Lim domain binding protein, putative

Overview
NameLim domain binding protein, putative
Smed IDSMED30030888
Length (bp)1540
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Lim domain binding protein, putative (SMED30030888) t-SNE clustered cells

Violin plots show distribution of expression levels for Lim domain binding protein, putative (SMED30030888) in cells (dots) of each of the 12 neoblast clusters.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30030888

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 3

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30030888SMESG000047533.1 SmedASXL_059561SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
reproductive organSMED30030888SMESG000047533.1 Contig40760newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30030888SMESG000047533.1 Contig40760uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Human
Match: LDB1 (LIM domain binding 1 [Source:HGNC Symbol;Acc:HGNC:6532])

HSP 1 Score: 184.111 bits (466), Expect = 1.164e-52
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 346
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Human
Match: LDB1 (LIM domain binding 1 [Source:HGNC Symbol;Acc:HGNC:6532])

HSP 1 Score: 184.111 bits (466), Expect = 2.823e-52
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   67 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 382
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Human
Match: LDB1 (LIM domain binding 1 [Source:HGNC Symbol;Acc:HGNC:6532])

HSP 1 Score: 181.03 bits (458), Expect = 3.675e-51
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   67 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQ--DVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 380
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Human
Match: LDB2 (LIM domain binding 2 [Source:HGNC Symbol;Acc:HGNC:6533])

HSP 1 Score: 177.948 bits (450), Expect = 2.252e-50
Identity = 116/321 (36.14%), Postives = 174/321 (54.21%), Query Frame = 3 
Query:  546 ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIPIYLLRFLQ---ITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRR-TYKRKKLK-------------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            E RI E N+RLQ RTE  DN WWDA  T+FFE++A L ++F  +D P ++ + R +IPRYF +VF+ G ++ +Y ++ ++  Y  S+I  D D   M+    + G P    V  EGRL+L F  ++ MRIK+W F IR  RE + ++I   +  +    D     IT  G+  + L +L+   I + MQE      ++   P+          WQ M+A P E +R+ T KR+K K             +A+S+ + K   + N+    +SQ  DV+VVGEP LMG E+   DE  ITRLEN Q+D   G+ +++  N SP
Sbjct:   29 EYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCTMVT---QHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSL--SSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQYDAANGMDDEEDFNNSP 344
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Human
Match: LDB2 (LIM domain binding 2 [Source:HGNC Symbol;Acc:HGNC:6533])

HSP 1 Score: 175.637 bits (444), Expect = 1.800e-49
Identity = 114/321 (35.51%), Postives = 172/321 (53.58%), Query Frame = 3 
Query:  546 ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIPIYLLRFLQ---ITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRR-TYKRKKLK-------------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            E RI E N+RLQ RTE  DN WWDA  T+FFE++A L ++F  +D P ++ + R +IPRYF +VF+ G ++ +Y ++ ++  Y  S+I  D D   M+    + G P    V  EGRL+L F  ++ MRIK+W F IR  RE + ++I   +  +    D     IT  G+  + L +L+   I + MQE      ++   P+          WQ M+A P E +R+ T KR+K K             +A+S+ + K   + N+    +    DV+VVGEP LMG E+   DE  ITRLEN Q+D   G+ +++  N SP
Sbjct:   29 EYRIYEMNKRLQSRTEDSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCTMVT---QHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLDQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANL----SLSSQDVMVVGEPTLMGGEFGDEDERLITRLENTQYDAANGMDDEEDFNNSP 342
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Celegans
Match: ldb-1 (F58A3.1a; LIM Domain Binding protein [Source:UniProtKB/TrEMBL;Acc:G5EEL0])

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-13
Identity = 52/178 (29.21%), Postives = 86/178 (48.31%), Query Frame = 3 
Query:  513 QARSNTQYPFTECRINEFNRRL-----QERTEACDNEWWDALITDFFEENAIL-------NITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMR--SARNYYSGSTIVTDSDSALMIMSF---PKFGPPQSVTVEGRLVLVFNN-NETM--RIKSWTFDIRNNREYILKTITG 986
            Q   NT  P  E RI++ NRRL        +E    +WWDA   +FF+++  L        + FA     ++ + R  IP++FRS+FDSG  E  Y +R  S     +  +   ++++ L I  +    +F     V  EG+L + F   +E M  RIK+WT +++ + E++    T 
Sbjct:   53 QPIGNTVSPL-EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRE--RYIINRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQF----EVNTEGKLYVEFAPFDEVMNYRIKAWTLELKRSNEFVYNQNTA 223
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Celegans
Match: ldb-1 (F58A3.1a; LIM Domain Binding protein [Source:UniProtKB/TrEMBL;Acc:G5EEL0])

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-13
Identity = 52/178 (29.21%), Postives = 86/178 (48.31%), Query Frame = 3 
Query:  513 QARSNTQYPFTECRINEFNRRL-----QERTEACDNEWWDALITDFFEENAIL-------NITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMR--SARNYYSGSTIVTDSDSALMIMSF---PKFGPPQSVTVEGRLVLVFNN-NETM--RIKSWTFDIRNNREYILKTITG 986
            Q   NT  P  E RI++ NRRL        +E    +WWDA   +FF+++  L        + FA     ++ + R  IP++FRS+FDSG  E  Y +R  S     +  +   ++++ L I  +    +F     V  EG+L + F   +E M  RIK+WT +++ + E++    T 
Sbjct:   53 QPIGNTVSPL-EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRE--RYIINRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQF----EVNTEGKLYVEFAPFDEVMNYRIKAWTLELKRSNEFVYNQNTA 223
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Celegans
Match: ldb-1 (F58A3.1a; LIM Domain Binding protein [Source:UniProtKB/TrEMBL;Acc:G5EEL0])

HSP 1 Score: 72.4034 bits (176), Expect = 2.851e-13
Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 3 
Query:  513 QARSNTQYPFTECRINEFNRRL-----QERTEACDNEWWDALITDFFEENAIL-------NITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMR--SARNYYSGSTIVTDSDSALMIMSF---PKFGPPQSVTVEGRLVLVFNN-NETM--RIKSWTFDIRNNREYI 968
            Q   NT  P  E RI++ NRRL        +E    +WWDA   +FF+++  L        + FA     ++ + R  IP++FRS+FDSG  E  Y +R  S     +  +   ++++ L I  +    +F     V  EG+L + F   +E M  RIK+WT +++ + E++
Sbjct:   39 QPIGNTVSPL-EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASR--ERYIINRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQF----EVNTEGKLYVEFAPFDEVMNYRIKAWTLELKRSNEFV 203
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Celegans
Match: ldb-1 (F58A3.1a; LIM Domain Binding protein [Source:UniProtKB/TrEMBL;Acc:G5EEL0])

HSP 1 Score: 71.633 bits (174), Expect = 5.177e-13
Identity = 50/169 (29.59%), Postives = 85/169 (50.30%), Query Frame = 3 
Query:  513 QARSNTQYPFTECRINEFNRRL-----QERTEACDNEWWDALITDFFEENAIL-------NITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMR--SARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNN-NETM--RIKSWTFDIRNNREYI 968
            Q   NT  P  E RI++ NRRL        +E    +WWDA   +FF+++  L        + FA     ++ + R  IP++FRS+FDSG  E  Y +R  S     +  +   ++++ L I  + +    + V  EG+L + F   +E M  RIK+WT +++ + E++
Sbjct:   90 QPIGNTVSPL-EFRIHDMNRRLYIFSSTGVSENDQQQWWDAFSHEFFDDDCKLWFVIGSEPVAFASRE--RYIINRQFIPKFFRSIFDSGMRELQYVLRGPSRECTLANGSQAYENENVLQITRYDQSSQFE-VNTEGKLYVEFAPFDEVMNYRIKAWTLELKRSNEFV 254
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Fly
Match: Chi (gene:FBgn0013764 transcript:FBtr0072191)

