Protein SMG7-like Protein

Overview
NameProtein SMG7-like Protein
Smed IDSMED30031288
Length (bp)3716
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Protein SMG7-like Protein (SMED30031288) t-SNE clustered cells

Violin plots show distribution of expression levels for Protein SMG7-like Protein (SMED30031288) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Protein SMG7-like Protein (SMED30031288) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Protein SMG7-like Protein (SMED30031288) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30031288

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
posterior sideSMED30031288h1SMcG0007724 dd_Smed_v4_5674_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
posterior muscle cellSMED30031288h1SMcG0007724 dd_Smed_v4_5674_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Human
Match: SMG7 (SMG7 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792])

HSP 1 Score: 142.895 bits (359), Expect = 1.193e-33
Identity = 94/301 (31.23%), Postives = 153/301 (50.83%), Query Frame = 3 
Query:  171 TENSNFTNNLERTNTILAQFVSASEFSKKL------ILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            TEN     +L+ +N   A+ + A     KL        RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   24 TENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 305
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Human
Match: SMG7 (SMG7 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792])

HSP 1 Score: 140.584 bits (353), Expect = 5.233e-33
Identity = 85/263 (32.32%), Postives = 139/263 (52.85%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 276
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Human
Match: SMG7 (SMG7 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792])

HSP 1 Score: 140.584 bits (353), Expect = 5.704e-33
Identity = 85/263 (32.32%), Postives = 139/263 (52.85%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 276
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Human
Match: SMG7 (SMG7 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792])

HSP 1 Score: 140.584 bits (353), Expect = 6.697e-33
Identity = 85/263 (32.32%), Postives = 139/263 (52.85%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 276
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Human
Match: SMG7 (SMG7 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792])

HSP 1 Score: 135.576 bits (340), Expect = 1.089e-31
Identity = 81/248 (32.66%), Postives = 131/248 (52.82%), Query Frame = 3 
Query:  312 LKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:    6 LEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 234
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Zebrafish
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122])

HSP 1 Score: 132.88 bits (333), Expect = 9.480e-31
Identity = 85/263 (32.32%), Postives = 134/263 (50.95%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQ + K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN QS  +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S + +     +     A+I  +G++ +  S+ +   L++++
Sbjct:   32 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQSSTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESRDEVKTKWSVSDFIKAFIKFHGHVYLCKSLDKLNTLREKL 275
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Zebrafish
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122])

HSP 1 Score: 132.88 bits (333), Expect = 1.013e-30
Identity = 85/263 (32.32%), Postives = 134/263 (50.95%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQ + K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN QS  +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S + +     +     A+I  +G++ +  S+ +   L++++
Sbjct:   32 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQSSTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESRDEVKTKWSVSDFIKAFIKFHGHVYLCKSLDKLNTLREKL 275
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Xenopus
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:394870])

HSP 1 Score: 139.813 bits (351), Expect = 9.325e-33
Identity = 85/263 (32.32%), Postives = 137/263 (52.09%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q H             YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S   + +   +     A+I  +G++ +  S+++   L++++
Sbjct:   32 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRTNPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQMHSGTVVKPQSSSCAYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESREEVKNRWGVSDFIKAFIKFHGHVYLTKSLEKVSTLREQL 275
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Xenopus
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:394870])

HSP 1 Score: 139.428 bits (350), Expect = 1.368e-32
Identity = 86/263 (32.70%), Postives = 135/263 (51.33%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q H             YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S   + +   +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRTNPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQMHSGTVVKPQSSSCAYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESREEVKNRWGVSDFIKAFIKFHGHVYLTKSLEKVSTLREQL 276
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Xenopus
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:394870])

HSP 1 Score: 139.043 bits (349), Expect = 1.566e-32
Identity = 86/263 (32.70%), Postives = 135/263 (51.33%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q H             YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S   + +   +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRTNPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQMHSGTVVKPQSSSCAYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESREEVKNRWGVSDFIKAFIKFHGHVYLTKSLEKVSTLREQL 276
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Xenopus
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:394870])

HSP 1 Score: 139.043 bits (349), Expect = 1.590e-32
Identity = 86/263 (32.70%), Postives = 135/263 (51.33%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q H             YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S   + +   +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRTNPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQMHSGTVVKPQSSSCAYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESREEVKNRWGVSDFIKAFIKFHGHVYLTKSLEKVSTLREQL 276
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Xenopus
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:394870])

HSP 1 Score: 139.043 bits (349), Expect = 1.600e-32
Identity = 85/263 (32.32%), Postives = 137/263 (52.09%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q H             YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S   + +   +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRTNPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQMHSGTVVKPQSSSCAYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESREEVKNRWGVSDFIKAFIKFHGHVYLTKSLEKVSTLREQL 276
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Mouse
Match: Smg7 (Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334])

HSP 1 Score: 142.51 bits (358), Expect = 1.225e-33
Identity = 94/301 (31.23%), Postives = 153/301 (50.83%), Query Frame = 3 
Query:  171 TENSNFTNNLERTNTILAQFVSASEFSKKL------ILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            TEN     +L+ +N   A+ + A     KL        RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:    3 TENLKSEEHLKSSNIRQAEVLKAEMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 284
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Mouse
Match: Smg7 (Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334])

HSP 1 Score: 140.584 bits (353), Expect = 4.772e-33
Identity = 85/263 (32.32%), Postives = 139/263 (52.85%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 276
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Mouse
Match: Smg7 (Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334])

