Ubox domain containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30030897 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of Ubox domain containing protein vs. TrEMBL
Match: K1P710 (Uncharacterized protein OS=Crassostrea gigas OX=29159 GN=CGI_10008445 PE=4 SV=1) HSP 1 Score: 449.129 bits (1154), Expect = 1.062e-148 Identity = 223/519 (42.97%), Postives = 328/519 (63.20%), Query Frame = 1 Query: 157 DFLSDPTSYFLNSTSFDAHLEAQNTYRNRYLATVLQLVNMKIEILPSAKVKAITCAWARKDQEMANVFLSMKKIFNFVEVAKAVNLLDIPRQIKATENKINKLKMLEENKKITVKLSTYKTLAKKISTLSKQKLNFGSVSGALCRQVRNWASKFNETELEFFLMNFDTTVWKEMADIVHFNPQKNFSSLSWFLPYCFGKSAPEISTVERTKNLNSENVNEILKSTPLPFHKISKFKQNLTDESKVIIVKNEDNVGRAIWWYEDLECCQVDEIIMERLCSNEKLEFGYGKLMERLMMLKPKNVCFYPKLMEIAESKLSEYSHCLEGPIGVLADASSSMDVAIRTATIISSFLTVFTNAQLIFFNDNYWIPEKNPTSISDVIDLALNTQASNSTSPAAALWHFYQNKTKLKTIIMVTDEEENTNYQDNDFMTLFKKYIDEVGPCKLIFISFLSSQHSQGQMVNALRAANIDTTQYVFNSIKPDISKLDSIIGKMSLSNSRFLDGLVAIETSLGNETVETVF 1713 D ++P YF + + + H QN R RY AT+ L +++ +A+++A+ AWARKD ++A FL + F EV KA+ LLD RQ + E K +KML+ +K VK T L I L+K K +GS SGA+C+ +R W F EL F+ ++F WK++ADI HF+PQK+F SL WFLPYC+G+SAP +TV R ++N+ENVNE+L+ +P+ + K LT+ SK I ED + +WWYE+L C +V++ + RL + + GKL+ERLM+ K +N FY L++IAE KL + LE P+ V+ DASSSM VA++T+TII+ LT T+A+L FFND + P+K PT++ +V++LALNT AS T+ AA+L+ +Y+ K LKT+IMVTDEEENT++Q+ F L+ KY +EV P +L+F+SFL QHS+GQMV +A+N+D Q VF+ +PD++KLD + G +S F + + E + + V+ VF Sbjct: 4 DLETNPQDYFTGNVTVEQHYNGQNENRERYAATMAVLQENGVDVAQNARIRALAAAWARKDFKLAESFLGNRDNFGLNEVLKALQLLDAGRQARVLEKK---MKMLQVSKN-KVKSITMGKLKSDIDNLNKMKSPYGSASGAVCKHIRRWVQHFTAKELVFYAIHFPKEPWKKLADICHFHPQKDFPSLDWFLPYCYGQSAPADTTVGRMVSMNAENVNELLEGLNIPYLTVKPHKDKLTNVSKGRIADREDKLDTVLWWYEELACPEVEDAVQRRLEKGDPVTLPIGKLLERLMVFKSRNAKFYHDLLKIAEYKLKQIKLPLESPVFVMGDASSSMSVAVKTSTIIAGILTAITSAKLSFFNDTHREPDKVPTNVEEVLELALNTPASGCTANAASLYPYYERKEVLKTLIMVTDEEENTSFQNFRFKELYTKYCEEVYPARLVFVSFLHFQHSKGQMVTRFKASNMDVMQCVFHRSQPDLTKLDKLFGLLSAETQSFEEQIKMTEEQVRKQGVDKVF 518
BLAST of Ubox domain containing protein vs. TrEMBL