HSP 1 Score: 169.088 bits (427), Expect = 1.259e-45
Identity = 112/312 (35.90%), Postives = 163/312 (52.24%), Query Frame = 3 
Query:  519 RSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITG---PNDTN--SNSTDHITYCGI---PIYLLRFLQITKMMQESF-RQKPKLI-------------WQPMIAP---IESSRRTYKRKKLKDASSSLAVKPKKSPNIFQMNT-SQPS------DVVVVGEPILMGDEYAGVDEHSITRLENIQFDG 1349
            R N+ +  TE R+ E N+RLQ+R E  DN WWD+  T+FFE++A L I F  +D P ++ + R +IPR+FRS+++ G S+ ++ ++ A+  +  ++I  D D   +I    + G P    V  + RL+L F  ++ MRIKSW   I+ +RE I +++ G   P D       T +IT  GI    +  LR   I + MQE   R K   +             WQ M+AP    +  R   KR+K K ++S         P   Q  + S PS      DV+VVGEP LMG E+   DE  ITRLEN Q+DG
Sbjct:  208 RHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHNTSITLDCDQCTVIT---QHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHRELIPRSVIGTSLPPDPMLLDQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQKWQRMVAPPGKKDPQRPPNKRRKRKGSNSGGGNNSNTPPVTNQKRSPSGPSFSLSSQDVMVVGEPTLMGGEFGEEDERLITRLENTQYDG 516
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Fly
Match: Chi (gene:FBgn0013764 transcript:FBtr0072192)

HSP 1 Score: 168.703 bits (426), Expect = 1.866e-45
Identity = 111/312 (35.58%), Postives = 164/312 (52.56%), Query Frame = 3 
Query:  519 RSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITG---PNDTN--SNSTDHITYCGI---PIYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIAP---IESSRRTYKRKKLKDASSSLAVKPKKSPNIFQMNT-SQPS------DVVVVGEPILMGDEYAGVDEHSITRLENIQFDG 1349
            R N+ +  TE R+ E N+RLQ+R E  DN WWD+  T+FFE++A L I F  +D P ++ + R +IPR+FRS+++ G S+ ++ ++ A+  +  ++I  D D   +I    + G P    V  + RL+L F  ++ MRIKSW   I+ +RE I +++ G   P D       T +IT  GI    +  LR   I + MQE      ++   P+          WQ M+AP    +  R   KR+K K ++S         P   Q  + S PS      DV+VVGEP LMG E+   DE  ITRLEN Q+DG
Sbjct:  227 RHNSYFSHTEHRVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEGGVSDLYFQLKHAKESFHNTSITLDCDQCTVIT---QHGKPFFTKVCADARLILEFMYDDYMRIKSWHMTIKGHRELIPRSVIGTSLPPDPMLLDQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQKWQRMVAPPGKKDPQRPPNKRRKRKGSNSGGGNNSNTPPVTNQKRSPSGPSFSLSSQDVMVVGEPTLMGGEFGEEDERLITRLENTQYDG 535
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Zebrafish
Match: ldb1b (LIM-domain binding 1b [Source:ZFIN;Acc:ZDB-GENE-990415-135])

HSP 1 Score: 180.644 bits (457), Expect = 1.838e-51
Identity = 118/320 (36.88%), Postives = 170/320 (53.12%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT--YKRKKLKDASSSLAVKPKKS----------PNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRSVF+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+    +RK+     S+++     +           N F + +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSVFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSNMSAGGGSNNNSNNKKKSPANSFPL-SSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 346
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Zebrafish
Match: ldb1b (LIM-domain binding 1b [Source:ZFIN;Acc:ZDB-GENE-990415-135])

HSP 1 Score: 180.259 bits (456), Expect = 3.388e-51
Identity = 118/320 (36.88%), Postives = 170/320 (53.12%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT--YKRKKLKDASSSLAVKPKKS----------PNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRSVF+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+    +RK+     S+++     +           N F + +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   53 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSVFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSNMSAGGGSNNNSNNKKKSPANSFPL-SSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 368
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Zebrafish
Match: ldb1b (LIM-domain binding 1b [Source:ZFIN;Acc:ZDB-GENE-990415-135])

HSP 1 Score: 180.644 bits (457), Expect = 3.518e-51
Identity = 118/320 (36.88%), Postives = 170/320 (53.12%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT--YKRKKLKDASSSLAVKPKKS----------PNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRSVF+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+    +RK+     S+++     +           N F + +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   68 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSVFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSNMSAGGGSNNNSNNKKKSPANSFPL-SSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 383
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Zebrafish
Match: ldb1a (LIM domain binding 1a [Source:NCBI gene;Acc:30579])

HSP 1 Score: 172.94 bits (437), Expect = 1.140e-48
Identity = 117/318 (36.79%), Postives = 166/318 (52.20%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEA-CDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAVKPKKSPNIFQMNTSQPS--------DVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE  CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E FY ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE + ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S       + N        P+        DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEQDCDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELFYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHREVVPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSTMSSGGGNNNNSNSKKKSPASSFALSSQDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNSSP 345
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Zebrafish
Match: ldb2a (LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-990415-136])

HSP 1 Score: 166.777 bits (421), Expect = 9.230e-46
Identity = 114/334 (34.13%), Postives = 174/334 (52.10%), Query Frame = 3 
Query:  546 ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTN----SNSTDHITYCGIPIYLLRFLQITKMMQ---------ESFRQKPKLI--------WQPMIAP------------------IESSRR-TYKRKKLKDASSSL--------AVKPKKSP-NIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            E RI E N+RLQ RTE  D+ WWDA  T+FFEE+A L ++F  +D P ++ + R +IPRYF +VF+ G ++ +Y ++ ++  +  S I  D D   M+    + G P    V  EGRL+L F  ++ MRIK+W F+IR  RE I ++I   +  +       + +IT  G+  + L +L++  +++         +++   P+          WQ M+AP                   E +R+ T KR+K K+++SS         A   K+SP N F + +    DV+VVGEP LMG E+   DE  ITRLEN Q+D   GL +D     SP
Sbjct:   83 EYRIYEMNKRLQSRTEESDSLWWDAFATEFFEEDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESFHNSCITVDCDQCTMVT---QHGKPMFTKVCTEGRLILEFAFDDLMRIKTWHFNIRQYRELIPRSILAMHAQDPGVLEQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAGHPQNFKTEIFPTNHKKEPTRQTTTKRRKRKNSASSASNSSLGNSAGGKKRSPANNFSLAS---QDVMVVGEPTLMGGEFGDEDERLITRLENTQYDATNGLDDDDDFTSSP 410
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Xenopus
Match: sae1 (SUMO1 activating enzyme subunit 1 [Source:Xenbase;Acc:XB-GENE-923356])

HSP 1 Score: 184.496 bits (467), Expect = 1.619e-52
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   52 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 367
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Xenopus
Match: sae1 (SUMO1 activating enzyme subunit 1 [Source:Xenbase;Acc:XB-GENE-923356])

HSP 1 Score: 184.111 bits (466), Expect = 2.072e-52
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   58 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 373
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Xenopus
Match: sae1 (SUMO1 activating enzyme subunit 1 [Source:Xenbase;Acc:XB-GENE-923356])

HSP 1 Score: 184.496 bits (467), Expect = 2.168e-52
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   67 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 382
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Xenopus
Match: sae1 (SUMO1 activating enzyme subunit 1 [Source:Xenbase;Acc:XB-GENE-923356])

HSP 1 Score: 184.496 bits (467), Expect = 2.260e-52
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   67 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 382
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Xenopus
Match: cldn8.1 (claudin 8, gene 1 [Source:Xenbase;Acc:XB-GENE-1013205])

