SMED30031017

Overview
NameSMED30031017
Smed IDSMED30031017
Length (bp)962
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30031017 (SMED30031017) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30031017 (SMED30031017) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30031017 (SMED30031017) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30031017 (SMED30031017) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30031017

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 36

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30031017h1SMcG0002175 SmedASXL_014910SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30031017h1SMcG0002175 SmedASXL_011843SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30031017h1SMcG0002175 SmedASXL_012164SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30031017h1SMcG0002175 SmedASXL_014910SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30031017h1SMcG0002175 SmedASXL_011843SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30031017h1SMcG0002175 SmedASXL_012164SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
neoblastSMED30031017h1SMcG0002175 dd_Smed_v4_10618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30031017h1SMcG0002175 dd_Smed_v4_10618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
posterior sideSMED30031017h1SMcG0002175 dd_Smed_v4_10618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
posterior muscle cellSMED30031017h1SMcG0002175 dd_Smed_v4_10618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30031017h1SMcG0002175 dd_Smed_v4_8531_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30031017h1SMcG0002175 dd_Smed_v4_8531_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30031017h1SMcG0002175 dd_Smed_v4_6173_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30031017h1SMcG0002175 dd_Smed_v4_6173_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30031017h1SMcG0002175 dd_Smed_v4_6173_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30031017h1SMcG0002175 Contig14671newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30031017h1SMcG0002175 Contig14671uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30031017h1SMcG0002175 Contig21759newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30031017h1SMcG0002175 Contig21759uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
neoblastSMED30031017h1SMcG0002175 dd_Smed_v4_10036_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30031017h1SMcG0002175 dd_Smed_v4_10618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30031017h1SMcG0002175 dd_Smed_v4_10618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
posterior sideSMED30031017h1SMcG0002175 dd_Smed_v4_10618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
posterior muscle cellSMED30031017h1SMcG0002175 dd_Smed_v4_10618_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30031017h1SMcG0002175 dd_Smed_v4_8531_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30031017h1SMcG0002175 dd_Smed_v4_8531_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30031017h1SMcG0002175 dd_Smed_v4_6173_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30031017h1SMcG0002175 dd_Smed_v4_6173_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30031017h1SMcG0002175 dd_Smed_v4_6173_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30031017h1SMcG0002175 Contig14671newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30031017h1SMcG0002175 Contig14671uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30031017h1SMcG0002175 Contig21759newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30031017h1SMcG0002175 Contig21759uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
neoblastSMED30031017h1SMcG0002175 dd_Smed_v4_10036_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parapharyngeal regionSMED30031017h1SMcG0002175 dd_Smed_v6_6173_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30031017h1SMcG0002175 dd_Smed_v6_6173_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30031017 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.021117:11153..12113 -4760
v31.009353:3044..4365 +4724
Homology
[Close]
BLAST of SMED30031017 vs. Planmine SMEST
Match: SMESG000045255.1 (SMESG000045255.1)

