SGF29 C-terminal domain-containing protein

Overview
NameSGF29 C-terminal domain-containing protein
Smed IDSMED30031292
Length (bp)1411
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SGF29 C-terminal domain-containing protein (SMED30031292) t-SNE clustered cells

Violin plots show distribution of expression levels for SGF29 C-terminal domain-containing protein (SMED30031292) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SGF29 C-terminal domain-containing protein (SMED30031292) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SGF29 C-terminal domain-containing protein (SMED30031292) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30031292

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30031292SMESG000074552.1 SMESG000045951.1 SMESG000035119.1 SMESG000029653.1 SmedASXL_016250SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30031292SMESG000074552.1 SMESG000045951.1 SMESG000035119.1 SMESG000029653.1 SmedASXL_016250SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Human
Match: SGF29 (SAGA complex associated factor 29 [Source:HGNC Symbol;Acc:HGNC:25156])

HSP 1 Score: 195.282 bits (495), Expect = 2.694e-58
Identity = 114/287 (39.72%), Postives = 166/287 (57.84%), Query Frame = 1 
Query:   91 LSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVI------RKVEEDIKSLQGMS-----TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            L+EL +L K    +R + +  L  +  T+E++++  K+     +KL+   T   +D+  +  + +  L+KI  I      R++   I  L   S     T+RRGV+M++LQ SA +LP+WIGKPG   P LCG++P SG+ +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   ++IPLP+WKA P   P+A+F+    VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:   14 LTELHQLIKQTQEERSRSEHNLVNIQKTHERMQTENKISPYYRTKLRGLYTTAKADAEAECNILRKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGDKPPPLCGAIPASGDYVARPGDKVAARV-----KAVDGDEQ--------WILAEVVSYSHATNKYEVDDID-EEGKERHTLSRRRVIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 286
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Human
Match: SGF29 (SAGA complex associated factor 29 [Source:HGNC Symbol;Acc:HGNC:25156])

HSP 1 Score: 75.0998 bits (183), Expect = 3.673e-16
Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 1 
Query:  733 DAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            +A+F+    VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:   22 EALFQKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 83
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Celegans
Match: Y17G9B.8 (pep chromosome:WBcel235:IV:4757179:4758840:-1 gene:WBGene00021205.1 transcript:Y17G9B.8.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y17G9B.8)

HSP 1 Score: 102.449 bits (254), Expect = 1.160e-24
Identity = 63/214 (29.44%), Postives = 99/214 (46.26%), Query Frame = 1 
Query:  286 LVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFD-LDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISIN 924
             + N +  +++V E     Q    I R  +M +++     LP+W                 + ++    G  V A+ P + +K   G S     +  +WILA++    S  +    E  DV++ K+K        ++PLPKWKA P     A+F+    VL LYPQTTCFY  IV   P+   + Y + FED SY  G+ P + + QKYV++  
Sbjct:   23 FIRNLLDEVKRVAEMDYRSQMAGDISRRDLMELIKVRGDLLPLW-----------------TSHDTQFPGEYVGAIAPQDGSKLGDGDSVAAFSKDGNWILADIVTCHSNSRY---ECRDVDDDKKKLTVFARSHLLPLPKWKANPASDKHALFEKNAIVLALYPQTTCFYKGIVHSPPADFREPYQVAFEDDSYASGFCPPMPVAQKYVVAFR 216
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Celegans
Match: T22B7.4 (pep chromosome:WBcel235:X:5638582:5641363:-1 gene:WBGene00020673.1 transcript:T22B7.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T22B7.4)

HSP 1 Score: 73.1738 bits (178), Expect = 1.474e-13
Identity = 48/160 (30.00%), Postives = 75/160 (46.88%), Query Frame = 1 
Query:  442 PGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISI 921
            P   G++P+  N  L    +VAA V                EE N+WILAEVK   S  +   + D+D +E K+       ++IP+P++      YP         VL +YP TTCFY  IV E P  +   Y + F D+  P   +  +++ ++YV++ 
Sbjct:  138 PYGAGALPLQKNTRLEKYDEVAAFV----------------EETNTWILAEVKGSISNHRYECI-DVDDQE-KKLLVFTRKQLIPMPRFTVNYDKYPHMALPENAIVLAVYPGTTCFYDGIVHEPPKIVSGFYKIRFTDNQKPGKLSDPMEVSERYVVAF 279
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Fly
Match: Sgf29 (gene:FBgn0050390 transcript:FBtr0342888)

HSP 1 Score: 158.688 bits (400), Expect = 1.071e-44
Identity = 90/224 (40.18%), Postives = 122/224 (54.46%), Query Frame = 1 
Query:  289 VLNKIQVIRKVEED----IKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNTMQAALS 948
             L KI  IR +  +     ++      IRRG +M M+Q SA++LP+++GK G   P LCG++P  GN +   G  VAAL                ++E  +WILAEV ++   +  Y V DID EE K++  L   K+IPLP  +A P     A+F   T V+ LYPQTTCFY AIV   P    +DY + FEDSSY  GYA  L + Q+YVI+   T + A S
Sbjct:   72 ALAKIHEIRSIRNERRIQARNAGNKEAIRRGALMKMVQLSAQTLPLFVGKLGERAPALCGAIPAEGNYVAKVGDNVAALAKG-------------IDEEENWILAEVVQFLHRQNKYDVIDID-EEQKDRHVLSKRKVIPLPLMRANPETDGHALFPKDTVVMALYPQTTCFYKAIVHRLPQTATEDYEVLFEDSSYTNGYAEPLPVAQRYVIAYRPTKKGAGS 281
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Fly
Match: Sgf29 (gene:FBgn0050390 transcript:FBtr0071617)