Match: A0A267DXV1 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig020745g1 PE=4 SV=1) HSP 1 Score: 437.187 bits (1123), Expect = 2.543e-143 Identity = 215/524 (41.03%), Postives = 320/524 (61.07%), Query Frame = 1 Query: 157 DFLSDPTSYFLNSTSFDAHLEAQNTYRNRYLATVLQLVNMKIEILPSAKVKAITCAWARKDQEMANVFLSMKKIFNFVEVAKAVNLLDIPRQIKATENKINKLKMLEENKKITVKLSTYKTLAKKISTLSKQKLNFGSVSGALCRQVRNWASKFNETELEFFLMNFDTTVWKEMADIVHFNPQKNFSSLSWFLPYCFGKSAPEISTVERTKNLNSENVNEILKSTPLPFHKISKFKQNLTDESKVIIVKNEDNVGRAIWWYEDLECCQVDEIIMERLCSNEKLEFGYGKLMERLMMLKPKNVC--FYPKLMEIAESKLSEYSHCLEGPIGVLADASSSMDVAIRTATIISSFLTVFTNAQLIFFNDNYWIPEKNPTSISDVIDLALNTQASNSTSPAAALWHFYQNKTKLKTIIMVTDEEENTNYQDNDFMTLFKKYIDEVGPCKLIFISFLSSQHSQGQMVNALRAANIDTTQYVFNSIKPDISKLDSIIGKMSLSNSRFLDGLVAIETSLGNETVETVFGNI 1722 D D +++FL TSF+ H AQ + R+RY A + L +EI +A+V+A+ AWAR D +A+ L ++ F EV KA +LD R+I+ E ++ K +++ K + I LS + GS SGA CR V+ W F+ EL++F ++ WK++ADI H +P +F + WFLP+CFG AP+ + ++ + ENVNEIL LPF +I +F +++++++K +V+N+D V R IWWYED++C +VD I ERL + EK+ YGKLMERL++ + FYP L+ +AE KL E + LE P+ V+ DASSSM+VAIRTATIISS L+ LIFFN W PE NP +I +V+ LA +T+AS T+ AAAL+ +Y+ K ++T I+VTDEEENT++Q F LF++Y EV KL+F+SFL QHS+GQMV ++ Q+V N +PD++KLDSI+G++ + S F + + + +G E + VF + Sbjct: 58 DIAGDSSAFFLGVTSFEQHTRAQTSNRSRYAAAIAVLTKSGVEINQNARVRALAAAWARNDPALADGLLKLRGSFGVAEVLKAATMLDSGRKIREWEKRLAK----AQSQPGGAKKKFVSKVKYNIDNLSAIRPAQGSASGAFCRHVKRWVRTFSLAELDYFALHMSKDPWKKLADICHLSPSIDFPAAPWFLPFCFGAEAPDGTLAKQCSIITPENVNEILAERALPFSEIRRFLEHMSNQTKARVVRNDDRVDRGIWWYEDVKCPEVDAAIEERLRNGEKVTLTYGKLMERLLLFSGMSPVPSFYPMLIPVAEHKLQETTLNLESPVVVIGDASSSMNVAIRTATIISSLLSAIIKCDLIFFNVKSWSPEANPRTIEEVLSLARSTKASGCTAHAAALYPYYERKEIVRTFIVVTDEEENTDFQGTRFFPLFERYRQEVFDAKLVFVSFLRQQHSRGQMVYKAAELGLNVQQFVLNGSRPDLNKLDSILGRLGVQCSTFEEEVQKMTDRIGTEGLREVFDQL 577
BLAST of Ubox domain containing protein vs. TrEMBL
Match: A0A210QK84 (Uncharacterized protein OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT23956 PE=4 SV=1) HSP 1 Score: 425.631 bits (1093), Expect = 1.269e-138 Identity = 219/563 (38.90%), Postives = 337/563 (59.86%), Query Frame = 1 Query: 103 