HSP 1 Score: 553.903 bits (1426), Expect = 0.000e+0
Identity = 306/309 (99.03%), Postives = 307/309 (99.35%), Query Frame = 2 
Query:    2 ASIQRNESRNASGHNNEGRNASIQRNESRNVSGHNTEGINVRGQNNERRNPRSQNFEERNINVQHSENQVGNEQATNDNTENRSATLPXXXXXXXXXXXXXXXXXXXXXXXXXXXAIGDQYDNRQKNGQGVQNRMQYNRGDNFRPNNRRDNVNHTEESNSNHASFKAPFNIQRAFRKSSSPLYGSSIAVNADAERLVESPLLQTCSPTPTGDDILINDNKFEGVVAAGAFVDEVDVSSAMDVEEKLPSDDAETLGKVEDGLAVELEVESIYNVKIDSNLSEIESGSKLIEEIMIIDCDVKEAELEVNGN 928
            ASIQRNESRNASGHNNEGRNASIQRNESRNVSGHNTEGINVRGQNNERRNPRSQNFEERNINVQHSENQVGNEQATNDNTENRSATLPRMNNNHRNEMHNGYRQGYNRNRNNNQNAIGDQYDNRQKNGQGVQNRMQYNRGDNFRPNNRRDNVNHTEESNS HASFKAPFNIQRAFRKSSSPLYGSSIAVNADAERLVESPLLQTCSPTPTGDDILINDNKF+GVVAAGAFVDEVDVSSAMDVEEKLPSDDAETL KVEDGLAVELEVESIYNVKIDSNLSEIESGSKLIEEIMIIDCDVKEAELEVNGN
Sbjct:  536 ASIQRNESRNASGHNNEGRNASIQRNESRNVSGHNTEGINVRGQNNERRNPRSQNFEERNINVQHSENQVGNEQATNDNTENRSATLPRMNNNHRNEMHNGYRQGYNRNRNNNQNAIGDQYDNRQKNGQGVQNRMQYNRGDNFRPNNRRDNVNHTEESNSKHASFKAPFNIQRAFRKSSSPLYGSSIAVNADAERLVESPLLQTCSPTPTGDDILINDNKFKGVVAAGAFVDEVDVSSAMDVEEKLPSDDAETLDKVEDGLAVELEVESIYNVKIDSNLSEIESGSKLIEEIMIIDCDVKEAELEVNGN 844

HSP 2 Score: 89.3521 bits (220), Expect = 2.150e-19
Identity = 53/87 (60.92%), Postives = 62/87 (71.26%), Query Frame = 2 
Query:    2 ASIQRNESRNASGHNNEGRNASIQRNESRNVSGHNTEGINVRGQNNERRNPRSQNFEERNINVQHSENQVGNEQATNDNTENRSATL 262
            ASIQRNESRNASGHNNEGRNASIQRNESRN SGHN EG N   Q NE RN    N E RN ++Q +E++     A+  N E R+A++
Sbjct:  416 ASIQRNESRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESR----NASGHNNEGRNASI 498

HSP 3 Score: 89.3521 bits (220), Expect = 2.150e-19
Identity = 53/87 (60.92%), Postives = 62/87 (71.26%), Query Frame = 2 
Query:    2 ASIQRNESRNASGHNNEGRNASIQRNESRNVSGHNTEGINVRGQNNERRNPRSQNFEERNINVQHSENQVGNEQATNDNTENRSATL 262
            ASIQRNESRNASGHNNEGRNASIQRNESRN SGHN EG N   Q NE RN    N E RN ++Q +E++     A+  N E R+A++
Sbjct:  436 ASIQRNESRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESR----NASGHNNEGRNASI 518

HSP 4 Score: 89.3521 bits (220), Expect = 2.150e-19
Identity = 53/87 (60.92%), Postives = 62/87 (71.26%), Query Frame = 2 
Query:    2 ASIQRNESRNASGHNNEGRNASIQRNESRNVSGHNTEGINVRGQNNERRNPRSQNFEERNINVQHSENQVGNEQATNDNTENRSATL 262
            ASIQRNESRNASGHNNEGRNASIQRNESRN SGHN EG N   Q NE RN    N E RN ++Q +E++     A+  N E R+A++
Sbjct:  456 ASIQRNESRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESR----NASGHNNEGRNASI 538

HSP 5 Score: 89.3521 bits (220), Expect = 2.150e-19
Identity = 53/87 (60.92%), Postives = 62/87 (71.26%), Query Frame = 2 
Query:    2 ASIQRNESRNASGHNNEGRNASIQRNESRNVSGHNTEGINVRGQNNERRNPRSQNFEERNINVQHSENQVGNEQATNDNTENRSATL 262
            ASIQRNESRNASGHNNEGRNASIQRNESRN SGHN EG N   Q NE RN    N E RN ++Q +E++     A+  N E R+A++
Sbjct:  476 ASIQRNESRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESR----NASGHNNEGRNASI 558

