Protocadherin gamma
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30030878 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of Protocadherin gamma vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 254.218 bits (648), Expect = 9.751e-70 Identity = 234/807 (29.00%), Postives = 375/807 (46.47%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT P Q S + +T++D NDNSPKF + + EN + VG++ TD D G+N + +L N N+NF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSIL-NDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHT 766 HSP 2 Score: 132.88 bits (333), Expect = 9.749e-31 Identity = 160/585 (27.35%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ FDRE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GEN A +S+ ND D F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDADAGENKAV--TLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 254.218 bits (648), Expect = 3.240e-69 Identity = 235/808 (29.08%), Postives = 375/808 (46.41%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT P Q S + +T++D NDNSPKF + F EN + VG++ TD D G+N + +L N N+NF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSIL-NDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHT 766 HSP 2 Score: 132.494 bits (332), Expect = 1.340e-30 Identity = 160/585 (27.35%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ FDRE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GEN A +S+ ND D F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDADAGENKAV--TLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 254.218 bits (648), Expect = 3.777e-69 Identity = 235/808 (29.08%), Postives = 375/808 (46.41%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT P Q S + +T++D NDNSPKF + F EN + VG++ TD D G+N + +L N N+NF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSIL-NDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHT 766 HSP 2 Score: 132.494 bits (332), Expect = 1.402e-30 Identity = 160/585 (27.35%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ FDRE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GEN A +S+ ND D F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDADAGENKAV--TLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. Ensembl Human
Match: PCDH9 (protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]) HSP 1 Score: 253.832 bits (647), Expect = 4.887e-69 Identity = 235/808 (29.08%), Postives = 375/808 (46.41%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT P Q S + +T++D NDNSPKF + F EN + VG++ TD D G+N + +L N N+NF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSIL-NDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHT 766 HSP 2 Score: 132.494 bits (332), Expect = 1.339e-30 Identity = 160/585 (27.35%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ FDRE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GEN A +S+ ND D F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDADAGENKAV--TLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. Ensembl Human
Match: PCDH11Y (protocadherin 11 Y-linked [Source:HGNC Symbol;Acc:HGNC:15813]) HSP 1 Score: 249.98 bits (637), Expect = 3.267e-68 Identity = 236/824 (28.64%), Postives = 382/824 (46.36%), Query Frame = 1
Query: 55 VKQDTMKQIKCSLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLS---TQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCP-----DHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSS----QYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKIL 2451
V+ +T KC L YIF L+ +++ Q + Y I+E P IG + +D+ LS + + + K+ Y+ + + I T ID E+LC +HC Y V + ++++ ++D+NDN P F + I S+ E + L A+D DV + Y+L +I+ + D P L+++K LD E Y + + + + + + + V + ND P FK+ + EVS+ EN P+ + + Q+ A D D E+++I + ++ S + F + ++ G I +K PLD E T H + V ASD A V++ V DVND P ++ NP + E P N I IT+ D+D++ NG+++C+ + + +P F ++ L D E T + K++ A K PL + + + + D NDN P+F ++ +VSI ENN +++KV+ATD D G N + Y + PE F +D +G +T KLDREKE Y I+AKD G P TS+ T+ ++IID NDNSP F + K + EN VG++ TD D GDN + +L + N++F + G ++ FDRE + Y ++ D G+ S + V IN++DVNDN P I P Y+ Y + ST +PG + + A D D G NA + I N D+F+ID + G + + K +G + V + D G+P + S I+
Sbjct: 13 VRVNTTNCHKCLLSGTYIFAVLLVCVVFHSGAQEKN---YTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHC-------FYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPEN-SAINSKYTLPAAVDPDVGI-NGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH-NGRVTCFTDHEIPFR----LRP-----VFSNQFLLENAAYLDYESTKEYAIKLLAA---DAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLG--PDAPPE---FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPP--LTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-DENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST--------------NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIV 789 HSP 2 Score: 146.747 bits (369), Expect = 4.587e-35 Identity = 105/359 (29.25%), Postives = 176/359 (49.03%), Query Frame = 1
Query: 1423 TSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GP--KKLEIFENEKPGTEVGILIATDNDEGDNGKLL--------FKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