PIQKLSSAIDNEEILKEYDFLSDPTSYFLNSTSFDAHLEAQNTYRNRYLATVLQLVNMKIEILPSAKVKAITCAWARKDQEMANVFLSMKKIFNFVEVAKAVNLLDIPRQIKATENKINKLKMLEENKKITVKLSTYKTLAKKISTLSKQKLNFGSVSGALCRQVRNWASKFNETELEFFLMNFDTTVWKEMADIVHFNPQKNFSSLSWFLPYCFGKSAPEISTVERTKNLNSENVNEILKSTPLPFHKISKFKQNLTDESKVIIVKNEDNVGRAIWWYEDL--ECCQVDEIIMERLCSNEKLEFGYGKLMERLMMLK------PKNVCFYPKLME---------------IAESKLSEYSHCLEGPIGVLADASSSMDVAIRTATIISSFLTVFTNAQLIFFNDNYWIPEKNPTSISDVIDLALNTQASNSTSPAAALWHFYQNKTKLKTIIMVTDEEENTNYQDNDFMTLFKKYIDEVGPCKLIFISFLSSQHSQGQMVNALRAANIDTTQYVFNSIKPDISKLDSIIGKMSLSNSRFLDGLVAIETSLGNETVETVFGNI 1722 P + SS D++ +KE +D ++F+ + S H AQN RY A + L +EI+ +A+++A+ AWARKD +++N FL + F VEV KA+ L+D RQI+A E ++ L++ K++ K T L I L+ K FG+ SGA+C+ +R W F ELEF+ + F W+++AD+ HFNP+K+F +L+WFLPYCFGK APE S R ++L +EN+NE++K P+P+ + K T ESK I E + +W+YED+ C VD+II +R+ + E+++ GKLM+RL+MLK P + + KL +L E S LE PI V DAS SM++AIRT+ IIS L +A+LIFFN+++ P PT+I +V++LA+ T+A TSPAA+LW +Y+ K +KT IMVTDEEEN+ Y+++ F L++KY DEV P +L+F+SFL QH++GQMV L++ + Q F+ +PD++KLD + G +S + F + + A+E+S+ ++ + VF + Sbjct: 29 PTEGTSS--DSQVEVKELSVDTDLQAFFVGNASVAQHYAAQNQNTQRYAAGMAVLQKNGVEIVQNARIRALAAAWARKDFDLSNAFLKDRDNFGLVEVLKALQLIDSGRQIRAKEKQLRILQI--STNKVSPK--TMGKLKSDIDNLNALKPPFGTASGAVCKHIRRWVQTFTTEELEFYSLYFPKQPWQKLADLCHFNPEKDFPALTWFLPYCFGKDAPEGSMTYRCQHLTTENINEVIKEFPIPYSLAKQHKDGFTPESKARIAAYEPKLDTILWYYEDIGQNCSDVDKIIADRMKAGEEVKLQLGKLMDRLLMLKMYRENIPSKLYYGQKLERSVDENKAPFIQQLAVYGNKRLKEISLSLEAPIVVSGDASGSMEIAIRTSVIISGILAAICSAKLIFFNNDFRYPSSVPTNIEEVLELAIETKAGGGTSPAASLWPYYEKKEVIKTFIMVTDEEENSGYKNHRFAELYQKYYDEVYPMRLVFVSFLRDQHAEGQMVRELKSKGHNPLQVKFHQTQPDLTKLDKMFGTLSSESLTFEEEVTAMESSIRDQGLANVFQKV 585
BLAST of Ubox domain containing protein vs. TrEMBL
Match: R7U0Y5 (Uncharacterized protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_197625 PE=4 SV=1) HSP 1 Score: 425.246 bits (1092), Expect = 6.141e-138 Identity = 221/532 (41.54%), Postives = 330/532 (62.03%), Query Frame = 1 Query: 163 LSDPTSYFLNSTSFDAHLEAQNTYRNRYLATVLQLVNMKIEILPSAKVKAITCAWARKDQEMANVFLSMKKIFNFVEVAKAVNLLDIPRQIKATENKINKLKMLEENKKITVKLSTYKTLAKKISTLSKQKLNFGSVSGALCRQVRNWASKFNETELEFFLMNFDTTVWKEMADIVHFNPQKNFSSLSWFLPYCFGKSAPEISTVERTKNLNSENVNEILKSTPLPFHKISKFKQNLTDESKVIIVKNEDNVGRAIWWYEDLECCQVDEIIMERLCSNEKLEFGYGKLMERLMMLKPKNV----CFYPKLMEIAESKLSEYSHCLEGPIGVLADASSSMDVAIRTATIISSFLTVFTNAQLIFFNDNYWIPEKNPTSISDVIDLALNTQASNSTSPAAALWHFYQNKTKLKTIIMVTDEEEN----TNYQD-----NDFMTLFKKYIDEVGPCKLIFISFLSSQHSQGQMVNALRAANI--DTTQYVFNSIKPDISKLDSIIGKMSLSNSRFLDGLVAIETSLGNETVETVF 