HSP 1 Score: 158.688 bits (400), Expect = 1.071e-44
Identity = 90/224 (40.18%), Postives = 122/224 (54.46%), Query Frame = 1 
Query:  289 VLNKIQVIRKVEED----IKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNTMQAALS 948
             L KI  IR +  +     ++      IRRG +M M+Q SA++LP+++GK G   P LCG++P  GN +   G  VAAL                ++E  +WILAEV ++   +  Y V DID EE K++  L   K+IPLP  +A P     A+F   T V+ LYPQTTCFY AIV   P    +DY + FEDSSY  GYA  L + Q+YVI+   T + A S
Sbjct:   72 ALAKIHEIRSIRNERRIQARNAGNKEAIRRGALMKMVQLSAQTLPLFVGKLGERAPALCGAIPAEGNYVAKVGDNVAALAKG-------------IDEEENWILAEVVQFLHRQNKYDVIDID-EEQKDRHVLSKRKVIPLPLMRANPETDGHALFPKDTVVMALYPQTTCFYKAIVHRLPQTATEDYEVLFEDSSYTNGYAEPLPVAQRYVIAYRPTKKGAGS 281
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Zebrafish
Match: sgf29 (SAGA complex associated factor 29 [Source:ZFIN;Acc:ZDB-GENE-041010-62])

HSP 1 Score: 193.356 bits (490), Expect = 1.206e-57
Identity = 112/300 (37.33%), Postives = 172/300 (57.33%), Query Frame = 1 
Query:   52 MSVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMS-----------TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            M++   + ++ + L+EL +L K    +R + +  L  +  T+E++++  K      +KL+   T   +D+  +  + +  L+KI  I+ + E+ +    M+           T+RRGV+M++LQ SA +LP+WIGKPG + P LCG++P S + +   G KVAA V     K + G  +        WILAEV  Y+     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F     VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:    1 MALVSADTKIAELLNELHQLIKQTQEERSRSEHNLLNIQKTHERMQTENKTSPYYRTKLRGLYTTAKADAEAECSILRRALDKIAEIKSLLEERRIAARMAGVYSDNDPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGESPPPLCGAIPASSDYVAKQGDKVAARV-----KAVDGDEQ--------WILAEVVSYNHSTNKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFSKDQLVLALYPQTTCFYRALIHTPPHRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 286
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Zebrafish
Match: sgf29 (SAGA complex associated factor 29 [Source:ZFIN;Acc:ZDB-GENE-041010-62])

HSP 1 Score: 193.356 bits (490), Expect = 1.206e-57
Identity = 112/300 (37.33%), Postives = 172/300 (57.33%), Query Frame = 1 
Query:   52 MSVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMS-----------TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            M++   + ++ + L+EL +L K    +R + +  L  +  T+E++++  K      +KL+   T   +D+  +  + +  L+KI  I+ + E+ +    M+           T+RRGV+M++LQ SA +LP+WIGKPG + P LCG++P S + +   G KVAA V     K + G  +        WILAEV  Y+     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F     VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:    1 MALVSADTKIAELLNELHQLIKQTQEERSRSEHNLLNIQKTHERMQTENKTSPYYRTKLRGLYTTAKADAEAECSILRRALDKIAEIKSLLEERRIAARMAGVYSDNDPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGESPPPLCGAIPASSDYVAKQGDKVAARV-----KAVDGDEQ--------WILAEVVSYNHSTNKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFSKDQLVLALYPQTTCFYRALIHTPPHRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 286
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Zebrafish
Match: sgf29 (SAGA complex associated factor 29 [Source:ZFIN;Acc:ZDB-GENE-041010-62])

HSP 1 Score: 183.341 bits (464), Expect = 2.168e-54
Identity = 91/188 (48.40%), Postives = 121/188 (64.36%), Query Frame = 1 
Query:  355 TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            T+RRGV+M++LQ SA +LP+WIGKPG + P LCG++P S + +   G KVAA V     K + G  +        WILAEV  Y+     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F     VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:   76 TMRRGVLMTLLQQSAMTLPLWIGKPGESPPPLCGAIPASSDYVAKQGDKVAARV-----KAVDGDEQ--------WILAEVVSYNHSTNKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFSKDQLVLALYPQTTCFYRALIHTPPHRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 249
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Zebrafish
Match: sgf29 (SAGA complex associated factor 29 [Source:ZFIN;Acc:ZDB-GENE-041010-62])

HSP 1 Score: 105.145 bits (261), Expect = 1.094e-25
Identity = 75/227 (33.04%), Postives = 122/227 (53.74%), Query Frame = 1 
Query:   52 MSVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMS-----------TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPL 699
            M++   + ++ + L+EL +L K    +R + +  L  +  T+E++++  K      +KL+   T   +D+  +  + +  L+KI  I+ + E+ +    M+           T+RRGV+M++LQ SA +LP+WIGKPG + P LCG++P S + +   G KVAA V     K + G  +        WILAEV  Y+     Y V+DID EEGKE+  L   +IIPL
Sbjct:    1 MALVSADTKIAELLNELHQLIKQTQEERSRSEHNLLNIQKTHERMQTENKTSPYYRTKLRGLYTTAKADAEAECSILRRALDKIAEIKSLLEERRIAARMAGVYSDNDPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGESPPPLCGAIPASSDYVAKQGDKVAARV-----KAVDGDEQ--------WILAEVVSYNHSTNKYEVDDID-EEGKERHTLSRRRIIPL 213
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Zebrafish
Match: sgf29 (SAGA complex associated factor 29 [Source:ZFIN;Acc:ZDB-GENE-041010-62])

