Splicing factor U2AF 35 kDa subunit

Overview
NameSplicing factor U2AF 35 kDa subunit
Smed IDSMED30031036
Length (bp)814
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Splicing factor U2AF 35 kDa subunit (SMED30031036) t-SNE clustered cells

Violin plots show distribution of expression levels for Splicing factor U2AF 35 kDa subunit (SMED30031036) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Splicing factor U2AF 35 kDa subunit (SMED30031036) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Splicing factor U2AF 35 kDa subunit (SMED30031036) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30031036

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30031036SMESG000034350.1 SmedASXL_003613SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30031036SMESG000034350.1 SmedASXL_003613SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
neoblastSMED30031036SMESG000034350.1 dd_Smed_v4_4061_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30031036SMESG000034350.1 dd_Smed_v4_4061_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30031036SMESG000034350.1 dd_Smed_v6_4061_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Human
Match: U2AF1 (U2 small nuclear RNA auxiliary factor 1 [Source:HGNC Symbol;Acc:HGNC:12453])

HSP 1 Score: 293.893 bits (751), Expect = 3.140e-100
Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTIL+QN+Y  PQN+AQTADGSH     ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSH----CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Human
Match: U2AF1L5 (U2 small nuclear RNA auxiliary factor 1 like 5 [Source:HGNC Symbol;Acc:HGNC:51830])

HSP 1 Score: 293.893 bits (751), Expect = 3.140e-100
Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTIL+QN+Y  PQN+AQTADGSH     ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSH----CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Human
Match: U2AF1 (U2 small nuclear RNA auxiliary factor 1 [Source:HGNC Symbol;Acc:HGNC:12453])

HSP 1 Score: 282.722 bits (722), Expect = 9.994e-96
Identity = 152/190 (80.00%), Postives = 170/190 (89.47%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI L N+Y  PQN++Q+ADG       ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG----LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Human
Match: U2AF1L5 (U2 small nuclear RNA auxiliary factor 1 like 5 [Source:HGNC Symbol;Acc:HGNC:51830])

HSP 1 Score: 282.722 bits (722), Expect = 9.994e-96
Identity = 152/190 (80.00%), Postives = 170/190 (89.47%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI L N+Y  PQN++Q+ADG       ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG----LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Human
Match: U2AF1L4 (U2 small nuclear RNA auxiliary factor 1 like 4 [Source:HGNC Symbol;Acc:HGNC:23020])

HSP 1 Score: 275.018 bits (702), Expect = 4.795e-93
Identity = 149/190 (78.42%), Postives = 167/190 (87.89%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIG CRHG+ CSRLHNKPTFSQTI+L NLY  PQNTAQTADGSH +    +S+VE Q+ +D FFEEVF E +E+YGEIEEMNVCDNLGDHLVGNVY+KFRREED E+AV EL+NRWF G+ VH ELSPVTDFRE+CC QYE GECTRGGFCNFMHL+PIS+ L+R+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGVCRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHCH----VSDVEVQEHYDSFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDGERAVAELSNRWFNGQAVHGELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISQNLQRQLY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Celegans
Match: uaf-2 (U2AF splicing factor [Source:UniProtKB/TrEMBL;Acc:A0A0K3AXF6])

HSP 1 Score: 206.838 bits (525), Expect = 8.334e-66
Identity = 116/190 (61.05%), Postives = 146/190 (76.84%), Query Frame = 3 
Query:   42 AEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            AEYLASI+GTEKDKVNCSF+FK GACRHG+ CSR H+ PTFS T++L+N Y  P    + AD       V     + Q+ FDDF+EEVF+E E +YGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA  +LNNRWF G+P++AEL PVTDFRE+ C Q+E   C++GGFCNFMHLK IS EL  +LY 
Sbjct:   10 AEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQADAFDK---VGKRNDQEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYG 196
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Celegans
Match: uaf-2 (U2AF splicing factor [Source:UniProtKB/TrEMBL;Acc:A0A0K3AXF6])

HSP 1 Score: 206.838 bits (525), Expect = 8.334e-66
Identity = 116/190 (61.05%), Postives = 146/190 (76.84%), Query Frame = 3 
Query:   42 AEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            AEYLASI+GTEKDKVNCSF+FK GACRHG+ CSR H+ PTFS T++L+N Y  P    + AD       V     + Q+ FDDF+EEVF+E E +YGE+EE+NVC+N+G+H+VGNVY+KF +EEDAEKA  +LNNRWF G+P++AEL PVTDFRE+ C Q+E   C++GGFCNFMHLK IS EL  +LY 
Sbjct:   10 AEYLASIYGTEKDKVNCSFFFKTGACRHGDKCSRAHHTPTFSPTVVLKNFYHNPVVDVRQADAFDK---VGKRNDQEQRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNRWFNGQPIYAELCPVTDFRESRCRQHEVTTCSKGGFCNFMHLKAISAELGDRLYG 196
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Fly
Match: U2af38 (gene:FBgn0017457 transcript:FBtr0333408)

HSP 1 Score: 285.419 bits (729), Expect = 9.184e-97
Identity = 152/190 (80.00%), Postives = 172/190 (90.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSR+HNKPTFSQT+LLQNLY+ PQN+A++ADGSH     ++S+ E Q+ +D+FFE+VF+ECE++YGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA  +LNNRWFGGRPV++ELSPVTDFREACC QYE GECTR GFCNFMHLKPISRELRR LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSH--LVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Fly
Match: U2af38 (gene:FBgn0017457 transcript:FBtr0078133)