HSP 1 Score: 140.198 bits (352), Expect = 5.638e-33
Identity = 86/263 (32.70%), Postives = 137/263 (52.09%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 276
[Close]
BLAST of Protein SMG7-like Protein vs. UniProt/SwissProt
Match: sp|Q92540|SMG7_HUMAN (Protein SMG7 OS=Homo sapiens OX=9606 GN=SMG7 PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 2.739e-32
Identity = 85/263 (32.32%), Postives = 139/263 (52.85%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 276
[Close]
BLAST of Protein SMG7-like Protein vs. UniProt/SwissProt
Match: sp|Q5RJH6|SMG7_MOUSE (Protein SMG7 OS=Mus musculus OX=10090 GN=Smg7 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.338e-32
Identity = 85/263 (32.32%), Postives = 139/263 (52.85%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHSSTIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDELKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 276
[Close]
BLAST of Protein SMG7-like Protein vs. UniProt/SwissProt
Match: sp|Q9FZ99|SMG7L_ARATH (Protein SMG7L OS=Arabidopsis thaliana OX=3702 GN=SMG7L PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.867e-6
Identity = 64/238 (26.89%), Postives = 104/238 (43.70%), Query Frame = 3 
Query:  255 KLILRQELEESYFSLTMYY---LKDTVKHKIEQDMWNNLFK---KNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPGSDNLGKSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYH----------NLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLL---RHINEQSVST 911
            K IL  ++ E Y      Y    K  ++H+  Q++   L+K   K+I + +  +K+ D ++  +A     +FL +A  FY   I  +   +                 HR L E + E+  R++   FY+ +GDL RY           N +  A +Y E A +  P SG+ +NQLA+L  A+ V   + +    H +R++ + E       PFP    NL  L    R    QS+ST
Sbjct:   32 KTILHTDVSELYAKAGSTYEQIFKSNLQHEELQEVEFCLWKLHYKHIDEFRKGLKTNDHAKHMKA---FKLFLSKAAEFYQNLISKVRGYY-----------------HR-LSEESGEQKSRFLCHRFYICLGDLQRYQEQYLKAHEHPNWSTAATYYLE-AAKSWPDSGNPHNQLAVL--ATYVSDELLA--LYHCVRSLAVKE-------PFPGASNNLLLLFEKNRSSPLQSLST 236
[Close]
BLAST of Protein SMG7-like Protein vs. TrEMBL
Match: A0A0P6JV93 (Protein SMG7 isoform 1 OS=Heterocephalus glaber OX=10181 GN=SMG7 PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.812e-31
Identity = 94/301 (31.23%), Postives = 154/301 (51.16%), Query Frame = 3 
Query:  171 TENSNFTNNLERTNTILAQFVSASEFSKKL------ILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            TEN     +L+ +N   A+ + A     KL        RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++ + L++++
Sbjct:   24 TENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVRSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWSVSDFIRAFIKFHGHVYLSKSLEKLRPLREKL 305
[Close]
BLAST of Protein SMG7-like Protein vs. TrEMBL
Match: B4DLY0 (cDNA FLJ55570, highly similar to Protein SMG7 (Fragment) OS=Homo sapiens OX=9606 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 9.200e-31
Identity = 94/301 (31.23%), Postives = 153/301 (50.83%), Query Frame = 3 
Query:  171 TENSNFTNNLERTNTILAQFVSASEFSKKL------ILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            TEN     +L+ +N   A+ + A     KL        RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   24 TENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 305
[Close]
BLAST of Protein SMG7-like Protein vs. TrEMBL
Match: A0A2K5DI61 (SMG7 nonsense mediated mRNA decay factor OS=Aotus nancymaae OX=37293 GN=SMG7 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.655e-30
Identity = 94/301 (31.23%), Postives = 153/301 (50.83%), Query Frame = 3 
Query:  171 TENSNFTNNLERTNTILAQFVSASEFSKKL------ILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            TEN     +L+ +N   A+ + A     KL        RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   24 TENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 305
[Close]
BLAST of Protein SMG7-like Protein vs. TrEMBL
Match: A0A286XMC4 (SMG7 nonsense mediated mRNA decay factor OS=Cavia porcellus OX=10141 GN=SMG7 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.690e-30
Identity = 94/301 (31.23%), Postives = 153/301 (50.83%), Query Frame = 3 
Query:  171 TENSNFTNNLERTNTILAQFVSASEFSKKL------ILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            TEN     +L+ +N   A+ + A     KL        RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   20 TENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 301
[Close]
BLAST of Protein SMG7-like Protein vs. TrEMBL
Match: E9PD50 (Protein SMG7 OS=Homo sapiens OX=9606 GN=SMG7 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.698e-30
Identity = 94/301 (31.23%), Postives = 153/301 (50.83%), Query Frame = 3 
Query:  171 TENSNFTNNLERTNTILAQFVSASEFSKKL------ILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLGK-SNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            TEN     +L+ +N   A+ + A     KL        RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQG+ K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q+H +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   24 TENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKL 305
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Cavefish
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:103037658])

HSP 1 Score: 134.806 bits (338), Expect = 1.800e-31
Identity = 85/263 (32.32%), Postives = 135/263 (51.33%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQ + K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN QS  +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   32 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITSLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQSSTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESRDEVKTKWSVSDFIKAFIKFHGHVYLSKSLEKLNALREKL 275
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Cavefish
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:103037658])

HSP 1 Score: 134.806 bits (338), Expect = 2.022e-31
Identity = 85/263 (32.32%), Postives = 135/263 (51.33%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQ + K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN QS  +           YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   32 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITSLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQSSTSAIVKPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESRDEVKTKWSVSDFIKAFIKFHGHVYLSKSLEKLNALREKL 275
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Cavefish
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:103037658])

