D D+G NG+ ++ + L G I + LD+E + + F VI D ++ + V I + D ND PQ+K + P + AI EN ++T++A I +DKD S+T + T L +T +D FK + + LDRE+ + + TD ST + +D+ DVNDNSP F+ N +I E G+ Q+ A D D G NG V YSI +D+ F +D ++G++ + LDRE + I A DHGS + + T V + D NDN S Y+ + E + V +V ATD DN I Y + SD+ G F ++ TGV+ TKS+LDRE + Y F A D + +S V + + D+NDN PVF P SI E G L ++ A D D+ +A I Y ++ + FS+D TG + SLD E + +SL I A D G
Sbjct: 51 ISTTARIDRETTTQIS-----LQLR-TLNPSNQPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGS-IAENTKPGVS-ILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVK-NSYTFNVIASDGGVP--SKNDLATVTINVLDTNDNSPQLKITYLPPHNGDK---AIRSENSLINTNIAYILVTDKD---SNTNSQT--------ELKITNGDDEGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYV-LQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISS-SDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVF-YPVEYFASI--MENEPPG-KLLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASLD---HEVEEFFSLIISAKDGG 717 HSP 2 Score: 193.741 bits (491), Expect = 2.876e-50 Identity = 208/713 (29.17%), Postives = 320/713 (44.88%), Query Frame = 1
Query: 277 CPTSSINCFIILK-----------VTLHGTDR-------IVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLE----SSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRP----TKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIA----KSYFLVKPDGEIIVLRQ--LDYESGIHKFDFKVIIKD-----HASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL-------VTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP----FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD---KLNSASSIVMIFVEDVNDNPPVF--KMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEA 2241
CPT S C I K + + TDR I I I D NDH+P + N + E G + D D G NG IKY ++ S F L G+ ++T + LD E K+ Y +I++D G+PSK+ V + +LD NDN+P+ + P I E + + + + +D D+ N + TE I + F V+ G + Q LD E + ++ + + D ++LG+ + V ND P +N+ T A I E + V + A+D D ++ TV S S+T ND F++ TA+ LDRE + I I D S ST +TV I D NDN P+F + +I E G T QV A D DSG NG + Y I + D F ++++TGV+ +K +LDRE K+LY F ++A DHG P+L S+V + + D NDN + Y + EN PP + +V ATD D N I Y + +++G F+ID +TGVI T + LD E++ + A D K + +++V + V + DN PVF +M N ++ Y+ +L V DK + I Y++V+ ++LF +D G + + +D E++ Y L + A
Sbjct: 150 CPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGV-IRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQ-------TELKITNGDDEGCFKVEFLGFYFIQLQKPLDREL-VPFYNLTLNVTDKGVPSRSTLGFVLIDVTDV-------NDNSPA-----FTSNAYT--ANISELAQNGSYVLQLNATDPDEGDNGTV-----------SYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATV-LQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGKLL-QVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTV------YENVPKGTLVGRVYATTKDKNGS-ISYAIVSGDPTNLFLVDSTGGIIKINGDMD---REEKAQYLLAVIA 816 HSP 3 Score: 179.489 bits (454), Expect = 8.761e-46 Identity = 196/671 (29.21%), Postives = 302/671 (45.01%), Query Frame = 1
Query: 340 IVTIRIEIDDVNDHSPNWKI------NKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFIL-VQEHGLY-LQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVK-PDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFK-------LVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVD--IGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPA--HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFA---TDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSL-DGAHAEDRDHYSLDIEACDMGTPRMCTTF 2277
+ T+ I + D ND+SP KI N K I +E + + + D D N Q + + + D V+ G Y +Q K LDRE Y LT+ TD+G+PS+S V +++ D+NDN+P F+++ + T I E S VL+L +D D G NG S+S + +F V G + + LD E + + +DH S ++ + V + I D ND P+ M+++ + I E + +V + A+D D + DN +S + N F+ L T LDRE + ++ D + + +++ V+ I D+NDN+P F SI EN G QV A D D G N + Y I ++ F+IDS TGVI + LD EV+ + II A D G+ + T V V ++ DN + Y F V EN P T VGRV AT KD N +I Y++ + F +D T G+I +DRE + +Y A T K SA + V I V D NDN P F ++S + + G + A D D ++ ++Y + + L ++ +G + L R L DG D Y++ + A D G+P +T
Sbjct: 296 LATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAY--TANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGND---LGWFQVDFQSGLVTTAKPLDREQ-VSSVTITITAQDHGSA--PKTGSTTVTVTIIDGNDNKPRF----MKSSYK---GTISEGASIGATVLQVSATDVD---------SGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGKLL--QVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNGSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQF---STSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNA-EGLLWINSTSGVIKLARKLTDG----DETQYTVQVLASDSGSPPQHSTM 932 HSP 4 Score: 147.517 bits (371), Expect = 9.071e-36 Identity = 191/714 (26.75%), Postives = 315/714 (44.12%), Query Frame = 1
Query: 130 LNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGT---DRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLY--------LQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQ--SVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTN----DNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIG--DVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAH-DIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD 2193
LN P + Y I D G F +D S ++ +DRE + + I + HG+ T+ + I D ND+ P + + +K +EG G+ + D D GDNG+I Y + SS Q +GL+ L T QLDRE KS Y T+++ D G P ++VE+ I DINDN P +F P + M + +L++T +DAD G N S+ + ++ + G I L LD+E + +F F +II + + V + + ++ D P + Y M F + EN P T V + A+ KD S + + + PTN D+ + +DRE + + + +I S TV+I D NDN+P+FS + + + I G A+D D+GKNG V Y + ++ + I+S +GVI+ +L + Y ++ASD GSP ST+T +H+ ++P S Y V + P + V+A D+D N +FYS+ ++ G F I + + KS L + ++ Y ATD SAS V I+++D ND+ +F N++ +++ + G + +VA D + I YS+++ + S F++D +G + + LD
Sbjct: 447 LNATDPDEGDNGTVSYSITGGNDLGW--FQVDFQSGLVTTAKPLDREQVSSVT-----ITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSD-----AQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAP-----VFYPVEYFASIMENEPPGKLLQVTATDADEGTNAVISYDIIGGNNN--GNFSIDSSTGVISTLASLDHE--VEEF-FSLIISAKDGGNKYAAKTAVVNVTVLNKADNLP-VFLYEMYN-----FTVY-ENVPKGTLVGRVYATTKDKNGSISYAIVSGD----------PTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVV-YNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMT--IHITLSINHPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIFPGGKLYIRKSLL-QALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFV--NNTFR-FAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSE--SHFAVDVRSGQITTRVRLD 1112 HSP 5 Score: 138.658 bits (348), Expect = 4.422e-33 Identity = 117/361 (32.41%), Postives = 175/361 (48.48%), Query Frame = 1
Query: 1240 KLVTARMLDREMEKRIFIRIICTDSVNHK--TSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREI----QHKYQFRAFATD----KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLT--KIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCT 2271
+L ++ LDRE + + TD+ N ++ I + +GD ND P F ++ ++I E+ G+ + A DKD G+NG + YSI ++ F ++S TG + LD E LY+ I A DHG LSSTV V+V D NDN + T P V+EN PVGR A+D+D T I +S+ + S F+++ T I T + +D E + +Q ATD KL++ SI + V D NDN P F P ++ AAG SL I AEDPD + ++ YS+++ + F+L TG L + + ++ Y L I+A D G P T
Sbjct: 1215 ELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLV-INLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSIT-VQVTDENDNSPGFVSPPAA----------AAGSSLNVMTITAEDPDRNSNGKVTYSIISGN-NGYFNLHPSTGQLQMIHQI----PDNPTIYQLTIQASDGGQPSRQT 1558 HSP 6 Score: 138.272 bits (347), Expect = 5.382e-33 Identity = 186/711 (26.16%), Postives = 321/711 (45.15%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRI---VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDT--FILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLR-QLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKF--SDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPA--HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDN---QTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHK--------YQFRAFATD-KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFR 2280
F L+ + L +++DRE T S+ F +L HG ++ V + + I D+ND++P + ++ E E G + + D D G N I Y + + F + G+ + TL LD E + + L I + D G + V V +L+ DN P F ++ T + E +P ++V ++ + D +NG S++ + + + FLV G II + +D E K + + + S+++ V I + D ND PQ T I+D + + A+ D AE L L + + KL AR L E + ++++ +DS + + +T+ I ++ PKF S + H+ + + + V A+D+DSGKNG + YSIP + F I G + + L + +K Y I+ A+D G P S++V +++ D ND+ + + + F V ENS P T VG ++A D+ + I YSL +S F +D +G I T+ +LDRE K Q A D + +IV++ V D+NDN PVF + ++ +I++S G + +I A D D+ ++A+ YS+V+ F ++ TG L+L ++LD E Y+L ++A D + +T +
Sbjct: 580 FELNTQTGVLWTKSQLDRE----TKSLYSFTVLAKD-HGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGKLLQVTAT-DADEGTNAVISYDIIGGNNNGNFSIDSSTGV-ISTLASLDHEVEEFFSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFT--VYENVPKGTLVGRVYATTKD--KNGSISYAIVSGDPT---NLFLVDSTGGIIKINGDMDRE---EKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFS---------TSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGL-LWINSTSGVIKL--ARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLSINHPPKFTLSSYVTHVLASQPL---SYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGI-FPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSL--ISSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVF---SRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLSKTLD---RETTSSYNLVVKATDASNANLYSTAK 1249 HSP 7 Score: 135.191 bits (339), Expect = 4.666e-32 Identity = 167/707 (23.62%), Postives = 308/707 (43.56%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKV-TLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTV-TCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDRE-----MEKRIFI---RIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI--PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD-KLNSASSIVMIFVE--DVNDNPPVFKMPNSSLNSISLSYKEAA--GFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD-GAHAEDRDHYSLDIEACDMGTPRMCT 2271