HSP 1 Score: 285.419 bits (729), Expect = 9.184e-97
Identity = 152/190 (80.00%), Postives = 172/190 (90.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSR+HNKPTFSQT+LLQNLY+ PQN+A++ADGSH     ++S+ E Q+ +D+FFE+VF+ECE++YGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA  +LNNRWFGGRPV++ELSPVTDFREACC QYE GECTR GFCNFMHLKPISRELRR LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSH--LVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Fly
Match: CG3294 (gene:FBgn0031628 transcript:FBtr0077381)

HSP 1 Score: 55.0694 bits (131), Expect = 2.433e-8
Identity = 37/179 (20.67%), Postives = 81/179 (45.25%), Query Frame = 3 
Query:   48 YLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXX----XIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            +L  +  T  ++  C F+ +   CR+G  C+  H +P   + +L+++ +    ++      +H  +  +   +E  +       +      +E   ++G I       N  +HL G+V++++  E  A +A T L  R++  + ++ E S +  +R A C      +C +G  C ++HL
Sbjct:  156 HLLRVMETHPEERACEFFSRTNCCRYGHACTFNHRRPMLGRILLIRHFF---NHSMLQKRCTHKEYASAEEHLELTEQDLRHDYDEFFNDVVEELRKFGTIVNFRTVRNTLEHLRGHVFVEYTNERSALRAFTNLQGRYYASKRLNVEFSNLRTWRGAVCGLSLTRKCPKGNDCGYLHL 331
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Zebrafish
Match: u2af1 (U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1])

HSP 1 Score: 283.878 bits (725), Expect = 2.481e-96
Identity = 154/191 (80.63%), Postives = 170/191 (89.01%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI L N+Y  PQNTAQ+ADG ++     +S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV  LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY 
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADGLNA-----VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Zebrafish
Match: zrsr2 (zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495])

HSP 1 Score: 108.612 bits (270), Expect = 1.339e-26
Identity = 58/170 (34.12%), Postives = 92/170 (54.12%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            +GTEKDK NC F+ K GACR G+ CSR H+ P  S T++++ ++++        D   ++  +  SE E        F E  +   +  G + +  V  N   HL GNVY+++  EE  ++A    N RW+ GR +  E SPVT ++ A C  ++  +C +G  CNF+H+
Sbjct:   24 YGTEKDKANCPFFLKTGACRFGDRCSRKHDHPASSCTLMVRGMFVSFGMEQSRRDDYDTDASLEYSE-EELHQQFLDFYEDALPEFKNAGRVVQFKVSCNFEPHLRGNVYVQYETEEQCKEAFVMFNGRWYAGRQLQCEFSPVTRWKTAICGLFDRRKCPKGKHCNFLHV 192
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Zebrafish
Match: zrsr2 (zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495])

HSP 1 Score: 108.227 bits (269), Expect = 3.949e-26
Identity = 58/170 (34.12%), Postives = 92/170 (54.12%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            +GTEKDK NC F+ K GACR G+ CSR H+ P  S T++++ ++++        D   ++  +  SE E        F E  +   +  G + +  V  N   HL GNVY+++  EE  ++A    N RW+ GR +  E SPVT ++ A C  ++  +C +G  CNF+H+
Sbjct:  176 YGTEKDKANCPFFLKTGACRFGDRCSRKHDHPASSCTLMVRGMFVSFGMEQSRRDDYDTDASLEYSE-EELHQQFLDFYEDALPEFKNAGRVVQFKVSCNFEPHLRGNVYVQYETEEQCKEAFVMFNGRWYAGRQLQCEFSPVTRWKTAICGLFDRRKCPKGKHCNFLHV 344
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Zebrafish
Match: CR450764.13 (zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:NCBI gene;Acc:100005490])

HSP 1 Score: 95.1301 bits (235), Expect = 3.870e-23
Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACC 515
            +GTEKDK NC F+ K GACR G+ CSR H+ P  S T++++ ++++        D   ++  +  SE E        F E  +   +  G + +  V  N   HL GNVY+++  EE  ++A    N RW+ GR +  E SPVT ++ A C
Sbjct:   24 YGTEKDKANCPFFLKTGACRFGDRCSRKHDHPASSCTLMVRGMFVSFGMEQSRRDDYDTDASLEYSE-EELHQQFLDFYEDALPEFKNAGRVVQFKVSCNFEPHLRGNVYVQYETEEQCKEAFVMFNGRWYAGRQLQCEFSPVTRWKTAIC 173
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Xenopus
Match: u2af1 (U2 small nuclear RNA auxiliary factor 1 [Source:NCBI gene;Acc:733934])

HSP 1 Score: 196.052 bits (497), Expect = 6.073e-62
Identity = 113/155 (72.90%), Postives = 130/155 (83.87%), Query Frame = 3 
Query:  147 HNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            H  P   QTI L N+Y  PQN++Q+ADG       ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY 
Sbjct:   24 HPLPLSFQTIALLNIYRNPQNSSQSADG----LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 174
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Xenopus
Match: u2af1 (U2 small nuclear RNA auxiliary factor 1 [Source:NCBI gene;Acc:733934])

