Zinc finger, C2H2-like protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Homology
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Human
Match: ZFR2 (zinc finger RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:29189]) HSP 1 Score: 50.0618 bits (118), Expect = 5.206e-6 Identity = 30/111 (27.03%), Postives = 48/111 (43.24%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPS 528 CD+C I+C+ TY H+ G+KH K K+ + N G ++ L C++C V+C + H+ GS+H+K L +R + DPS Sbjct: 273 CDICKISCAGPQTYREHLGGQKHRK----KEAAQKTGVQPNGSPRG-----------------VQAQLHCDLCAVSCTGADAYAAHIRGSKHQKGLLSHR----QQAADPS 358
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Fly
Match: Zn72D (gene:FBgn0263603 transcript:FBtr0075493) HSP 1 Score: 49.6766 bits (117), Expect = 5.261e-6 Identity = 28/102 (27.45%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYI 501 C+VC I+C+ TY H++G+KH K + + + +A+ + GN N CE+CDV C + H+ G++H+K +KL++ + Sbjct: 207 CEVCKISCAGPQTYREHLEGQKHKKREASLKMSASANSATQNR--GN-------------------NYHCELCDVTCTGTDAYAAHVRGAKHQKVVKLHQKL 287
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Fly
Match: Zn72D (gene:FBgn0263603 transcript:FBtr0333293) HSP 1 Score: 49.2914 bits (116), Expect = 5.340e-6 Identity = 28/102 (27.45%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYI 501 C+VC I+C+ TY H++G+KH K + + + +A+ + GN N CE+CDV C + H+ G++H+K +KL++ + Sbjct: 207 CEVCKISCAGPQTYREHLEGQKHKKREASLKMSASANSATQNR--GN-------------------NYHCELCDVTCTGTDAYAAHVRGAKHQKVVKLHQKL 287
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Fly
Match: Zn72D (gene:FBgn0263603 transcript:FBtr0333294) HSP 1 Score: 49.2914 bits (116), Expect = 7.188e-6 Identity = 28/102 (27.45%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYI 501 C+VC I+C+ TY H++G+KH K + + + +A+ + GN N CE+CDV C + H+ G++H+K +KL++ + Sbjct: 207 CEVCKISCAGPQTYREHLEGQKHKKREASLKMSASANSATQNR--GN-------------------NYHCELCDVTCTGTDAYAAHVRGAKHQKVVKLHQKL 287
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Fly
Match: Zn72D (gene:FBgn0263603 transcript:FBtr0310582) HSP 1 Score: 49.2914 bits (116), Expect = 7.188e-6 Identity = 28/102 (27.45%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYI 501 C+VC I+C+ TY H++G+KH K + + + +A+ + GN N CE+CDV C + H+ G++H+K +KL++ + Sbjct: 207 CEVCKISCAGPQTYREHLEGQKHKKREASLKMSASANSATQNR--GN-------------------NYHCELCDVTCTGTDAYAAHVRGAKHQKVVKLHQKL 287
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Fly
Match: Zn72D (gene:FBgn0263603 transcript:FBtr0310581) HSP 1 Score: 49.2914 bits (116), Expect = 7.188e-6 Identity = 28/102 (27.45%), Postives = 50/102 (49.02%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYI 501 C+VC I+C+ TY H++G+KH K + + + +A+ + GN N CE+CDV C + H+ G++H+K +KL++ + Sbjct: 207 CEVCKISCAGPQTYREHLEGQKHKKREASLKMSASANSATQNR--GN-------------------NYHCELCDVTCTGTDAYAAHVRGAKHQKVVKLHQKL 287
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Zebrafish
Match: zfr2 (zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]) HSP 1 Score: 54.299 bits (129), Expect = 2.749e-7 Identity = 29/99 (29.29%), Postives = 50/99 (50.51%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CD+C I+C+ TY H++G+KH K ++ ++G +N G ++ L CE+CDV+C + H+ GS+H+K +KL+ Sbjct: 322 CDICKISCAGPQTYREHLEGQKHKK---KEAAQKSGSQVTN------------------GPRGVQTQLRCELCDVSCTGADAYAAHIRGSKHQKVVKLH 399