HSP 1 Score: 173.711 bits (439), Expect = 8.182e-49
Identity = 114/319 (35.74%), Postives = 173/319 (54.23%), Query Frame = 3 
Query:  546 ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTN----SNSTDHITYCGIPIYLLRFLQ---ITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRR-TYKRKKLKDASSSL-----------AVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            E RI E N+RLQ RTE  DN WWDA  T+FFE++A L ++F  +D P ++ + R +IPRYF +VF+ G ++ +Y ++ ++  Y  S+I  D D   M+    + G P    V  EGRL+L F  ++ MRIK+W F IR  RE + ++I   +  +       + +IT  G+  + L +L+   I + MQE      ++   P+          WQ M+A P E +R+ T KR+K K+++S+                KK P      ++Q  DV+VVGEP LMG E+   DE  ITRLEN Q+D   G+ +++  N SP
Sbjct:   29 EYRIYEMNKRLQTRTEDSDNLWWDAFATEFFEDDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESYHNSSITVDCDQCTMVT---QHGKPMFTKVCTEGRLILEFTFDDLMRIKTWHFTIRQYRELVPRSILAMHAQDPQVLEQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYNLSPRDCLKTCLFQKWQRMVAPPAEPTRQTTTKRRKRKNSTSNTSNNSTGNNTISTYNKKKLPAGSHNLSNQAPDVMVVGEPTLMGGEFGDEDERLITRLENTQYDAANGMDDEEDFNNSP 344
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Mouse
Match: Ldb1 (LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:894762])

HSP 1 Score: 184.496 bits (467), Expect = 6.976e-53
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 346
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Mouse
Match: Ldb1 (LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:894762])

HSP 1 Score: 184.496 bits (467), Expect = 6.976e-53
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 346
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Mouse
Match: Ldb1 (LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:894762])

HSP 1 Score: 184.496 bits (467), Expect = 1.511e-52
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   67 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 382
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Mouse
Match: Ldb1 (LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:894762])

HSP 1 Score: 184.496 bits (467), Expect = 1.511e-52
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   67 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 382
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Mouse
Match: Ldb1 (LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:894762])

HSP 1 Score: 181.03 bits (458), Expect = 1.200e-51
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQ--DVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 344
[Close]
BLAST of Lim domain binding protein, putative vs. UniProt/SwissProt
Match: sp|P70060|LDB1_XENLA (LIM domain-binding protein 1 OS=Xenopus laevis OX=8355 GN=ldb1 PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 4.584e-52
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 346
[Close]
BLAST of Lim domain binding protein, putative vs. UniProt/SwissProt
Match: sp|P70662|LDB1_MOUSE (LIM domain-binding protein 1 OS=Mus musculus OX=10090 GN=Ldb1 PE=1 SV=2)

HSP 1 Score: 184.496 bits (467), Expect = 1.057e-51
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   67 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 382
[Close]
BLAST of Lim domain binding protein, putative vs. UniProt/SwissProt
Match: sp|Q86U70|LDB1_HUMAN (LIM domain-binding protein 1 OS=Homo sapiens OX=9606 GN=LDB1 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 1.356e-51
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   67 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKEAFHSNFVSLDCDQGSMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPTRQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 382
[Close]
BLAST of Lim domain binding protein, putative vs. UniProt/SwissProt
Match: sp|O42252|LDB1_CHICK (LIM domain-binding protein 1 OS=Gallus gallus OX=9031 GN=LDB1 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.399e-51
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   67 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQQPSKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 382
[Close]
BLAST of Lim domain binding protein, putative vs. UniProt/SwissProt
Match: sp|Q6NVL6|LDB1_XENTR (LIM domain-binding protein 1 OS=Xenopus tropicalis OX=8364 GN=ldb1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 9.409e-51
Identity = 121/319 (37.93%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAV----------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E +R+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQ--DVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 344
[Close]
BLAST of Lim domain binding protein, putative vs. TrEMBL
Match: A0A0B7ASB9 (LID domain-containing protein OS=Arion vulgaris OX=1028688 GN=ORF133700 PE=4 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 9.853e-54
Identity = 130/371 (35.04%), Postives = 189/371 (50.94%), Query Frame = 3 
Query:  417 GPINPNINCQISSNQHGIMSQVTPDMVLANFNQ----ARSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNS---NSTDHITYCGIPIYLLRFLQ---ITKMMQESFRQ------------KPKLI--WQPMIAPIESSRRTYKRKKLK---------------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINR 1403
            GP++  +  Q+S    G MS   P  +    ++     R        + RI E N+RLQ RTE  DN WWD+  T+FFE++A L +TF  +D P ++ + R +IPRYFRS+F+ G ++  Y ++  +  +  +TI  D D ALM+    + G P   +V  EGRL+L F  ++ MRI+SW F IR +RE I +++ G     +     + +IT  G+  Y L FL+   I + MQE   +            K  L   WQ M+AP ES+R   KR+K K               DA  S   K    P  F + ++ P DV+VVGEP LMG E+   DE  ITRLEN QF+   ND   +K  N+  + +
Sbjct:   55 GPMSGPVPGQMSGPMSGPMSGPMPGPMPVFMDRDHMIPRPTPYMGQPDYRIYELNKRLQHRTEDSDNLWWDSFTTEFFEDDAQLTLTFCLEDGPKRYTIGRTLIPRYFRSIFEGGVTDLHYILKYPKESFHNTTITLDCDHALMVT---QHGKPMFTNVITEGRLILEFTFDDLMRIRSWHFAIRQHRELIPRSVIGMQQDPAMVEQLSKNITRMGLTNYTLNFLRLCVILEPMQELMSRHKAYGLNPRDCLKTTLFQKWQRMVAPPESARPPSKRRKRKGSAGSNAGAGNMNNRDAPPSGKQKRSPGPQGFNLGSTVPGDVMVVGEPTLMGGEFGDEDERLITRLENSQFEPTNNDDNADKFHNSPAVQQ 422
[Close]
BLAST of Lim domain binding protein, putative vs. TrEMBL
Match: A0A0B7APM8 (LID domain-containing protein OS=Arion vulgaris OX=1028688 GN=ORF133690 PE=4 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.008e-53
Identity = 130/371 (35.04%), Postives = 189/371 (50.94%), Query Frame = 3 
Query:  417 GPINPNINCQISSNQHGIMSQVTPDMVLANFNQ----ARSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNS---NSTDHITYCGIPIYLLRFLQ---ITKMMQESFRQ------------KPKLI--WQPMIAPIESSRRTYKRKKLK---------------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINR 1403
            GP++  +  Q+S    G MS   P  +    ++     R        + RI E N+RLQ RTE  DN WWD+  T+FFE++A L +TF  +D P ++ + R +IPRYFRS+F+ G ++  Y ++  +  +  +TI  D D ALM+    + G P   +V  EGRL+L F  ++ MRI+SW F IR +RE I +++ G     +     + +IT  G+  Y L FL+   I + MQE   +            K  L   WQ M+AP ES+R   KR+K K               DA  S   K    P  F + ++ P DV+VVGEP LMG E+   DE  ITRLEN QF+   ND   +K  N+  + +
Sbjct:   51 GPMSGPVPGQMSGPMSGPMSGPMPGPMPVFMDRDHMIPRPTPYMGQPDYRIYELNKRLQHRTEDSDNLWWDSFTTEFFEDDAQLTLTFCLEDGPKRYTIGRTLIPRYFRSIFEGGVTDLHYILKYPKESFHNTTITLDCDHALMVT---QHGKPMFTNVITEGRLILEFTFDDLMRIRSWHFAIRQHRELIPRSVIGMQQDPAMVEQLSKNITRMGLTNYTLNFLRLCVILEPMQELMSRHKAYGLNPRDCLKTTLFQKWQRMVAPPESARPPSKRRKRKGSAGSNAGAGNMNNRDAPPSGKQKRSPGPQGFNLGSTVPGDVMVVGEPTLMGGEFGDEDERLITRLENSQFEPTNNDDNADKFHNSPAVQQ 418
[Close]
BLAST of Lim domain binding protein, putative vs. TrEMBL
Match: A0A0B7AS61 (LID domain-containing protein OS=Arion vulgaris OX=1028688 GN=ORF133707 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 3.128e-53
Identity = 121/324 (37.35%), Postives = 173/324 (53.40%), Query Frame = 3 
Query:  546 ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNS---NSTDHITYCGIPIYLLRFLQ---ITKMMQESFRQ------------KPKLI--WQPMIAPIESSRRTYKRKKLK---------------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINR 1403
            + RI E N+RLQ RTE  DN WWD+  T+FFE++A L +TF  +D P ++ + R +IPRYFRS+F+ G ++  Y ++  +  +  +TI  D D ALM+    + G P   +V  EGRL+L F  ++ MRI+SW F IR +RE I +++ G     +     + +IT  G+  Y L FL+   I + MQE   +            K  L   WQ M+AP ES+R   KR+K K               DA  S   K    P  F + ++ P DV+VVGEP LMG E+   DE  ITRLEN QF+   ND   +K  N+  + +
Sbjct:   92 DYRIYELNKRLQHRTEDSDNLWWDSFTTEFFEDDAQLTLTFCLEDGPKRYTIGRTLIPRYFRSIFEGGVTDLHYILKYPKESFHNTTITLDCDHALMVT---QHGKPMFTNVITEGRLILEFTFDDLMRIRSWHFAIRQHRELIPRSVIGMQQDPAMVEQLSKNITRMGLTNYTLNFLRLCVILEPMQELMSRHKAYGLNPRDCLKTTLFQKWQRMVAPPESARPPSKRRKRKGSAGSNAGAGNMNNRDAPPSGKQKRSPGPQGFNLGSTVPGDVMVVGEPTLMGGEFGDEDERLITRLENSQFEPTNNDDNADKFHNSPAVQQ 412
[Close]
BLAST of Lim domain binding protein, putative vs. TrEMBL
Match: A0A0V0J137 (LIM domain-binding protein 2 (Fragment) OS=Schistocephalus solidus OX=70667 GN=LDB2 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 4.227e-53
Identity = 116/302 (38.41%), Postives = 173/302 (57.28%), Query Frame = 3 
Query:  546 ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNIT-FADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTN--SNSTDHITYCGIPIYLLRFLQITKMM---------QESFRQKPKLI--------WQPMIAPI------ESSRRTYKRKKLKDASS--------SLAVKPKKSP-NIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD 1346
            E RI E N+RLQ+R +  D+ WW+  +TDFFE++A + I+   +D P +F + R +IPRYFRS+F+SGC E ++ +R+ R+ +    +  DSD A M+M+  +   P +V VEGRL L F  +E MRI+ WTF IR +RE I++++    D N     + +IT  G+    L FL++  ++         Q+S+   P+          WQ M+AP       E +R+  KR+K K +S+        S A K K+SP  I Q   +QP DV++VGEP LMG ++   DE  ITRLEN Q+D
Sbjct:  145 EYRIFELNKRLQQRGDESDSFWWETFVTDFFEDDATMIISVMLEDGPKRFTVGRTLIPRYFRSIFESGCGELYFNLRATRDSFHNPVLTLDSDCANMVMNIIR-PLPVTVVVEGRLSLDFTADELMRIRLWTFQIRTHRELIMRSLLTIQDPNLFEQISKNITRSGLTGPTLSFLRLCVILEPMQELMSRQKSYNLSPRDCLRATLFQRWQRMMAPQGQPPKPEPNRQANKRRKRKGSSANSEGGAGGSRASKRKQSPLPIPQPCLAQPGDVMIVGEPTLMGGDFGEDDERLITRLENTQYD 445
[Close]
BLAST of Lim domain binding protein, putative vs. TrEMBL
Match: A0A3Q0IRJ0 (LIM domain-binding protein 2 OS=Diaphorina citri OX=121845 GN=LOC103508502 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 5.499e-52
Identity = 121/311 (38.91%), Postives = 166/311 (53.38%), Query Frame = 3 
Query:  552 RINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTN--SNSTDHITYCGI---PIYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIAPIESSRRTYKRKKLKDASSSLAV-------KPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVN----DKMLNKSPN 1385
            R+ E N+RLQ+RTE  DN WWDA  T+FFE++A L +TF  +D P ++ + R +IPRYFRS+FD G +E +Y ++  +  +  ++I  D D   M+      G P    V  EGRL+L F  ++ MRIKSW F +R +RE + +TI G  D +     T +IT  GI    +  LR   I + MQE      ++   P+          WQ M+AP ES R   KR+K K + S  A          K+SP       SQ  DV+VVGEP LMG E+   DE  ITRLEN Q+D   N    D   + SP+
Sbjct:  221 RVYELNKRLQQRTEESDNLWWDAFATEFFEDDATLTLTFCLEDGPKRYTIGRTLIPRYFRSIFDGGITELYYNLKHPKESFHNTSITLDCDQCTMVT---HHGKPMLTKVCTEGRLILEFTFDDLMRIKSWHFAVRQHRELVPRTIVGMQDPSMLEQLTKNITRQGITNSTLNYLRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQKWQRMVAPPESQRPANKRRKRKGSQSGGAANSAPPAPSKKRSPGPNFSLASQ--DVMVVGEPSLMGGEFGDEDERLITRLENTQYDAGANCLDHDPHFSDSPS 526
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Cavefish
Match: ldb2a (LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-990415-136])