HSP 1 Score: 195.667 bits (496), Expect = 1.047e-61
Identity = 113/154 (73.38%), Postives = 130/154 (84.42%), Query Frame = 3 
Query:  147 HNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            H  P   QTI L N+Y  PQN++Q+ADG       ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY
Sbjct:   24 HPLPLSFQTIALLNIYRNPQNSSQSADG----LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVKDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 173
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Xenopus
Match: scgn (secretagogin, EF-hand calcium binding protein [Source:Xenbase;Acc:XB-GENE-988344])

HSP 1 Score: 120.553 bits (301), Expect = 2.385e-31
Identity = 63/170 (37.06%), Postives = 95/170 (55.88%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            +GTEKD+ NC FY K GACR GE CSR HN P+ SQT+L++++++         D   ++  +   E E        F    +   +  G++ +  V  N   HL GNVY++++ EE+  KA T+ N RW+  R +  E SPVT ++ A C  +E  +C RG  CNF+H+
Sbjct:  139 YGTEKDRANCPFYLKTGACRFGERCSRKHNYPSSSQTLLIRSMFVTFGMEQCRRDDYDTDASLEYGE-EEIYQQFLEFYADVVPEFKNAGKVVQFKVSCNFEPHLRGNVYVQYQTEEECLKAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 307
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Xenopus
Match: scgn (secretagogin, EF-hand calcium binding protein [Source:Xenbase;Acc:XB-GENE-988344])

HSP 1 Score: 120.168 bits (300), Expect = 6.025e-31
Identity = 63/170 (37.06%), Postives = 95/170 (55.88%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            +GTEKD+ NC FY K GACR GE CSR HN P+ SQT+L++++++         D   ++  +   E E        F    +   +  G++ +  V  N   HL GNVY++++ EE+  KA T+ N RW+  R +  E SPVT ++ A C  +E  +C RG  CNF+H+
Sbjct:  139 YGTEKDRANCPFYLKTGACRFGERCSRKHNYPSSSQTLLIRSMFVTFGMEQCRRDDYDTDASLEYGE-EEIYQQFLEFYADVVPEFKNAGKVVQFKVSCNFEPHLRGNVYVQYQTEEECLKAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 307
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Xenopus
Match: scgn (secretagogin, EF-hand calcium binding protein [Source:Xenbase;Acc:XB-GENE-988344])

HSP 1 Score: 120.168 bits (300), Expect = 6.428e-31
Identity = 63/170 (37.06%), Postives = 95/170 (55.88%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            +GTEKD+ NC FY K GACR GE CSR HN P+ SQT+L++++++         D   ++  +   E E        F    +   +  G++ +  V  N   HL GNVY++++ EE+  KA T+ N RW+  R +  E SPVT ++ A C  +E  +C RG  CNF+H+
Sbjct:  139 YGTEKDRANCPFYLKTGACRFGERCSRKHNYPSSSQTLLIRSMFVTFGMEQCRRDDYDTDASLEYGE-EEIYQQFLEFYADVVPEFKNAGKVVQFKVSCNFEPHLRGNVYVQYQTEEECLKAFTQFNGRWYASRQLQCEFSPVTRWKTAICGLFERQKCPRGKHCNFLHV 307
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Mouse
Match: U2af1 (U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Source:MGI Symbol;Acc:MGI:98884])

HSP 1 Score: 293.893 bits (751), Expect = 2.084e-100
Identity = 157/190 (82.63%), Postives = 174/190 (91.58%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTIL+QN+Y  PQN+AQTADGSH     ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADGSH----CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Mouse
Match: Gm49396 (predicted gene, 49396 [Source:MGI Symbol;Acc:MGI:6121629])

HSP 1 Score: 285.034 bits (728), Expect = 4.466e-97
Identity = 155/191 (81.15%), Postives = 171/191 (89.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI+L NLY  PQNTAQTADGSH +    +S+VE Q+ +D+FFEEVF E +E+YGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV ELNNRWF G+ VHAELSPVTDFRE+CC QYE GECTRGGFCNFMHL+PISR LRR+LY 
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHCH----VSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYG 187
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Mouse
Match: Gm49396 (predicted gene, 49396 [Source:MGI Symbol;Acc:MGI:6121629])

HSP 1 Score: 285.034 bits (728), Expect = 4.466e-97
Identity = 155/191 (81.15%), Postives = 171/191 (89.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI+L NLY  PQNTAQTADGSH +    +S+VE Q+ +D+FFEEVF E +E+YGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV ELNNRWF G+ VHAELSPVTDFRE+CC QYE GECTRGGFCNFMHL+PISR LRR+LY 
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHCH----VSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYG 187
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Mouse
Match: U2af1l4 (U2 small nuclear RNA auxiliary factor 1-like 4 [Source:MGI Symbol;Acc:MGI:2678374])

HSP 1 Score: 285.034 bits (728), Expect = 4.466e-97
Identity = 155/191 (81.15%), Postives = 171/191 (89.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI+L NLY  PQNTAQTADGSH +    +S+VE Q+ +D+FFEEVF E +E+YGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV ELNNRWF G+ VHAELSPVTDFRE+CC QYE GECTRGGFCNFMHL+PISR LRR+LY 
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHCH----VSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYG 187
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Mouse
Match: U2af1 (U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 [Source:MGI Symbol;Acc:MGI:98884])