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Zebrafish
Match: zfr (zinc finger RNA binding protein [Source:NCBI gene;Acc:321659]) HSP 1 Score: 51.2174 bits (121), Expect = 2.229e-6 Identity = 32/99 (32.32%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CDVC I+C+ TY H++G+KH K K A+ KV + S +G +++ L CE+CDV+C + H+ G++H+K +KL+ Sbjct: 304 CDVCKISCAGPQTYKEHLEGQKHKK-----------KEAA-LKVSQSSSSSSGGGSSARG---TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLH 387
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Zebrafish
Match: zfr (zinc finger RNA binding protein [Source:NCBI gene;Acc:321659]) HSP 1 Score: 51.2174 bits (121), Expect = 2.318e-6 Identity = 32/99 (32.32%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CDVC I+C+ TY H++G+KH K K A+ KV + S +G +++ L CE+CDV+C + H+ G++H+K +KL+ Sbjct: 326 CDVCKISCAGPQTYKEHLEGQKHKK-----------KEAA-LKVSQSSSSSSGGGSSARG---TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLH 409
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Zebrafish
Match: zfr (zinc finger RNA binding protein [Source:NCBI gene;Acc:321659]) HSP 1 Score: 51.2174 bits (121), Expect = 2.524e-6 Identity = 32/99 (32.32%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CDVC I+C+ TY H++G+KH K K A+ KV + S +G +++ L CE+CDV+C + H+ G++H+K +KL+ Sbjct: 326 CDVCKISCAGPQTYKEHLEGQKHKK-----------KEAA-LKVSQSSSSSSGGGSSARG---TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLH 409
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Xenopus
Match: ca12 (carbonic anhydrase XII [Source:Xenbase;Acc:XB-GENE-1015246]) HSP 1 Score: 57.7658 bits (138), Expect = 3.024e-8 Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CDVC I+C+ TY H++G+KH K + +N T+S+ V G +++ L CE+CDV+C + H+ G++H+K +KL+ Sbjct: 326 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQN-TTSSSTAVRG-----------------TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLH 406
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Xenopus
Match: ca12 (carbonic anhydrase XII [Source:Xenbase;Acc:XB-GENE-1015246]) HSP 1 Score: 57.3806 bits (137), Expect = 4.356e-8 Identity = 31/98 (31.63%), Postives = 51/98 (52.04%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKL 489 CDVC I+C+ TY H++G+KH K + +N T+S+ V G +++ L CE+CDV+C + H+ G++H+K +KL Sbjct: 311 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQN-TTSSSTAVRG-----------------TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKL 390
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Xenopus
Match: ca12 (carbonic anhydrase XII [Source:Xenbase;Acc:XB-GENE-1015246]) HSP 1 Score: 57.3806 bits (137), Expect = 4.360e-8 Identity = 31/98 (31.63%), Postives = 51/98 (52.04%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKL 489 CDVC I+C+ TY H++G+KH K + +N T+S+ V G +++ L CE+CDV+C + H+ G++H+K +KL Sbjct: 334 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQN-TTSSSTAVRG-----------------TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKL 413
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Xenopus
Match: ca12 (carbonic anhydrase XII [Source:Xenbase;Acc:XB-GENE-1015246]) HSP 1 Score: 57.3806 bits (137), Expect = 4.437e-8 Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CDVC I+C+ TY H++G+KH K + +N T+S+ V G +++ L CE+CDV+C + H+ G++H+K +KL+ Sbjct: 326 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQN-TTSSSTAVRG-----------------TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLH 406