HSP 1 Score: 76.6406 bits (187), Expect = 5.533e-16
Identity = 51/166 (30.72%), Postives = 92/166 (55.42%), Query Frame = 1 
Query:   52 MSVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMS-----------TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALV 516
            M++   + ++ + L+EL +L K    +R + +  L  +  T+E++++  K      +KL+   T   +D+  +  + +  L+KI  I+ + E+ +    M+           T+RRGV+M++LQ SA +LP+WIGKPG + P LCG++P S + +   G KVAA V
Sbjct:    1 MALVSADTKIAELLNELHQLIKQTQEERSRSEHNLLNIQKTHERMQTENKTSPYYRTKLRGLYTTAKADAEAECSILRRALDKIAEIKSLLEERRIAARMAGVYSDNDPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGESPPPLCGAIPASSDYVAKQGDKVAARV 166
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Xenopus
Match: pusl1 (pseudouridine synthase like 1 [Source:Xenbase;Acc:XB-GENE-991885])

HSP 1 Score: 185.267 bits (469), Expect = 8.396e-55
Identity = 92/188 (48.94%), Postives = 121/188 (64.36%), Query Frame = 1 
Query:  355 TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            T+RRGV+M++LQ SA +LP+WIGKPG   P LCG++P S + +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F+    VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:   89 TMRRGVLMTLLQQSAMTLPLWIGKPGEKPPPLCGAIPASSDYVAKPGDKVAARV-----KAVDGDEQ--------WILAEVVSYSHAANKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFQKDQLVLALYPQTTCFYRALIHTPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 262
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Mouse
Match: Sgf29 (SAGA complex associated factor 29 [Source:MGI Symbol;Acc:MGI:1922815])

HSP 1 Score: 196.052 bits (497), Expect = 1.065e-58
Identity = 115/287 (40.07%), Postives = 166/287 (57.84%), Query Frame = 1 
Query:   91 LSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVI------RKVEEDIKSLQGMS-----TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            L+EL +L K    +R + +  L  +  T+E++++  K+     +KL+   T   +D+  +  + +  L+KI  I      R++   I  L   S     T+RRGV+M++LQ SA +LP+WIGKPG   P LCG++P SG+ +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F+    VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:   14 LTELHQLIKQTQEERSRSEHNLVNIQKTHERMQTENKISPYYRTKLRGLYTTAKTDAEAECNILRKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGDKPPPLCGAIPASGDYVAKPGDKVAARV-----KAVEGDEQ--------WILAEVVSYSHATNKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRALIHTPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 286
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Mouse
Match: Sgf29 (SAGA complex associated factor 29 [Source:MGI Symbol;Acc:MGI:1922815])

HSP 1 Score: 148.288 bits (373), Expect = 3.780e-42
Identity = 80/168 (47.62%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:  355 TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHI--HDDYSLFF 852
            T+RRGV+M++LQ SA +LP+WIGKPG   P LCG++P SG+ +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F+    VL LYPQTTCFY A++   P  +  H   SL  
Sbjct:    4 TMRRGVLMTLLQQSAMTLPLWIGKPGDKPPPLCGAIPASGDYVAKPGDKVAARV-----KAVEGDEQ--------WILAEVVSYSHATNKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRALIHTPPQRVRSHHGRSLMI 157
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Mouse
Match: Sgf29 (SAGA complex associated factor 29 [Source:MGI Symbol;Acc:MGI:1922815])

HSP 1 Score: 56.6102 bits (135), Expect = 3.012e-9
Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = 1 
Query:   91 LSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVI------RKVEEDIKSLQGMS-----TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISG 474
            L+EL +L K    +R + +  L  +  T+E++++  K+     +KL+   T   +D+  +  + +  L+KI  I      R++   I  L   S     T+RRGV+M++LQ SA +LP+WIGKPG    GLCG     G
Sbjct:   14 LTELHQLIKQTQEERSRSEHNLVNIQKTHERMQTENKISPYYRTKLRGLYTTAKTDAEAECNILRKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGDK--GLCGQTWRQG 150
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Mouse
Match: Sgf29 (SAGA complex associated factor 29 [Source:MGI Symbol;Acc:MGI:1922815])