F++D + +N +DRE + +I +V T+ T+ IE+ D ND++P + + V + G + D D G NG ++Y L S+ + + + ++ ++L ++ Y + ++++D G P + + + + L IN + P+F+ S + T ++ + P+ + D D+G+NG+ +S + F + P G++ + + L ++ +D V D + S + I S ND + N+ FA+ + + P + L+ + + D V + + FA D ++ T LDRE ++I + D+ + + V + D+NDN+P FS + +++ E G+ + +KA+D D G N YS+ + F I+S TG + LDRE + Y ++ A+D + L ST + V D ND + S Y + E++ + V + A+DKD N I YS+ + + F+++ TG ++ LD E Y+ A D L SS V + V DVNDN P+F ++L+ +E GF + + A D D +A I +S+ ++ S FS++ T + ++D RD + L + A D G+P++ T
Sbjct: 787 FLVDSTGGIIKINGDMDREE---KAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHIT-LSIN-HPPKFTLSSYV-THVL-ASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGN---EEGLFGIFPGGKLYIRKSL-LQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDS--NDHRS------LFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVYSLISSESHFAV--------DVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFR-IKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPT-----QPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLST 1460 HSP 8 Score: 134.806 bits (338), Expect = 7.525e-32 Identity = 167/615 (27.15%), Postives = 274/615 (44.55%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHG-----TDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYP----MRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREM----EKRIFIRIICTDSVNHKTST--NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTN-KQVKAIDKDSGKNGFVVYS-IPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSP-KLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIAT---DKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDRE-IQHKYQFRAFATDK----LNSASSIVMIFVEDVN 1974
F +D S +++ R+DRE + + N +I+ ++ D+ + I + + D+ND++P + + + +E GS + D D GDN + Y+L S T D F + G L K LDRE S Y L + +TD + ++E+ + D ND P F S + T I E + S+V+ L SD D GQNG +S + ++A + + G +IV + LD+E+ ++ + +DH + SS V + + D ND P P +R N TGF V ASD+D + + + ++++ S T + ++ ++ T +D E + ++ TD + K ST +ITV + D NDNSP F AG++ N + A D D NG V YS I ++ F + TG ++ ++ + +YQ I ASD G P + + TV ++ P ++ Y+ V EN T V V+A N I Y L S G F + ++TGV+ T +DRE + + +A DK ++S+ V I V+DVN
Sbjct: 1096 FAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVI-VTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTG-ELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDY--TVNITEDALIGSLVINLNASDKDIGQNGLIKYSI--SNGNLAAMFDVESATGRLIVAKSLDFET-TQLYELTITAQDHGLI--PLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFP-----------VGRCTASDRDTGTNAHIAFSM----YSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVS-------PPAAAAGSSLNVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTGQLQMIHQI-PDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPT-FSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677 HSP 9 Score: 124.79 bits (312), Expect = 9.056e-29 Identity = 134/444 (30.18%), Postives = 204/444 (45.95%), Query Frame = 1
Query: 1021 NDEYPQIK--FYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTV--TCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD----SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP----FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETS---PY---EFKVKENSPPNTPVGRVIATDKDNQT---IFYSLDYVSDSGKFNIDRTTGVIVTKSK-LDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGT-PRMCTT 2274
ND P+ +Y +R I E+ ++T+ + A+D D + TV T + + SL T + ++T + LDRE + I TD ++ NIT I D ND++P F+ N SI EN G + +V A D+DSG NG + Y+I I F +DS TGVIR+K LD EVKN Y F ++ASD G P + T ++V D NDN ++ + P+ + ENS NT + ++ TDKD+ T + D G F ++ + K LDRE+ Y TDK S V+I V DVNDN P F S+ + ++S G + ++ A DPD+ ++ + YS+ F +D +G + + LD E ++ I A D G+ P+ +T
Sbjct: 89 NDNEPRFPTLYYTLR---------IRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINIT--ILDENDHAPVFTQNSYLGSIAENTKPGVSI-LRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFT---SNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLD---REQVSSVTITITAQDHGSAPKTGST 514 HSP 10 Score: 85.1149 bits (209), Expect = 1.233e-16 Identity = 79/260 (30.38%), Postives = 126/260 (48.46%), Query Frame = 1
Query: 1522 FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRT------TGVIVTKSKLDREIQHKYQFRAFATDKLNSA---SSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNE--KYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
F +S TGVI + R+DRE + + + +S V VDD NDN T Y +++E+ NT ATD D N T+ Y++ ++ F++ T T ++TK LDRE YQ ATD+ A ++ I + D ND+ PVF NS L SI+ + K G S+ ++ A D D + I+Y++ + + +S+F LD TG + +++LD E ++ Y+ ++ A D G P
Sbjct: 42 FGFNSNTGVISTTARIDRETTTQISLQLRTLNPSNQPIS----VQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQ-NSYLGSIAENTKP--GVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLD---FEVKNSYTFNVIASDGGVP 291 HSP 11 Score: 77.0258 bits (188), Expect = 3.482e-14 Identity = 131/509 (25.74%), Postives = 217/509 (42.63%), Query Frame = 1
Query: 202 GVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVT------LHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFIL-VQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRP-TKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYE---SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCT--TDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDRE-VKNLYQFIIVASDHGSPKL-SSTVTALVHVDDEN 1677
G+ F ++ + +L ++ +DRE TSS N +++K T L+ T +I I + D ND P + + + V E GS + D D G NG IKY++ + + V+ L K LD E Y+LTI + D G+ S + V V +LD+NDN P F T +P T + E + V + T SD D G N +FS S K++ + EI + +D E +G F V+ D S + S+ + + ++DEND P P S +V I A D D + VT + + N G+ +L P+ + +++ ++ D ++ I+ + +T T ++V P FS S+ EN AGT+ + A + S NG + Y + + F + TGV+++ +DRE + + ++ A D P +S+ T + V D N
Sbjct: 1203 GMDKFFINSSTGELHLSKTLDRET---TSSYN--LVVKATDASNANLYSTAKI---EITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPT---QPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPS--KTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSP--KLSTRKSITVQVTDENDNSPGFVSPPAAAAGS------------SLNVMTITAEDPDRNSNGKVTYSIISGNNGY---FNLHPS--TGQLQMI-HQIPDNPTIYQLTIQASDGGQPSRQTQTVVSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSS-LNGNIEYYLTSDSSKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677 HSP 12 Score: 61.6178 bits (148), Expect = 1.844e-9 Identity = 56/196 (28.57%), Postives = 87/196 (44.39%), Query Frame = 1
Query: 1702 SPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIV--AEDPDDKESARIQYSVVNEKYSSLFSLD------KDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRM 2265
S Y F V+E PP T VG+V D + F +F + TGVI T +++DRE + + + N S V + V+D+NDN P F +L +E+ + T + A DPD + + Y++ + ++ FSL T + ++ LD E D Y L+I A D GTP +
Sbjct: 10 SSYTFHVQEEQPPGTYVGKV-----DGASAFE-----GSPKQFGFNSNTGVISTTARIDRETTTQISLQLRTLNPSNQPIS-VQVQVDDINDNEPRFPTL-----YYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLD---RETTDFYQLNITATDRGTPAL 186
BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO40470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S751]) HSP 1 Score: 211.46 bits (537), Expect = 1.291e-55 Identity = 196/660 (29.70%), Postives = 320/660 (48.48%), Query Frame = 1
Query: 349 IRIEIDDVNDHSP---NWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAI-IDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHK---TSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI--PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTAL-VHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSA------SSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCT 2271
+ +++ DVND+SP NW H + E S ++ D D G+NG+I Y +S DT +G + +LDRE Y L +I+ D G P +S +V+V + D+NDN P F + + + E PV + + ++ SD+D G NG ++ F +T +A+ + + K G+I + LD E+ + F ++ D S R +++V +I+ D ND P+ S+ +++ ++E+ P+ +S+ + A+D D ++ T ++ SL L LDRE+ R + ++ +D ++ T T I +++ DVNDN P F + ++ E + G+ V A+D D G NG V Y I D F I+ TGVI + LD EV N Y + A+D G + ++ + ++V+D NDN + +P + EN P NT V + A D D N I+Y++D S F I+ TG+I T +DRE +Y + ATD+ + ++ + I ++D+NDN P F S N + E F +T I A DPD + ++Y +V+ + FSLD TG L L SLD ED Y+L I A D+G+P + +
Sbjct: 898 LELKVVDVNDYSPVFGNWSYTAHVL---ETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASY--AFFVKENEPVATYLGAVSASDSDEGSNGHVTYRF---DTQVAQ-FIVDKQTGKITTSQVLDREAK-ASYVFSIVATDGGS--SPRVDKTQVTVIVRDVNDCSPKF--------SKNKYSVTVNEDLPVGSSLLTLIATDDD-QQGPNSDITYMIVAGPKAFSLNQVTG----VLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVV-AAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKF----VSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPD-TGKFSLDLKTGVLKLIGSLD---YEDVPQYTLHISATDLGSPPLTS 1523 HSP 2 Score: 205.297 bits (521), Expect = 1.108e-53 Identity = 200/666 (30.03%), Postives = 321/666 (48.20%), Query Frame = 1
Query: 346 TIRIEIDDVNDHSPNW-KINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESST--DTFILVQEHG----LYLQTLKQ-----LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTET-SIAKSYFLVKPDGEIIVLR-QLDYESGIHKFDFKVIIK--DHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVN--HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP------AHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN-SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAA--GFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