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Xenopus
Match: ca12 (carbonic anhydrase XII [Source:Xenbase;Acc:XB-GENE-1015246]) HSP 1 Score: 57.3806 bits (137), Expect = 4.474e-8 Identity = 31/98 (31.63%), Postives = 51/98 (52.04%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKL 489 CDVC I+C+ TY H++G+KH K + +N T+S+ V G +++ L CE+CDV+C + H+ G++H+K +KL Sbjct: 333 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQN-TTSSSTAVRG-----------------TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKL 412
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Mouse
Match: Zfr2 (zinc finger RNA binding protein 2 [Source:MGI Symbol;Acc:MGI:2143792]) HSP 1 Score: 55.0694 bits (131), Expect = 1.502e-7 Identity = 55/240 (22.92%), Postives = 94/240 (39.17%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYI--ELRNNKDPSVFCDICESFMNEESMNMHRASGKH---------KRKSSAEVKDEPAEKK---ARSAD-IPT--TVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWCDVCQISFTNQSFLDLHLTGFKH 864 C+VC ++C+ TY H++G+KH K K + T + G+ +L C +C V+C + H+ G+RH+K KL+ + + + P S E+ H A +H K SA + P E + R D P+ VE +S +A T+ ++ + C +C+ SF +++ D+HLTG +H Sbjct: 207 CEVCRVSCAGPQTYRDHLEGQKHRK----KQAAQRTSTQPSGGPRGSQ------------------SLHCGLCAVSCTGADAYAAHMRGARHQKVFKLHTRLGKPIPSEPTPRSVTYTRGSDSTPETSVKHEAHARHSSHTQGRPAPAKGSAASRKGPPELQTMHGRPGDRRPSHFKVEATRGGPGEASGSSGDMAPVGTEYVEEVCSDEGKVIRFRCKLCECSFNDRNARDMHLTGRRH 424
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Mouse
Match: Zfp346 (zinc finger protein 346 [Source:MGI Symbol;Acc:MGI:1349417]) HSP 1 Score: 50.0618 bits (118), Expect = 2.455e-6 Identity = 44/153 (28.76%), Postives = 62/153 (40.52%), Query Frame = 1 Query: 190 VQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKL----NRYIELRNNK---DPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVK 627 QC VC S++ H + KKH + R L +G V+ D SDQ+ N C IC++ P + H G H K LKL + L+ N+ DP FC +C S N+ +M GK RK ++K Sbjct: 73 TQCKVCCAMLISESQKLAHYQSKKHANKVKRY-LAIHGMETIKGDVKRLD-------SDQKSSRSKDKNHCCPICNMTFSSPAVAQSHYLGKTHAKSLKLKQQSTKGAALQQNREMLDPDKFCSLCHSTFNDPAMAQQHYMGKRHRKQETKLK 217
BLAST of Zinc finger, C2H2-like protein vs. UniProt/SwissProt
Match: sp|Q5U231|ZFR_XENTR (Zinc finger RNA-binding protein OS=Xenopus tropicalis OX=8364 GN=zfr PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 2.370e-7 Identity = 31/98 (31.63%), Postives = 51/98 (52.04%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKL 489 CDVC I+C+ TY H++G+KH K + +N T+S+ V G +++ L CE+CDV+C + H+ G++H+K +KL Sbjct: 333 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQN-TTSSSTAVRG-----------------TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKL 412
BLAST of Zinc finger, C2H2-like protein vs. UniProt/SwissProt
Match: sp|Q6GPM1|ZFR_XENLA (Zinc finger RNA-binding protein OS=Xenopus laevis OX=8355 GN=zfr PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.490e-7 Identity = 31/99 (31.31%), Postives = 52/99 (52.53%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CDVC I+C+ TY H++G+KH K + +N T+S+ V G +++ L CE+CDV+C + H+ G++H+K +KL+ Sbjct: 324 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQN-TTSSSTAVRG-----------------TQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLH 404
BLAST of Zinc finger, C2H2-like protein vs. TrEMBL