HSP 1 Score: 53.1434 bits (126), Expect = 6.508e-8
Identity = 40/125 (32.00%), Postives = 68/125 (54.40%), Query Frame = 1 
Query:   91 LSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVI------RKVEEDIKSLQGMS-----TIRRGVMMSMLQDSARSLPVWIGKPG 432
            L+EL +L K    +R + +  L  +  T+E++++  K+     +KL+   T   +D+  +  + +  L+KI  I      R++   I  L   S     T+RRGV+M++LQ SA +LP+WIGKPG
Sbjct:   14 LTELHQLIKQTQEERSRSEHNLVNIQKTHERMQTENKISPYYRTKLRGLYTTAKTDAEAECNILRKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPG 138
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. UniProt/SwissProt
Match: sp|P0C606|SGF29_RAT (SAGA-associated factor 29 OS=Rattus norvegicus OX=10116 GN=Sgf29 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 7.217e-58
Identity = 115/287 (40.07%), Postives = 166/287 (57.84%), Query Frame = 1 
Query:   91 LSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVI------RKVEEDIKSLQGMS-----TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            L+EL +L K    +R + +  L  +  T+E++++  K+     +KL+   T   +D+  +  + +  L+KI  I      R++   I  L   S     T+RRGV+M++LQ SA +LP+WIGKPG   P LCG++P SG+ +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F+    VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:   14 LTELHQLIKQTQEERSRSEHNLVNIQKTHERMQTENKISPYYRTKLRGLYTTAKADAEAECNILRKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGDKPPPLCGAIPASGDYVAKPGDKVAARV-----KAVEGDEQ--------WILAEVVSYSHATNKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRALIHTPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 286
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9DA08|SGF29_MOUSE (SAGA-associated factor 29 OS=Mus musculus OX=10090 GN=Sgf29 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 7.450e-58
Identity = 115/287 (40.07%), Postives = 166/287 (57.84%), Query Frame = 1 
Query:   91 LSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVI------RKVEEDIKSLQGMS-----TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            L+EL +L K    +R + +  L  +  T+E++++  K+     +KL+   T   +D+  +  + +  L+KI  I      R++   I  L   S     T+RRGV+M++LQ SA +LP+WIGKPG   P LCG++P SG+ +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F+    VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:   14 LTELHQLIKQTQEERSRSEHNLVNIQKTHERMQTENKISPYYRTKLRGLYTTAKTDAEAECNILRKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGDKPPPLCGAIPASGDYVAKPGDKVAARV-----KAVEGDEQ--------WILAEVVSYSHATNKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRALIHTPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 286
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. UniProt/SwissProt
Match: sp|Q96ES7|SGF29_HUMAN (SAGA-associated factor 29 OS=Homo sapiens OX=9606 GN=SGF29 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.294e-57
Identity = 114/287 (39.72%), Postives = 166/287 (57.84%), Query Frame = 1 
Query:   91 LSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVI------RKVEEDIKSLQGMS-----TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            L+EL +L K    +R + +  L  +  T+E++++  K+     +KL+   T   +D+  +  + +  L+KI  I      R++   I  L   S     T+RRGV+M++LQ SA +LP+WIGKPG   P LCG++P SG+ +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   ++IPLP+WKA P   P+A+F+    VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:   14 LTELHQLIKQTQEERSRSEHNLVNIQKTHERMQTENKISPYYRTKLRGLYTTAKADAEAECNILRKALDKIAEIKSLLEERRIAAKIAGLYNDSEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGDKPPPLCGAIPASGDYVARPGDKVAARV-----KAVDGDEQ--------WILAEVVSYSHATNKYEVDDID-EEGKERHTLSRRRVIPLPQWKANPETDPEALFQKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 286
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. UniProt/SwissProt
Match: sp|Q5ZL38|SGF29_CHICK (SAGA-associated factor 29 OS=Gallus gallus OX=9031 GN=SGF29 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.984e-56
Identity = 111/291 (38.14%), Postives = 168/291 (57.73%), Query Frame = 1 
Query:   91 LSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIK---SLQGM--------STIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNT 930
            L+EL  L  +   +R + +  L  +  T+E++++  K+     +KL+   T   +D+  +  + +  L+KI  I+ + E+ +    + G+         T+RRGV+M++LQ SA +LP+WIGKPG   P LCG++P +G+ +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   ++IPLP+WKA P   P+A+F+    VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++   T
Sbjct:   14 LAELQRLLGHTQEERSRSEHNLINIQKTHERMQTENKISPYYRTKLRGLYTTAKADAEAECNILRKALDKIAEIKSLLEERRIAAKIAGIYSDAEPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGDKPPPLCGAMPAAGDYVAKPGDKVAARV-----KAVDGDEQ--------WILAEVVSYSHAANKYEVDDID-EEGKERHTLSRRRVIPLPQWKANPETDPEALFQREQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVACKET 290
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. TrEMBL
Match: A0A4E0R148 (SAGA-associated factor OS=Fasciola hepatica OX=6192 GN=D915_007744 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 6.896e-73
Identity = 129/311 (41.48%), Postives = 186/311 (59.81%), Query Frame = 1 