T+ + + D+ND+SP++ + K++ E + +K I + D DFG N YT+ S + F L+ + LY + +DRE Y L I ++D G P+ G L + + + D NDN P FS + T IPE + V + +L+++ SD D G N E +S ET S ++ F + P +IV +LDYE+ K + +++K D S ++ SS + V I + D ND P I + + G + EN + T VA + SD D ++ V T + S+ ND E + + LDRE F++ +C D + T + +++GDVND +PKF + + EN T V A+D+D G N +VY+I ++ F ID +G+I + LDRE ++ D GSP LS + +V++ D NDN S Y + ENSP +PV +++A D D N I YS+ ++ + F +D G++ LD E+Q Y F+ ATD S ++ V + + D+NDN PVF +S S+ Y E G S+ ++ A D D + A ++ + +FS+D +G + L + LD E +D+Y L ++A D G
Sbjct: 43 TVLVYVQDLNDNSPSFVRGTSAKLVVFENDKDFRQKLIAV--DSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGT--IPENIDVGTSILQVSASDKDIGTNAEIQYS---IETHSDPQAIFGIHPTTGVIVNNVRLDYEA---KRSYLIVVKAEDKGS-SHQLSSSAIVRIEVLDVNDNNPVIHV----SYTLGGSYQVTENATIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLND--ESIIAVGQSLDRETHDHFFLKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLV-AIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSI--LTPNTPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSLTDLNDNQPVFDP-----SSYSVEYFENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDG-SGLITLAKLLD---RETQDNYLLTVKAVDGG 679 HSP 3 Score: 194.512 bits (493), Expect = 2.609e-50 Identity = 186/668 (27.84%), Postives = 314/668 (47.01%), Query Frame = 1
Query: 349 IRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL-ESSTDTFILVQEHG-LYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTS--IFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHG-SPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSG--KFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVE----DVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGD 2313
+ I + DVND P + ++ E A S + D G N ++ Y++ + +TD +L+ G LYLQ+ ++D E LT+ + D+G P G V + ++DINDN+P+F++S + R +PE P+ ++ DAD+G G SFS ++ + L G + + + +DY + + V +D S RSS + +E+ + D ND P + A + E P +++ + A+D D E+ ++ + F + + N K+ LDRE + +++I D + +S ++ V + DVNDN+P F +KEN T V A D D G NG V Y F +D +TG I + LDRE K Y F IVA+D G SP++ T ++ V D ND + Y V E+ P + + +IATD D Q + Y+ +G F++++ TGV+ S LDRE+ H++ A+DK + S + ++E DVNDN PVF + ++ ++ K G + ++A D D ++ +++Y +VN F +++ TG + R+LD E + Y L + A DMG + T+++ I ++ D
Sbjct: 689 VNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQS--EVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVR----LPEDTPIGHTFYTVSVFDADSGVLGRVSFSLLSNPGTL---FNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSP--PRSSTAMLELKVVDVNDYSPVFGNWSYT-------AHVLETTPPDSNIIEVVATDVDSGENGRIS-----YAFDSKVDTSKFGLRNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPVATYLGA-VSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREAKASYVFSIVATDGGSSPRVDKTQVTVI-VRDVNDCSPKFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAGPKAFSLNQVTGVLTLVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVNDNYPVF-INETTFKTV--PEKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALD---FEVTNRYVLRVSATDMGKKQQKTSYQLVTIYVEDAND 1325 HSP 4 Score: 170.244 bits (430), Expect = 8.529e-43 Identity = 186/681 (27.31%), Postives = 312/681 (45.81%), Query Frame = 1
Query: 337 RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDT--FILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRL----EVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHK---TSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAH--DIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDS-GKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNS---ASSIVMIFVEDVNDNPPVFK--------MPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKES--ARIQYSVVNEKYS-SLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKI 2292
++VTI +E D ND+ P + N E + + + D D G N +I YT++S + F + E GL +QT +DRE S Y L + +TD+ ++ RL +++ I D+NDN P+F + R + E P V +T D D GQ G + +T + L G + ++ LDYE + ++ + D S N + P + + ENKP TSV + A D+D + +T + + + S+ D + +VT +LDRE + F+ + T V++ +ST++ +++ D NDN PKF ++ + + EN A V+ D D G N V+YSI + D FTI TG + + +LDRE K YQ + A D P ++ + ++D+NDNP + + S Y + E +PP T + + A+DKD N I Y+L +D+ G ++ID TG++ + ++ + I+ +Y F A D+ A V I +ED N++ P F PN+S +++ +T + A D D +S ++ Y + + K S SLF ++ +TG + R+ G + ++L I A D G+P + RG+ I
Sbjct: 1314 QLVTIYVE--DANDNRPTFDKNPIITWIYENVPINTNVTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGL-IQTTHPIDREEISEYSLKVRATDQAF-TEQDRLYNTATLKIIIQDLNDNAPKF---VSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIVSPDTG---KFSLDLKTGVLKLIGSLDYED-VPQYTLHISATDLGS---------PPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSI----DKHSGLIVTNSILDREKKDTYFLTVHAT-GVSYPFRVSSTSVRINVMDRNDNPPKFISPVVTLKVPENSPARLIYTLTVQ--DLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLS--NDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASAL-----------VTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSV---RTSAGFSNPPQGRHALYIIAEDHGSPPL----RGYGI 1947 HSP 5 Score: 159.844 bits (403), Expect = 1.517e-39 Identity = 199/752 (26.46%), Postives = 331/752 (44.02%), Query Frame = 1
Query: 79 HIY--RIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKG--VQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLH--GTDRI---VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHK--TSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAH-DIPFTIDSRTGVIRSKDRLD-REVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK---LNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG-TPRMCTT 2274
H Y R+ E + ++ +N F S Y I N + + F +DP S ++ +DRE I ++L V +H G+ + ++ + + D ND+ P + + + E +GS ++ DPD G+N I Y++ + F L GL + + LD E +S Y + +TD G +S V V + D+NDN P F S + E + + +L D D+ + F+ + E A F V G I + + LD E+ + ++ + +K G + +++ V I + D NDE P+ + +E F I + ++ LS + + A +D K ++ + + G +++ L N+ L +D E +++ + D N+T+ + D+NDNSP+F+ + I + + E+ G T V D DSG G V +S+ ++ F +DS TG + +D Y + A D GSP SST + V D ND + Y V E +PP++ + V+ATD D N I Y+ D D+ KF + R G I KSKLDRE +Y + A D S+S+ V + V+DVNDN P F+ + + + E L + A D D+ + + Y + + F +DK TG + + LD E + Y I A D G +PR+ T
Sbjct: 392 HTYETRVWENATVNTLVAIVNAVDQDFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQ-------VVLTVLVHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTPFFLDPRKGLVTNS-RTLDHEVQSSYTFQVAATDGG--GRSCNATVHVSLTDLNDNQPVFDPSSYSVEYF--ENTRIGQSICQLKAIDRDSPK---FAITRFIIEQGNADEVFSVDGSGLITLAKLLDRET---QDNYLLTVKAVDGGGQDSVNKAIVNITVLDVNDE------PPIFSKAEYNFTIQEHSQALSV-IGHVHAISRD-KGTNAEVVYSISKGNTDNIVLI----NSTGTLYLQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTF-YTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGL-RNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAF---FVKENEPVATYLGAVSASDSDEGSNGHVTYRF--DTQVAQFIVDKQTGKITTSQVLD---REAKASYVFSIVATDGGSSPRVDKT 1103 HSP 6 Score: 128.642 bits (322), Expect = 6.128e-30 Identity = 163/595 (27.39%), Postives = 267/595 (44.87%), Query Frame = 1
Query: 577 LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQ-SVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPM-----RTNSETGFAII-----DENKPLSTSVALIQASDKD---FKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL------VTARMLDREMEKRI---FIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSG-KNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCT 2271
LD E ++L +++T +G S +G + +++ ++D NDN+P F S ++ +T + V+K+T +D D+G NG+ ++S A + + GEI + LD E+ F ++I+ S +S+ +V+++++D ND P F P+ R ++ TG + D +K + L AS + S T + N S +T +D ++K+ ++AR R ++ RI FI+I V + + PKF + EN GT+ V+ D +G G + Y+I + F I R+GVI LD E K + ++ A D +P V ++V D ND + S Y + E P T V V A DKD N +++++ D G F IDR TGVI T+ LD E + ATD+ + V I V D+NDNPPVF++P N + + L +I A D D +AR+ ++V+ LF +DK +G+L + D + YSL I+A D G P + +
Sbjct: 2025 LDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNML-AQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNE--AGVFTIDSTTGEITTAKLLDRET---TASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPL--FDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPIT-NSDQIDYKIDADTGVISAR---RTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIITREPKFELPSYFGKVPENAMMGTSV-LTVRVTDNAAGLPLGRISYNIENSNY-FRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGP--NDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVY-QYSLTIKATDAGNPPLSS 2602 HSP 7 Score: 120.553 bits (301), Expect = 2.047e-27 Identity = 155/620 (25.00%), Postives = 259/620 (41.77%), Query Frame = 1
Query: 463 SFDPDFGDNGQIKYTLESST--DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTS-TNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGK--NGFVVYSIPAHDIP---FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSS-TVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKS--KLDREIQHKYQFRAFATDKLNSASSIVMIF---VEDVNDNPPVFKMPNSSLNSISLSYKEAAGFS---LTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCT 2271
++D D G N ++ Y++ S D F + + GL + T LDRE K Y LT+ +T P + V + ++D NDN P+F + + T +PE P + ++ LT D D G N + +S T A + + + GE+ +LD E+ + V KD Y + + I ++N Q Y + I E P TS+ + ASDKD + + T N ++ + + AR ++ F I + K + + + I D N+++P+F+ + I N A V A D D+ K NG V Y + F ++S TG +R+ + + I+A DHGSP L + +V + ++D P + +P + ENS + + V A + + YS+ + F +D TGVI S LD E ++ AT + + + MI V D NDN P F P++ L ++ ++ F + K+ A D D + ++ YS+ + +F++D TG + + LD E + L I D G P T