HSP 1 Score: 100.138 bits (248), Expect = 1.014e-20
Identity = 76/263 (28.90%), Postives = 123/263 (46.77%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQ + K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN QS  +           YI Q                 QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S + +     +     A+I  +G++ +  S+++   L++++
Sbjct:   33 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITSLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQSSTSAIVKPQPSSCSYICQCVCF------------LQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESRDEVKTKWSVSDFIKAFIKFHGHVYLSKSLEKLNALREKL 264
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Cavefish
Match: smg6 (SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52])

HSP 1 Score: 51.6026 bits (122), Expect = 5.772e-6
Identity = 40/191 (20.94%), Postives = 85/191 (44.50%), Query Frame = 3 
Query:  189 TNNLERTNTILAQFVSASEFSKKLILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPGSDNLGKSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTK------QAKFYYELAVQLNPSSGHAYNQLAIL 743
            +  L+ +N +  + +S     +   LR EL   Y  + +  ++ +    ++Q +W N+F + I   +  +K +D   + + ++ +   L+E   F+   +  +  +   +L   D +    +++ R L +      I    Q   +  GD++RY           +A+ +Y  A Q+ P +G  YNQLA+L
Sbjct:  554 SQELQLSNLLSRERLSPEGLDRMAQLRAELLTLYERVILTDIEFSDSQNLDQALWKNVFYQVIERFRQLLKDQDSDTAPQLRAMLLTILEEGAMFFDTLLQKLQTIFQFKL--EDYMDGMAIRA-RPLRKTVKYALIS--AQRCMICQGDIARYREQASDSANYGKARSWYLKAQQIAPKNGRPYNQLALL 739
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Nematostella
Match: EDO34379 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SPJ8])

HSP 1 Score: 106.686 bits (265), Expect = 8.790e-24
Identity = 97/393 (24.68%), Postives = 178/393 (45.29%), Query Frame = 3 
Query:  222 AQFVSASEFSKKLILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPG---SDNLGKSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVY----GNLKMGHSIQRCKQLQQRIIDW-----------ACELVKNSSMCKNCWRDLAAMTALHCXXXXXXXXXXXXXXNK----VWSTNINLFSQDFINAICRGLVSLSHDNKLLE-LLLSQPGCVSIIIIFLSWI 1331
            AQ +  +E  +  +  Q L++ Y  + +  L+  +  KIEQD+WN+ FK  I  L+ K + K  +  +  Q+ +++FL+ A GFY + +  + + +++ LPG   S +LG  +     +  +    +   Y+ Q   VH+GD++RY +   QA+ +Y  A+ L PS+G  YNQLAIL SA   H           + TV  Y  + + +  FPA   NL     H     +S+   +++S   +  I      +IH++      + +   +   K+LQ R+++            + ELV+  ++C          T  H     +   +     +K     W   + L  + FI ++C  +  L  D++  +  LL+ P    +I +F  W+
Sbjct:    9 AQVLRQAETIRAGLKTQRLQDLYKRILLNDLELALDKKIEQDLWNSAFKSQIDFLRQKARDKKCTSKNEVQAVLTLFLETASGFYIQLLQELCMTYDLDLPGHARSSHLGLLDDGDVNSSSKRPHTQSCYYVCQDCLVHLGDIARYCDDATQAEVFYRHALVLVPSNGQPYNQLAILASARGDH-----------LGTVYFYCRSIAVKNQFPAASTNL-----HKTFNKISSCHNTHSSSLSMGAISKA--EFIHLFLQFHSAIYLVQDLSEAKKLQIRLVEEFKVVLRQNLLSSGELVRLLTIC--------LFTLFHIRTGGAEELEEFDCISKDEEESWIMGLELTVEMFIASVCWAIDHLQEDDQPRDNSLLTLP----LISVFCQWV 371
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Medaka
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:101155720])

HSP 1 Score: 134.42 bits (337), Expect = 2.677e-31
Identity = 84/263 (31.94%), Postives = 135/263 (51.33%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQ + K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q               YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL        ++++S  L S + +     +     A+I  +G++ +  S+++   L+Q++
Sbjct:   32 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVRSSQLGIISNKQGSGGAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNL--------QKALSKALESRDELKSKWSVSDFIKAFIKFHGHVYLTRSVEQLDALRQKL 275
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Medaka
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:101155720])

HSP 1 Score: 134.42 bits (337), Expect = 2.748e-31
Identity = 85/263 (32.32%), Postives = 133/263 (50.57%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQ + K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q               YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S + +     +     A+I  +G++ +  S+++   L+Q++
Sbjct:   32 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVRSSQLGIISNKQGSGGAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESRDELKSKWSVSDFIKAFIKFHGHVYLTRSVEQLDALRQKL 275
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Medaka
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:101155720])

HSP 1 Score: 134.035 bits (336), Expect = 2.853e-31
Identity = 85/263 (32.32%), Postives = 133/263 (50.57%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRI 1043
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQ + K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q               YI QH  VH+GD++RY N T QA+ YY  A QL PS+G  YNQLAIL S+   H           + T+  Y  + + + PFPA   NL+  L        S  L S + +     +     A+I  +G++ +  S+++   L+Q++
Sbjct:   32 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVRSSQLGIISNKQGSGGAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDH-----------LTTIFYYCRSIAVKFPFPAASTNLQKAL--------SKALESRDELKSKWSVSDFIKAFIKFHGHVYLTRSVEQLDALRQKL 275
[Close]
BLAST of Protein SMG7-like Protein vs. Ensembl Medaka
Match: smg7 (SMG7 nonsense mediated mRNA decay factor [Source:NCBI gene;Acc:101155720])