Match: A0A1I8F384 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.279e-12 Identity = 74/274 (27.01%), Postives = 110/274 (40.15%), Query Frame = 1 Query: 283 KDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEV-------KDEPAEKKARSADI---------------PTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFEL------------------------WCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEG-AFGERLMKMRAKLQSLKQSR 963 K F NG +N+ V PV+ CE+CD C + H EGS+H KK K ++ EL KDP V+CDIC ++ E M HRA KH++ ++ + K P K A I P + + A+ A A TQ+ A+ + RS+ EL C+VC I+ T+Q ++ HL G++H +R G PEG F + MK + + S ++ R Sbjct: 66 KRKFNNGLGRNNSSVVVAPQRPPVQ------------QFHCELCDAKCTGEAMFKLHREGSKHLKKEKEKKFRELSEAKDPEVYCDICNLTLHPELMKSHRAGVKHRKAAAGALNRGGSGAKKSPTGKSALPPGIYRLDPAKSAADKDKPPGGATEASSSSAANETAATADAQNGTQQQAI--STRSKRAELHFNSKAHRMAFQKLQRDQIRSKGFVCEVCDIAVTSQDLMEAHLKGYRHALR-QHGGYIPEGHEFYAKYMKRQEAMLSYRKIR 324
BLAST of Zinc finger, C2H2-like protein vs. TrEMBL
Match: A0A1B6KD30 (Uncharacterized protein OS=Graphocephala atropunctata OX=36148 GN=g.23702 PE=4 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.912e-11 Identity = 69/268 (25.75%), Postives = 117/268 (43.66%), Query Frame = 1 Query: 190 VQCDVCNITCSSQTTYDFHIKGKKHTKALSRK---------------DLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVF-CDICE-SFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRS---RNFELWCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEGAFGERLMKMR 933 ++CD C++ SQ H+ KKH K + + D+ N + ++G D VE + + + CEIC++ + +QL+ HL G +H++K +E N K+ F C++C+ +++E + +H A KHK K AE ++ + +A D P C C +SL H +++H + R N ++ CDVC +SFT+ H+ G KH + N+ A G MR Sbjct: 233 IKCDFCDVRFVSQDQLLVHLASKKHQKKVEKPIPKVEEFQVFDCKICDVKVNSQDQLQIHLDGKKHKDKVEKAKPKAEQFQ--GFECEICEIKVVSQDQLQIHLAGKKHKEK------VEKANPKEEVWFQCELCDVKAVSQEQLQIHLAGKKHKDK--AEKRNVNSSSEAEKPDRPFK---CDICEVSLSTKDLFELHTYSKRHVKALLKREMLESNTDV-CDVCNLSFTSIEHYQAHIQGRKHQKKCKETNNTLMTAPGSHGTCMR 486 HSP 2 Score: 64.3142 bits (155), Expect = 3.078e-7 Identity = 73/301 (24.25%), Postives = 122/301 (40.53%), Query Frame = 1 Query: 148 QYRSPYVTNKKTIPVQ---CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRK----------KLKLNRYIELRNNK-------------DPSV--------FCDICESFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTN---RSRNFELW-CDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEGAFGERLMKMRA 936 QYRS + TI Q C +C + SS H GK+H K ++R GKT S M +E + + ++ CE+CDV + H G HRK K K+ I++ N++ P V FCD+ F++++ + +H AS KH++K + P ++ + D C C + + + H +KH + ++ F+ + C++C+I +Q L +HL G KH +V + N E F L ++A Sbjct: 84 QYRSSSYPKELTILFQALDCRLCLVELSSPIVAKMHYSGKQHMKKVTRFLTEWCGKTGS--------AMPQIEEVTVASRTTAFADY-CELCDVRMITTNDKMLHYTGKNHRKNEKDPDNAKKKKKVYDTIDVSNSRFGIGADFSTEEEEKPKVEFQVIKCDFCDV--RFVSQDQLLVHLASKKHQKKVEKPI---PKVEEFQVFD-------CKICDVKVNSQDQLQIHLDGKKHKDKVEKAKPKAEQFQGFECEICEIKVVSQDQLQIHLAGKKHKEKVEKANPKEEVWFQCELCDVKA 363
BLAST of Zinc finger, C2H2-like protein vs. TrEMBL