Query:   58 VSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPG-----------------MNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNTMQA 939
            +++ +I+L +   EL+ LCK A  +   G + L  +++  EK ++G+   +++ +       +       Q    Q  L+KI  IR++E DI+   G  + RRGV+MS+LQ+SA+++P+W GKPG                    P LCG++P S   +   G  VAALVP+    +++ ++   L E    ILAEV  Y   K+ Y VED+D EEGK ++ L   K+IPLPKWKA P+ +PDA+F  GT+V  LYPQTTCFY AIV E P HIHD+YSL+FEDSSYPEGYAPA++IPQ+YV+    +  A
Sbjct:    1 MNISQIKLTEQTKELLALCKTAVAEIDSGRNTLISLDNLREKQKNGKVNKSHLKNAYNQAIDEGER----QKAALQCALDKIAHIRQLEHDIRVSLGPRSFRRGVLMSVLQESAKTIPLWAGKPGEKFVFILKFAKLVILFITRAPPLCGAIPASPGTVAQPGDHVAALVPE---PDVAATAACNLSE--GCILAEVVLYDPDKRTYQVEDVDAEEGKVRYTLARSKVIPLPKWKANPVTHPDAIFTKGTAVFALYPQTTCFYKAIVDEVPVHIHDEYSLYFEDSSYPEGYAPAIRIPQRYVVECRESPAA 302
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. TrEMBL
Match: A0A0X3PTJ9 (SGF29 C-terminal domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR86984 PE=4 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 3.775e-72
Identity = 133/289 (46.02%), Postives = 183/289 (63.32%), Query Frame = 1 
Query:   52 MSVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNE-ILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVI 915
            MS+   E EL   ++EL+ELCK A  ++   D+ +  VN+ + K     K P +   KLK      L D+    E      +KI  I+ +E  IK  +G  + RRGV+MS+LQD+A+SLP+W G+ G + P  CG+V  S  E  + +G  VAALVPD   +    ++      + SWILAE+  YS+ KK + V+D+D EEGK ++ L+  K+IPLPKWKA P+  P+A+F  GT VL LYPQTTCFY A+V  SPSH+HD+YSL+FED SYP GYAPA++IPQ+YVI
Sbjct:    1 MSIIAMESELVARVNELIELCKRAVAEQRISDESVGCVNAIHSKP-GKSKSPLDQRKKLKQKLQLALKDAENVQEALLAAQSKILEIKAIEHQIKVAKGPRSFRRGVLMSLLQDNAKSLPLWAGRVGASPPPFCGAVGTSKPEDYVVAGDHVAALVPDPEARGPDSAT------LESWILAEIVAYSAEKKEFRVDDVDAEEGKVRYVLEKAKVIPLPKWKADPVVNPEAIFPKGTVVLALYPQTTCFYRALVDNSPSHVHDEYSLYFEDPSYPNGYAPAIRIPQRYVI 282
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. TrEMBL
Match: A0A4S2LXD7 (SGF29 C-terminal domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_004217 PE=4 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 2.412e-71
Identity = 120/287 (41.81%), Postives = 180/287 (62.72%), Query Frame = 1 
Query:   55 SVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVI 915
            S++  + +L+++  + + LCK A  +  +G   L  +++   K RS +     + S       +     ++ +      LNK+  I +VE +++   G    RRGV+MS+LQ++A+S+P+W+GK G   P LCGS+P S +    +G +VAALVP+    +++ ++   L E    ILAEV  Y + K+ Y VED+D EEGK ++ L   K+IPLPKWKA P+  P+A+F  GT+V  LYPQTTCFY A+V E P  +HD+YSL+FEDSSYPEGYAPA++IPQ+YVI
Sbjct:    3 SLTSGQEQLREYTKDFLSLCKKAVKEVSEGRTTLSNLDALRRKQRSSKVNKPQLKSLYAQAIAEAQRQKTSLMN----ALNKVSQIHQVEHEMRLALGPRNFRRGVLMSVLQENAKSIPMWVGKSGEKAPPLCGSIPASASTTAQAGDQVAALVPE---PDVAATAACNLSE--GCILAEVVSYDAEKRTYQVEDVDAEEGKVRYTLPRSKVIPLPKWKANPVTNPEAIFPKGTTVFALYPQTTCFYKAVVDEVPLQVHDEYSLYFEDSSYPEGYAPAIRIPQRYVI 280
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. TrEMBL
Match: A0A183R0G9 (SGF29 C-terminal domain-containing protein OS=Schistosoma rodhaini OX=6188 PE=4 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.017e-70
Identity = 132/283 (46.64%), Postives = 188/283 (66.43%), Query Frame = 1 
Query:   67 KEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVI 915
            ++ ++K    EL+ LCK A       ++V   ++S + K+R  Q+    + S+LKS  T+ +S++  Q       L K+  IR +E  +++  G  + RRGV+MS+LQ++A+S+P+WIGKPG + P LCG+   S +     G  VAALVP+    +++ ++ +  E     ILAEV  Y+S K+IY VED+D EEGK ++ L   K+IPLPKWKA PI  P+A+F  G++VL LYPQTTCFY AIV E P+HIHD+YSL+FEDSSYPEGYAPA+KIPQ+YVI
Sbjct:    4 EQAQVKDRADELLSLCKKA---VADCNNVKTTLDSLD-KLRCKQRCSKVVKSQLKSLYTQAISEAEHQKATLMAALEKVSEIRAIEYKLRTHVGPKSFRRGVLMSVLQENAKSIPLWIGKPGESPPALCGATAPSPDIPADPGDHVAALVPE---PDVAAAACNLSE---GCILAEVVSYNSDKEIYEVEDVDAEEGKMRYSLSRSKVIPLPKWKANPITNPEAIFNKGSTVLALYPQTTCFYKAIVDEIPTHIHDEYSLYFEDSSYPEGYAPAIKIPQRYVI 276
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. TrEMBL
Match: G4VCX9 (SGF29 C-terminal domain-containing protein OS=Schistosoma mansoni OX=6183 GN=Smp_071880.1 PE=4 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.198e-70
Identity = 132/283 (46.64%), Postives = 188/283 (66.43%), Query Frame = 1 
Query:   67 KEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVI 915
            ++ ++K    EL+ LCK A       ++V   ++S + K+R  Q+    + S+LKS  T+ +S++  Q       L K+  IR +E  +++  G  + RRGV+MS+LQ++A+S+P+WIGKPG + P LCG+   S +     G  VAALVP+    +++ ++ +  E     ILAEV  Y+S K+IY VED+D EEGK ++ L   K+IPLPKWKA PI  P+A+F  G++VL LYPQTTCFY AIV E P+HIHD+YSL+FEDSSYPEGYAPA+KIPQ+YVI
Sbjct:   10 EQAQVKDRADELLSLCKKA---VADCNNVKTTLDSLD-KLRCKQRCSKVVKSQLKSLYTQAISEAEHQKATLMAALEKVSEIRAIEYKLRTHVGPKSFRRGVLMSVLQENAKSIPLWIGKPGESPPALCGATGPSPDIPADPGDHVAALVPE---PDVAAAACNLSE---GCILAEVVSYNSDKEIYEVEDVDAEEGKMRYSLSCSKVIPLPKWKANPITNPEAIFNKGSTVLALYPQTTCFYKAIVDEIPTHIHDEYSLYFEDSSYPEGYAPAIKIPQRYVI 282
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Cavefish
Match: sgf29 (SAGA complex associated factor 29 [Source:NCBI gene;Acc:103036506])