HSP 1 Score: 78.1814 bits (191), Expect = 1.133e-15
Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 3 
Query:  267 RQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLP---GSDNLG-KSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLS 644
            RQ L++ Y  + +  L+  +  K+EQD+WN+ FK  I+ LQ + K++     S  Q+ +S+FL+ A GFY++ +  +  V N+ LP    S  LG  SN Q               YI QH  VH+GD+ 
Sbjct:   71 RQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVRSSQLGIISNKQGSGGAIVTPQPSSCSYICQHCLVHLGDIG 200
[Close]
BLAST of Protein SMG7-like Protein vs. Planmine SMEST
Match: SMESG000071698.1 (SMESG000071698.1)

HSP 1 Score: 1915.58 bits (4961), Expect = 0.000e+0
Identity = 1044/1045 (99.90%), Postives = 1044/1045 (99.90%), Query Frame = 3 
Query:  108 MTLYKLPRGLLEIPKGTNTSGTENSNFTNNLERTNTILAQFVSASEFSKKLILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPGSDNLGKSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRIIDWACELVKNSSMCKNCWRDLAAMTALHCXXXXXXXXXXXXXXNKVWSTNINLFSQDFINAICRGLVSLSHDNKLLELLLSQPGCVSIIIIFLSWINQYFNDNLNDTXXXXXXXXXXXXXXFIPLKYPFGEEFVKFINILAVRKTTNTDTTGHMKLPTHLPELSFLTGFQPLKVPYKIYDIYSHDKPITNENIEINEMDIRISFIVSVCKRLALKWPNLLVFDNTNNRFSXXXXXXXXXXXXXXXXEPSIANRKPVNVALASMKNNNTKPNGFVGQNIPSKVLADGLAAVGEPSKGIITDVKIAKCIQEQIAQDIKSSTTVDNNKSLTVKAKEDSYVIAPAPGLILSSNLPPDFKSISSTSASTQLTDNNLSYSPGTESIVQHHDQSDHNKINQLTSKSNHSYNPNREQFEKDLPPRFANKRSYSQEISTIGSINEQPRSYFDQHQQNKGGFLSMNYWDSINDYPNSNSQNQFDTNLTKKESEILLPPTVPTSWLTDNNSYDHKMDSTSISNSQLQQFPFGSNLMHSQAGGHTFAGLNNQSPQNHINLIXXXXXXXXXXXXXXXXXXXXGLNKDQENQLQYLLQSVTTNANAPRFRSQTDSLLPAQMNFDNQISSFMNNTRMPSTKFPSIPPPTQQLPSVSGINSHLAMXXXXXXXXXNYDSSYQMTTRPNFYDKPVFSTSNQSAGFSGGGYNSGSIMAXXXXXXXXXXXXXXXXXXXXXXXXXXGFLNEAQR 3242
            MTLYKLPRGLLEIPKGTNTSGTENSNFTNNLERTNTILAQFVSASEFSKKLILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPGSDNLGKSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRIIDWACELVKNSSMCKNCWRDLAAMTALHCSLISSSASQADAIDNKVWSTNINLFSQDFINAICRGLVSLSHDNKLLELLLSQPGCVSIIIIFLSWINQYFNDNLNDTSVSSNGGGGVSNGS IPLKYPFGEEFVKFINILAVRKTTNTDTTGHMKLPTHLPELSFLTGFQPLKVPYKIYDIYSHDKPITNENIEINEMDIRISFIVSVCKRLALKWPNLLVFDNTNNRFSIVPIPDPIPVKKYVKIEPSIANRKPVNVALASMKNNNTKPNGFVGQNIPSKVLADGLAAVGEPSKGIITDVKIAKCIQEQIAQDIKSSTTVDNNKSLTVKAKEDSYVIAPAPGLILSSNLPPDFKSISSTSASTQLTDNNLSYSPGTESIVQHHDQSDHNKINQLTSKSNHSYNPNREQFEKDLPPRFANKRSYSQEISTIGSINEQPRSYFDQHQQNKGGFLSMNYWDSINDYPNSNSQNQFDTNLTKKESEILLPPTVPTSWLTDNNSYDHKMDSTSISNSQLQQFPFGSNLMHSQAGGHTFAGLNNQSPQNHINLIQQYSNQFNQSQQPPLPPPSSGLNKDQENQLQYLLQSVTTNANAPRFRSQTDSLLPAQMNFDNQISSFMNNTRMPSTKFPSIPPPTQQLPSVSGINSHLAMQQQQQQQQQNYDSSYQMTTRPNFYDKPVFSTSNQSAGFSGGGYNSGSIMAQQQQHNHHHHHNQVRHNNPLLNLLPPGFLNEAQR
Sbjct:    1 MTLYKLPRGLLEIPKGTNTSGTENSNFTNNLERTNTILAQFVSASEFSKKLILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPGSDNLGKSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRIIDWACELVKNSSMCKNCWRDLAAMTALHCSLISSSASQADAIDNKVWSTNINLFSQDFINAICRGLVSLSHDNKLLELLLSQPGCVSIIIIFLSWINQYFNDNLNDTSVSSNGGGGVSNGSSIPLKYPFGEEFVKFINILAVRKTTNTDTTGHMKLPTHLPELSFLTGFQPLKVPYKIYDIYSHDKPITNENIEINEMDIRISFIVSVCKRLALKWPNLLVFDNTNNRFSIVPIPDPIPVKKYVKIEPSIANRKPVNVALASMKNNNTKPNGFVGQNIPSKVLADGLAAVGEPSKGIITDVKIAKCIQEQIAQDIKSSTTVDNNKSLTVKAKEDSYVIAPAPGLILSSNLPPDFKSISSTSASTQLTDNNLSYSPGTESIVQHHDQSDHNKINQLTSKSNHSYNPNREQFEKDLPPRFANKRSYSQEISTIGSINEQPRSYFDQHQQNKGGFLSMNYWDSINDYPNSNSQNQFDTNLTKKESEILLPPTVPTSWLTDNNSYDHKMDSTSISNSQLQQFPFGSNLMHSQAGGHTFAGLNNQSPQNHINLIQQYSNQFNQSQQPPLPPPSSGLNKDQENQLQYLLQSVTTNANAPRFRSQTDSLLPAQMNFDNQISSFMNNTRMPSTKFPSIPPPTQQLPSVSGINSHLAMQQQQQQQQQNYDSSYQMTTRPNFYDKPVFSTSNQSAGFSGGGYNSGSIMAQQQQHNHHHHHNQVRHNNPLLNLLPPGFLNEAQR 1045
[Close]
BLAST of Protein SMG7-like Protein vs. Planmine SMEST
Match: SMESG000071698.1 (SMESG000071698.1)