HSP 1 Score: 183.341 bits (464), Expect = 1.156e-52
Identity = 117/316 (37.03%), Postives = 175/316 (55.38%), Query Frame = 3 
Query:  546 ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTN----SNSTDHITYCGIPIYLLRFLQITKMMQ---------ESFRQKPKLI--------WQPMIAPIESSRR-TYKRKKLKDASSSL--------AVKPKKSP-NIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            E RI E N+RLQ RTE  DN WWDA  T+FFEE+A L ++F  +D P ++ + R +IPRYF +VF+ G ++ +Y ++ ++  +  S I  D D   M+    + G P    V  EGRL+L F  ++ MRIK+W F IR  RE I +++   +  +       + +IT  G+  + L +L++  +++         +++   P+          WQ M+AP E +R+ T KR+K K+++SS         A   K+SP N F + TSQ  DV+VVGEP LMG E+   DE  ITRLEN Q+D   GL +D     SP
Sbjct:   29 EYRIYELNKRLQSRTEESDNLWWDAFATEFFEEDATLTLSFCLEDGPKRYTIGRTLIPRYFSTVFEGGVTDLYYILKHSKESFHNSCITVDCDQCTMVT---QHGKPMFTKVCTEGRLILEFAFDDLMRIKTWHFTIRQYRELIPRSVLAMHAQDPQVLEQLSKNITRMGLTNFTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPEPTRQTTTKRRKRKNSASSASNSSLGNSAGSKKRSPANSFSL-TSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQYDATNGLDDDDDFTSSP 340
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Cavefish
Match: ldb1a (LIM domain binding 1a [Source:NCBI gene;Acc:30579])

HSP 1 Score: 174.481 bits (441), Expect = 7.673e-49
Identity = 117/320 (36.56%), Postives = 167/320 (52.19%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEA-CDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIAP-IESSRRTYKRKKLKDASSSLAVKP-----------KKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE  CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E FY ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE + ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+AP  E +R+   +++ +  S    V             KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++     SP
Sbjct:   68 TDYRIFELNKRLQNWTEQDCDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELFYVLKHPKESFHSNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHREVVPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARQAPNKRRKRKMSGGSTVSAGGGTNNNSNSKKKSPASSFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFTNSP 384
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Cavefish
Match: ldb1b (LIM domain-binding protein 1 [Source:NCBI gene;Acc:103035624])

HSP 1 Score: 172.17 bits (435), Expect = 4.105e-48
Identity = 116/319 (36.36%), Postives = 163/319 (51.10%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIAPIESSRRTY--KRKKLKDASSSLAVKPKKSPNIFQMNTSQPS----------DVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+AP     R    KR+K K +  S       + N        P+          DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   68 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMVDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARPAANKRRKRKISGGSTMSAGGGTNNNSNSKKKSPAGSFPLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 383
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Cavefish
Match: ldb1b (LIM domain-binding protein 1 [Source:NCBI gene;Acc:103035624])

HSP 1 Score: 172.17 bits (435), Expect = 4.321e-48
Identity = 122/346 (35.26%), Postives = 176/346 (50.87%), Query Frame = 3 
Query:  465 GIMSQVTPDMVLANFNQARSNTQYP-FTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIAPIESSRRTY--KRKKLKDASSSLAVKPKKSPNIFQMNTSQPS----------DVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            G+M+++   + L +    R +T Y   T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  ++ MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+AP     R    KR+K K +  S       + N        P+          DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   43 GVMARIK--VFLFSVPSLRRHTPYGNQTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMVDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPARPAANKRRKRKISGGSTMSAGGGTNNNSNSKKKSPAGSFPLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 383
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Cavefish
Match: ldb2b (LIM domain-binding protein 2-like [Source:NCBI gene;Acc:103041667])