HSP 1 Score: 191.815 bits (486), Expect = 4.018e-57
Identity = 113/310 (36.45%), Postives = 172/310 (55.48%), Query Frame = 1 
Query:   52 MSVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQK----LPANIXXXXXXXXXXXXXXXXTQLE--LYQLVLNKIQVIRKVEEDIKSLQGMS-----------TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNT 930
            M++   + ++ + L+EL +L K    +R + +  L  +  T+E++++  K     P +   + K       + +  + E  + +  L+KI  I+ + E+ +    M+           T+RRGV+M++LQ SA +LP+WIGKPG + P LCG++P S + +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F     VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++   T
Sbjct:    1 MALVSADTKIAELLTELHQLIKQTQEERSRSEHNLLNIQKTHERMQTENKSQSTCPTSPYYRTKLRGLYTTAKADAEAECSILRHALDKIAEIKSLLEERRIAARMAGVYNDSDPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGESPPPLCGAIPASSDYVAKQGDKVAARV-----KGVDGDEQ--------WILAEVVSYSHSTNKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFSKDQLVLALYPQTTCFYRALIHTPPHRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVACKET 296
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Nematostella
Match: EDO47414 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLY8])

HSP 1 Score: 125.176 bits (313), Expect = 2.059e-33
Identity = 78/238 (32.77%), Postives = 115/238 (48.32%), Query Frame = 1 
Query:  265 TQLELYQLVLNKIQVIRKVEEDIKSLQG-MST-------------IRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVE--EGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNT 930
             + ++ +  L+KI +I+ +  D +S +G MS+             +RRGV+M+MLQ +A  LP+ IGK                                      S  S+  L   N+               Y V+DID E   GKE+  L   +++PLPK KA P  +P+A+FK    V+ LYPQTTCFY A + E P+   D YS+ FED+SY +G+AP L +PQ+YV+ +  T
Sbjct:   28 AEADIIRKTLDKIAIIKALRSDRRSARGGMSSGQGYQDTGEPRKAMRRGVLMTMLQQAASQLPMMIGK--------------------------------------SSESDISLASFNTPPCHR----------YDVDDIDEEGKNGKERHHLSRRRVVPLPKMKANPQTHPNALFKKDQVVMALYPQTTCFYKAWIHEPPTRPQDHYSVSFEDTSYADGFAPPLHVPQRYVVVVKET 217
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Medaka
Match: sgf29 (SAGA complex associated factor 29 [Source:NCBI gene;Acc:101172141])

HSP 1 Score: 196.438 bits (498), Expect = 5.660e-59
Identity = 119/300 (39.67%), Postives = 172/300 (57.33%), Query Frame = 1 
Query:   52 MSVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEED----IKSLQGMS-------TIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVIS 918
            MS   K  EL   L+EL +L K    +R + +  L  +  T+E++++  K      +KL+   T   +D+  +  + +  L+KI  I+ ++E+     KS +  S       T+RRGV+M++LQ SA +LP+WIGKPG + P LCG++P S + +   G KVAA V     K + G  +        WILAEV  YS     Y V+DID EEGKE+  L   +IIPLP+WKA P   P+A+F     VL LYPQTTCFY A++   P    DDYS+ FED+SY +GY+P L + Q+YV++
Sbjct:    1 MSADTKIAEL---LTELHQLIKQTQEERSRSEHNLLNIQKTHERMQTENKTSPYYRTKLRGLYTTAKADAEAECSILRHALDKIAEIKSLQEERRIAAKSARVQSDNDPPRKTMRRGVLMTLLQQSAMTLPLWIGKPGESPPPLCGAIPASSDYVAKQGDKVAARV-----KVVDGDEQ--------WILAEVVSYSHSTNKYEVDDID-EEGKERHTLSRRRIIPLPQWKANPETDPEALFSKDQLVLALYPQTTCFYRALIHTPPHRPQDDYSVLFEDTSYADGYSPPLNVAQRYVVA 283
[Close]
BLAST of SGF29 C-terminal domain-containing protein vs. Planmine SMEST
Match: SMESG000035119.1 (SMESG000035119.1)

HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 1 
Query:   52 MSVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNTMQAALSID 954
            MSVSVKEIELKKHLSELVELCKNADIKR KGDDVLEFVNSTNEKIRSGQKLPANILSKLKSNSTKLLSDSSTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNTMQAALSID
Sbjct:    1 MSVSVKEIELKKHLSELVELCKNADIKRQKGDDVLEFVNSTNEKIRSGQKLPANILSKLKSNSTKLLSDSSTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTKVAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVEEGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAAIVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNTMQAALSID 301
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BLAST of SGF29 C-terminal domain-containing protein vs. Planmine SMEST
Match: SMESG000045951.1 (SMESG000045951.1)