HSP 1 Score: 1876.68 bits (4860), Expect = 0.000e+0
Identity = 1028/1045 (98.37%), Postives = 1029/1045 (98.47%), Query Frame = 3 
Query:  108 MTLYKLPRGLLEIPKGTNTSGTENSNFTNNLERTNTILAQFVSASEFSKKLILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPGSDNLGKSNLQSHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRIIDWACELVKNSSMCKNCWRDLAAMTALHCXXXXXXXXXXXXXXNKVWSTNINLFSQDFINAICRGLVSLSHDNKLLELLLSQPGCVSIIIIFLSWINQYFNDNLNDTXXXXXXXXXXXXXXFIPLKYPFGEEFVKFINILAVRKTTNTDTTGHMKLPTHLPELSFLTGFQPLKVPYKIYDIYSHDKPITNENIEINEMDIRISFIVSVCKRLALKWPNLLVFDNTNNRFSXXXXXXXXXXXXXXXXEPSIANRKPVNVALASMKNNNTKPNGFVGQNIPSKVLADGLAAVGEPSKGIITDVKIAKCIQEQIAQDIKSSTTVDNNKSLTVKAKEDSYVIAPAPGLILSSNLPPDFKSISSTSASTQLTDNNLSYSPGTESIVQHHDQSDHNKINQLTSKSNHSYNPNREQFEKDLPPRFANKRSYSQEISTIGSINEQPRSYFDQHQQNKGGFLSMNYWDSINDYPNSNSQNQFDTNLTKKESEILLPPTVPTSWLTDNNSYDHKMDSTSISNSQLQQFPFGSNLMHSQAGGHTFAGLNNQSPQNHINLIXXXXXXXXXXXXXXXXXXXXGLNKDQENQLQYLLQSVTTNANAPRFRSQTDSLLPAQMNFDNQISSFMNNTRMPSTKFPSIPPPTQQLPSVSGINSHLAMXXXXXXXXXNYDSSYQMTTRPNFYDKPVFSTSNQSAGFSGGGYNSGSIMAXXXXXXXXXXXXXXXXXXXXXXXXXXGFLNEAQR 3242
            MTLYKLPRGLLEIPKGTNTSGTENSNFTNNLERTNTILAQFVSASEFSKKLILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPG               +EAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRIIDWACELVKNSSMCKNCWRDLAAMTALHCSLISSSASQADAIDNKVWSTNINLFSQDFINAICRGLVSLSHDNKLLELLLSQPGCVSIIIIFLSWINQYFNDNLNDTSVSSNGGGGVSNGS IPLKYPFGEEFVKFINILAVRKTTNTDTTGHMKLPTHLPELSFLTGFQPLKVPYKIYDIYSHDKPITNENIEINEMDIRISFIVSVCKRLALKWPNLLVFDNTNNRFSIVPIPDPIPVKKYVKIEPSIANRKPVNVALASMKNNNTKPNGFVGQNIPSKVLADGLAAVGEPSKGIITDVKIAKCIQEQIAQDIKSSTTVDNNKSLTVKAKEDSYVIAPAPGLILSSNLPPDFKSISSTSASTQLTDNNLSYSPGTESIVQHHDQSDHNKINQLTSKSNHSYNPNREQFEKDLPPRFANKRSYSQEISTIGSINEQPRSYFDQHQQNKGGFLSMNYWDSINDYPNSNSQNQFDTNLTKKESEILLPPTVPTSWLTDNNSYDHKMDSTSISNSQLQQFPFGSNLMHSQAGGHTFAGLNNQSPQNHINLIQQYSNQFNQSQQPPLPPPSSGLNKDQENQLQYLLQSVTTNANAPRFRSQTDSLLPAQMNFDNQISSFMNNTRMPSTKFPSIPPPTQQLPSVSGINSHLAMQQQQQQQQQNYDSSYQMTTRPNFYDKPVFSTSNQSAGFSGGGYNSGSIMAQQQQHNHHHHHNQVRHNNPLLNLLPPGFLNEAQR
Sbjct:    1 MTLYKLPRGLLEIPKGTNTSGTENSNFTNNLERTNTILAQFVSASEFSKKLILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSKDKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPG---------------KEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNPSSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPATKINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGHSIQRCKQLQQRIIDWACELVKNSSMCKNCWRDLAAMTALHCSLISSSASQADAIDNKVWSTNINLFSQDFINAICRGLVSLSHDNKLLELLLSQPGCVSIIIIFLSWINQYFNDNLNDTSVSSNGGGGVSNGSSIPLKYPFGEEFVKFINILAVRKTTNTDTTGHMKLPTHLPELSFLTGFQPLKVPYKIYDIYSHDKPITNENIEINEMDIRISFIVSVCKRLALKWPNLLVFDNTNNRFSIVPIPDPIPVKKYVKIEPSIANRKPVNVALASMKNNNTKPNGFVGQNIPSKVLADGLAAVGEPSKGIITDVKIAKCIQEQIAQDIKSSTTVDNNKSLTVKAKEDSYVIAPAPGLILSSNLPPDFKSISSTSASTQLTDNNLSYSPGTESIVQHHDQSDHNKINQLTSKSNHSYNPNREQFEKDLPPRFANKRSYSQEISTIGSINEQPRSYFDQHQQNKGGFLSMNYWDSINDYPNSNSQNQFDTNLTKKESEILLPPTVPTSWLTDNNSYDHKMDSTSISNSQLQQFPFGSNLMHSQAGGHTFAGLNNQSPQNHINLIQQYSNQFNQSQQPPLPPPSSGLNKDQENQLQYLLQSVTTNANAPRFRSQTDSLLPAQMNFDNQISSFMNNTRMPSTKFPSIPPPTQQLPSVSGINSHLAMQQQQQQQQQNYDSSYQMTTRPNFYDKPVFSTSNQSAGFSGGGYNSGSIMAQQQQHNHHHHHNQVRHNNPLLNLLPPGFLNEAQR 1030
The following BLAST results are available for this feature:
BLAST of Protein SMG7-like Protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
SMG71.193e-3331.23SMG7 nonsense mediated mRNA decay factor [Source:H... [more]
SMG75.233e-3332.32SMG7 nonsense mediated mRNA decay factor [Source:H... [more]
SMG75.704e-3332.32SMG7 nonsense mediated mRNA decay factor [Source:H... [more]
SMG76.697e-3332.32SMG7 nonsense mediated mRNA decay factor [Source:H... [more]
SMG71.089e-3132.66SMG7 nonsense mediated mRNA decay factor [Source:H... [more]
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BLAST of Protein SMG7-like Protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protein SMG7-like Protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protein SMG7-like Protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