HSP 6 Score: 77.411 bits (189), Expect = 2.449e-15
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 2 
Query:   14 RNESRNASGHNNEGRNASIQRNESRNVSGHNTEGINVRGQNNERRNPRSQNFEERNINVQHSENQVGNEQATNDNTENRSATL 262
            R ++RNASGHNNEGRNASIQRNESRN SGHN EG N   Q NE RN    N E RN ++Q +E++     A+  N E R+A++
Sbjct:  400 RTDNRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESRNASGHNNEGRNASIQRNESR----NASGHNNEGRNASI 478
The following BLAST results are available for this feature:
BLAST of SMED30031017 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30031017 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000045255.12.150e-1999.03SMESG000045255.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30031017 ID=SMED30031017|Name=SMED30031017|organism=Schmidtea mediterranea sexual|type=transcript|length=962bp
TGCAAGCATCCAACGGAACGAAAGTAGGAACGCAAGCGGTCACAATAATG
AAGGAAGGAACGCAAGCATACAGCGCAACGAAAGCAGGAACGTAAGTGGT
CACAATACTGAAGGAATAAACGTAAGAGGGCAGAATAATGAAAGAAGAAA
CCCAAGAAGCCAAAACTTTGAAGAAAGAAATATAAACGTTCAACACAGTG
AAAATCAAGTAGGAAATGAGCAGGCCACAAATGATAACACAGAGAATCGC
AGTGCTACATTGCCACGAATGAATAATAACCATCGGAATGAAATGCATAA
TGGATATCGCCAGGGATACAATCGTAACAGAAACAACAACCAAAACGCTA
TCGGCGATCAGTACGACAACAGGCAGAAAAATGGACAAGGGGTGCAGAAT
AGGATGCAATACAATAGAGGAGACAATTTCCGACCGAATAACCGCCGGGA
CAATGTCAACCACACCGAAGAAAGCAACTCAAATCACGCATCATTCAAAG
CACCATTTAATATCCAGCGGGCATTCAGAAAAAGTAGTTCTCCTTTGTAT
GGATCATCGATCGCAGTCAATGCTGACGCTGAAAGGCTGGTGGAATCGCC
ACTGTTGCAGACATGCTCTCCGACACCGACTGGCGATGATATATTGATTA
ATGATAACAAATTTGAAGGAGTAGTGGCAGCAGGGGCTTTCGTCGATGAG
GTCGATGTATCTTCCGCAATGGACGTTGAAGAAAAATTACCATCGGATGA
TGCAGAGACACTCGGCAAAGTGGAGGATGGACTAGCAGTGGAATTGGAGG
TTGAATCGATTTACAATGTGAAAATCGATTCAAATCTATCAGAAATCGAA
TCCGGATCGAAATTGATCGAAGAAATAATGATAATCGATTGTGATGTCAA
GGAAGCGGAATTGGAAGTCAATGGAAACGAAAAGAAGACGGAAATTGAAG
AAAATAAGCCGG
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protein sequence of SMED30031017-orf-1

>SMED30031017-orf-1 ID=SMED30031017-orf-1|Name=SMED30031017-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=320bp
ASIQRNESRNASGHNNEGRNASIQRNESRNVSGHNTEGINVRGQNNERRN
PRSQNFEERNINVQHSENQVGNEQATNDNTENRSATLPRMNNNHRNEMHN
GYRQGYNRNRNNNQNAIGDQYDNRQKNGQGVQNRMQYNRGDNFRPNNRRD
NVNHTEESNSNHASFKAPFNIQRAFRKSSSPLYGSSIAVNADAERLVESP
LLQTCSPTPTGDDILINDNKFEGVVAAGAFVDEVDVSSAMDVEEKLPSDD
AETLGKVEDGLAVELEVESIYNVKIDSNLSEIESGSKLIEEIMIIDCDVK
EAELEVNGNEKKTEIEENKP
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000420parapharyngeal region
PLANA:0000429neoblast
PLANA:0003116parenchymal cell
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 63..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..161