1713 + D YF+ T FD H AQ +NRYLA ++ L +E+ +AKVKA++ AWAR D+ M FLS ++ F VE+ KA+ LLD R+++A E K+ +L+M K KL K+ I L+ KL GS SGA+C+Q++NWA F+ TELE + ++F T WK+++DI HFNP+K+F SL WFLP+CFG APE S V + +NLN++ NE++ LPF + +F ++LT+ESK I + D + + +WWYE+L C VDE I RL E+ YGKLMERL+ + + F +L+ +A+ +LS+ + L+ P+ V+ D S+SMDVAIRT+TII+S +T +A+L+FF++ PT I V+++A+ + ST PAA+L FY+ K +KT +VTDEEEN + +D + F LFKKY +E+ P KL+FISFL QHS+G+MV+AL+ + D TQ+ F+S +PD+SKLD + G +S +S F ++ +E + ++ F Sbjct: 102 MEDLKKYFVEETHFDQHYAAQEENKNRYLAGMVVLEENGVEVSTNAKVKALSAAWARGDRAMVKRFLSSRESFGLVEILKALTLLDTSRRVRAEEKKLKRLQMQTNGKVNAKKLGKLKS---NIDNLNVNKLKCGSASGAICKQLKNWARSFSATELENYALHFPTEPWKKISDICHFNPKKDFPSLPWFLPFCFGSPAPEGSMVAQCRNLNADAANEMINKYSLPFSYVKEFSEHLTEESKAKIART-DTLDQVLWWYENLRCPAVDEEIRRRLLGGEQPTLAYGKLMERLLTITLIGIQAEGHFIQQLIPLAQKRLSDINFKLQAPVVVIGDRSASMDVAIRTSTIIASLITAICSARLVFFDNENMEAPFIPTDIEKVLEMAVEIKTGASTIPAASLLPFYEAKEIVKTFFIVTDEEENGEVAVSGKDGTVSYDRFAPLFKKYREEIFPAKLVFISFLRGQHSEGEMVSALKCIGVTEDVTQFKFDSSRPDLSKLDKLFGILSTDSSDFEQRVIEVENEISTAEIQPDF 629
BLAST of Ubox domain containing protein vs. TrEMBL
Match: W4XWX0 (Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1) HSP 1 Score: 412.149 bits (1058), Expect = 1.595e-133 Identity = 207/527 (39.28%), Postives = 314/527 (59.58%), Query Frame = 1 Query: 85 SKTRRKPIQKLSSAIDNEEILKEYDFLSDPTSYFLNS-TSFDAHLEAQNTYRNRYLATVLQLVNMKIEILPSAKVKAITCAWARKDQEMANVFLSMKKIFNFVEVAKAVNLLDIPRQIKATENKINKLKMLEENKKITVKLSTYKTLAKKISTLSKQKLNFGSVSGALCRQVRNWASKFNETELEFFLMNFDTTVWKEMADIVHFNPQKNFSSLSWFLPYCFGKSAPEISTVERTKNLNSENVNEILKSTPLPFHKISKFKQNLTDESKVIIVKNEDNVGRAIWWYEDLECCQVDEIIMERLCSNEKLEFGYGKLMERLMMLKPKNV--CFYPKLMEIAESKLSEYSHCLEGPIGVLADASSSMDVAIRTATIISSFLTVFTNAQLIFFNDNYWIPEKNPTSISDVIDLALNTQASNSTSPAAALWHFYQNKTKLKTIIMVTDEEENTNYQDNDFMTLFKKYIDEV-GPCKLIFISFLSSQHSQGQMVNALRAANIDTTQYVFNSIKPDISKLDSIIGKMSLSNSRF 1653 S ++P Q + E + DF P F +S +F+ H AQ +YRN YLAT+ L+ + I KV+A+ AWARKD +A FL + F E+ KA+NLLD R+++ E ++ +L+ ++ +K+ V + I L+ K GSVSGAL R +R W +LEF+ +++ WK +ADI H NP+K+F WFL YCFG+ AP S V + +N+EN+NE++K +P+ I +F NLT+ESK I