smg79.480e-3132.32SMG7 nonsense mediated mRNA decay factor [Source:Z... [more]
smg71.013e-3032.32SMG7 nonsense mediated mRNA decay factor [Source:Z... [more]
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BLAST of Protein SMG7-like Protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
smg79.325e-3332.32SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg71.368e-3232.70SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg71.566e-3232.70SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg71.590e-3232.70SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg71.600e-3232.32SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
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BLAST of Protein SMG7-like Protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Smg71.225e-3331.23Smg-7 homolog, nonsense mediated mRNA decay factor... [more]
Smg74.772e-3332.32Smg-7 homolog, nonsense mediated mRNA decay factor... [more]
Smg75.638e-3332.70Smg-7 homolog, nonsense mediated mRNA decay factor... [more]
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BLAST of Protein SMG7-like Protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q92540|SMG7_HUMAN2.739e-3232.32Protein SMG7 OS=Homo sapiens OX=9606 GN=SMG7 PE=1 ... [more]
sp|Q5RJH6|SMG7_MOUSE3.338e-3232.32Protein SMG7 OS=Mus musculus OX=10090 GN=Smg7 PE=2... [more]
sp|Q9FZ99|SMG7L_ARATH4.867e-626.89Protein SMG7L OS=Arabidopsis thaliana OX=3702 GN=S... [more]
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BLAST of Protein SMG7-like Protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0P6JV937.812e-3131.23Protein SMG7 isoform 1 OS=Heterocephalus glaber OX... [more]
B4DLY09.200e-3131.23cDNA FLJ55570, highly similar to Protein SMG7 (Fra... [more]
A0A2K5DI611.655e-3031.23SMG7 nonsense mediated mRNA decay factor OS=Aotus ... [more]
A0A286XMC41.690e-3031.23SMG7 nonsense mediated mRNA decay factor OS=Cavia ... [more]
E9PD501.698e-3031.23Protein SMG7 OS=Homo sapiens OX=9606 GN=SMG7 PE=1 ... [more]
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BLAST of Protein SMG7-like Protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
smg71.800e-3132.32SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg72.022e-3132.32SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg71.014e-2028.90SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg65.772e-620.94SMG6 nonsense mediated mRNA decay factor [Source:Z... [more]
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BLAST of Protein SMG7-like Protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protein SMG7-like Protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Protein SMG7-like Protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO343798.790e-2424.68Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Protein SMG7-like Protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
smg72.677e-3131.94SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg72.748e-3132.32SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg72.853e-3132.32SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
smg71.133e-1533.85SMG7 nonsense mediated mRNA decay factor [Source:N... [more]
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BLAST of Protein SMG7-like Protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000071698.10.000e+099.90SMESG000071698.1[more]
SMESG000071698.10.000e+098.37SMESG000071698.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30031288 ID=SMED30031288|Name=Protein SMG7-like Protein|organism=Schmidtea mediterranea sexual|type=transcript|length=3716bp
GTTTTTAAATTTAATTAAATAATTAATTTGTTTATATTAAAAATAATTCT
AACTTTTATATTTAGGCTTAAAATTTATTTATTTACAACTAATTTGATAT