Match: A0A146LF11 (Zinc finger protein 346 OS=Lygus hesperus OX=30085 GN=znf346_1 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.187e-11 Identity = 55/216 (25.46%), Postives = 94/216 (43.52%), Query Frame = 1 Query: 187 PVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDL--FENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVF--------CDICESFMNEESMNMHRASG-KHKRKSSAEVKDEPAEKKARSADIPTTVE-HCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWC 798 P++CD+CN+ C +Y H++G++H L + D NG+T AK G +L + + CE+CD+ CL EQLE HL+G +H K+ K+ E+ + P + C IC + + + + SG KH+RK+ K PT C C + + +++ + K +L ++ + WC Sbjct: 27 PIKCDLCNVWCQGVVSYQSHLQGRQHFANLKKPDGDGEANGQTPKKAK------------KRPSGTVLEE--VRCEVCDLTCLGKEQLEVHLQGIKHAKRAKMTEKEEIDISTLPFIKELGGKAYQCTICNVEVTGKLVVISHISGAKHQRKADPNTPKIEITGKNNKTTTPTGEPLECKVCKLPV----NSLFQLEEHKRSLKHKHKEEAYNKWC 224
BLAST of Zinc finger, C2H2-like protein vs. TrEMBL
Match: A0A3B6RI48 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.150e-11 Identity = 70/285 (24.56%), Postives = 118/285 (41.40%), Query Frame = 1 Query: 97 NHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDC----------------------MDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSV---FCDICESFMNEES-MNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFEL--W-CDVCQISFTNQSFLDLHLTGFKH 864 NH H+ AL + P V+ C +CN C+SQ+ + H++G++H + + + L +GK + +V G C + +E + G+ S MC IC+ NC E H G RH++ ++ + +KDP V CDIC + +S H +H+ A+ +D D + C C+ + + SD +H + ++H N+ + E W CD+C + T+QS L HL G +H Sbjct: 245 NHLRGRRHQQNIEALQGDGKDPEVSR-----WMCSICNANCTSQSDLESHLRGRRHQENI--EALQGDGK---DPEVSGWMCDICNANCTSQSDXXXXXXXXXHQEKIEALEGDGKDPEVSRWMCYICNANCTSQSDFESHFRGRRHQENIEALQG----GDKDPEVSRWMCDICNANCTSQSDFESHLRGRRHQENIEAQQRD--------GKDPELSRWMCDICNANCTSQSDFESHLRGRRHQENIEADDKGTEASRWMCDICNANCTSQSDLKSHLRGRRH 507 HSP 2 Score: 70.4774 bits (171), Expect = 3.922e-9 Identity = 62/248 (25.00%), Postives = 101/248 (40.73%), Query Frame = 1 Query: 160 PYVTNKKTIPVQ---CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSV---FCDICESFMNEES-MNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKH-----ALNMTNRSRNFELW-CDVCQISFTNQSFLDLHLTGFKH 864 P + +K P+ C +C+ C+SQ+ H++G++H + N + D DP S MC IC+ NC LE HL G RH++ ++ + + KDP V CDIC + +S H+ K A D D + C C+ + + SD +H++ ++H AL ++ W CD+C + T+QS + HL G +H Sbjct: 215 PQLADKNLKPMPTWFCSICDANCTSQSDLKNHLRGRRHQQ---------------NIEALQGDGKDP-----------EVSRWMCSICNANCTSQSDLESHLRGRRHQENIEALQG----DGKDPEVSGWMCDICNANCTSQSDXXXXXXXXXHQEKIEALEGD--------GKDPEVSRWMCYICNANCTSQSDFESHFRGRRHQENIEALQGGDKDPEVSRWMCDICNANCTSQSDFESHLRGRRH 424 HSP 3 Score: 63.1586 bits (152), Expect = 7.751e-7 Identity = 57/249 (22.89%), Postives = 99/249 (39.76%), Query Frame = 1 Query: 22 VSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEES-MNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNM 765 VS + C CN + Q F +H H+ AL + P V+ CD+CN C+SQ+ ++ H++G++H + N + + D DP S MC+IC+ NC E HL G RH++ ++ + + + CDIC + +S + H +H+ A D + +R C C+ + + SD +H + ++H N+ Sbjct: 354 VSRWMCYICNANCTS-----QSDFESHFRGRRHQENIEALQGGDKDPEVSR-----WMCDICNANCTSQSDFESHLRGRRHQE---------------NIEAQQRDGKDP-----------ELSRWMCDICNANCTSQSDFESHLRGRRHQENIEADD----KGTEASRWMCDICNANCTSQSDLKSHLRGRRHQENIEALQGDGKGTEVSRWM--------CNICNANCLSRSDFESHIRGRRHQSNL 554
BLAST of Zinc finger, C2H2-like protein vs. TrEMBL
Match: A0A0K8T0Q1 (C2H2-type domain-containing protein OS=Lygus hesperus OX=30085 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.151e-11 Identity = 54/216 (25.00%), Postives = 94/216 (43.52%), Query Frame = 1 Query: 187 PVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLF--ENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVF--------CDICESFMNEESMNMHRASG-KHKRKSSAEVKDEPAEKKARSADIPTTVE-HCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWC 798 P++CD+CN+ C +Y H++G++H L + + NG+T AK G +L + + CE+CD+ CL EQLE HL+G +H K+ K+ E+ + P + C IC + + + + SG KH+RK+ K PT C C + + +++ + K +L ++ + WC Sbjct: 27 PIKCDLCNVWCQGVVSYQSHLQGRQHFANLKKPEGVGEANGQTPKKAK------------KRPSGTVLEE--VRCEVCDLTCLGKEQLEVHLQGIKHAKRAKMTEKEEIDISTLPFIKELGGKAYQCTICNVEVTGKLVVISHISGAKHQRKADPNTPKIEITGKNNKTTTPTGEPLECKVCKLPV----NSLFQLEEHKRSLKHKHKEEAYNKWC 224
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Cavefish
Match: zfr2 (zinc finger RNA-binding protein-like [Source:NCBI gene;Acc:103035531]) HSP 1 Score: 58.5362 bits (140), Expect = 9.507e-9 Identity = 61/260 (23.46%), Postives = 99/260 (38.08%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVK---------------DEPAEKKARS----------ADIPTTVEHCGYCHMSLKNASD-------AIAHYQTQKHALNMTNRSRN-----FELWCDVCQISFTNQSFLDLHLTGFKH 864 CD+C I+C+ TY H++G+KH K + + ++G A+N G ++ L CE+CDV+C + H+ G++H+K +KL+ + PS +N + + SGK + A +PA+K A S A P VE ++ SD A Q H + RN C +C+ SF + + D+HL G +H Sbjct: 315 CDICKISCAGPQTYREHLEGQKHKKKEASQ---KSGSQATNGPRGG-----------------VQTQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKL---GKPIPSTE----PVLVNSAPVPVTTTSGKPTAPAVAPASPRVPQKPIEPNPTKGPQPAKKPALSKASVIANKAAAPEPVKVEEVKLAVLNQDPLSDDEGDSCGAQGDIQPVGH--DYVEEVRNDDGKVIRFHCKLCECSFNDPNAKDMHLKGRRH 545
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Cavefish
Match: znf346 (zinc finger protein 346 [Source:NCBI gene;Acc:103029588]) HSP 1 Score: 50.447 bits (119), Expect = 1.419e-6 Identity = 44/148 (29.73%), Postives = 60/148 (40.54%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGK--TASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVF---------CDICESFMNE-ESMNMHRASGKHK 603 C VCN+T SS + H +GK H K L K+L AKV D V+ + GQ N C IC + P ++H EG +H+K L + +E PS C +C +N E H + KHK Sbjct: 99 CTVCNMTFSSAVVAESHYQGKVHAKNLKLKNLGPQTPVFVQPKAKVNKGD----VQTAGGPGQ---DPNRFCSICQASFNNPLMAQQHYEGKKHKKHLTKQKLMETYG---PSTAPASTLKGYPCTVCNIELNSVEQYQAHISGSKHK 236
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Cavefish
Match: znf346 (zinc finger protein 346 [Source:NCBI gene;Acc:103029588]) HSP 1 Score: 50.447 bits (119), Expect = 1.766e-6 Identity = 44/148 (29.73%), Postives = 60/148 (40.54%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGK--TASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVF---------CDICESFMNE-ESMNMHRASGKHK 603 C VCN+T SS + H +GK H K L K+L AKV D V+ + GQ N C IC + P ++H EG +H+K L + +E PS C +C +N E H + KHK Sbjct: 99 CTVCNMTFSSAVVAESHYQGKVHAKNLKLKNLGPQTPVFVQPKAKVNKGD----VQTAGGPGQ---DPNRFCSICQASFNNPLMAQQHYEGKKHKKHLTKQKLMETYG---PSTAPASTLKGYPCTVCNIELNSVEQYQAHISGSKHK 236
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Cavefish
Match: zfr (zinc finger RNA binding protein [Source:NCBI gene;Acc:103021415]) HSP 1 Score: 50.447 bits (119), Expect = 3.489e-6 Identity = 32/99 (32.32%), Postives = 51/99 (51.52%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CDVC I+C+ TY H++G+KH K K A+ KV + S +G +++ L CE+CDV C + H+ G++H+K +KL+ Sbjct: 303 CDVCKISCAGPQTYKEHLEGQKHKK-----------KEAA-LKVSQSSSSSSGGSSSARG---TQNQLRCELCDVACTGADAYAAHIRGAKHQKVVKLH 386