HSP 1 Score: 282.722 bits (722), Expect = 6.634e-96
Identity = 152/190 (80.00%), Postives = 170/190 (89.47%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI L N+Y  PQN++Q+ADG       ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG----LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. UniProt/SwissProt
Match: sp|Q3T127|U2AF4_BOVIN (Splicing factor U2AF 26 kDa subunit OS=Bos taurus OX=9913 GN=U2AF1L4 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 5.997e-97
Identity = 155/190 (81.58%), Postives = 172/190 (90.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI+L NLY  PQNTAQTADGSH +    +S+VE Q+ +D+FFEEVF E +E+YGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV ELNNRWF G+ VHAELSPVTDFRE+CC QYE GECTRGGFCNFMHL+PISR+LRR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHCH----VSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVVELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRDLRRQLY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. UniProt/SwissProt
Match: sp|Q7TP17|U2AF4_RAT (Splicing factor U2AF 26 kDa subunit OS=Rattus norvegicus OX=10116 GN=U2af1l4 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.124e-96
Identity = 155/191 (81.15%), Postives = 171/191 (89.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI+L NLY  PQNTAQTADGSH +    +S+VE Q+ +D+FFEEVF E +E+YGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV ELNNRWF G+ VHAELSPVTDFRE+CC QYE GECTRGGFCNFMHL+PISR LRR+LY 
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHCH----VSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYG 187
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. UniProt/SwissProt
Match: sp|Q8BGJ9|U2AF4_MOUSE (Splicing factor U2AF 26 kDa subunit OS=Mus musculus OX=10090 GN=U2af1l4 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.124e-96
Identity = 155/191 (81.15%), Postives = 171/191 (89.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI+L NLY  PQNTAQTADGSH +    +S+VE Q+ +D+FFEEVF E +E+YGEIEEMNVCDNLGDHLVGNVY+KFRREEDAE+AV ELNNRWF G+ VHAELSPVTDFRE+CC QYE GECTRGGFCNFMHL+PISR LRR+LY 
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADGSHCH----VSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYG 187
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. UniProt/SwissProt
Match: sp|Q94535|U2AF1_DROME (Splicing factor U2af 38 kDa subunit OS=Drosophila melanogaster OX=7227 GN=U2af38 PE=1 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 9.206e-96
Identity = 152/190 (80.00%), Postives = 172/190 (90.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSR+HNKPTFSQT+LLQNLY+ PQN+A++ADGSH     ++S+ E Q+ +D+FFE+VF+ECE++YGEIEEMNVCDNLGDHLVGNVYIKFR E DAEKA  +LNNRWFGGRPV++ELSPVTDFREACC QYE GECTR GFCNFMHLKPISRELRR LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRIHNKPTFSQTVLLQNLYVNPQNSAKSADGSH--LVANVSDEEMQEHYDNFFEDVFVECEDKYGEIEEMNVCDNLGDHLVGNVYIKFRNEADAEKAANDLNNRWFGGRPVYSELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISRELRRYLY 188
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. UniProt/SwissProt
Match: sp|A1A4K8|U2AF1_BOVIN (Splicing factor U2AF 35 kDa subunit OS=Bos taurus OX=9913 GN=U2AF1 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 4.337e-95
Identity = 152/190 (80.00%), Postives = 170/190 (89.47%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI L N+Y  PQN++Q+ADG       ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQSADG----LRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. TrEMBL
Match: Q15ES3 (Putative u2 snRNP auxiliary factor, small subunit OS=Schistosoma mansoni OX=6183 GN=Smp_093100 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.108e-100
Identity = 167/190 (87.89%), Postives = 179/190 (94.21%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHGE CSRLHNKP+F QTILLQNLYIAPQNTAQ+ADGSH    ++++EV+AQQ+FD+FFEEVF+ECEE+YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV +LN RWFGGRPVHAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISREL RKLY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSADGSH----INLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. TrEMBL
Match: C1LIH5 (Splicing factor U2AF 35 kDa subunit OS=Schistosoma japonicum OX=6182 GN=EWB00_004850 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.108e-100
Identity = 167/190 (87.89%), Postives = 179/190 (94.21%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHGE CSRLHNKP+F QTILLQNLYIAPQNTAQ+ADGSH    ++++EV+AQQ+FD+FFEEVF+ECEE+YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV +LN RWFGGRPVHAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISREL RKLY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSADGSH----INLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. TrEMBL
Match: A0A4E0R4K7 (U2 small nuclear RNA auxiliary factor 1 OS=Fasciola hepatica OX=6192 GN=D915_006926 PE=4 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 2.703e-100
Identity = 167/190 (87.89%), Postives = 179/190 (94.21%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHGE CSRLHNKP+F QTILLQNLYIAPQNTAQ+ADGSH    ++++EV+AQQ+FD+FFEEVF+ECEE+YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV +LN RWFGGRPVHAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISREL RKLY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSADGSH----INLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNLRWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. TrEMBL
Match: A0A4S2LLL7 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_006343 PE=4 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.548e-100
Identity = 167/190 (87.89%), Postives = 179/190 (94.21%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHGE CSRLHNKP+F QTILLQNLYIAPQNTAQ+ADGSH    ++++EV+AQQ+FD+FFEEVF+ECEE+YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV +LN RWFGGRPVHAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISREL RKLY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSADGSH----INLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNLRWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. TrEMBL
Match: Q5BYB3 (SJCHGC07381 protein (Fragment) OS=Schistosoma japonicum OX=6182 PE=2 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 6.315e-99
Identity = 165/188 (87.77%), Postives = 177/188 (94.15%), Query Frame = 3 
Query:   45 EYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            EYLASIFGTEKDKVNCSFYFKIGACRHGE CSRLHNKP+F QTILLQNLYIAPQNTAQ+ADGSH    ++++EV+AQQ+FD+FFEEVF+ECEE+YGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAV +LN RWFGGRPVHAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISREL RKLY
Sbjct:    1 EYLASIFGTEKDKVNCSFYFKIGACRHGEQCSRLHNKPSFGQTILLQNLYIAPQNTAQSADGSH----INLTEVQAQQIFDEFFEEVFVECEEKYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVQDLNERWFGGRPVHAELSPVTDFREACCRQYELGECTRGGFCNFMHLKPISRELCRKLY 184
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Cavefish
Match: u2af1 (splicing factor U2AF 35 kDa subunit [Source:NCBI gene;Acc:103046898])