E+ V +W+YEDL C +VDE+I R+ E + GKL+ERL+++K + + C L+ A +L LE P+ +L D S SM+VAI+T+TII+ LT T+A+L FF+ ++PEK P +I++++++A + T+PAA LW +++ K +KT ++VTDEEEN+N F LFKKY +EV KL+FISFL SQH++GQMV+ L A I Q+ F+ ++PD++KLDS++G +S S + F Sbjct: 34 SGQGQQPDQDIDEWNLTETATSDQDFEKRPELLFTSSKVTFEQHFAAQESYRNIYLATLKVLLANGVSISQGIKVRALAVAWARKDHALAETFLQDSETFTMAEILKALNLLDAGRRMREKERRLRQLQ-VQIQEKVKVNPKKMSKVKSDIDNLNAAKPKVGSVSGALSRHIRRWVRSLTSAQLEFYALHYPKEPWKTLADICHLNPKKDFPEKPWFLSYCFGEPAPSESLVAKCAGMNAENINELVKGVDVPYSHIKQFTLNLTEESKERIASYEEKVDTLLWYYEDLHCPKVDEVICRRISDGEAVTLPSGKLIERLLLMKTQGIGTCVMESLIPEAAKRLKAMKVSLEAPVAILGDRSPSMEVAIKTSTIIAGLLTAITDAKLSFFSYKDYVPEKIPKTITEILEMASTLRTDGGTAPAAGLWPYFRRKEVIKTFVVVTDEEENSNNNGYSFQALFKKYQEEVYSDVKLVFISFLRSQHAEGQMVSQLTADGIHPMQFKFSLVRPDLTKLDSVLGLLSTSTADF 559
BLAST of Ubox domain containing protein vs. Planmine SMEST
Match: SMESG000054668.1 (SMESG000054668.1) HSP 1 Score: 1151.35 bits (2977), Expect = 0.000e+0 Identity = 557/558 (99.82%), Postives = 558/558 (100.00%), Query Frame = 1 Query: 55 MAPRKLKFHSSKTRRKPIQKLSSAIDNEEILKEYDFLSDPTSYFLNSTSFDAHLEAQNTYRNRYLATVLQLVNMKIEILPSAKVKAITCAWARKDQEMANVFLSMKKIFNFVEVAKAVNLLDIPRQIKATENKINKLKMLEENKKITVKLSTYKTLAKKISTLSKQKLNFGSVSGALCRQVRNWASKFNETELEFFLMNFDTTVWKEMADIVHFNPQKNFSSLSWFLPYCFGKSAPEISTVERTKNLNSENVNEILKSTPLPFHKISKFKQNLTDESKVIIVKNEDNVGRAIWWYEDLECCQVDEIIMERLCSNEKLEFGYGKLMERLMMLKPKNVCFYPKLMEIAESKLSEYSHCLEGPIGVLADASSSMDVAIRTATIISSFLTVFTNAQLIFFNDNYWIPEKNPTSISDVIDLALNTQASNSTSPAAALWHFYQNKTKLKTIIMVTDEEENTNYQDNDFMTLFKKYIDEVGPCKLIFISFLSSQHSQGQMVNALRAANIDTTQYVFNSIKPDISKLDSIIGKMSLSNSRFLDGLVAIETSLGNETVETVFGNIGQ 1728 MAPRKLKFHSSKTRRKPIQKLSSAIDNEE+LKEYDFLSDPTSYFLNSTSFDAHLEAQNTYRNRYLATVLQLVNMKIEILPSAKVKAITCAWARKDQEMANVFLSMKKIFNFVEVAKAVNLLDIPRQIKATENKINKLKMLEENKKITVKLSTYKTLAKKISTLSKQKLNFGSVSGALCRQVRNWASKFNETELEFFLMNFDTTVWKEMADIVHFNPQKNFSSLSWFLPYCFGKSAPEISTVERTKNLNSENVNEILKSTPLPFHKISKFKQNLTDESKVIIVKNEDNVGRAIWWYEDLECCQVDEIIMERLCSNEKLEFGYGKLMERLMMLKPKNVCFYPKLMEIAESKLSEYSHCLEGPIGVLADASSSMDVAIRTATIISSFLTVFTNAQLIFFNDNYWIPEKNPTSISDVIDLALNTQASNSTSPAAALWHFYQNKTKLKTIIMVTDEEENTNYQDNDFMTLFKKYIDEVGPCKLIFISFLSSQHSQGQMVNALRAANIDTTQYVFNSIKPDISKLDSIIGKMSLSNSRFLDGLVAIETSLGNETVETVFGNIGQ Sbjct: 1 MAPRKLKFHSSKTRRKPIQKLSSAIDNEEVLKEYDFLSDPTSYFLNSTSFDAHLEAQNTYRNRYLATVLQLVNMKIEILPSAKVKAITCAWARKDQEMANVFLSMKKIFNFVEVAKAVNLLDIPRQIKATENKINKLKMLEENKKITVKLSTYKTLAKKISTLSKQKLNFGSVSGALCRQVRNWASKFNETELEFFLMNFDTTVWKEMADIVHFNPQKNFSSLSWFLPYCFGKSAPEISTVERTKNLNSENVNEILKSTPLPFHKISKFKQNLTDESKVIIVKNEDNVGRAIWWYEDLECCQVDEIIMERLCSNEKLEFGYGKLMERLMMLKPKNVCFYPKLMEIAESKLSEYSHCLEGPIGVLADASSSMDVAIRTATIISSFLTVFTNAQLIFFNDNYWIPEKNPTSISDVIDLALNTQASNSTSPAAALWHFYQNKTKLKTIIMVTDEEENTNYQDNDFMTLFKKYIDEVGPCKLIFISFLSSQHSQGQMVNALRAANIDTTQYVFNSIKPDISKLDSIIGKMSLSNSRFLDGLVAIETSLGNETVETVFGNIGQ 558 The following BLAST results are available for this feature:
BLAST of Ubox domain containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Ubox domain containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Ubox domain containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Ubox domain containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Ubox domain containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Ubox domain containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of Ubox domain containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of Ubox domain containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Ubox domain containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Ubox domain containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Ubox domain containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Ubox domain containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of Ubox domain containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Ubox domain containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30030897 ID=SMED30030897|Name=Ubox domain containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1808bpback to top protein sequence of SMED30030897-orf-1 >SMED30030897-orf-1 ID=SMED30030897-orf-1|Name=SMED30030897-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=559bp MAPRKLKFHSSKTRRKPIQKLSSAIDNEEILKEYDFLSDPTSYFLNSTSFback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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