HSP 1 Score: 161.384 bits (407), Expect = 2.783e-44
Identity = 106/324 (32.72%), Postives = 163/324 (50.31%), Query Frame = 3 
Query:  552 RINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSF--PKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTIT-------GPNDTNSNSTDHITYCGIPIYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIAP-------------------IESSRRTYKRKKLKDASSSLAV-----KPKKSP-NIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKM 1367
            R++E N+RLQ RTE CD  WWDA  T+FFEE+A L ++F  ++ P  + + RA+IPR+F ++F+ G  E F+ ++  +  ++ STI  D     M+     P F     V  EGRL+LVF  ++ MRIK+W F I +  E I +++        G  +  S +   +    + +  LR   I + MQE      ++   P+          WQ M  P                    E ++ T KR++ ++++ S +        K+SP N F + T    DV++VGEP LMG +  GVDE  ITRLEN Q+D   GL +D +
Sbjct:   33 RMHELNKRLQSRTEDCDILWWDAFCTEFFEEDATLTLSFCLEEGPKTYTIGRALIPRFFSTLFEGGVYELFFELKHTKESFNNSTITVDCHQCTMVTQHGKPTFA---KVCTEGRLILVFTFDDLMRIKTWHFTISHYSELIPRSVLAVHAQDPGALEQLSKNISRVGLSNLTLNYLRLCMILEPMQELMSRHKTYGLSPRDCLKTCLFHQWQRMTTPPVGPSPSFKTEIFQSNPKKAEPAKPTAKRRRRRNSAGSASGNTTGNSKKRSPANSFSLPT---QDVMMVGEPSLMGGDVGGVDERLITRLENEQYDPTNGLHDDDL 350
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Sea Lamprey
Match: LDB2 (LIM domain binding 2 [Source:HGNC Symbol;Acc:HGNC:6533])

HSP 1 Score: 50.8322 bits (120), Expect = 1.097e-7
Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 3 
Query: 1251 DVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            DV+VVGEP LMG E+   DE  ITRLEN Q+D   GL +D     SP
Sbjct:  112 DVMVVGEPTLMGGEFGDEDERLITRLENTQYDAANGLDDDDDFGHSP 158
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005039.1 (pep scaffold:Pmarinus_7.0:GL480470:8268:13407:1 gene:ENSPMAG00000004584.1 transcript:ENSPMAT00000005039.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 42.743 bits (99), Expect = 8.038e-6
Identity = 20/47 (42.55%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  846 PKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITG 986
            P+F     V  EGRL+L F  ++ MRI+SW F IR +RE I +++  
Sbjct:    8 PRFS---QVCTEGRLILEFAFDDMMRIRSWHFTIRQHRELIPRSLLA 51
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Nematostella
Match: LDB (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S437])

HSP 1 Score: 164.081 bits (414), Expect = 3.226e-46
Identity = 115/330 (34.85%), Postives = 169/330 (51.21%), Query Frame = 3 
Query:  519 RSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQS-VTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTN--SNSTDHITYCGIPIYLLRFLQITKMMQ---------ESFRQKPKLI--------WQPMIAPIESS-------RRTYKRKKLKDASSSLAVKP---------KKSPNI--FQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            R    Y   + RI E NRRLQ+RTE  DN WWD+ +T+FFEE+A L + F  +D P ++ + R +IPRYFRS+F+ G +E +Y +   +  Y  +TI  D ++  MI S  K  P  + V  EGRL+L F  ++ MRI++W F I  +RE I + +    D       + ++T  G+  + L +L++  +++         +++   P+          WQ M AP  ++        R   R+K K +S+  A  P         KKSP    F + T    DV+VVGEP LMG E+   DE  ITRLEN QFD   G+  D     SP
Sbjct:    8 RHTPYYTHPDVRIYELNRRLQQRTEESDNLWWDSFVTEFFEEDATLTLNFCLEDGPKRYTIGRTLIPRYFRSIFEGGVTELYYHLLQPKESYHNTTITLDCENTTMITSHIK--PVYTKVCTEGRLILEFTFDDMMRIRNWHFTIMQHREMIPRNVVAMQDPGMLEQVSKNVTRQGMTNFTLNYLRLCVILEPMQELMSRHKTYNMNPRDCLKSTLFQRWQRMCAPPVTAYSVSPETPRPRTRRKRKSSSTPNASTPTSSGNSHSKKKSPTASNFSLAT---QDVMVVGEPSLMGGEFGDEDERLITRLENTQFDSTNGVGEDAPFGSSP 332
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Nematostella
Match: EDO27910 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T7Y6])

HSP 1 Score: 130.954 bits (328), Expect = 1.826e-35
Identity = 70/188 (37.23%), Postives = 109/188 (57.98%), Query Frame = 3 
Query:  519 RSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQS-VTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTN--SNSTDHITYCGIPIYLLRFLQIT 1070
            R    Y   + RI E NRRLQ+RTE  DN WWD+ +T+FFEE+A L + F  +D P ++ + R +IPRYFRS+F+ G +E +Y +   +  Y  +TI  D ++  MI S  K  P  + V  EGRL+L F  ++ MRI++W F I  +RE I + +    D       + ++T  G+  + L +L+++
Sbjct:    8 RHTPYYTHPDVRIYELNRRLQQRTEESDNLWWDSFVTEFFEEDATLTLNFCLEDGPKRYTIGRTLIPRYFRSIFEGGVTELYYHLLQPKESYHNTTITLDCENTTMITSHIK--PVYTKVCTEGRLILEFTFDDMMRIRNWHFTIMQHREMIPRNVVAMQDPGMLEQVSKNVTRQGMTNFTLNYLRVS 193
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Medaka
Match: ldb1b (LIM domain-binding protein 1 [Source:NCBI gene;Acc:101158085])

HSP 1 Score: 184.111 bits (466), Expect = 6.432e-53
Identity = 122/319 (38.24%), Postives = 171/319 (53.61%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLK----------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  +E MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E SR+   KR+K K            +++ +   KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDEMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPSRQAPNKRRKRKISGGSTISGGGGANTNSNNKKKSPGSGFPLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 346
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Medaka
Match: ldb1b (LIM domain-binding protein 1 [Source:NCBI gene;Acc:101158085])

HSP 1 Score: 184.111 bits (466), Expect = 6.432e-53
Identity = 122/319 (38.24%), Postives = 171/319 (53.61%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQ--SVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLK----------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  +E MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E SR+   KR+K K            +++ +   KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   31 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDEMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPSRQAPNKRRKRKISGGSTISGGGGANTNSNNKKKSPGSGFPLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 346
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Medaka
Match: ldb1b (LIM domain-binding protein 1 [Source:NCBI gene;Acc:101158085])

HSP 1 Score: 183.726 bits (465), Expect = 8.230e-53
Identity = 122/319 (38.24%), Postives = 171/319 (53.61%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLK----------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  +E MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E SR+   KR+K K            +++ +   KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   25 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDEMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPSRQAPNKRRKRKISGGSTISGGGGANTNSNNKKKSPGSGFPLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 340
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Medaka
Match: ldb1b (LIM domain-binding protein 1 [Source:NCBI gene;Acc:101158085])

HSP 1 Score: 184.882 bits (468), Expect = 1.001e-52
Identity = 122/319 (38.24%), Postives = 171/319 (53.61%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLK----------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  +E MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E SR+   KR+K K            +++ +   KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:   68 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDEMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPSRQAPNKRRKRKISGGSTISGGGGANTNSNNKKKSPGSGFPLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 383
[Close]
BLAST of Lim domain binding protein, putative vs. Ensembl Medaka
Match: ldb1b (LIM domain-binding protein 1 [Source:NCBI gene;Acc:101158085])