HSP 1 Score: 283.878 bits (725), Expect = 1.615e-96
Identity = 154/191 (80.63%), Postives = 170/191 (89.01%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTI L N+Y  PQNTAQ+ADG ++     +S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV  LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY 
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADGLNA-----VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVLNLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Cavefish
Match: zrsr2 (zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 [Source:NCBI gene;Acc:103023654])

HSP 1 Score: 108.612 bits (270), Expect = 2.405e-26
Identity = 60/170 (35.29%), Postives = 97/170 (57.06%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            +GTEKD+ NC F+ K G+CR G+ CSR H+ P  S T++++N+++         D   ++  +  SE E  Q F DF+E+V +E       ++    C N   HL GNVY+++  E+  ++A    N RW+ GR +  E SPVT ++ A C  ++  +C +G  CNF+H+
Sbjct:  193 YGTEKDRANCPFFLKTGSCRFGDRCSRKHDHPLTSSTLMVRNMFVTFGMEQLKRDDYDTDASLEYSEDEIFQQFLDFYEDVLLEFRNAGKVVQFKVSC-NFEPHLRGNVYVQYETEDQCKEAFMMFNGRWYAGRQLQCEFSPVTRWKTAICGLFDRQKCPKGKHCNFLHV 361
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Sea Lamprey
Match: zrsr2 (zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495])

HSP 1 Score: 106.686 bits (265), Expect = 1.173e-26
Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTA-DGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            +GTE+D+ +C F+ K GACR G+ CSRLH +P+ S T+LL++++ AP    Q   D   S+  + + + +  +     F    +    R G + +  V  N   HL GNVY+++  EE+A +A    N RW+ GR ++ E  PV+ ++ A C  Y+   C +G  CNF+H+
Sbjct:  153 YGTERDRAHCPFFLKTGACRFGDRCSRLHVRPSRSATLLLRSMF-APFGLDQARCDDYDSDAGLELGD-DDLRRQFRDFYRDALPELRRPGRVRQFKVSCNFEPHLRGNVYVQYETEEEAMQAFQMFNGRWYAGRQINCEFCPVSRWKSAICGLYDRRRCPKGKSCNFLHV 321
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Nematostella
Match: EDO38373 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SD33])

HSP 1 Score: 281.182 bits (718), Expect = 2.935e-96
Identity = 149/190 (78.42%), Postives = 172/190 (90.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTILLQN+Y  PQ+ AQ ADG+ +    ++S+VEAQ+ +D FFE+VF+E EE+YGEIEEMNVCDNLGDHLVGNVY+KFR EEDAEKAV +LNNRW+ G+P++AELSPVTDFREACC QYE GECTRGGFCNFMHL+PISR++RR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILLQNMYQNPQSAAQVADGTSN----AISDVEAQEHYDRFFEDVFLELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVNDLNNRWYNGQPIYAELSPVTDFREACCRQYEMGECTRGGFCNFMHLRPISRDVRRELY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Nematostella
Match: EDO39380 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAD9])

HSP 1 Score: 60.4622 bits (145), Expect = 1.199e-10
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLY 194
            FGTE+D VNC+FY K G+CR GE CSR H +P  S T+L+  +Y
Sbjct:  189 FGTEQDTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMY 232
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Nematostella
Match: EDO29139 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T4H3])

HSP 1 Score: 52.7582 bits (125), Expect = 1.995e-8
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 3 
Query:   78 DKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLY 194
            D VNC+FY K G+CR GE CSR H +P  S T+L+  +Y
Sbjct:  162 DTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLLIPGMY 200
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Nematostella
Match: EDO39379 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAD7])

HSP 1 Score: 49.6766 bits (117), Expect = 4.922e-7
Identity = 22/58 (37.93%), Postives = 33/58 (56.90%), Query Frame = 3 
Query:  351 VCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQY 524
             C N   HL GNVY++F+ EE   +A    N RW+  + +  E SPVT ++ A C ++
Sbjct:   37 ACCNYEPHLRGNVYVQFKDEESCARAFAAFNGRWYAQKQLSCEFSPVTRWKSAICDRF 94
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Medaka
Match: ENSORLT00000011113.2 (splicing factor U2AF 35 kDa subunit [Source:NCBI gene;Acc:101158751])