TGCTATAATGACTTTGTATAAATTACCTCGAGGCCTTTTGGAAATTCCTA
AAGGAACTAACACAAGCGGTACTGAAAATTCAAATTTTACAAATAATTTA
GAAAGAACTAACACGATATTGGCTCAGTTTGTATCGGCTTCTGAATTTAG
TAAGAAGCTAATATTAAGACAAGAATTAGAAGAGTCGTATTTCAGTTTAA
CAATGTATTATTTGAAAGATACTGTGAAACATAAAATTGAACAAGACATG
TGGAATAATCTTTTTAAAAAAAATATTTCAGATTTACAAGGGAAAATAAA
AAGTAAAGATAAATCGGAATCTTCAAGAGCTCAATCAGAAATTTCTATAT
TCCTAGATGAAGCAGTAGGATTTTATTCAAAATGTATTGATACAATTAGT
TTGGTTCACAACATACGTTTACCAGGAAGTGATAATCTTGGTAAATCGAA
TTTACAATCACATAGAAATTTAGAAGAAGCAGCTAGCGAGGAAGATATTC
GTTATATTGTACAGCATTTCTATGTACACATGGGTGATCTTTCTCGATAT
CACAATCTTACCAAACAAGCGAAATTCTATTATGAATTAGCAGTACAACT
GAATCCATCATCAGGTCATGCGTACAATCAACTAGCTATCCTTGAATCAG
CTTCTGTAGTCCATGCAAATATAACATCCAACAATTATCAACACATTATA
CGAACAGTGTTGATGTATGAATATGCCAATTCATGCGAAATACCATTTCC
AGCTACTAAAATCAATTTGGAATCGCTTTTGCGTCACATAAATGAGCAAT
CAGTTTCCACTTTGCTTACGTCAAACAATTCCATAACAGATCTGAACTGT
ATTTATTCCGTATGCATTGCTTGGATTCACGTGTATGGAAATTTAAAGAT
GGGGCATAGCATACAACGGTGCAAACAATTACAGCAGCGCATTATTGACT
GGGCCTGTGAGCTGGTTAAGAACTCTTCAATGTGCAAAAATTGTTGGCGG
GATTTAGCAGCAATGACAGCTCTTCATTGCTCATTAATATCAAGTTCTGC
ATCTCAAGCCGATGCTATCGATAATAAAGTCTGGAGCACGAACATTAACC
TGTTTAGTCAGGATTTCATAAATGCTATTTGTCGAGGATTGGTTTCATTA
TCCCATGACAATAAATTGCTCGAGTTGTTACTGTCCCAGCCGGGCTGTGT
CAGTATTATCATCATATTTTTATCATGGATCAACCAATATTTCAATGATA
ATCTTAATGATACATCTGTCAGCAGCAACGGCGGCGGCGGTGTTAGTAAC
GGCTCATTTATTCCACTAAAATATCCATTCGGAGAGGAATTTGTCAAATT
TATTAACATTCTTGCCGTAAGAAAAACAACAAATACCGACACGACTGGCC
ATATGAAATTGCCAACACATCTTCCAGAATTGAGCTTTCTAACAGGATTT
CAGCCTTTGAAAGTGCCTTATAAGATATACGATATCTATTCACACGATAA
ACCGATAACCAATGAAAACATTGAAATCAATGAAATGGACATTCGGATAT
CGTTTATAGTTTCTGTTTGCAAAAGATTGGCGCTTAAATGGCCAAATCTG
CTGGTATTTGACAACACTAATAATCGATTTTCAATTGTTCCAATTCCGGA
CCCGATTCCAGTGAAAAAATATGTAAAAATAGAACCGTCAATAGCCAATA
GGAAACCAGTGAATGTCGCATTAGCATCGATGAAAAACAATAACACAAAG
CCAAATGGATTTGTTGGACAGAATATTCCTAGCAAAGTATTGGCCGATGG
GTTGGCAGCGGTAGGGGAACCGAGCAAAGGAATAATAACTGATGTAAAAA
TTGCCAAATGCATTCAAGAACAGATCGCACAAGACATAAAATCATCGACA
ACAGTGGATAATAATAAATCACTGACAGTGAAAGCCAAAGAAGATAGTTA
CGTAATTGCACCAGCTCCAGGTCTCATTTTATCCAGTAATCTGCCACCGG
ATTTCAAATCAATATCCTCTACATCGGCATCGACACAACTAACCGACAAT
AACTTATCCTATTCACCTGGAACCGAGTCGATTGTGCAACACCACGATCA
ATCTGATCACAACAAAATCAATCAATTAACCTCGAAAAGCAACCATTCCT
ACAATCCAAATCGGGAGCAATTCGAGAAAGATCTACCACCGAGATTCGCT
AATAAACGATCTTATTCCCAGGAAATTTCAACGATAGGATCGATAAACGA
ACAGCCGCGCAGCTATTTCGATCAGCATCAACAAAACAAAGGCGGTTTTC
TCTCGATGAATTACTGGGATTCGATAAACGATTATCCGAATAGTAATTCT
CAGAATCAGTTCGATACGAATCTCACTAAAAAAGAATCGGAAATTCTCTT
ACCGCCGACAGTTCCGACTTCGTGGCTCACAGATAACAATAGCTATGATC
ATAAGATGGATTCGACTAGCATCAGTAATTCGCAATTGCAACAGTTCCCT
TTCGGCAGCAATTTGATGCATTCGCAAGCAGGAGGTCACACATTTGCCGG
CCTCAATAATCAATCGCCTCAAAATCATATCAATCTCATCCAGCAGTATT
CCAACCAATTCAATCAAAGCCAACAGCCCCCGTTGCCACCACCGTCATCG
GGCTTAAACAAAGACCAGGAAAATCAATTGCAATATCTCTTGCAATCTGT
CACTACGAATGCCAACGCTCCGAGATTCCGATCACAAACTGATTCGTTGT
TGCCTGCTCAAATGAATTTCGACAACCAAATCTCATCATTTATGAATAAT
ACTAGAATGCCTTCGACAAAATTTCCATCGATTCCACCTCCAACTCAACA
GTTGCCATCAGTATCAGGAATCAATTCCCATTTGGCAATGCAACAGCAGC
AGCAACAACAGCAACAGAATTACGACTCGTCCTATCAAATGACTACAAGG
CCAAATTTCTATGACAAACCAGTATTCAGTACGAGCAACCAATCGGCGGG
ATTCAGTGGAGGAGGATACAACTCAGGATCAATAATGGCTCAGCAACAGC
AGCACAATCACCATCACCACCACAACCAAGTCCGGCACAACAATCCATTG
TTGAATCTGTTACCACCCGGTTTCCTCAATGAGGCGCAGAGATGATGCAA
AATGTGGTTGAAATTAATTACTGATTAATTGTCACAACTTGCAGCACGCA
ACAACAACAACAGCAGCAATGGCAACAACGCGCCTTCAATCATTATTGAT
AATAATTATAATAATAATAGCAGCAGTTAAAGAAACTACAATGCCGAAGT
CTCAATTATCCAATATACACATATTGATTAGCACAGTGCTGAATGTTTCT
ATATATATAAATCAAATAAATTACTTAATTATCAATGTTGTTGTTATTAT
CTCACTTTCTATTGATGTAATTGTGTTTCTCAGATCGATATTATTGATTA
TTATCACTGATAATTATTATTGATCATCATTGATTGATTGAATGATTTTA
TCCTATCGATCATCGATCAATGATGGCACGCGGGGCCTTACGTTTCTAGA
ATTTGTGTTCAATAAATTTTTAGTTTCGTAATTTTATAATTCTAAATTTG
ATTGGTTAATAAATTT
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protein sequence of SMED30031288-orf-1