Sbjct: 1565 AYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGLIV-TNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRNDNPPKFISPVV--TLKVPENSPAR-LIYTLTVQDLDYGNNTKVLYSIMSGNTDGA--FTIGRSTGELSTTTKLDRETK-ASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYS---------STISELTPPGTSILNLTASDKDSGSNGNIVYTLSN----DTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYEVHIFPNTSASALVT-MVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNIQDDPPRFLNQTPARVSIPENSKVGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFH-PSNMLAQLA---EDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLD---RETTASFDLVIRGTDSGIPPKST 2156 HSP 8 Score: 105.916 bits (263), Expect = 6.281e-23 Identity = 179/750 (23.87%), Postives = 299/750 (39.87%), Query Frame = 1
Query: 175 YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILK-VTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHAS---LGYXXXXXXXXXXXXXXXNDEYPQ-IKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIG--DVNDNSPKFSDNIIHMSIKENMDAGTTTNK---QVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIE---------------------------TSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYV-SDSGKFNIDRTTGVIVTKSKLDREIQHKY-QFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMP--------NSSLNSISLSYK---EAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
Y I++ G F + + +LS ++DRE +S + K +T I I I+D ND+ P ++ + + +E G+ + D D G NG I YTL + T + + + + + K Y I+ D+G K + V ++I D N++ P+F+ + + I P T ++V +T +DAD ++ ++ ++ + S F+V+ + + + +I +DH S GY I D+ P+ + P R + I EN + + + ++A + T + + N G A + P + +A LD E K + ++ T + + +DI D NDNSP F + + + E D G + +V A D DSG NG V YSI + FTIDS TG I + LDRE + +I +D G P S+ V V D NDNP + + S + +K S P + RV ATD+D N I YS SD + ID TGVI + +D I+ + Q A D+ +++V + P F++P N+ + + L+ + AAG L RI Y++ N Y F + + +G + + + LD E + + L + A D P
Sbjct: 1682 YSIMSGNTDGA--FTIGRSTGELSTTTKLDRET---KASYQLSVQAKDITPPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVPVRIKIEDKNNHAPQFTKTPYE-VHIFPNTS-ASALVTMVTATDADTDKSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGFSNPPQGRHALYIIAEDHGSPPLRGYGIVQIVIGNI-----QDDPPRFLNQTPARVS-------IPENSKVGSYITTVRARASSDAQV-TYSIISGNKGRA--FYVDPFT--GVISVASADALDYESTKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAFHPSNMLAQLAE--DTGAFKPRFVVKVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLNDNPPLFDPLSEVNIREDTRTGAVVTSVVATDTDKESRLTYNLKSASTPGIAILRVSATDQDSGSNAQIKYSFPITNSDQIDYKIDADTGVISARRTIDVRIRDSFIQIPVQAMDQ-GVPPQRALVYVRIIITREPKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPL-------------GRISYNIENSNY---FRIGQRSGVISVNKPLD---YETKRRFLLVVSAIDDTAP 2385 HSP 9 Score: 102.449 bits (254), Expect = 5.638e-22 Identity = 89/317 (28.08%), Postives = 148/317 (46.69%), Query Frame = 1
Query: 1261 LDREMEKRIFIRIICTDSVNHKTSTNITV--DIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHD--IPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIET-SPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAF--ATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFL 2172
LD E ++R + + D + V ++ DVND P F + E + GT V A DKDSG NG V ++I + D F ID +TGVIR++ LD E + + A+D GSP + + V+ + V D NDNP + P + +V EN P N+ + + ATD+D N + +++ + G F ID+ +G + T D E YQ+ ATD N S++ +++ V D ++ P F + + + G + ++ A D D + R+ + N ++L ++ TG +
Sbjct: 2365 LDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIV-VNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFD---VPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNAL-KMNATTGII 2676 HSP 10 Score: 80.1073 bits (196), Expect = 4.656e-15 Identity = 127/479 (26.51%), Postives = 209/479 (43.63%), Query Frame = 1
Query: 469 DPDFGDNGQIKYTL---ESSTDTFILVQEHGLYLQTLKQLD-REHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLV-KPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGF-AIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFS-DNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNG---FVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQF--IIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD--NQTIFYSLDYVSDSGKFNIDRTTGVI 1857
D D G N QIKY+ S + + + G+ + + +D R S ++ + + D+G+P + + V + I P+F + +PE + + VL + +D AG E S +YF + + G I V + LDYE+ K F +++ + V I +SD NDE P ++G+ A E P+ T V + A+DKD + V + S ++ D + T R LD E K + + TD S T ++T+ + D+NDN P F + + EN+ + ++ A D+DSG N F V + F ID +G + + D E +YQ+ I A+D G+P LSS +T +V+V DE++ Y+F V N+ VG+V ATD+D +Q + + Y S ++ TTG+I
Sbjct: 2227 DQDSGSNAQIKYSFPITNSDQIDYKIDADTGV-ISARRTIDVRIRDSFIQIPVQAMDQGVPPQRALVYVRIIIT----REPKFELPSYFGK--VPENAMMGTSVLTVRVTDNAAGL--PLGRISYNIENS---NYFRIGQRSGVISVNKPLDYET---KRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVF--------GQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAI----DRKTGVIRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLNSRL-YEINATDRDSGANARLSFTVIGGTGQGL-FLIDKFSGWLTTNITFDYENTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVFYNPTSNALKMNATTGII 2676 HSP 11 Score: 66.6254 bits (161), Expect = 5.469e-11 Identity = 42/159 (26.42%), Postives = 83/159 (52.20%), Query Frame = 1
Query: 343 VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTD--TFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGE 813
V + I + DVND P + + + ++EG G+ + D D G NG++ + ++S D +F + ++ G+ ++T + LD E + +++ +TD G P + V + +LD+NDN P F +++ E +P+ S + ++ +D D+G N
Sbjct: 2391 VPVYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGV-IRTQRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVL-ENLPLNSRLYEINATDRDSGANAR 2547 HSP 12 Score: 56.6102 bits (135), Expect = 5.701e-8 Identity = 82/281 (29.18%), Postives = 125/281 (44.48%), Query Frame = 1
Query: 1516 IPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDN-PVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNI--------DRTTGVIVTKSKL--DREIQHKYQFRAFATDKLNSASSIVM---IFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYS---SLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINI 2298
IP ++ GVI +K LDRE + Y IV + +P S TV LV+V D NDN P + + + V EN ++IA D D N T Y++ + F + D ++V S + DRE Y A+D N A+ + I VED NDN P F N S S ++ G S+ ++ A D D +A IQYS+ E +S ++F + TG + LD E + Y + ++A D G+ ++ +I +
Sbjct: 3 IPADLEYNAGVITTKTVLDREKVSAYNLTIV--EFSTPPKSYTV--LVYVQDLNDNSPSFVRGTSAKLVVFENDKDFRQ--KLIAVDSDFGSNSTQSYTIVSGNVGNVFKLISKRDTDGDLYADLVVNASSIGVDRERLDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFS--NVSY-SGTIPENIDVGTSILQVSASDKDIGTNAEIQYSI--ETHSDPQAIFGIHPTTGVIVNNVRLD---YEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEV 269
BLAST of Protocadherin 1 vs. Ensembl Nematostella
Match: EDO30364 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T100]) HSP 1 Score: 207.994 bits (528), Expect = 1.196e-54 Identity = 202/726 (27.82%), Postives = 344/726 (47.38%), Query Frame = 1
Query: 163 DSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL-ESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDY-ESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAI-IDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD----SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQT----IFYSLDYVSDSGKFNIDRTTGVIVTKSK----LDREIQHKYQFRAFATDKLN--SASSIV--MIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
D+ Y I N G+ F +D ++ ++ +DRE + + F+ K +++ ++ + ++++DVND+ P + + + + + E G+ + D D GDN + Y++ E+ TD + G+ QLDRE + + TI +TD G+PSKS V ++++DINDN+P F+ + + + E P + VL +T SD D G N + S+ + + + F + PD G I L+ E+G + + + S R +RV I ++D ND PQ +++G+A + E+ + +V + +D+D ++ V + + + SL + + + T LDRE + I D ++ TS IT++ DVNDN P FS ++ +++++E++ T QV A D D G NG Y I A D F ID+ TG+I K +LD E +LY + A D G+P L+ +HV D +DN + Y ++ EN V V ATD D + ++Y ++ + F I +GVI L+RE +Y+ + A ++N S+V +I V DVNDN P F S + S+ ++ + A+D D+ ES I +++V+ + +F +D TG L R LD ED YSL + A D G P + ++
Sbjct: 1223 DTISYSIANGDPYGL--FTIDNVTGEIRTVAELDRENV---TQYELFVQAKDSVNLVSDLLKVVVQVEDVNDNPPVFSMPGYTIEYWEESPEGTSILQVKAIDADIGDNAAVLYSIVENVTDYVTVNAITGVISLGSSQLDREVEEYFNFTIRATDSGVPSKSSTASVAIKLVDINDNSPVFNNTDYY--AYVRENQPAGTPVLVVTASDKDVGTNAKLSYVL----SGVLYTRFAIDPDTGNITTREPLNREETGSYTLTLRAV----DSAIRAREGTTRVIITVTDANDHVPQF--------TQSGYAFSVREDVKVGHTVGRVATTDEDINDNARVRY----YISSGNTSLMFSVNETTGIISTTSTLDREQNASYTLIITAKDHGIPALESNTSVMITIE--DVNDNKPLFSKSVYNVTLRESVFLKTQV-VQVIATDPDEGANGQFTYKITAGDTDDVFYIDANTGLITIKAKLDYEKTSLYNLTVSAQDLGTPPLTGACFVEIHVSDVDDNAPVFHKPRYSAELYENVTRGHHVITVNATDIDAEASHKRVYYRIESGNTDSMFLIGEQSGVITLNCTPSGCLNRETHARYELQVAAISRVNLTEQKSLVPAVITVLDVNDNAPRFD-SESYVRSVLEDTGPITDATILTVKAQDGDEGESGEIIFTIVSGNENGVFQMDNKTGVLTRTRPLD---REDTSFYSLVVMAEDKGEPALSSS 1914 HSP 2 Score: 161.384 bits (407), Expect = 4.463e-40 Identity = 163/595 (27.39%), Postives = 273/595 (45.88%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICP-TSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFIL-VQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNN-EFKLVTARMLDREMEKRIFIRIICTDSVN---HKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQ---VKAIDKDSGKNGFVVYSIPA--HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYE---------FKVKENSPPNTPVGRVIATDKDNQT-IFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQH-KYQFRAFATDKLN 1932
F +DP + ++ ++RE T ++ GT R++ I + D NDH P + + + E G + D D DN +++Y + S + + V E + T LDRE + Y L I + D GIP+ V + I D+NDN P FS S++ T + E++ +++ V+++ +D D G NG+F++ + +T +++ G I + +LDYE ++ V +D LG + + I + D+ + F+ R ++E + EN V + A+D D + S G +S+ L + L+RE R +++ VN K+ + + DVNDN+P+F S+ E D G T+ VKA D D G++G ++++I + + F +D++TGV+ LDRE + Y +++A D G P LSS+VT + V D NDN I++T P + F VKEN PVG V A D D + I+Y + + F ++ T+G + T+ LDRE Y + + DKLN