HSP 1 Score: 185.652 bits (470), Expect = 1.677e-52
Identity = 123/319 (38.56%), Postives = 169/319 (52.98%), Query Frame = 3 
Query:  543 TECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFA-DDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPP--QSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDH----ITYCGIP---IYLLRFLQITKMMQE------SFRQKPKLI--------WQPMIA-PIESSRRT-YKRKKLKDASSSLAVK----------PKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFD---GLVNDKMLNKSP 1382
            T+ RI E N+RLQ  TE CDN WWDA  T+FFE++A+L ITF  +D P ++ + R +IPRYFRS+F+ G +E +Y ++  +  +  + +  D D   M+    + G P    V VEGRL L F  +E MRIK+W F IR +RE I ++I   +  +    D     IT CG+    +  LR   I + MQE      ++   P+          WQ M+A P E SR+   KR+K K +  S               KKSP      +SQ  DV+VVGEP LMG E+   DE  ITRLEN QFD   G+ ++   N SP
Sbjct:  129 TDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVT---QNGKPMFTQVCVEGRLYLEFMFDEMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYSLSPRDCLKTCLFQKWQRMVAPPAEPSRQAPNKRRKRKISGGSTISGGGGANTNSNNKKKSPGSGFPLSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEDSFNNSP 444
[Close]
BLAST of Lim domain binding protein, putative vs. Planmine SMEST
Match: SMESG000047533.1 (SMESG000047533.1)

HSP 1 Score: 955.281 bits (2468), Expect = 0.000e+0
Identity = 480/498 (96.39%), Postives = 480/498 (96.39%), Query Frame = 3 
Query:   54 MNNNMPSMMHGNAQYQSAVIHKNSVPMVEPGTSVMFPNKYIQNGNSQIHDREIGFPVCTMGPNQQGLMMHNPNGHIGQNRNMPMIQNSYGPMGPNPNMYIGQIPNGHMGPNPQALMIQNPHGPINPNINCQISSNQHGIMSQVTPDMVLANFNQARSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDHITYCGIPIYLLRFLQITKMMQESFRQKPKLIWQPMIAPIESSRRTYKRKKLKDASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINRPKLXXXXXXXXXXXXXXXIT------------------DLSPIYPPEN 1493
            MNNNMPSMMHGNAQYQSAVIHKNSVPMVEPGTSVMFPNKYIQNGNSQIHDREIGFPVCTMGPNQQGLMMHNPNGHIGQNRNMPMIQNSYGPMGPNPNMYIGQIPNGHMGPNPQALMIQNPHGPINPNINCQISSNQHGIMSQVTPDMVLANFNQARSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDHITYCGIPIYLLRFLQITKMMQESFRQKPKLIWQPMIAPIESSRRTYKRKKLKDASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINRPKLNKSGSVNSSSNSQHSIT                  DLSPIYPPEN
Sbjct:    1 MNNNMPSMMHGNAQYQSAVIHKNSVPMVEPGTSVMFPNKYIQNGNSQIHDREIGFPVCTMGPNQQGLMMHNPNGHIGQNRNMPMIQNSYGPMGPNPNMYIGQIPNGHMGPNPQALMIQNPHGPINPNINCQISSNQHGIMSQVTPDMVLANFNQARSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDHITYCGIPIYLLRFLQITKMMQESFRQKPKLIWQPMIAPIESSRRTYKRKKLKDASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINRPKLNKSGSVNSSSNSQHSITGIDQMPYFYSNTPDTKNSDLSPIYPPEN 498
[Close]
BLAST of Lim domain binding protein, putative vs. Planmine SMEST
Match: SMESG000047533.1 (SMESG000047533.1)

HSP 1 Score: 502.286 bits (1292), Expect = 1.440e-178
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 3 
Query:  708 MIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDHITYCGIPIYLLRFLQITKMMQESFRQKPKLIWQPMIAPIESSRRTYKRKKLKDASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINRPKLXXXXXXXXXXXXXXXITDLSPIYPPEN 1493
            MIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDHITYCGIPIYLLRFLQITKMMQESFRQKPKLIWQPMIAPIESSRRTYKRKKLKDASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINRPKLNKSGSVNSSSNSQHSITDLSPIYPPEN
Sbjct:    1 MIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNSTDHITYCGIPIYLLRFLQITKMMQESFRQKPKLIWQPMIAPIESSRRTYKRKKLKDASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINRPKLNKSGSVNSSSNSQHSITDLSPIYPPEN 262
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BLAST of Lim domain binding protein, putative vs. Planmine SMEST
Match: SMESG000005149.1 (SMESG000005149.1)

HSP 1 Score: 294.278 bits (752), Expect = 2.871e-93
Identity = 180/475 (37.89%), Postives = 252/475 (53.05%), Query Frame = 3 
Query:   54 MNNNMPSMMHGNAQYQSAVIHKNSVPMVEPGTSVMFPNKY-----IQNGNSQIHDREIGFPVCTMGPNQQGLMMHNPNGHIGQNRNMPMIQNSYGPMGPNPNMYIGQIPNGHMGPNPQALMIQNPHGPINPNINCQISSNQHGIMSQVTPDMVLANFNQARSNTQYPFT-ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNS----TDHITYCGIPIYLLRFLQITKMM---------QESFRQKPKLI--------WQPMIAP------IESSRRTYKRKKLK------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVND 1361
            MN  MPS+M G              PM++ G  ++ PN+Y     + +GN  +HDREI                                            M    +P G MGPNP   M         P++   +    H   +     M        R N  Y  + +CR+NEFNRRLQ+RTE CDN WWD LIT+FFEE+A+L +TF D+ P ++ + R +IPRYFRS+FDSGC+EY+YF+RS R  Y  +TIV DS+SA M+M+FP+  PP ++TVEGRL+L FN +E MRI+SWTF IRN+RE+IL+++ G            + ++T CGIP + + F +I  ++         Q+++   PK          WQ M+AP       ES+R+T KR+K K      D++S+ + K K+SP     N +QP DV++VGEP LMG E+   DE SITRLEN Q+D   N+
Sbjct:    1 MNLRMPSIMSG--------------PMMDSGVPMLHPNQYALAGMMPHGNPHLHDREI--------------------------------------------MIGSGMPVGAMGPNPHGGM---------PHLGPHMMHPHHPHHNHPNLPM-------GRGNNPYMASIDCRLNEFNRRLQQRTEDCDNIWWDTLITEFFEEDAVLTVTFTDEGPKRYTIGRTLIPRYFRSIFDSGCTEYYYFLRSVRESYHTNTIVVDSESAQMVMTFPRTLPPTTITVEGRLLLDFNFDELMRIRSWTFQIRNHREFILRSMPGFGCNQEQMLMEFSKNVTRCGIPNFTMNFFRICTILEPMQELMSRQKAYSLSPKDCLKTTLFQKWQRMVAPPGQQQKSESNRQTSKRRKRKGSNANSDSASNRSSKRKQSPVPSLPNLNQPGDVMIVGEPTLMGGEFGDEDERSITRLENTQYDASGNN 401
[Close]
BLAST of Lim domain binding protein, putative vs. Planmine SMEST
Match: SMESG000005149.1 (SMESG000005149.1)