HSP 1 Score: 164.466 bits (415), Expect = 8.361e-47
Identity = 100/123 (81.30%), Postives = 108/123 (87.80%), Query Frame = 1 
Query:   70 EIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGVMMSMLQDSARSLPVWIGKPGMN 438
            ++ LK      ++LCKN DIKR KGD+ LEFVNSTNEKIRSG+KLPA ILSKLKS+STKLLSDSST+LELYQLVLNKIQVIRKV EDIKSLQGMS IR  VMMSMLQDSARSLPVWIGKPGMN
Sbjct:    2 KLNLKSIYRNWLKLCKNTDIKRQKGDEFLEFVNSTNEKIRSGEKLPAKILSKLKSDSTKLLSDSSTELELYQLVLNKIQVIRKVGEDIKSLQGMSAIRIEVMMSMLQDSARSLPVWIGKPGMN 124
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BLAST of SGF29 C-terminal domain-containing protein vs. Planmine SMEST
Match: SMESG000029653.1 (SMESG000029653.1)

HSP 1 Score: 118.242 bits (295), Expect = 1.348e-31
Identity = 85/118 (72.03%), Postives = 92/118 (77.97%), Query Frame = 1 
Query:   64 VKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQKLPANIXXXXXXXXXXXXXXXXTQLELYQLVLNKIQVIRKVEEDIKSLQGMSTIRRGV--MMSMLQDSARSLP 411
            + EIELKKHLSELVELCKNADIK  KGDDVLEFVNSTNEKIRSGQKLPANIL KLKSNSTKLLSDSSTQLELYQLVLNKIQ      E I S++    +   +  M+  LQ+S  SL 
Sbjct:    1 MNEIELKKHLSELVELCKNADIKLQKGDDVLEFVNSTNEKIRSGQKLPANILGKLKSNSTKLLSDSSTQLELYQLVLNKIQ-----SEFIVSMRQCQALINALIEMLKYLQNSTISLS 113
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BLAST of SGF29 C-terminal domain-containing protein vs. Planmine SMEST
Match: SMESG000074552.1 (SMESG000074552.1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.026e-9
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 1 
Query:  349 MSTIRRGVMMSMLQDSARSLPVWIGKPGMN 438
            MSTI  GVMMSMLQDSARSLPVWI KPGMN
Sbjct:    1 MSTICIGVMMSMLQDSARSLPVWIEKPGMN 30
The following BLAST results are available for this feature:
BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
SGF292.694e-5839.72SAGA complex associated factor 29 [Source:HGNC Sym... [more]
SGF293.673e-1650.00SAGA complex associated factor 29 [Source:HGNC Sym... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Y17G9B.81.160e-2429.44pep chromosome:WBcel235:IV:4757179:4758840:-1 gene... [more]
T22B7.41.474e-1330.00pep chromosome:WBcel235:X:5638582:5641363:-1 gene:... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Sgf291.071e-4440.18gene:FBgn0050390 transcript:FBtr0342888[more]
Sgf291.071e-4440.18gene:FBgn0050390 transcript:FBtr0071617[more]
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
sgf291.206e-5737.33SAGA complex associated factor 29 [Source:ZFIN;Acc... [more]
sgf291.206e-5737.33SAGA complex associated factor 29 [Source:ZFIN;Acc... [more]
sgf292.168e-5448.40SAGA complex associated factor 29 [Source:ZFIN;Acc... [more]
sgf291.094e-2533.04SAGA complex associated factor 29 [Source:ZFIN;Acc... [more]
sgf295.533e-1630.72SAGA complex associated factor 29 [Source:ZFIN;Acc... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
pusl18.396e-5548.94pseudouridine synthase like 1 [Source:Xenbase;Acc:... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Sgf291.065e-5840.07SAGA complex associated factor 29 [Source:MGI Symb... [more]
Sgf293.780e-4247.62SAGA complex associated factor 29 [Source:MGI Symb... [more]
Sgf293.012e-932.37SAGA complex associated factor 29 [Source:MGI Symb... [more]
Sgf296.508e-832.00SAGA complex associated factor 29 [Source:MGI Symb... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 4
Match NameE-valueIdentityDescription
sp|P0C606|SGF29_RAT7.217e-5840.07SAGA-associated factor 29 OS=Rattus norvegicus OX=... [more]
sp|Q9DA08|SGF29_MOUSE7.450e-5840.07SAGA-associated factor 29 OS=Mus musculus OX=10090... [more]
sp|Q96ES7|SGF29_HUMAN1.294e-5739.72SAGA-associated factor 29 OS=Homo sapiens OX=9606 ... [more]
sp|Q5ZL38|SGF29_CHICK2.984e-5638.14SAGA-associated factor 29 OS=Gallus gallus OX=9031... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4E0R1486.896e-7341.48SAGA-associated factor OS=Fasciola hepatica OX=619... [more]
A0A0X3PTJ93.775e-7246.02SGF29 C-terminal domain-containing protein OS=Schi... [more]
A0A4S2LXD72.412e-7141.81SGF29 C-terminal domain-containing protein OS=Opis... [more]
A0A183R0G91.017e-7046.64SGF29 C-terminal domain-containing protein OS=Schi... [more]
G4VCX91.198e-7046.64SGF29 C-terminal domain-containing protein OS=Schi... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
sgf294.018e-5736.45SAGA complex associated factor 29 [Source:NCBI gen... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO474142.059e-3332.77Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
sgf295.660e-5939.67SAGA complex associated factor 29 [Source:NCBI gen... [more]
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BLAST of SGF29 C-terminal domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000035119.10.000e+099.67SMESG000035119.1[more]
SMESG000045951.18.361e-4781.30SMESG000045951.1[more]
SMESG000029653.11.348e-3172.03SMESG000029653.1[more]
SMESG000074552.11.026e-990.00SMESG000074552.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30031292 ID=SMED30031292|Name=SGF29 C-terminal domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1411bp
ATGATAATTGCTACTTACCTGATTTGTTTAAATAATTAATTAATTTTATA
AATGAGTGTCTCTGTAAAAGAAATTGAACTTAAAAAGCATTTGTCGGAAT
TGGTTGAATTATGTAAAAATGCTGATATAAAGCGTCTAAAAGGTGATGAT
GTTTTGGAATTTGTGAATTCTACGAATGAAAAGATTCGATCTGGACAAAA
ATTGCCGGCAAACATTTTAAGTAAATTAAAATCCAATTCCACAAAATTAC
TATCAGATTCATCAACTCAGCTTGAGTTGTATCAATTGGTGCTGAATAAA
ATTCAAGTTATTCGTAAAGTTGAGGAAGATATAAAATCATTACAAGGTAT
GTCAACTATTCGCAGAGGAGTAATGATGTCCATGCTACAAGATAGCGCCA
GATCCTTACCAGTATGGATTGGAAAACCAGGAATGAATGTACCGGGGCTT
TGTGGATCAGTTCCAATATCTGGCAATGAAATTCTAACTAGCGGCACAAA
AGTCGCTGCATTAGTCCCCGATAATACAAACAAAAATATATCAGGCTCCA
GTGAAGATCAATTGGAAGAAGTTAACAGTTGGATTCTAGCTGAAGTTAAG
GAATATAGTTCTCTCAAAAAAATCTATATCGTAGAAGATATTGATGTGGA
AGAAGGCAAAGAGAAATTTGATTTGGATCTAGGCAAAATTATTCCGTTAC
CAAAGTGGAAAGCTTATCCGATATGTTATCCAGATGCGGTGTTCAAACCC
GGAACGTCGGTCCTTGGATTATATCCGCAAACTACTTGTTTTTACGCCGC
TATCGTTCGAGAATCTCCTTCGCATATTCACGATGATTACAGCTTATTCT
TTGAAGACAGTTCTTACCCGGAAGGATACGCTCCAGCACTTAAAATTCCC
CAGAAGTACGTCATATCAATCAATAACACAATGCAAGCAGCGTTGTCCAT
TGATTGATCTTTCCGCAGAAGCTAATCCAAATATTGATTTTTTTGTGTAA
TAAATAGAGTCGTCGTTGTTTTATTAAACAAATAATTTTTACAATAACAA
AGTGTTTTGATTGGTTCATCGATTTATAAGTGATTAAAATAACAAATCAA
TAAAGTTAAACCAGGTCGTTCTTAATTAATAAGTACAAATTAAATGGAGA
AATCAAACAACAAATTGGAAATGGAATTATTTTATCTTAACAACTTGGTC
AAACCACTTTTCAAGTTGGGAGAATAAAAAAGCGAAAAGAATTTCGTGTT
TTGTCAGTTGCTGGTAGATGGGGAACGAAAACAAAATGGAAGTTATAGTA
AATGTCAGAAAATAACAGATCAATTGAGACAAGTCTTGAAAATACTTTTA
GAAAACAAATAGAGGATCCAAATCTATATTTTGTATGCATTAAACTTTCC
ATGTTTCTTGA
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protein sequence of SMED30031292-orf-1