Sbjct: 1446 FAIDPDTGNITTREPLNREETGSYTLTLRAVDSAIRAREGTTRVI---ITVTDANDHVPQFTQSGYAFSVREDVKVGHTVGRVATTDEDINDNARVRYYISSGNTSLMFSVNETTGIISTTSTLDREQNASYTLIITAKDHGIPALESNTSVMITIEDVNDNKPLFSKSVYNVT--LRESVFLKTQVVQVIATDPDEGANGQFTYKITAGDTD--DVFYIDANTGLITIKAKLDYEK-TSLYNLTVSAQD---LGTPPLTGACFVEIHVSDVDDNAPV-FHKPRYSAE-----LYENVTRGHHVITVNATDIDAEASHKRVYYRIESGNTDSMFLIGEQSGVITLNCTPSGCLNRETHARYELQVAAISRVNLTEQKSLVPAVITVLDVNDNAPRFDSESYVRSVLE--DTGPITDATILTVKAQDGDEGESGEIIFTIVSGNENGVFQMDNKTGVLTRTRPLDREDTSFYSLVVMAEDKGEPALSSSVTVNITVLDMNDNLPILQT-PMDVLIPERRTTFSVKENLDAGVPVGVVAAQDLDTKNLIYYYITNTEEQKYFILNETSGELRTRITLDREDSSVHYLYVKASNDKLN 2020 HSP 3 Score: 160.999 bits (406), Expect = 6.290e-40 Identity = 196/707 (27.72%), Postives = 314/707 (44.41%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINC-----FII-LKVTLHGT---DR---IVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGF-AIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTP-TNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI--VMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAA--GFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRS-LDGAHAEDRDHYSLDIEACDMGTPRMCTT 2274
F LDP++ +LSV +DRE+ P S N F++ + T T DR V + I + D ND+SP ++ ++ +E GS + D D G++ Y + + +++L R + K ++ + + R V + + D+NDN P F+ S + + E P + VL++ SD D G NG+ ++ T + ++ + GEI V +D E+ +H F V +D R + + V I + DEND +PQ F TG+ I EN P+ +++ ++ D K S S +L P ++ L+TAR EKR I ND SP F ++ ++++ E+ G + V A D+D G N + YS + F + TG I LDRE KN+Y + A++ + +T + V D D+ +S K+ EN+ T V ++ A DKD TI YS+ G F ID TG I T ++LDRE +Y+ A D +N S + V++ VEDVNDNPPVF MP ++ Y E + G S+ ++ A D D ++A + YS+V E + +++ TG + L S LD E ++++ I A D G P +T
Sbjct: 758 FRLDPVTGELSVRKELDRES--PQMSRNAQGDGRFLLDITATDQATPISDRKSATVRVSITVRDTNDNSPQFQSQNYETRLSEAARPGSNVIQVSATDQDLEYKGKVIYNITDGDENRKC---------EVEKLVRHYNWHKKNCVLCKESKCSVE--RTYVVIYVDDVNDNDPVFNQSKYAAD--VLENSPTGTPVLRVHASDRDQGANGKITYKL--TNGNKDDAFSINNVTGEITVAGVIDREA-VHTFVLTVQAEDQGEPS-SRKTFAEVVITVKDENDNFPQFSF--------TGYEGEIAENSPVGSTITMV----PDQKIS--------------SSTLRPRSSPRAPAALLTAR------EKRPITLI---------------------NDESPLFEKSMYYVNVSESASRGIVIGR-VTATDRDEGINAIIFYSSNGAEAKFYVSRSTGDIIVDSPLDREFKNVYILNVTAANIVAGAQDTTTQVHITVTDVIDDKPYFNSSSLTVKLSENASIGTNVTKITALDKDIGDTISYSIANGDPYGLFTIDNVTGEIRTVAELDRENVTQYELFVQAKDSVNLVSDLLKVVVQVEDVNDNPPVFSMP-----GYTIEYWEESPEGTSILQVKAIDADIGDNAAVLYSIV-ENVTDYVTVNAITGVISLGSSQLD---REVEEYFNFTIRATDSGVPSKSST 1382 HSP 4 Score: 152.91 bits (385), Expect = 1.722e-37 Identity = 209/765 (27.32%), Postives = 318/765 (41.57%), Query Frame = 1
Query: 232 SSKLSVNNRIDREAICPTSSINCFIILKVTLHGTD---RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISF---DPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFR--PTKII-----PETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYES--------GIHKFDFKVIIKDHAS-LGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP--AHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALV-HVDDENDNPVIIETSPYEFKVKENSP-----------------------PNTPVGRVIATDK-------DNQTIF-YSLDYVS-------------------DSG--------------KFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSA---SSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACD 2247
S ++ +DRE I + + + HG + V + + + D ND++P + + N E AG + S DPD G NGQ+ Y++ F L G + LDRE K Y L I TD G P + V V ILD+NDNTP F + + T +I P T + ++ + +D DA NG+ ++S S E +F + P GE+ V ++LD ES G +F + D A+ + +S+ RV I + D ND PQ + N ET + + +P S +V + A+D+D + V + D +E + L R ++C +S T + + + DVNDN P F+ + + EN GT +V A D+D G NG + Y + D F+I++ TG I +DRE + + + A D G P T +V V DENDN + YE ++ ENSP P P + A +K D +F S+ YV+ D G KF + R+TG I+ S LDRE ++ Y A + + A ++ V I V DV D+ P F NSS ++ LS + G ++TKI A D D ++ I YS+ N LF++D TG + LD E+ Y L ++A D
Sbjct: 547 SGLVTTARELDRETIATYT-----LTVSAYDHGVSSRHKHVQLTVNVLDENDNTPQIT-DGLTITTNISEGAGGGTVLLSSIAAVDPDAGSNGQLTYSMSGGDSRFTLNSATGRLQISPTGLDRELKDSYDLIINVTDNGSPPNTNSTTVHVTILDVNDNTPAFDPNPAQSLATYVITVDEGPGT--INKTLIDINATDPDADANGKVAYSLSGDE----HGFFRLDPVTGELSVRKELDRESPQMSRNAQGDGRFLLDITATDQATPISDRKSATVRVSITVRDTNDNSPQFQ----SQNYETRLS--EAARPGS-NVIQVSATDQDLEYKGKV--------------IYNITDGDENRKCEVEKLVRHYNWHKKNCVLCKESKCSVERTYVVIYVDDVNDNDPVFNQSKYAADVLENSPTGTPV-LRVHASDRDQGANGKITYKLTNGNKDDAFSINNVTGEITVAGVIDREAVHTFVLTVQAEDQGEPSSRKTFAEVVITVKDENDNFPQFSFTGYEGEIAENSPVGSTITMVPDQKISSSTLRPRSSPRAPAALLTAREKRPITLINDESPLFEKSMYYVNVSESASRGIVIGRVTATDRDEGINAIIFYSSNGAEAKFYVSRSTGDIIVDSPLDREFKNVYILNVTAANIVAGAQDTTTQVHITVTDVIDDKPYF---NSSSLTVKLSENASIGTNVTKITALDKDIGDT--ISYSIANGDPYGLFTIDNVTGEIRTVAELD---RENVTQYELFVQAKD 1269 HSP 5 Score: 147.132 bits (370), Expect = 1.090e-35 Identity = 163/541 (30.13%), Postives = 251/541 (46.40%), Query Frame = 1
Query: 682 INDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFK-VIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDN---FGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTST-NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPF-TIDSRTGVIR-SKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD---KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRM 2265
IND +P F S++ + E+ V+ ++T +D D G N +S + E +++ + G+IIV LD E FK V I + + ++ + D ++ NS + + EN + T+V I A DKD DT++ + N +G T DN ++ T LDRE + + + DSVN + + V + DVNDN P FS + E GT+ QVKAID D G N V+YSI + + T+++ TGVI +LDREV+ + F I A+D G P SST + + + D NDN + + Y V+EN P TPV V A+DKD N + Y L V + +F ID TG I T+ L+RE Y A D + ++ V+I V D ND+ P F S + S+ G ++ ++ D D ++AR++Y + + S +FS+++ TG + +LD E Y+L I A D G P +
Sbjct: 1082 INDESPLFEKSMYYVN--VSESASRGIVIGRVTATDRDEGINAIIFYSSNGAE----AKFYVSRSTGDIIVDSPLDRE-------FKNVYILNVTAANIVAGAQDTTTQVHITVTDVIDDKPYF----NSSSLTVKLSENASIGTNVTKITALDKDI--GDTISYSIANGDPYGLF-------TIDNVTGEIRTVAELDRENVTQYELFVQAKDSVNLVSDLLKVVVQVEDVNDNPPVFSMPGYTIEYWEESPEGTSI-LQVKAIDADIGDNAAVLYSIVENVTDYVTVNAITGVISLGSSQLDREVEEYFNFTIRATDSGVPSKSSTASVAIKLVDINDNSPVFNNTDYYAYVRENQPAGTPVLVVTASDKDVGTNAKLSYVLSGVLYT-RFAIDPDTGNITTREPLNREETGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHVPQFTQ---SGYAFSVREDVKVGHTVGRVATTDEDINDNARVRYYISSGNTSLMFSVNETTGIISTTSTLD---REQNASYTLIITAKDHGIPAL 1588 HSP 6 Score: 145.976 bits (367), Expect = 2.605e-35 Identity = 154/550 (28.00%), Postives = 255/550 (46.36%), Query Frame = 1
Query: 598 GYKLTIISTDRGIPSK-SGRLEVEVEILDINDNTPRFSTSIFRPT---KIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKL------VTARMLDREMEKRIFIRIICTD---SVNHKTSTNITVDIGDVNDNSPKFSDNI-IHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIR-SKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYE----FKVKENSPPNTPVGRVI---ATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQH---------KYQFRAFATDKLN------SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVN 2124
G + +++T+ K S V + ++++NDN P F+ S + T +I P T + +T +DAD G G ++ + +YF V D G I + LDY++ + ++ F +++KD Y+ + + V + + D ND P+ P ++ I EN P T V + A+DKD E+ + S +++ +D F + TAR LDRE + + D S HK +TV++ D NDN+P+ +D + I +I E GT + A+D D+G NG + YS+ D FT++S TG ++ S LDRE+K+ Y II +D+GSP +++ T V + D NDN + +P + + + + P T +I ATD D N + YSL + G F +D TG + + +LDRE ++ ATD+ SA+ V I V D NDN P F+ N LS G ++ ++ A D D + ++ Y++ +
Sbjct: 353 GEEKKVVATETDTSEKFSANASVTLTLINVNDNKPMFAKSSYNYTMDEEITPGTH-----IADITATDADLGTFGALTYELRGGQ----AAYFSVNADNGTISAAQILDYDT-LRQYQFSLVVKDGGGF-YQEIAIATVTVTLQDVNDNDPEFTGMPYTSD-------IAENLPAGTIVFQVTATDKDSGENGRL-----------SFNISAGDDGGHFSINGSGLVTTARELDRETIATYTLTVSAYDHGVSSRHK-HVQLTVNVLDENDNTPQITDGLTITTNISEGAGGGTVLLSSIAAVDPDAGSNGQLTYSMSGGDSRFTLNSATGRLQISPTGLDRELKDSYDLIINVTDNGSPPNTNSTTVHVTILDVNDNTPAFDPNPAQSLATYVITVDEGPGTINKTLIDINATDPDADANGKVAYSLSG-DEHGFFRLDPVTGELSVRKELDRESPQMSRNAQGDGRFLLDITATDQATPISDRKSATVRVSITVRDTNDNSPQFQSQNYETR---LSEAARPGSNVIQVSATDQDLEYKGKVIYNITD 868 HSP 7 Score: 127.487 bits (319), Expect = 1.135e-29 Identity = 186/751 (24.77%), Postives = 320/751 (42.61%), Query Frame = 1
Query: 214 FILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESS-TDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIF---------RPTKIIPETMPV---------QSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKP-DGEIIVLRQLDYESGIH-KFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKF--------------YPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTS---TNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDN-PVIIETSPYEFKVKENSPPNTPV-GRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVI-VTKSKLDREIQHKYQFRAFATDKL---NSASSIVMIFVEDVNDNPPVFK-MPNSSLNSISLSYKEAAGF---SLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLD------GAHAEDRDHYSLDIEACDMGTP---RMCTTFR 2280
F L+ ++ +L++ +D E S + I + + + T+ IE+ D++D P + + + E GS + D D G N I Y + S +D + + + +D E +++T+ +++ P+ + + V V ++D+NDN P F S++ P +++ + + V + V+ L G+D+D F + P G + + + LDYE I+ FD++ G++ + + +++ E D + PM S + + +E P T +A I A+D D T T ++ + DN + A++LD + ++ ++ D +TV + DVNDN P+F+ I EN+ AGT QV A DKDSG+NG + ++I A D F+I+ +G++ + LDRE Y + A DHG V V+V DENDN P I + + E + T + + A D D N + YS+ +F ++ TG + ++ + LDRE++ Y TD N+ S+ V + + DVNDN P F P SL + ++ E G +L I A DPD + ++ YS+ +++ F LD TG L +++ LD +A+ + LDI A D TP R T R