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003273.1 (pep scaffold:Pmarinus_7.0:GL476625:194967:224286:-1 gene:ENSPMAG00000002991.1 transcript:ENSPMAT00000003273.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 46.595 bits (109), Expect = 6.961e-6 Identity = 28/103 (27.18%), Postives = 45/103 (43.69%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASN-------AKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKL 483 C +C + +SQ+ D H G +H L KD+ +G+ AK G+ P + N C++CDV QL++H++ RH+ KL Sbjct: 166 CTICKVAVNSQSQLDAHNNGARHKATLEGKDVRASGRPFPRHMGRNKAAKATGSMPGTPTK------------NFQCQLCDVKVNSEVQLQQHIKSRRHKDKL 256
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Medaka
Match: zfr (zinc finger RNA binding protein [Source:NCBI gene;Acc:101166968]) HSP 1 Score: 50.447 bits (119), Expect = 3.328e-6 Identity = 30/102 (29.41%), Postives = 47/102 (46.08%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTK---ALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CDVC I+C+ TY H++G+KH K AL + + A+ N L CE+CDV+C + H+ G++H+K +KL+ Sbjct: 322 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSSSTGGGAMARSAQN-------------------QLRCELCDVSCTGADAYAAHIRGAKHQKVVKLH 404
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Medaka
Match: zfr (zinc finger RNA binding protein [Source:NCBI gene;Acc:101166968]) HSP 1 Score: 50.447 bits (119), Expect = 3.395e-6 Identity = 30/102 (29.41%), Postives = 47/102 (46.08%), Query Frame = 1 Query: 196 CDVCNITCSSQTTYDFHIKGKKHTK---ALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLN 492 CDVC I+C+ TY H++G+KH K AL + + A+ N L CE+CDV+C + H+ G++H+K +KL+ Sbjct: 322 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSSSTGGGAMARSAQN-------------------QLRCELCDVSCTGADAYAAHIRGAKHQKVVKLH 404
BLAST of Zinc finger, C2H2-like protein vs. Planmine SMEST
Match: SMESG000067725.1 (SMESG000067725.1) HSP 1 Score: 695.656 bits (1794), Expect = 0.000e+0 Identity = 333/344 (96.80%), Postives = 335/344 (97.38%), Query Frame = 1 Query: 1 MNNMYDNVSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEGAFGERLMKMRAKLQSLKQSRKEKKSSNDEKCSIVPSEQPQNEP 1032 MNNMYDNVSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEGAFGERLMKMRAKLQSLKQSRKEKKSSNDEK + P + P Sbjct: 1 MNNMYDNVSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEGAFGERLMKMRAKLQSLKQSRKEKKSSNDEKRQLCPVRNRKMSP 344
BLAST of Zinc finger, C2H2-like protein vs. Planmine SMEST
Match: SMESG000067725.1 (SMESG000067725.1) HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0 Identity = 330/341 (96.77%), Postives = 332/341 (97.36%), Query Frame = 1 Query: 10 MYDNVSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEGAFGERLMKMRAKLQSLKQSRKEKKSSNDEKCSIVPSEQPQNEP 1032 MYDNVSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEGAFGERLMKMRAKLQSLKQSRKEKKSSNDEK + P + P Sbjct: 1 MYDNVSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEGAFGERLMKMRAKLQSLKQSRKEKKSSNDEKRQLCPVRNRKMSP 341
BLAST of Zinc finger, C2H2-like protein vs. Planmine SMEST
Match: SMESG000074376.1 (SMESG000074376.1) HSP 1 Score: 520.005 bits (1338), Expect = 0.000e+0 Identity = 253/345 (73.33%), Postives = 285/345 (82.61%), Query Frame = 1 Query: 1 MNNMYDNVSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDC-MDPVEYSD--QQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPEGAFGERLMKMRAKLQSLKQSRKEKKSSNDEKCSIVPSEQPQN 1026 M+N Y N+SSY CVACNIYFNNFDEQKQH F HS S+DHESL S+LYSQYR TNKK IPVQCD CNI+CSSQTTYDFHIKGK+HTK L++K L E K + E N D V+ QQ QIL K NLMCEIC VNC PEQ E+HLEG RH+K+LKLNRYIEL+NNKDPSV+CDIC+ MNE+SM +HRASGKHKRKS+ EVKDEPAEKK ++ADI TTVEHCGYCH+SLK+A+DAIAHYQTQKHALNMTNRSRN+ELWC +CQISFTNQ+FLDLHL GFKHFVR+NRGN APEGAFGERL+KMRAKLQ+LKQSRK KKSSN C I+ +EQ QN Sbjct: 1 MHNSYVNLSSYRCVACNIYFNNFDEQKQHYFTYHSRSFDHESLTSSLYSQYRPLSATNKKVIPVQCDACNISCSSQTTYDFHIKGKRHTKTLTKKALSEIDKATNFTNFEENRISTDSVQIPAIIQQSQILYKPNLMCEICTVNCPNPEQYEKHLEGLRHQKRLKLNRYIELKNNKDPSVYCDICDLLMNEDSMTLHRASGKHKRKSTVEVKDEPAEKKTKNADIHTTVEHCGYCHVSLKSANDAIAHYQTQKHALNMTNRSRNYELWCGICQISFTNQNFLDLHLAGFKHFVRLNRGNQAPEGAFGERLIKMRAKLQNLKQSRKAKKSSNLANCQILSNEQSQN 345