HSP 1 Score: 295.049 bits (754), Expect = 5.964e-93
Identity = 164/388 (42.27%), Postives = 235/388 (60.57%), Query Frame = 3 
Query:  300 PMIQNSYGPMGPNPNMYIGQIPNGHMGPNPQALMIQNPHGPINPNINCQISSNQHGIMSQVTPDMVLANFNQARSNTQYPFT-ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNS----TDHITYCGIPIYLLRFLQITKMM---------QESFRQKPKLI--------WQPMIAP------IESSRRTYKRKKLK------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVND 1361
            PM+ +    + PN     G +P+G+   + + +MI  P G + PN +  +      +M    P     N    R N  Y  + +CR+NEFNRRLQ+RTE CDN WWD LIT+FFEE+A+L +TF D+ P ++ + R +IPRYFRS+FDSGC+EY+YF+RS R  Y  +TIV DS+SA M+M+FP+  PP ++TVEGRL+L FN +E MRI+SWTF IRN+RE+IL+++ G            + ++T CGIP + + F +I  ++         Q+++   PK          WQ M+AP       ES+R+T KR+K K      D++S+ + K K+SP     N +QP DV++VGEP LMG E+   DE SITRLEN Q+D   N+
Sbjct:   12 PMMDSGVPMLHPNQYALAGMMPHGNPHLHDREIMIGMPVGAMGPNPHGGMPHLGPHMMHPHHPHHNHPNLPMGRGNNPYMASIDCRLNEFNRRLQQRTEDCDNIWWDTLITEFFEEDAVLTVTFTDEGPKRYTIGRTLIPRYFRSIFDSGCTEYYYFLRSVRESYHTNTIVVDSESAQMVMTFPRTLPPTTITVEGRLLLDFNFDELMRIRSWTFQIRNHREFILRSMPGFGCNQEQMLMEFSKNVTRCGIPNFTMNFFRICTILEPMQELMSRQKAYSLSPKDCLKTTLFQKWQRMVAPPGQQQKSESNRQTSKRRKRKGSNANSDSASNRSSKRKQSPVPSLPNLNQPGDVMIVGEPTLMGGEFGDEDERSITRLENTQYDASGNN 399
[Close]
BLAST of Lim domain binding protein, putative vs. Planmine SMEST
Match: SMESG000005149.1 (SMESG000005149.1)

HSP 1 Score: 294.664 bits (753), Expect = 7.563e-93
Identity = 164/388 (42.27%), Postives = 235/388 (60.57%), Query Frame = 3 
Query:  300 PMIQNSYGPMGPNPNMYIGQIPNGHMGPNPQALMIQNPHGPINPNINCQISSNQHGIMSQVTPDMVLANFNQARSNTQYPFT-ECRINEFNRRLQERTEACDNEWWDALITDFFEENAILNITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGSTIVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRNNREYILKTITGPNDTNSNS----TDHITYCGIPIYLLRFLQITKMM---------QESFRQKPKLI--------WQPMIAP------IESSRRTYKRKKLK------DASSSLAVKPKKSPNIFQMNTSQPSDVVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVND 1361
            PM+ +    + PN     G +P+G+   + + +MI  P G + PN +  +      +M    P     N    R N  Y  + +CR+NEFNRRLQ+RTE CDN WWD LIT+FFEE+A+L +TF D+ P ++ + R +IPRYFRS+FDSGC+EY+YF+RS R  Y  +TIV DS+SA M+M+FP+  PP ++TVEGRL+L FN +E MRI+SWTF IRN+RE+IL+++ G            + ++T CGIP + + F +I  ++         Q+++   PK          WQ M+AP       ES+R+T KR+K K      D++S+ + K K+SP     N +QP DV++VGEP LMG E+   DE SITRLEN Q+D   N+
Sbjct:    8 PMMDSGVPMLHPNQYALAGMMPHGNPHLHDREIMIGMPVGAMGPNPHGGMPHLGPHMMHPHHPHHNHPNLPMGRGNNPYMASIDCRLNEFNRRLQQRTEDCDNIWWDTLITEFFEEDAVLTVTFTDEGPKRYTIGRTLIPRYFRSIFDSGCTEYYYFLRSVRESYHTNTIVVDSESAQMVMTFPRTLPPTTITVEGRLLLDFNFDELMRIRSWTFQIRNHREFILRSMPGFGCNQEQMLMEFSKNVTRCGIPNFTMNFFRICTILEPMQELMSRQKAYSLSPKDCLKTTLFQKWQRMVAPPGQQQKSESNRQTSKRRKRKGSNANSDSASNRSSKRKQSPVPSLPNLNQPGDVMIVGEPTLMGGEFGDEDERSITRLENTQYDASGNN 395
The following BLAST results are available for this feature:
BLAST of Lim domain binding protein, putative vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
LDB11.164e-5237.93LIM domain binding 1 [Source:HGNC Symbol;Acc:HGNC:... [more]
LDB12.823e-5237.93LIM domain binding 1 [Source:HGNC Symbol;Acc:HGNC:... [more]
LDB13.675e-5137.93LIM domain binding 1 [Source:HGNC Symbol;Acc:HGNC:... [more]
LDB22.252e-5036.14LIM domain binding 2 [Source:HGNC Symbol;Acc:HGNC:... [more]
LDB21.800e-4935.51LIM domain binding 2 [Source:HGNC Symbol;Acc:HGNC:... [more]
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BLAST of Lim domain binding protein, putative vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ldb-12.319e-1329.21F58A3.1a; LIM Domain Binding protein [Source:UniP... [more]
ldb-12.319e-1329.21F58A3.1a; LIM Domain Binding protein [Source:UniP... [more]
ldb-12.851e-1329.65F58A3.1a; LIM Domain Binding protein [Source:UniP... [more]
ldb-15.177e-1329.59F58A3.1a; LIM Domain Binding protein [Source:UniP... [more]
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BLAST of Lim domain binding protein, putative vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Chi1.259e-4535.90gene:FBgn0013764 transcript:FBtr0072191[more]
Chi1.866e-4535.58gene:FBgn0013764 transcript:FBtr0072192[more]
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BLAST of Lim domain binding protein, putative vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ldb1b1.838e-5136.88LIM-domain binding 1b [Source:ZFIN;Acc:ZDB-GENE-99... [more]
ldb1b3.388e-5136.88LIM-domain binding 1b [Source:ZFIN;Acc:ZDB-GENE-99... [more]
ldb1b3.518e-5136.88LIM-domain binding 1b [Source:ZFIN;Acc:ZDB-GENE-99... [more]
ldb1a1.140e-4836.79LIM domain binding 1a [Source:NCBI gene;Acc:30579][more]
ldb2a9.230e-4634.13LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-99... [more]
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BLAST of Lim domain binding protein, putative vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
sae11.619e-5237.93SUMO1 activating enzyme subunit 1 [Source:Xenbase;... [more]
sae12.072e-5237.93SUMO1 activating enzyme subunit 1 [Source:Xenbase;... [more]
sae12.168e-5237.93SUMO1 activating enzyme subunit 1 [Source:Xenbase;... [more]
sae12.260e-5237.93SUMO1 activating enzyme subunit 1 [Source:Xenbase;... [more]
cldn8.18.182e-4935.74claudin 8, gene 1 [Source:Xenbase;Acc:XB-GENE-1013... [more]
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BLAST of Lim domain binding protein, putative vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Ldb16.976e-5337.93LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:89... [more]
Ldb16.976e-5337.93LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:89... [more]
Ldb11.511e-5237.93LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:89... [more]
Ldb11.511e-5237.93LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:89... [more]
Ldb11.200e-5137.93LIM domain binding 1 [Source:MGI Symbol;Acc:MGI:89... [more]
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BLAST of Lim domain binding protein, putative vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P70060|LDB1_XENLA4.584e-5237.93LIM domain-binding protein 1 OS=Xenopus laevis OX=... [more]
sp|P70662|LDB1_MOUSE1.057e-5137.93LIM domain-binding protein 1 OS=Mus musculus OX=10... [more]
sp|Q86U70|LDB1_HUMAN1.356e-5137.93LIM domain-binding protein 1 OS=Homo sapiens OX=96... [more]
sp|O42252|LDB1_CHICK1.399e-5137.93LIM domain-binding protein 1 OS=Gallus gallus OX=9... [more]
sp|Q6NVL6|LDB1_XENTR9.409e-5137.93LIM domain-binding protein 1 OS=Xenopus tropicalis... [more]
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BLAST of Lim domain binding protein, putative vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0B7ASB99.853e-5435.04LID domain-containing protein OS=Arion vulgaris OX... [more]
A0A0B7APM81.008e-5335.04LID domain-containing protein OS=Arion vulgaris OX... [more]
A0A0B7AS613.128e-5337.35LID domain-containing protein OS=Arion vulgaris OX... [more]
A0A0V0J1374.227e-5338.41LIM domain-binding protein 2 (Fragment) OS=Schisto... [more]
A0A3Q0IRJ05.499e-5238.91LIM domain-binding protein 2 OS=Diaphorina citri O... [more]
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BLAST of Lim domain binding protein, putative vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ldb2a1.156e-5237.03LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-99... [more]
ldb1a7.673e-4936.56LIM domain binding 1a [Source:NCBI gene;Acc:30579][more]
ldb1b4.105e-4836.36LIM domain-binding protein 1 [Source:NCBI gene;Acc... [more]
ldb1b4.321e-4835.26LIM domain-binding protein 1 [Source:NCBI gene;Acc... [more]
ldb2b2.783e-4432.72LIM domain-binding protein 2-like [Source:NCBI gen... [more]
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BLAST of Lim domain binding protein, putative vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
LDB21.097e-755.32LIM domain binding 2 [Source:HGNC Symbol;Acc:HGNC:... [more]
ENSPMAT00000005039.18.038e-642.55pep scaffold:Pmarinus_7.0:GL480470:8268:13407:1 ge... [more]
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BLAST of Lim domain binding protein, putative vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Lim domain binding protein, putative vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
LDB3.226e-4634.85Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO279101.826e-3537.23Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Lim domain binding protein, putative vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ldb1b6.432e-5338.24LIM domain-binding protein 1 [Source:NCBI gene;Acc... [more]
ldb1b6.432e-5338.24LIM domain-binding protein 1 [Source:NCBI gene;Acc... [more]
ldb1b8.230e-5338.24LIM domain-binding protein 1 [Source:NCBI gene;Acc... [more]
ldb1b1.001e-5238.24LIM domain-binding protein 1 [Source:NCBI gene;Acc... [more]
ldb1b1.677e-5238.56LIM domain-binding protein 1 [Source:NCBI gene;Acc... [more]
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BLAST of Lim domain binding protein, putative vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000047533.10.000e+096.39SMESG000047533.1[more]
SMESG000047533.11.440e-178100.00SMESG000047533.1[more]
SMESG000005149.12.871e-9337.89SMESG000005149.1[more]
SMESG000005149.15.964e-9342.27SMESG000005149.1[more]
SMESG000005149.17.563e-9342.27SMESG000005149.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30030888 ID=SMED30030888|Name=Lim domain binding protein, putative|organism=Schmidtea mediterranea sexual|type=transcript|length=1540bp
TCTTCCGATCTATTCACTAGAATAAAATATCAGCAAAATTTTACGATTTT
ATAATGAACAATAATATGCCATCTATGATGCATGGCAATGCACAATATCA
GTCAGCTGTTATTCATAAAAACTCGGTTCCAATGGTTGAACCTGGCACGT
CTGTGATGTTTCCTAATAAGTACATTCAAAATGGAAACTCTCAAATACAT
GATCGAGAAATAGGATTTCCTGTTTGTACAATGGGACCAAATCAACAAGG
ATTAATGATGCATAATCCAAATGGGCATATCGGACAAAATCGAAATATGC
CAATGATACAAAATTCATATGGACCAATGGGACCAAATCCAAATATGTAT
ATAGGACAGATTCCAAATGGACATATGGGGCCAAATCCACAAGCGCTAAT
GATTCAAAATCCGCATGGGCCTATAAATCCAAATATCAATTGTCAAATTT
CATCAAATCAACATGGGATTATGTCTCAAGTCACACCTGACATGGTACTA
GCAAACTTTAACCAGGCTAGAAGTAATACCCAATATCCCTTCACTGAATG
TAGAATAAATGAATTTAATAGGCGTCTTCAAGAAAGAACTGAAGCCTGTG
ATAATGAATGGTGGGATGCTTTAATAACAGATTTTTTCGAGGAGAACGCT
ATATTAAATATAACATTTGCTGATGACAGGCCGCATAAATTTTGTCTTTG
TCGTGCAATGATTCCTCGTTATTTTCGAAGCGTTTTTGACAGTGGCTGCA
GTGAATATTTCTATTTTATGCGTTCGGCACGAAATTATTATAGTGGTTCT
ACAATTGTAACAGACAGTGACTCGGCTTTAATGATAATGTCTTTCCCAAA
ATTTGGCCCCCCTCAATCAGTGACAGTAGAAGGAAGATTAGTATTAGTTT
TCAACAATAATGAGACAATGCGCATTAAAAGTTGGACTTTTGATATTAGA
AATAACCGAGAATATATTTTAAAAACAATAACAGGACCGAATGATACTAA
TAGCAATAGCACGGATCACATCACATATTGCGGAATTCCGATTTATCTAC
TCCGATTTTTACAGATTACTAAAATGATGCAAGAATCCTTTAGACAAAAG
CCAAAACTAATCTGGCAACCCATGATTGCTCCTATAGAATCATCACGTAG
AACTTACAAGCGAAAGAAACTGAAAGATGCAAGTTCCAGTTTAGCAGTTA
AACCGAAAAAAAGTCCAAATATATTCCAAATGAACACAAGCCAACCGTCG
GATGTCGTAGTTGTTGGTGAACCAATTTTAATGGGCGACGAATACGCTGG
AGTGGATGAACATTCAATTACTCGATTAGAAAATATCCAATTTGACGGAT
TAGTAAATGATAAAATGTTAAACAAATCTCCGAATACTCGAAAAATAAAT
CGACCCAAACTAAACAAATCAGGTTCAGTGAACAGCAGTAGTAACAGTCA
GCATTCCATTACAGATTTATCACCAATTTATCCACCTGAAAATTGATTTC
CAAAACTTCGATGCTAGAAATTCGAATACTTTATTTTACC
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protein sequence of SMED30030888-orf-1