>SMED30031292-orf-1 ID=SMED30031292-orf-1|Name=SMED30031292-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=302bp
MSVSVKEIELKKHLSELVELCKNADIKRLKGDDVLEFVNSTNEKIRSGQK
LPANILSKLKSNSTKLLSDSSTQLELYQLVLNKIQVIRKVEEDIKSLQGM
STIRRGVMMSMLQDSARSLPVWIGKPGMNVPGLCGSVPISGNEILTSGTK
VAALVPDNTNKNISGSSEDQLEEVNSWILAEVKEYSSLKKIYIVEDIDVE
EGKEKFDLDLGKIIPLPKWKAYPICYPDAVFKPGTSVLGLYPQTTCFYAA
IVRESPSHIHDDYSLFFEDSSYPEGYAPALKIPQKYVISINNTMQAALSI
D*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0000124SAGA complex
GO:0005634nucleus
GO:0005671Ada2/Gcn5/Ada3 transcription activator complex
GO:0070461SAGA-type complex
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR037802SGF29
IPR010750SGF29_tudor-like_dom
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0019899enzyme binding
GO:0035064methylated histone binding
GO:0047485protein N-terminus binding
Vocabulary: biological process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO:0016569covalent chromatin modification
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.30.30.140coord: 221..295
e-value: 1.2E-26
score: 94.5
NoneNo IPR availableGENE3DG3DSA:2.30.30.140coord: 165..220
e-value: 1.1E-14
score: 56.1
NoneNo IPR availablePANTHERPTHR21539:SF3SAGA-ASSOCIATED FACTOR 29coord: 10..291
IPR010750SGF29 tudor-like domainPFAMPF07039DUF1325coord: 148..290
e-value: 1.2E-29
score: 103.1
IPR010750SGF29 tudor-like domainPROSITEPS51518SGF29_Ccoord: 141..296
score: 38.397
IPR037802SAGA-associated factor 29PANTHERPTHR21539UNCHARACTERIZEDcoord: 10..291