BLAST of Zinc finger, C2H2-like protein vs. Planmine SMEST
Match: SMESG000074376.1 (SMESG000074376.1) HSP 1 Score: 266.929 bits (681), Expect = 7.352e-88 Identity = 134/199 (67.34%), Postives = 152/199 (76.38%), Query Frame = 1 Query: 1 MNNMYDNVSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQYRSPYVTNKKTIPVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDC-MDPVEYSD--QQGQILSKSNLMCEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRA 588 M+N Y N+SSY CVACNIYFNNFDEQKQH F HS S+DHESL S+LYSQYR TNKK IPVQCD CNI+CSSQTTYDFHIKGK+HTK L++K L E K + E N D V+ QQ QIL K NLMCEIC VNC PEQ E+HLEG RH+K+LKLNRYIEL+NNKDPSV+CDIC+ MNE+SM +HRA Sbjct: 1 MHNSYVNLSSYRCVACNIYFNNFDEQKQHYFTYHSRSFDHESLTSSLYSQYRPLSATNKKVIPVQCDACNISCSSQTTYDFHIKGKRHTKTLTKKALSEIDKATNFTNFEENRISTDSVQIPAIIQQSQILYKPNLMCEICTVNCPNPEQYEKHLEGLRHQKRLKLNRYIELKNNKDPSVYCDICDLLMNEDSMTLHRA 199
BLAST of Zinc finger, C2H2-like protein vs. Planmine SMEST
Match: SMESG000067728.1 (SMESG000067728.1) HSP 1 Score: 144.821 bits (364), Expect = 1.884e-39 Identity = 87/281 (30.96%), Postives = 147/281 (52.31%), Query Frame = 1 Query: 187 PVQCDVCNITCSSQTTYDFHIKGKKHTKALSRKDLFENGKTASNAKVEGNDCMDPVEYSDQQGQILSKSNLM-----------------CEICDVNCLRPEQLERHLEGSRHRKKLKLNRYIELRNNKDPSVFCDICESFMNEESMNMHRASGKHKRKSSAEVKDEPAEKKARSADIPTTVEHCGYCHMSLKNASDAIAHYQTQKHALNMTNRSRNFELWCDVCQISFTNQSFLDLHLTGFKHFVRVNRGNSAPE-GAFGERLMKMRAKLQSLK-QSRKEK 972 P C++C I+C+S++ YD H +GKKH +AL + + + K+ ND + + +++ N++ C+ICD++C L+ HL G++H++KLK +L NKDP V+C+ICE + M +H+ S KHK+ + E+ P K +E CG C SL SDA+ HY ++ H L + + N WC++C+I+ ++S L++HL GF+H+ +NR + G + E+++ R K + L+ Q KEK Sbjct: 40 PHNCEICKISCNSKSIYDIHTEGKKHKRALEKLSELKFPCDLCSQKL--NDYNTWITHLSSHEHRIAELNILSSTTCNLPRTTLNKINRCDICDLDCGSNIILQSHLTGAKHKRKLKQLNMEKLAENKDPKVYCEICEICLEPNLMMLHKQSNKHKKVNVKEIIINPRSKSG--------MEFCGLCDQSLSGISDAVDHYNSENH-LKLVKNNEN-SCWCNICKITLPDESLLEIHLKGFRHYRILNREECISKTGTYKEKMLYKRMKQKELRVQYEKEK 308 The following BLAST results are available for this feature:
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 1
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of Zinc finger, C2H2-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 2
BLAST of Zinc finger, C2H2-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of Zinc finger, C2H2-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of Zinc finger, C2H2-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30030966 ID=SMED30030966|Name=Zinc finger, C2H2-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1364bpback to top protein sequence of SMED30030966-orf-1 >SMED30030966-orf-1 ID=SMED30030966-orf-1|Name=SMED30030966-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=361bp MNNMYDNVSSYCCVACNIYFNNFDEQKQHCFLNHSGSYDHESLKSALYSQback to top Annotated Terms
The following terms have been associated with this transcript:
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