HSP 1 Score: 289.271 bits (739), Expect = 3.455e-99
Identity = 155/191 (81.15%), Postives = 172/191 (90.05%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTIL+QN+Y  PQN+AQTAD S      ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY 
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADASR----CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYG 187
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Medaka
Match: ENSORLT00000007778.2 (splicing factor U2AF 35 kDa subunit [Source:NCBI gene;Acc:101158751])

HSP 1 Score: 288.886 bits (738), Expect = 1.078e-98
Identity = 155/190 (81.58%), Postives = 172/190 (90.53%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLY 608
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQTIL+QN+Y  PQN+AQTAD S      ++S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFRREEDAEKAV +LNNRWF G+P+HAELSPVTDFREACC QYE GECTRGGFCNFMHLKPISRELRR+LY
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQTADASR----CAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELY 186
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Medaka
Match: u2af1 (splicing factor U2AF 35 kDa subunit [Source:NCBI gene;Acc:101171784])

HSP 1 Score: 279.641 bits (714), Expect = 4.417e-94
Identity = 148/191 (77.49%), Postives = 169/191 (88.48%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHG+ CSRLHNKPTFSQT+ + N+Y  PQNTAQ+ +G  SN    +S+VE Q+ +D+FFEEVF E EE+YGE+EEMNVCDNLGDHLVGNVY+KFR+EEDAEKA+ +LNNRWF G+P+HAELSPVTDFREACC QYE G CTRGGFCNFMHLKPISR+LRR+LY 
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTVAMLNIYRNPQNTAQSMEGVTSN----VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRKEEDAEKAMLDLNNRWFNGQPIHAELSPVTDFREACCHQYETGGCTRGGFCNFMHLKPISRDLRRQLYG 187
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Medaka
Match: zrsr2 (zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 [Source:NCBI gene;Acc:101174087])

HSP 1 Score: 106.301 bits (264), Expect = 1.276e-25
Identity = 58/170 (34.12%), Postives = 93/170 (54.71%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            +GTE+D  NC F+ K GACR GE CSR H  PT S T++++ +++         D    +  +  SE E        F    +   +  G++ +  VC N   HL GNVYI+F  ++  ++A+ + N RW+ GR +  E+SPVT ++ A C  ++  +C +G  CNF+H+
Sbjct:  167 YGTERDVANCPFFLKTGACRFGERCSRKHVYPTSSPTLMIRGMFMTFGMEQLRRDDYDMDACLEHSE-EDLHESFLEFYHDVLPEFKSVGKVVQFKVCCNYEPHLKGNVYIQFETDDQCKEALMKFNGRWYAGRQLQCEISPVTRWKNAICGLFDRRKCPKGKHCNFLHV 335
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Planmine SMEST
Match: SMESG000034350.1 (SMESG000034350.1)

HSP 1 Score: 346.665 bits (888), Expect = 1.333e-121
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAQQVFDDFFEEVFIECEERYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAQQVFDDFFEEVFIECEERYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 191
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Planmine SMEST
Match: SMESG000034350.1 (SMESG000034350.1)

HSP 1 Score: 331.643 bits (849), Expect = 9.101e-116
Identity = 186/191 (97.38%), Postives = 187/191 (97.91%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 611
            MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSH    +SMSEVEAQQVFDDFFEEVFIECEERYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSH----ISMSEVEAQQVFDDFFEEVFIECEERYGEIEEMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYA 187
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Planmine SMEST
Match: SMESG000002374.1 (SMESG000002374.1)

HSP 1 Score: 254.988 bits (650), Expect = 2.175e-85
Identity = 133/189 (70.37%), Postives = 159/189 (84.13%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKL 605
            MAEYLASIFGTEKDKVNCSFY+KIGACRHG+NCSR+HNKPTFSQT+LL+NLYI P+N A T DGSH    + + E +AQ+ FD+F++E+FIE  ++YGEIEEM VCDNLG+HLVGNVY+ FRREEDAEKA+ +LNNRWFG RP+ AE SPVTDFR+ACC QYE   C+R G CNFMH+K +SRE   +L
Sbjct:    1 MAEYLASIFGTEKDKVNCSFYYKIGACRHGDNCSRIHNKPTFSQTVLLKNLYITPENMALTGDGSH----IFLCEEDAQKKFDEFYQEIFIEINDKYGEIEEMRVCDNLGEHLVGNVYVMFRREEDAEKAINDLNNRWFGKRPIFAEFSPVTDFRDACCAQYELNTCSRAGHCNFMHVKKLSREAENQL 185
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Planmine SMEST
Match: SMESG000002360.1 (SMESG000002360.1)