Sbjct: 96 FSLNSVNGELTLGGPLDFE--VARSYMLVVIAEDLGVPKLESRTTVIIEVTDISDMPPRFLQSFYLKEIEENTPIGSTVVTVEARDGDVGINNPILYEIISGNSDGVFTIDSNTGVITVNGSIDAEKTDVFRITVKASEVPDPNSNTTVTVVVTVVDVNDNRPAFLQSVYIFDVREDVALPGRVVSDQLQVTDGDKNPVFRRVLYHLVGADSDK---------------------FAIDPTSGTLYINKTLDYEKQINFTFDWERGCGSGGGSGWDWTGRGEEKKVVATETDTSEKFSANASVTLTLINVNDNKPMFAKSSYNYTMDEEITP-GTHIADITATDADLG---TFGALTYELRGGQAAYFSVNADNG--TISAAQILDYDTLRQYQFSLVVKDGGGFYQEIAIATVTVTLQDVNDNDPEFTGMPYTSDIAENLPAGTIV-FQVTATDKDSGENGRLSFNISAGDDGGHFSING-SGLVTTARELDRETIATYTLTVSAYDHGVSSRHKHVQLTVNVLDENDNTPQITDGLTITTNISEGAGGGTVLLSSIAAVDPDAGSNGQLTYSMS--GGDSRFTLNSATGRLQISPTGLDRELKDSYDLIINVTDNGSPPNTNSTTVHVTILDVNDNTPAFDPNPAQSLATYVITVDEGPGTINKTLIDINATDPDADANGKVAYSLSGDEH-GFFRLDPVTGELSVRKELDRESPQMSRNAQGDGRFLLDITATDQATPISDRKSATVR 812 HSP 8 Score: 89.7373 bits (221), Expect = 5.229e-18 Identity = 67/185 (36.22%), Postives = 90/185 (48.65%), Query Frame = 1
Query: 1351 IGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIP---AHDIPF-TIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD---NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDRE 1884
+ D NDN+P F++ I EN GTT K + AID DSG N V Y A PF +++S G + LD EV Y +++A D G PKL S T ++ V D +D P S Y +++EN+P + V V A D D N I Y + + G F ID TGVI +D E
Sbjct: 36 VDDYNDNAPVFTEQPYMAKIAENARVGTTILK-ISAIDADSGTNSQVQYKFSNATATQTPFFSLNSVNGELTLGGPLDFEVARSYMLVVIAEDLGVPKLESRTTVIIEVTDISDMPPRFLQSFYLKEIEENTPIGSTVVTVEARDGDVGINNPILYEIISGNSDGVFTIDSNTGVITVNGSIDAE 219 HSP 9 Score: 75.0998 bits (183), Expect = 1.383e-13 Identity = 139/564 (24.65%), Postives = 233/564 (41.31%), Query Frame = 1
Query: 679 DINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEK--RIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMD-AGTTTNKQVKAIDKDSGKNGF---VVYSIPAHDI-PFTIDSRTGVIRSKDRLDREVKNLYQF------------------------IIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGK---FNIDRTTGVIVTKSKLDREIQHKYQFRAFATDK----LNSASSIVMIFVEDVNDNPPVFK-MPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMG 2253
D NDN P F+ + I E V + +LK++ DAD+G N + + FS + + L +GE+ + LD+E + VI +D LG + II E I P R I+EN P+ ++V ++A D D ++ + + G ++ + T D+N + +D E RI ++ N T+ + V + DVNDN P F ++ ++E++ G + Q++ D D KN V+Y + D F ID +G + LD E + + F ++ S K S+ + + + + NDN + S Y + + E P T + + ATD D T F +L Y G+ F+++ G I LD + +YQF D A + V + ++DVNDN P F MP +S ++ AG + ++ A D D E+ R+ +++ FS++ +G + R LD E Y+L + A D G
Sbjct: 38 DYNDNAPVFTEQPYMAK--IAENARVGTTILKISAIDADSGTNSQVQYKFSNATATQTPFFSLNSVNGELTLGGPLDFEVA-RSYMLVVIAED---LGVPKLESRTTVII------EVTDISDMPPRFLQSFYLKEIEENTPIGSTVVTVEARDGDVGINNPILYEIIS-GNSDGVF---TIDSNTGVITVNGSIDAEKTDVFRITVKASEVPDPNSNTTVTVVVTVVDVNDNRPAFLQSVYIFDVREDVALPGRVVSDQLQVTDGD--KNPVFRRVLYHLVGADSDKFAIDPTSGTLYINKTLDYEKQINFTFDWERGCGSGGGSGWDWTGRGEEKKVVATETDTSEKFSANASVTLTLINVNDNKPMFAKSSYNYTMDEEITPGTHIADITATDADLGT-FGALTYELRGGQAAYFSVNADNGTISAAQILDYDTLRQYQFSLVVKDGGGFYQEIAIATVTVTLQDVNDNDPEFTGMPYTS----DIAENLPAGTIVFQVTATDKDSGENGRLSFNISAGDDGGHFSING-SGLVTTARELD---RETIATYTLTVSAYDHG 574 HSP 10 Score: 65.855 bits (159), Expect = 8.776e-11 Identity = 46/152 (30.26%), Postives = 68/152 (44.74%), Query Frame = 1
Query: 361 IDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDT---FILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQN 807
+DD ND++P + + E G+ + D D G N Q++Y ++T T F + L LD E Y L +I+ D G+P R V +E+ DI+D PRF S + K I E P+ S V+ + D D G N
Sbjct: 36 VDDYNDNAPVFTEQPYMAKIAENARVGTTILKISAIDADSGTNSQVQYKFSNATATQTPFFSLNSVNGELTLGGPLDFEVARSYMLVVIAEDLGVPKLESRTTVIIEVTDISDMPPRFLQSFY--LKEIEENTPIGSTVVTVEARDGDVGIN 185
BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh11 (protocadherin-11 X-linked [Source:NCBI gene;Acc:101161492]) HSP 1 Score: 268.085 bits (684), Expect = 1.044e-74 Identity = 255/799 (31.91%), Postives = 374/799 (46.81%), Query Frame = 1
Query: 19 KMFILILILFPDLMLSKSPDHIYRIKEELPITHIIG-------------------------YLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF----ILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD---KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYS-------SLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTP 2259
+ F L+++L L+L K+ + Y +KEE P IG Y D+P R +TG EI + N+RIDRE +C + C+ ++V + + R+V IR I+DVND++P ++ + E +R +P +FDPD G NG Y L S F I E + Q + Q LDRE + + + I D G P KS ++V I D+NDN P F S + +PE P + V +L +DAD G N + F+FS +S K +F + +I ++Q LD E + +HK +++ AS G S + V + ++D ND P I + N G ++ EN PL+T +ALI +DKD V C TD+ L P N++F L TA LD E + I+I+ +D + TS + + I D NDN+P F I +SI EN D T K + A D DSG N ++Y++ D P F ID R+G++ RLDRE + + FI++A D+GS L S VT + V D NDN Y F V EN P VG + TD D +L ++ F ID TGVI DRE Q Y F A D S+ + V I V DVNDN PVF +P+S+ + + G +T++ A D D +A +QYS+++ LF++DK +G + LQ + GA D + L ++ D+G P
Sbjct: 6 QTFPLVVLLTCVLILCKAQERDYIVKEEQPENVRIGNLLKDLDLNLDPSIRLSSPLQFKPVYKTGDVPLVRVEANTG-EIF-------------------TTNHRIDREKLCSGVFTEKRCYYEIEVAVLPDEIFRLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQNYELVKSVTEFGLDIIETPEGDKWPQLIVQQNLDREKRDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFQDSELEVS--VPENAPTGTSVAQLHATDADWGSNAQIHFAFSNQISSSTKRHFAINSSTGLITVKQPLDREVTPVHKL---IVL---ASDGGSTPSRATVIVNVTDVNDNVPAIDTRYI-INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDH---DVPFRLKPVF-NDQFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENNDPSTQLIK-ISATDADSGSNAEIIYTL-GPDAPDGFHIDRRSGILSVGKRLDREKQERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAAITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAIDGGQPPTSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSIIITSRVSPRGLFTIDKISGNITLQEKIVGA---DLGLHRLVVKVRDLGQP 766 HSP 2 Score: 95.1301 bits (235), Expect = 2.459e-19 Identity = 130/527 (24.67%), Postives = 226/527 (42.88%), Query Frame = 1
Query: 208 QNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSP----NWKIN--KHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIK-YTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDE---YPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTT----DNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTST--NITVDIGDVNDNSPKF---SDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP---------FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVH--VDDENDNPVIIE 1698
++F ++ + ++V +DRE + ++ I+L T T+ + + DVND+ P + IN V+ +E ++ ++ D D G++ YT V L+T LD E Y + I+++DRG P + V ++I D NDN P F + + IPE + ++K++ +DAD+G N E ++ P + + + G + V ++LD E +F F VI +D+ S + + R+ + ++N +P+ FY + EN PL +V LI +D D ++ +T + DNF + N DRE + + D TS+ +T+++ DVNDN P F S N + ++ G + V AID D+G N + YSI + I FTID +G I ++++ L++ ++ D G P+ +T LVH V+D N I+
Sbjct: 298 RHFAINSSTGLITVKQPLDREV----TPVHKLIVLASDGGSTPSRATVIVNVTDVNDNVPAIDTRYIINLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLS--IPENNDPSTQLIKISATDADSGSNAEIIYTLGP---DAPDGFHIDRRSGILSVGKRLDREKQ-ERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTHPEYNFY------------VPENLPLYGTVGLITVTDADAGDNAAITLSILNGKDNFIIDPQTGVIKPN----------ITFDREQQSSYTFMVKAIDGGQPPTSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTR-VFAIDNDTGMNAELQYSIISSIIITSRVSPRGLFTIDKISGNITLQEKIVGADLGLHRLVVKVRDLGQPESLQAIT-LVHLFVNDTVSNATFIQ 790
BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh11 (protocadherin-11 X-linked [Source:NCBI gene;Acc:101161492]) HSP 1 Score: 268.47 bits (685), Expect = 1.391e-74 Identity = 269/877 (30.67%), Postives = 402/877 (45.84%), Query Frame = 1
Query: 19 KMFILILILFPDLMLSKSPDHIYRIKEELPITHIIG-------------------------YLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPT--SSINCFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTF----ILVQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQ-LDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTD--SVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIP--FTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD---KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYS-------SLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMC----------------TTFRGFKINIQRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLR 2445
+ F L+++L L+L K+ + Y +KEE P IG Y D+P R +TG EI + N+RIDRE +C + C+ ++V + + R+V IR I+DVND++P ++ + E +R +P +FDPD G NG Y L S F I E + Q + Q LDRE + + + I D G P KS ++V I D+NDN P F S + +PE P + V +L +DAD G N + F+FS +S K +F + +I ++Q LD E + +HK +++ AS G S + V + ++D ND P I + N G ++ EN PL+T +ALI +DKD V C TD+ L P N++F L TA LD E + I+I+ +D + TS + + I D NDN+P F I +SI EN D T K + A D DSG N ++Y++ D P F ID R+G++ RLDRE + + FI++A D+GS L S VT + V D NDN Y F V EN P VG + TD D +L ++ F ID TGVI DRE Q Y F A D S+ + V I V DVNDN PVF +P+S+ + + G +T++ A D D +A +QYS+++ LF++DK +G + LQ + GA D + L ++ D+G P TF ++ L + G + ++G ++IA+I + +I+V IF+ L+R
Sbjct: 6 QTFPLVVLLTCVLILCKAQERDYIVKEEQPENVRIGNLLKDLDLNLDPSIRLSSPLQFKPVYKTGDVPLVRVEANTG-EIF-------------------TTNHRIDREKLCSGVFTEKRCYYEIEVAVLPDEIFRLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQNYELVKSVTEFGLDIIETPEGDKWPQLIVQQNLDREKRDTFVMKIKVEDGGNPPKSSTAILQVTISDVNDNRPIFQDSELEVS--VPENAPTGTSVAQLHATDADWGSNAQIHFAFSNQISSSTKRHFAINSSTGLITVKQPLDREVTPVHKL---IVL---ASDGGSTPSRATVIVNVTDVNDNVPAIDTRYI-INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDH---DVPFRLKPVF-NDQFLLETAAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENNDPSTQLIK-ISATDADSGSNAEIIYTL-GPDAPDGFHIDRRSGILSVGKRLDREKQERFSFIVIARDNGSTPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAAITLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAIDGGQPPTSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVRTTTTPGAVVTRVFAIDNDTGMNAELQYSIISSIIITSRVSPRGLFTIDKISGNITLQEKIVGA---DLGLHRLVVKVRDLGQPESLQAITLVHLFVNDTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVI-VVIAIIAGTMTVILV-IFVTALVR 842
BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238]) HSP 1 Score: 256.914 bits (655), Expect = 6.542e-71 Identity = 247/792 (31.19%), Postives = 373/792 (47.10%), Query Frame = 1
Query: 19 KMFILILILFPDLML--SKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTG------YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN---CFIILKVTLHGTD--RIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFIL----VQEHGLYLQTLKQ--LDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKI---IPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYF-LVKPDGEIIVLRQLDYE-SGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAES---LSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTN----ITVDIGDVNDNSPKFSDNIIHMSIKEN--MDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMP--NSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTF 2277
K F L+ L + L S + + IY I+EEL +IG + D+ ++ +TG Y +++ +L + +NRIDRE +CP SS C ++V + D R++ I+I + D ND++P + + E SR +IP + DPD G N KY L + F L E + Q + Q LDRE K Y + I D G P KS ++V + D+NDN P +FR +I IPE P+ + V++L +DAD G N E + F + K F L G I V R LD E + IHK AS G + + V I ++D ND P I + + G + E P++T +ALI SDKD + V C F E L DN ++ L T+ +LD E K +I+ +DS K S N + V + D NDN P F+ +I +++ EN D TT + A D+DSGKN +VY + + F +D +TGV+ + DRE ++ + F + A D+G+P L + +V V DENDN + ++F V EN P + VG + TD D + SL ++D+ F +D +GVI + DRE Q Y F A D S+++ V I V DVNDN P+ P N+S + LS G + ++ A D D +A ++Y++V+ LF +D TG + L+ + D + L + D+G P+ T
Sbjct: 4 KDFYLLGSLLACIWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTSAATGASANLVYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSFEDAECSFEIEVVVLPNDYFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKP-----VFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVL------ASDGSSSPARATVIINVTDVNDNPPNIDLRYI-ISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVIC------FIEKDVPFHLKAVYDN-QYLLETSALLDYEGTKEYNFKIVASDS--GKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTT---LSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLS--SIPGSVVAEVFAVDSDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLE---EKPAPTDIGLHRLVVNISDLGYPKSLHTL 766
BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 255.758 bits (652), Expect = 1.228e-70 Identity = 250/849 (29.45%), Postives = 386/849 (45.47%), Query Frame = 1
Query: 82 IYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTL-----HGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFIL-----VQEHGLYLQ---TLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCT-TDNFGFAESLSLTPTNDNN-EFKLVTARMLDREMEKRIFIRIICTDSVNHKTST--NITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDI---PFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSI---VMIFVEDVNDNPPVFKMP-NSSLNSISLSYKEAAGFSLTKIV-AEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGT-PRMCTTFRGFKIN-IQRNGDLTKTKGQPNLLI----DSSGMSE--------NII---IALITFLLFMIMVTIFIIFLLRRKSRNNLKP-RKESQNIH 2496
+YR++EE P +IG L D S E+ P + V D ++++ ++ R+ C++ +V++ + + R++ RIE+ D+ND++P + ++ + E G+ SIP++ D D NG Y L + D L + G L L LDRE K Y LTI + D G P + + + V + D NDN+P+F + + E PV VL++ D+D G NGE +S + K + + G I V LD E I+ F V+ +D + +E+ ++N +I+ + T+SE G A I E+ P+ T+VAL+Q SDKD E+ VTC + F + T+DN ++ L T LD E K + I+ DS N S+ ++ V + DVNDNSP FS I + E G T V A D DSG N + Y+I F ID TG ++++ LDRE K Y+F + A+D GSP T T ++ V D NDN S Y F V EN PP +PVG V D D + L D GKF + TG I++ DRE + Y FR A D S V I V D NDN PV P NSS +S A+ S +V AED D +A + +S+ LF + +G + L + + H + L + D G PR T +N N L + +L D +G E NI+ +A + ++ +I+ +FI ++R++++ + +KE+++++
Sbjct: 25 LYRVQEEQPPNTLIGSLAADHGLPDSGHLYKLEVGAPYLR-VDGKTGDIFTTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPLATDRDSERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAE--VSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGPLDREE-INSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSE-GIANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETI-LDVTATDADSGTNAELFYNIVGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKPSNSSFRQLS---PVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHG---GLHRLVVRVSDRGKPPRHATALVHIYVNETISNVSLVEALVGHSLYTPLDRDIAGDPESSFAAQRSNILFGSLAGVAGVVILILAVVFIRHRIQRETKSGYQAGKKETKDLY 861
BLAST of Protocadherin 1 vs. Ensembl Medaka
Match: pcdh7b (protocadherin 7 [Source:NCBI gene;Acc:101166584]) HSP 1 Score: 256.529 bits (654), Expect = 1.485e-70 Identity = 248/873 (28.41%), Postives = 395/873 (45.25%), Query Frame = 1
Query: 85 YRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVN-NRIDREAICPTSSI----NCFIILKVTLHGTDR----IVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTL---------------------------ESSTDTFILV------QEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPM-RTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDN---FGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTN--ITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAH-DIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD-NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN---SASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDL-------------------TKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFL--LRRKSRNNLKPRKE 2481
YR+ EE P +G + D+ + + + + G + F +D I+ +L+ N RIDRE + I CFI +V++ G + + ++ I D+ND++P++ + E G+ +P + D DFG NG +Y L S + F L E L LDRE + Y+LT+ D G P +S + + V I D+NDN PRF S++ +PE S +L+L +DAD G NG+ + F S+ + L + G + VL ++D E + + F V+ +D + ++ V + I DEND P I+ + R + G A + E+ + T +AL+Q SD+D E+ VTCT F + + + ++ L T+ LD E + + I+ DS + ++N + V +GD NDN P FS N++ +S EN G V A D DSGKN + YS+ + + F+IDS +G IR LDRE K Y+F ++A D G L + T +V VDD+NDN + F VKEN PN+PVG V D D Q L + F+I+ TG I + DRE + Y FR A D + SA++ V +FV D NDN P P +S ++ L + ++A D D +A + YS++ LF +D TG + L L+ H + L ++ D G P TT +++ N L T G PN D S +I+I +++ ++ +I++ + ++ R K++N + K+
Sbjct: 32 YRLAEEGPADVRVGNVAADLGMVAGSREVTFTL----ESGSEFFKIDNITGELTTNEKRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVDLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQDNGENSRRSGSSGDSYSGKRRFDEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEAD--LPENSSPGSPILQLKAADADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREE-VSQLRFTVMARDRGQP--PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQGENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAPLDYETTQEYNVVIVAVDSGSPSLTSNNSLLVKVGDTNDNPPIFSKNVVQVSFPENNAPGERVTT-VTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVNTNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTL-LPPSSTVRTVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDGATGVISLMAKLEQKH---YGLHRLVVQVTDNGQPSQSTTTL---VHVYVNETLSNSTIVETQVARSLSTSLNTNIAGDPNY--DLSKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKK 885
BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000010675.1 (SMESG000010675.1) HSP 1 Score: 1920.59 bits (4974), Expect = 0.000e+0 Identity = 961/961 (100.00%), Postives = 961/961 (100.00%), Query Frame = 1
Query: 58 MLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKESQNIHPTLNPYFQNVNGKSIMEFDQCSAEICELTSRLSPECETSAPINQLPYYNMSDQYHCGNFIPVCSEHSYNIPMIMSYNSHLPDNRALKMIPETQGYYTKYEINDNNKFPEELTSNLTNQDITTISSSTPSQKLKSTTQTCPRKPQSSFV 2940
MLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEFSFSFSPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYERSSESRVEIIISDENDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKESQNIHPTLNPYFQNVNGKSIMEFDQCSAEICELTSRLSPECETSAPINQLPYYNMSDQYHCGNFIPVCSEHSYNIPMIMSYNSHLPDNRALKMIPETQGYYTKYEINDNNKFPEELTSNLTNQDITTISSSTPSQKLKSTTQTCPRKPQSSFV
Sbjct: 1 MLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEFSFSFSPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYERSSESRVEIIISDENDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLRRKSRNNLKPRKESQNIHPTLNPYFQNVNGKSIMEFDQCSAEICELTSRLSPECETSAPINQLPYYNMSDQYHCGNFIPVCSEHSYNIPMIMSYNSHLPDNRALKMIPETQGYYTKYEINDNNKFPEELTSNLTNQDITTISSSTPSQKLKSTTQTCPRKPQSSFV 961
BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000027424.1 (SMESG000027424.1) HSP 1 Score: 413.69 bits (1062), Expect = 2.272e-127 Identity = 291/850 (34.24%), Postives = 454/850 (53.41%), Query Frame = 1
Query: 85 YRIKEELPITHIIGYLNNDIPKFRSTDSTG-YEILNPRDKGVQNFILDPISSKLSVNNRIDREAICPTSSIN--------------CFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDH-GSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQ----TIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD------KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPR-MCTTFRGFKINIQRNGDLTKTKG-QPNLLIDSSGMSEN-----IIIAL-ITFLLFMIMVTIFII-------FLLRRKSRNNLKPRKESQNIHPTLNP 2511
Y+I+EE+ + ++G L ++ F++T+S G EI N D+ V+ F ++ ++ +L V RIDR+ +C S+ C I + V + + + I I+D+ND+ P+W + + +V F +G ++ S+P +FD D G N QI+Y+ + F L E G YLQTL+ LDRE K Y T+I++D+G P ++G +EV V I D+NDN+P FS I+R K + E V +++ KL SDAD+G NG+F+F F+ I K YF ++ DG +IV LD + G ++ FKV+++D A Y +SS++ V + I+D NDE P++K M +S T + E+ + T + +++ +D+D+ DTV+C DN FA P ++K+ T DRE +RI C DSV + S+N +++I D+NDN P F+ + M IKEN T ++ A D DS ++ + P + F+ID TG+I + DRE+ Y ++A D P + T T V + DENDN + Y F + EN+ PNT VG V ATD D Q ++ Y L+Y S + F I+ +G I LDRE + Y F + D K N+ +S V + ++DVNDN P F +PN++ +S +S K+ G + + AED D +++RI Y++ ++FS+D TG L L SL + + HY+L + ACD G P+ +CTTF+ +I I NG+ K KG N DS + N III L I F+ +I + I F R SR K ++ ++ + P