>SMED30030888-orf-1 ID=SMED30030888-orf-1|Name=SMED30030888-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=481bp
MNNNMPSMMHGNAQYQSAVIHKNSVPMVEPGTSVMFPNKYIQNGNSQIHD
REIGFPVCTMGPNQQGLMMHNPNGHIGQNRNMPMIQNSYGPMGPNPNMYI
GQIPNGHMGPNPQALMIQNPHGPINPNINCQISSNQHGIMSQVTPDMVLA
NFNQARSNTQYPFTECRINEFNRRLQERTEACDNEWWDALITDFFEENAI
LNITFADDRPHKFCLCRAMIPRYFRSVFDSGCSEYFYFMRSARNYYSGST
IVTDSDSALMIMSFPKFGPPQSVTVEGRLVLVFNNNETMRIKSWTFDIRN
NREYILKTITGPNDTNSNSTDHITYCGIPIYLLRFLQITKMMQESFRQKP
KLIWQPMIAPIESSRRTYKRKKLKDASSSLAVKPKKSPNIFQMNTSQPSD
VVVVGEPILMGDEYAGVDEHSITRLENIQFDGLVNDKMLNKSPNTRKINR
PKLNKSGSVNSSSNSQHSITDLSPIYPPEN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003712transcription cofactor activity
GO:0050660flavin adenine dinucleotide binding
GO:0071949FAD binding
GO:0000989transcription factor activity, transcription factor binding
GO:0005515protein binding
GO:0008134transcription factor binding
GO:0030274LIM domain binding
GO:0042802identical protein binding
GO:0042803protein homodimerization activity
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002089reproductive organ
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR029005LIM-bd/SEUSS
IPR041363LID
IPR030174LDB2
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
Vocabulary: biological process
TermDefinition
GO:0006357regulation of transcription from RNA polymerase II promoter
GO:0007275multicellular organism development
GO:0045893positive regulation of transcription, DNA-templated
GO:0045944positive regulation of transcription from RNA polymerase II promoter
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.10.110.10coord: 395..472
e-value: 1.5E-6
score: 29.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..480
IPR029005LIM-domain binding protein/SEUSSPFAMPF01803LIM_bindcoord: 167..307
e-value: 7.5E-24
score: 84.6
IPR029005LIM-domain binding protein/SEUSSPANTHERPTHR10378LIM DOMAIN-BINDING PROTEINcoord: 164..463
IPR041363LIM interaction domainPFAMPF17916LIDcoord: 400..427
e-value: 8.8E-9
score: 34.9
IPR030174LIM domain-binding protein 2PANTHERPTHR10378:SF8LIM DOMAIN-BINDING PROTEIN 2coord: 164..463