HSP 1 Score: 119.013 bits (297), Expect = 7.407e-34
Identity = 51/66 (77.27%), Postives = 61/66 (92.42%), Query Frame = 3 
Query:   39 MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSH 236
            MAEYLASIFGTEKDKVNC+F++KIGACRHGE+CSRLHN+PTFSQT+LL+NLY+  +NTA T+  SH
Sbjct:    1 MAEYLASIFGTEKDKVNCTFFYKIGACRHGESCSRLHNQPTFSQTVLLKNLYVTTENTAMTSSMSH 66
[Close]
BLAST of Splicing factor U2AF 35 kDa subunit vs. Planmine SMEST
Match: SMESG000036695.1 (SMESG000036695.1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.128e-21
Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 3 
Query:   63 FGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQNLYIAPQNTAQTADGSHSNFPVSMSEVEAXXXXXXXXXXXXIXXXXXXXXXXXMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSPVTDFREACCTQYENGECTRGGFCNFMHL 572
            F  +  K  C F+ K G CR    CSRLH  P  S TI+  N++ +       A G   +F +   E E    +++F+ ++       +G +  +  C N   HL GNVY+++R   DA  A ++LN R++ G  + A    +  +RE+ C  Y  G+C +GG CNFMH+
Sbjct:  114 FLDQSKKEICHFFRKTGVCRFDLRCSRLHEMPLVSDTIVFMNMFTSNYMEMLMAGGD-PDFSLECDETELINEYEEFYTDIE-TEFSSFGRVLAIRTCRNAMRHLRGNVYVQYRNINDAVYAYSQLNGRYYAGTRLFARFVTLDSWRESICGLYFRGKCPKGGICNFMHV 281
The following BLAST results are available for this feature:
BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
U2AF13.140e-10082.63U2 small nuclear RNA auxiliary factor 1 [Source:HG... [more]
U2AF1L53.140e-10082.63U2 small nuclear RNA auxiliary factor 1 like 5 [So... [more]
U2AF19.994e-9680.00U2 small nuclear RNA auxiliary factor 1 [Source:HG... [more]
U2AF1L59.994e-9680.00U2 small nuclear RNA auxiliary factor 1 like 5 [So... [more]
U2AF1L44.795e-9378.42U2 small nuclear RNA auxiliary factor 1 like 4 [So... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
uaf-28.334e-6661.05U2AF splicing factor [Source:UniProtKB/TrEMBL;Acc... [more]
uaf-28.334e-6661.05U2AF splicing factor [Source:UniProtKB/TrEMBL;Acc... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
U2af389.184e-9780.00gene:FBgn0017457 transcript:FBtr0333408[more]
U2af389.184e-9780.00gene:FBgn0017457 transcript:FBtr0078133[more]
CG32942.433e-820.67gene:FBgn0031628 transcript:FBtr0077381[more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
u2af12.481e-9680.63U2 small nuclear RNA auxiliary factor 1 [Source:ZF... [more]
zrsr21.339e-2634.12zinc finger (CCCH type), RNA-binding motif and ser... [more]
zrsr23.949e-2634.12zinc finger (CCCH type), RNA-binding motif and ser... [more]
CR450764.133.870e-2334.44zinc finger (CCCH type), RNA-binding motif and ser... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
u2af16.073e-6272.90U2 small nuclear RNA auxiliary factor 1 [Source:NC... [more]
u2af11.047e-6173.38U2 small nuclear RNA auxiliary factor 1 [Source:NC... [more]
scgn2.385e-3137.06secretagogin, EF-hand calcium binding protein [Sou... [more]
scgn6.025e-3137.06secretagogin, EF-hand calcium binding protein [Sou... [more]
scgn6.428e-3137.06secretagogin, EF-hand calcium binding protein [Sou... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
U2af12.084e-10082.63U2 small nuclear ribonucleoprotein auxiliary facto... [more]
Gm493964.466e-9781.15predicted gene, 49396 [Source:MGI Symbol;Acc:MGI:6... [more]
Gm493964.466e-9781.15predicted gene, 49396 [Source:MGI Symbol;Acc:MGI:6... [more]
U2af1l44.466e-9781.15U2 small nuclear RNA auxiliary factor 1-like 4 [So... [more]
U2af16.634e-9680.00U2 small nuclear ribonucleoprotein auxiliary facto... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q3T127|U2AF4_BOVIN5.997e-9781.58Splicing factor U2AF 26 kDa subunit OS=Bos taurus ... [more]
sp|Q7TP17|U2AF4_RAT3.124e-9681.15Splicing factor U2AF 26 kDa subunit OS=Rattus norv... [more]
sp|Q8BGJ9|U2AF4_MOUSE3.124e-9681.15Splicing factor U2AF 26 kDa subunit OS=Mus musculu... [more]
sp|Q94535|U2AF1_DROME9.206e-9680.00Splicing factor U2af 38 kDa subunit OS=Drosophila ... [more]
sp|A1A4K8|U2AF1_BOVIN4.337e-9580.00Splicing factor U2AF 35 kDa subunit OS=Bos taurus ... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
Q15ES31.108e-10087.89Putative u2 snRNP auxiliary factor, small subunit ... [more]
C1LIH51.108e-10087.89Splicing factor U2AF 35 kDa subunit OS=Schistosoma... [more]
A0A4E0R4K72.703e-10087.89U2 small nuclear RNA auxiliary factor 1 OS=Fasciol... [more]
A0A4S2LLL73.548e-10087.89Uncharacterized protein OS=Opisthorchis felineus O... [more]
Q5BYB36.315e-9987.77SJCHGC07381 protein (Fragment) OS=Schistosoma japo... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
u2af11.615e-9680.63splicing factor U2AF 35 kDa subunit [Source:NCBI g... [more]
zrsr22.405e-2635.29zinc finger CCCH-type, RNA binding motif and serin... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
zrsr21.173e-2634.50zinc finger (CCCH type), RNA-binding motif and ser... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4
Match NameE-valueIdentityDescription
EDO383732.935e-9678.42Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO393801.199e-1056.82Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO291391.995e-853.85Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO393794.922e-737.93Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ENSORLT00000011113.23.455e-9981.15splicing factor U2AF 35 kDa subunit [Source:NCBI g... [more]
ENSORLT00000007778.21.078e-9881.58splicing factor U2AF 35 kDa subunit [Source:NCBI g... [more]
u2af14.417e-9477.49splicing factor U2AF 35 kDa subunit [Source:NCBI g... [more]
zrsr21.276e-2534.12zinc finger CCCH-type, RNA binding motif and serin... [more]
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BLAST of Splicing factor U2AF 35 kDa subunit vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000034350.11.333e-121100.00SMESG000034350.1[more]
SMESG000034350.19.101e-11697.38SMESG000034350.1[more]
SMESG000002374.12.175e-8570.37SMESG000002374.1[more]
SMESG000002360.17.407e-3477.27SMESG000002360.1[more]
SMESG000036695.14.128e-2132.35SMESG000036695.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30031036 ID=SMED30031036|Name=Splicing factor U2AF 35 kDa subunit|organism=Schmidtea mediterranea sexual|type=transcript|length=814bp
GTTTTAATAAATAATTTTAAAAACCTTAAAAGTAATATATGGCAGAATAT
TTAGCGTCTATTTTTGGTACAGAAAAAGACAAAGTTAATTGTTCTTTTTA
TTTTAAAATTGGTGCTTGTCGCCACGGAGAAAATTGTAGTAGACTACACA
ATAAACCTACTTTCAGTCAAACAATTTTATTACAAAATTTATACATTGCT
CCTCAGAATACAGCACAAACAGCCGATGGATCTCATAGTAATTTTCCAGT
TTCCATGAGTGAGGTTGAAGCGCAGCAGGTATTTGATGATTTTTTCGAAG
AAGTTTTTATCGAATGTGAAGAGCGCTATGGGGAAATCGAAGAAATGAAT
GTTTGTGATAATTTGGGGGACCATCTAGTGGGAAATGTCTATATCAAATT
TCGCCGAGAAGAAGATGCTGAAAAGGCCGTCACTGAATTGAACAATCGTT
GGTTCGGTGGTCGCCCTGTTCATGCAGAGTTATCTCCCGTCACTGATTTT
CGTGAAGCATGTTGCACCCAATACGAGAACGGTGAATGTACACGAGGGGG
ATTTTGTAATTTTATGCATTTGAAACCGATATCAAGAGAATTGCGACGCA
AACTCTATGCACGAAGTAAGAAGCGTTTTCGTCGTCAAAAGTCCCGGTCA
AGAAGTAGAGATAAACGCAGTCCTGATCCTCGAAGGAGGAAATATTCCCG
GTCGCCTAGAAATCGTAAATATTAGTGTATTCAATTTTATCAGGAGAGAT
GAATCGTGTTAATGAGAAAATTTGTTGTAATAAAATACATTTTTTATTTA
TTTTTAAAAAAAAA
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protein sequence of SMED30031036-orf-1