>SMED30031288-orf-1 ID=SMED30031288-orf-1|Name=SMED30031288-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1046bp
MTLYKLPRGLLEIPKGTNTSGTENSNFTNNLERTNTILAQFVSASEFSKK
LILRQELEESYFSLTMYYLKDTVKHKIEQDMWNNLFKKNISDLQGKIKSK
DKSESSRAQSEISIFLDEAVGFYSKCIDTISLVHNIRLPGSDNLGKSNLQ
SHRNLEEAASEEDIRYIVQHFYVHMGDLSRYHNLTKQAKFYYELAVQLNP
SSGHAYNQLAILESASVVHANITSNNYQHIIRTVLMYEYANSCEIPFPAT
KINLESLLRHINEQSVSTLLTSNNSITDLNCIYSVCIAWIHVYGNLKMGH
SIQRCKQLQQRIIDWACELVKNSSMCKNCWRDLAAMTALHCSLISSSASQ
ADAIDNKVWSTNINLFSQDFINAICRGLVSLSHDNKLLELLLSQPGCVSI
IIIFLSWINQYFNDNLNDTSVSSNGGGGVSNGSFIPLKYPFGEEFVKFIN
ILAVRKTTNTDTTGHMKLPTHLPELSFLTGFQPLKVPYKIYDIYSHDKPI
TNENIEINEMDIRISFIVSVCKRLALKWPNLLVFDNTNNRFSIVPIPDPI
PVKKYVKIEPSIANRKPVNVALASMKNNNTKPNGFVGQNIPSKVLADGLA
AVGEPSKGIITDVKIAKCIQEQIAQDIKSSTTVDNNKSLTVKAKEDSYVI
APAPGLILSSNLPPDFKSISSTSASTQLTDNNLSYSPGTESIVQHHDQSD
HNKINQLTSKSNHSYNPNREQFEKDLPPRFANKRSYSQEISTIGSINEQP
RSYFDQHQQNKGGFLSMNYWDSINDYPNSNSQNQFDTNLTKKESEILLPP
TVPTSWLTDNNSYDHKMDSTSISNSQLQQFPFGSNLMHSQAGGHTFAGLN
NQSPQNHINLIQQYSNQFNQSQQPPLPPPSSGLNKDQENQLQYLLQSVTT
NANAPRFRSQTDSLLPAQMNFDNQISSFMNNTRMPSTKFPSIPPPTQQLP
SVSGINSHLAMQQQQQQQQQNYDSSYQMTTRPNFYDKPVFSTSNQSAGFS
GGGYNSGSIMAQQQQHNHHHHHNQVRHNNPLLNLLPPGFLNEAQR*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000101muscle cell
PLANA:0000142posterior region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR019458EST1
IPR018834DNA/RNA-bd_Est1-type
IPR011990TPR-like_helical_dom_sf
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0051721protein phosphatase 2A binding
GO:0070034telomerase RNA binding
GO:0004540ribonuclease activity
GO:0042162telomeric DNA binding
GO:0043021ribonucleoprotein complex binding
Vocabulary: biological process
TermDefinition
GO:0090501RNA phosphodiester bond hydrolysis
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0006406mRNA export from nucleus
GO:0007004telomere maintenance via telomerase
GO:0035303regulation of dephosphorylation
GO:0043487regulation of RNA stability
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
GO:0005697telomerase holoenzyme complex
GO:0005737cytoplasm
GO:0005829cytosol
GO:0045111intermediate filament cytoskeleton
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018834DNA/RNA-binding domain, Est1-typePFAMPF10373EST1_DNA_bindcoord: 188..373
e-value: 1.3E-11
score: 44.6
IPR019458Telomerase activating protein Est1PFAMPF10374EST1coord: 76..183
e-value: 1.1E-12
score: 48.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 28..263
e-value: 5.4E-37
score: 129.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 47..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1010..1045
NoneNo IPR availablePANTHERPTHR15696SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7coord: 54..991
NoneNo IPR availablePANTHERPTHR15696:SF5PROTEIN SMG7coord: 54..991