Sbjct: 15 YKIQEEVALETMVGDLYKNV--FQATNSKGKLEIKNLNDRFVKCFKIN-MNGQLVVARRIDRDQMCEKSTSQPIYTKNSRITPEEECKIFINVASPSLNIMTKVVITIEDINDNIPSWNLQRIEVKFIDGCKERTKVSLPPAFDKDIGQNAQIEYSFKERDLPFRLDTEDGFYLQTLQTLDREQKESYTFTLIASDKGNPVQTGEIEVHVVIEDLNDNSPIFSKPIYR-FKAVSEDSAVGTIIGKLEASDADSGVNGKFNFKFAEAVPEIVKHYFQIQSDGTVIVAAPLDSDRGNNELKFKVVVEDEALRPYSKSSDATVYVYINDVNDEKPELKLIFMNHDSRTNKPFVVEHTKIGTLIGILEVTDRDYNNKDTVSCNVDNSQFALISEDRPV----KYKITTNMDFDREKMTTADLRIFCRDSVGNLASSNHSINIKDINDNPPNFTKSFYVMKIKENQPVHTMLPSKLVATDPDS-ESTIQYFISPEYSSNFSIDRETGIISTLVSFDREICASYTIKVIAKDSIKEPINTGTCTVQVIILDENDNKPVFTHEFYTFHIPENNFPNTAVGIVKATDLDEQDSQSSLSYRLEYSSKTRPFKINSRSGAITAIITLDREKETFYSFIVYVEDGNDYPMKRNTVTSSVTVVIDDVNDNSPKFIIPNATKSSFDISIKDTVGHKIINVYAEDADVSDNSRIYYNITAGNDENIFSIDSATGLLLLSDSLQSNQQKPQPHYTLSVTACDYGKPKQLCTTFKNLRI-IVNNGEDYKYKGLDSNQEPDSKDKNTNVHHEAIIICLAIVFITLLISASALICLIKCKPGFWCRSSSRATSKDKRFETGVNSQMLP 854
BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000067388.1 (SMESG000067388.1) HSP 1 Score: 397.512 bits (1020), Expect = 2.058e-125 Identity = 258/653 (39.51%), Postives = 376/653 (57.58%), Query Frame = 1
Query: 523 DTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPDGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTP-----TNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSIPA-HDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSS-LFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINI--QRNGDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLRRKS 2454
++F L Q++GLY++ + LDRE K+ Y++ II+ D G P KS L+V VEI+D+NDN P+F+ SIFRP K + E P +V+L L D D G NGEF+F SP + + +FLV+P GE+ + ++DY+S F+FKVI++DHA Y SSE+ VEI I D NDE+P I FYP +S T I EN T + I D+D K D V C + F ++ L P TN+ NEF +V+ R DRE E ++ I CTD+ +H T N+T+ I DVNDN P+F+ H IKEN GT + ++ DKDS NG SI + D FTID + +++SK DRE ++++ I+A DHG +L+S+ VH+ D NDNPVII +F + EN + +G + ATD DNQTI+Y +D S S KF+I++ +G + ++ LDRE Q + A+D L++AS+ V + V D NDN P+FK N I + E+ GF + KIVA D D + ++Y + Y LF+LD D+G L+L SL D + + LDIEACD G P CT F G +I RN ++ + ++EN++IA I+ LL ++++ + + ++KS
Sbjct: 7 NSFRLFQDNGLYIENTQMLDREKKNVYEIIIIAQDNGSPYKSNELQVTVEIIDVNDNPPKFTDSIFRPEKQVFENSPPGTVILLLKAVDHDFGNNGEFTFRMSPNTSPEVEKHFLVRPTGEVEIKSKIDYDSDKTHFEFKVIVQDHAVEPYSLSSEAVVEIDIQDINDEFPTIAFYPRNPDSATMNPTILENSSTMTPIGQISVHDRDSKGLDKVHCES---YFLDNDKLNPIIAIGTNEPNEFNIVSNRKFDRETESKLNAEIRCTDTSDHSTVKNLTIIILDVNDNPPEFNKGTYHFYIKENEPIGTMLDNRMFVSDKDSNNNGKFTLSIESPGDSFFTIDQQNQILKSKVTFDREQVSVHKLKILAIDHGDERLTSSCIVYVHIKDVNDNPVIITPLINQFYISENK-QRSLLGVIKATDFDNQTIYYLIDNKSQS-KFSIEKHSGRLFLQNSLDREEQETHHITVTASDSLHTASTTVTVVVVDENDNKPIFKNMNK---VIKIDASESPGFKICKIVATDADHGNNGLVKYILKKSSYKEPLFNLDSDSGDLHLAVSLHTIRPIDTNTF-LDIEACDQGQPNQCTIFSGLEIQWTTNRNEPASRESDKSKKSSYDQFLNENVLIAAISGLLVLMIIIMIAFIVFKQKS 650 HSP 2 Score: 51.2174 bits (121), Expect = 4.117e-6 Identity = 46/151 (30.46%), Postives = 71/151 (47.02%), Query Frame = 1
Query: 250 NNRIDREAICPTSSINCFI-ILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSR--KSIPISFDPDFGDNGQIKYTLESSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDN 693
N + DRE S +N I + H T + +TI I DVND+ P + + E E G+ + +S D D +NG+ ++ES D+F + + L++ DRE S +KL I++ D G + V V I D+NDN
Sbjct: 252 NRKFDRET---ESKLNAEIRCTDTSDHSTVKNLTIIIL--DVNDNPPEFNKGTYHFYIKENEPIGTMLDNRMFVS-DKDSNNNGKFTLSIESPGDSFFTIDQQNQILKSKVTFDREQVSVHKLKILAIDHGDERLTSSCIVYVHIKDVNDN 396
BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000006531.1 (SMESG000006531.1) HSP 1 Score: 342.043 bits (876), Expect = 2.841e-102 Identity = 269/812 (33.13%), Postives = 407/812 (50.12%), Query Frame = 1
Query: 181 ILNPRDKGVQNFIL--DPISSKLSVNNRIDREAIC-----PTSSINCFIILKVTLHGTDRIVTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLESSTDTFILVQ-EHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTE-TSIAKSYFLVKP-DGEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFYPMRTNS-ETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSLTPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI-PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKDNQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATD----------KLNSASSIVMIFVEDVNDNPPVFKMPNSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRN-----GDLTKTKGQPNLLIDSSGMSENIIIALITFLLFMIMVTIFIIFLLRRKS------------RNNLKP---RKESQN 2490
+LN RD V +F + D +L IDRE IC +S C I +++ L G+ I I+IE+ D ND+ P W + V F +G+ G RK+IP + D D I Y L T F LV+ LY+Q LD E S + L + +++ GI +S L ++V I+DINDN P FS +F + IPE +P+ SVVL L+ +D D+G NGEFSF + + A YF++K GEI+V + LDY+ G+ F FKVI++DHA L Y SSE+ V + + D NDE PQI FY ++ N FA++ EN P +T V I +D DF E+D V C + N F L + +F++ T + DRE + + F+ I CTD H N T+ I D NDN P F + ++ + ENM +GT ++++ DKD N V Y + A + F I++ G + S DRE ++ + D G+ K SS + + D +DNP++ + F + ENS NT VG V A D D TI YS+ + F ID+ +GV+ T S LDRE +Y + A D K N + ++V I ++D NDN PV PN + N ++ S + S+ +I + D D E+ + Y + NE +F + + +G ++L+ E + + ++ CD G CT F +N+ + L TK + + + I+ ++IT L +T I+ L+ +S N+KP RK+ QN
Sbjct: 52 VLNQRDFKVSHFGIKFDSGILRLITLKNIDREVICEYEKNKINSDGCKIDIQIILGGSLTIHEIQIEVIDTNDNIPYWNSDSINVEFMDGDLPGIRKTIPTAIDLDSSVFSTIFYNLSDPTRFFKLVETADNLYIQNSLMLDSETTSKFTLHLYASNPGI-DRSSSLLIQVTIVDINDNPPLFSKPLFSRNEPIPEDIPINSVVLVLSATDRDSGLNGEFSFRIDSNKINNKAIEYFIMKSVTGEIVVRKPLDYDRGMRNFFFKVIVEDHAFLPYSLSSEAFVNLTVGDVNDEIPQIDFYAIQNNKISNQFAVL-ENTPKNTLVGFIMTNDVDFNENDEVFCRSLNSFFV----LNSMSTREQFQIYTTVIFDREQQDKHFVSIECTDQAYHMNYINKTLLILDDNDNDPYFFPDSLNFYLYENMPSGTILTGKLRSFDKDIDNNSQVHYYLHEASNKDFKINTHEGTLISLRSFDREERSSLNLTVYVEDEGNVKRSSKGFIHIVILDMDDNPIVFTKDKFVFHISENSVINTVVGSVQAVDLDENTIVYSILNPKNDYIFLIDKFSGVLTTNSYLDREKVDRYFIKVVAFDSNIPIEEAMSKNNKSIALVEIKIDDENDNFPVIIFPNFTHNRLNASLFQPPEKSIFQIYSTDSDSGENQTLIYGMENEDSHKIFKIHRTSGLVFLKTGNSNLDVEYFSTHVIKLKVCDSGNQPKCTVFHPLYVNLTSDYPINTHVLENTKKEKKIF-----TAFWILTSIITVSLLTAFITGSILLYLKIRSNQAKIIVNMFEDHRNIKPNCRRKKFQN 852
BLAST of Protocadherin 1 vs. Planmine SMEST
Match: SMESG000034072.1 (SMESG000034072.1) HSP 1 Score: 338.576 bits (867), Expect = 1.423e-99 Identity = 271/855 (31.70%), Postives = 425/855 (49.71%), Query Frame = 1
Query: 37 LILFPDLMLSKSPDHIYRIKEELPIT----HIIGYLNNDIP-KFRST---DSTGYEILNPRDKGVQNFILDPISSKLSVNNRIDREAICP-TSSINCFIILKVTLHGTDRI--VTIRIEIDDVNDHSPNWKINKHKVIFNEGEHAGSRKSIPISFDPDFGDNGQIKYTLE----SSTDTFILVQEHGLYLQTLKQLDREHKSGYKLTIISTDRGIPSKSGRLEVEVEILDINDNTPRFSTSIFRPTKIIPETMPVQSVVLKLTGSDADAGQNGEXXXXXXPTETSIAKSYFLVKPD-GEIIVLRQLDYESGIHKFDFKVIIKDHASLGYXXXXXXXXXXXXXXXNDEYPQIKFY---PM---RTNSETGFAIIDENKPLSTSVALIQASDKDFKESDTVTCTTDNFGFAESLSL-TPTNDNNEFKLVTARMLDREMEKRIFIRIICTDSVNHKTSTNITVDIGDVNDNSPKFSDNIIHMSIKENMDAGTTTNKQVKAIDKDSGKNGFVVYSI----PAHDIPFTIDSRTGVIRSKDRLDREVKNLYQFIIVASDHGSPKLSSTVTALVHVDDENDNPVIIETSPYEFKVKENSPPNTPVGRVIATDKD------------NQTIFYSLDYVSDSGKFNIDRTTGVIVTKSKLDREIQHKYQFRAFATDKLN----SASSIVMIFVEDVNDNPPVFKMP-NSSLNSISLSYKEAAGFSLTKIVAEDPDDKESARIQYSVVNEKYSSLFSLDKDTGFLYLQRSLDGAHAEDRDHYSLDIEACDMGTPRMCTTFRGFKINIQRN--GDLTKTKGQPNLLIDSSGMSEN---IIIALITFLLFMIMVTIFIIFLLRRKS 2454
L+LF + S++ + +RI EE PI + +L + I ++R T D E ++ +DK + + RIDRE +C C +++ T R V + EI D+ND+ P W N ++++ E S K + I++D D G+N IKY L+ + + + E+ L L +D E K + +TI++ DRG P S L V+V ++DINDN P+F ++F P + + ET V++++LK+T D D+ QNG ++ P+ + F + D GE+ + + LDY+ G + F VI KD A YE SS + VEI ++D NDE PQI Y P R N I + P + +A IQ D D + + C+ DN ES L + N F L ++ DRE ++ +RI C D+ ++ S NI +++ D NDN PKF+ + ++ EN QV+AIDKD GKN + Y+I P D F IDS TG + LDRE ++ Y ++A D G P L+ T L+ V+D ND P + ET Y F++ E++ N+ VG V ATD+D + YSL + KF I + +G I+ SKLDRE + Y A + +N SA+ I V D NDN P F P N+SL IS+ +++ G + A D D+ ++A + YS+V +F+LD +G L+L + ++G L + CD G P+ C+ + ++ D + G N L+ +G++E+ II LI + ++M + + FL+R K+
Sbjct: 6 LLLFILIKYSQTMKNYFRITEEEPIGTDLFEVSKFLRDKIKSEYRFTVIGDPNFSECISIQDK----------TGMTKIKKRIDRETLCADNQDGKCVKSIRLIFKNTYRKEGVDLEFEILDINDNRPMWPTNVVELLYPESTEKQSIK-LAIAYDKDIGENAMIKYYLQPIYHDNLNFNLENSENRLILTPKFDVDYETKRFFNITIVAEDRGRPVLSSTLNVKVTVIDINDNRPQFIQNVFHPNQAVYETTSVEAIILKVTAIDKDSEQNGRINYYIDPSMPQFIRDQFFLDSDTGELKLKKPLDYDRGHKSYKFIVIAKDSAPAPYELSSSATVEIQVADVNDEIPQINMYFTTPFVSDRYNGTVHINIPENMNPQQSDLAHIQIEDTDEDDKSFIDCSLDN---KESFRLISDINKVKSFILSASKSFDRENQQTEHVRITCRDNGKNENSKNIIINVTDKNDNPPKFAHK-FNFNVNENTSYRNRDIGQVEAIDKDLGKNAELRYTIINVQPRSDARFRIDSFTGKMYIDAPLDREEQDHYNITVIAVDQGEPSLTGTGNILILVEDINDMPPVFETVEYRFQIPEDASVNSKVGVVQATDRDIGKNARISYHFLSDAFPYSLHRTNAFEKFQIKKDSGEIMITSKLDRETKPSYSIIIEAINVVNPRKFSATVSATITVLDCNDNAPKFTAPINNSL--ISIDTEKSIGTEIALFRATDADENKNAELTYSIVRATDPYVFNLDYTSGILFLAKKIEGFR-----KLRLTVRVCDSGLPQKCSEDLMIIVTTTKSTFTDAENSNGDNNSLV-KTGITESNGAIIACLIVIFVILVMAMVIMFFLIRNKN 837 The following BLAST results are available for this feature:
BLAST of Protocadherin 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30031313 ID=SMED30031313|Name=Protocadherin 1|organism=Schmidtea mediterranea sexual|type=transcript|length=3093bpback to top protein sequence of SMED30031313-orf-1 >SMED30031313-orf-1 ID=SMED30031313-orf-1|Name=SMED30031313-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=974bp MFILILILFPDLMLSKSPDHIYRIKEELPITHIIGYLNNDIPKFRSTDSTback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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