>SMED30031036-orf-1 ID=SMED30031036-orf-1|Name=SMED30031036-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=229bp
MAEYLASIFGTEKDKVNCSFYFKIGACRHGENCSRLHNKPTFSQTILLQN
LYIAPQNTAQTADGSHSNFPVSMSEVEAQQVFDDFFEEVFIECEERYGEI
EEMNVCDNLGDHLVGNVYIKFRREEDAEKAVTELNNRWFGGRPVHAELSP
VTDFREACCTQYENGECTRGGFCNFMHLKPISRELRRKLYARSKKRFRRQ
KSRSRSRDKRSPDPRRRKYSRSPRNRKY*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000429neoblast
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR009145U2AF_small
IPR000571Znf_CCCH
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: cellular component
TermDefinition
GO:0089701U2AF
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: biological process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009145U2 auxiliary factor small subunitPRINTSPR01848U2AUXFACTORcoord: 79..94
score: 45.17
coord: 37..57
score: 48.7
coord: 108..130
score: 60.67
coord: 170..182
score: 65.38
coord: 18..37
score: 75.68
coord: 135..159
score: 59.27
IPR009145U2 auxiliary factor small subunitPANTHERPTHR12620U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITcoord: 1..226
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 50..147
e-value: 1.8E-4
score: 30.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 96..145
e-value: 2.0E-6
score: 27.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 69..151
score: 11.486
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 70..147
e-value: 2.6E-19
score: 80.2
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 153..179
e-value: 0.056
score: 22.6
coord: 13..39
e-value: 0.013
score: 24.6
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 154..178
e-value: 1.6E-6
score: 27.8
coord: 15..38
e-value: 2.5E-6
score: 27.3
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 153..180
score: 11.779
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 12..40
score: 12.277
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 43..150
e-value: 6.0E-35
score: 121.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..228
NoneNo IPR availablePANTHERPTHR12620:SF3SPLICING FACTOR U2AF 26 KDA SUBUNITcoord: 1..226
NoneNo IPR availableCDDcd12538RRM_U2AF35coord: 43..150
e-value: 1.84253E-69
score: 206.048
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 73..154