+ST + +++ D NDN P+F++ VSI EN PV V ++ ATD DIG N + + NL S N + LF +++ +G +T LDRE+ ++L+++A D G MP + + +V ++I P + + EN T++ ++ TD D NG++ F+L P + F L++A D E+T Y +++ D GK PL+ + + I + D NDN P +F + +T+ + SPG +++K A+D D G NA ++ + P+ P FS+D + G+L V +KL +E Y I+ +DNG P + + V I D
Sbjct: 251 SSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFL-------LENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAP--VF---------------TQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLG-PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIID 583 HSP 3 Score: 122.094 bits (305), Expect = 2.001e-27 Identity = 151/573 (26.35%), Postives = 238/573 (41.54%), Query Frame = 1
Query: 808 NINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSKG---QIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVI---TVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+IND P F +S+ EN INS AVD D ++ E+ F Q+ +++ LD E +++ V+ D F + I +V D ND P F I E P + Q+ D D N K+ + N +F L++ T + + DREET + V+ + + + + + + D+NDN P I +V + EN P++ K+ +T TDKD NG VT D+ L + S+ + LD E Y + ++A D G P Q S + I + D NDN+P F + I EN PG ++ + ATD D G N ++ + L P+ F G L K+ DRE D+Y I D G PL+ TV ++I+D NDN P +Y K+ +N L + + G +D D G+N+A +S+ ++ D F+ID Q G++R +E Y + ED G+ S+ S K+ + + D+
Sbjct: 152 DINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADI-GENAKIHFSFSNLVSNIARRLFH--LNATTGL----ITIKEPLDREETPNHKLLVL-----ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFR----LRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ--SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY--KFYVPEN-----------LPRHGTVGL----ITVTDPDYGDNSA--VTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDV 687
BLAST of Protocadherin gamma vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 182.57 bits (462), Expect = 2.686e-46 Identity = 179/596 (30.03%), Postives = 288/596 (48.32%), Query Frame = 1
Query: 415 VVNVWDGL--SLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDAD----IYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFS---VSSKGQIF-----LKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY----GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIG-PKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL----TINGSLQ--SAKEFDRET-TDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRL 2124
V+ DG +L + + INV D+ND+ PT + + + +++E + +G+ + AID D S + + Y ++ I D+ ++K T K LD E Y+L + A + + T +I + + +IND P F +++Y V++ E +P S II ++AVD DED +ITYR + + FS + +G I LKR D + +++ A+D VV +D + AP FN +P +I E P + IT+ D + + R +Y+ +DS F+ D+ DRE+ V A PL ++ I + + DINDN+P F + Y+ +I E+ PV ++V+A D DIG NG+V Y + N S +P LF +D SG + + KLDRE+ + L I A+D+GT P +S I +T+ DVNDN+P F L I EN G+ VG ++A D DEGDN + F++ + F + NG ++ + EFD E +++ +++ + LS T V I++ DVNDN P L
Sbjct: 448 VIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENV-AIGEEVGRVYAIDED-SGPNGIIKYSMEGSEDFIIDEDSGLIKTT----------KLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQ-DHKVR----VEISATDQGGLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPV--ITLKAEDHDRGDNA------RIVYS---------IDSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDH---ASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFL-NESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGT-PSLSAAS-EITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQAS---SGQLSSTVPVRIHVSDVNDNKPAL 1000 HSP 2 Score: 145.591 bits (366), Expect = 6.534e-35 Identity = 163/544 (29.96%), Postives = 255/544 (46.88%), Query Frame = 1
Query: 832 FKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSA----DFSSQ-YFSVSS-KGQIFLKRPLDFETTSLHLIDVQA---SDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGK----LSCWEPRNLY---NKQAVI-FKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKL-EIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFS---IDPQIGILRVKRKLKKELIGDYNVQI 2400
F+Q+KY + E+ PI ++I V+A S+ Y S D SQ F++ + G+I L + +D E H++ V A D +A+T VV+ V+DV D +P F + F I E P + + D DS NG+ L +NL K VI PLD +T + +R D +I D G K ST + +T+ D+NDN P+F Y+V+I EN + A + V ATD+D G NG V Y + + + ID +G VT ++D K S +I AKD G P +S+ + I +ID+ND++P I +K+ + EN G EVG + A D D G NG + + + +E+F +G +++ K DRETT RY L++ D G L+ + T+ + + D+NDN P T K+ + +S G +I+ +A D DE + + + D ++FS I Q IL V +LK++ D+ V++
Sbjct: 165 FQQEKYVKELPEDTPIETIIASVKA--SHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDS-GENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRETL-------SLIRLD-----------VIASDKGTPKR--ESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMASSSGIGG----LTIDYSTGEVTLRERID-AKNSPITAVIRAKD-GAQPA-LSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSM--EGSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAP-----------------TFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEA---DREVFSILDIGDQGAILSVSGELKRQ---DHKVRV 653 HSP 3 Score: 141.739 bits (356), Expect = 1.044e-33 Identity = 190/757 (25.10%), Postives = 316/757 (41.74%), Query Frame = 1
Query: 178 IKENQP---GQTRIGKISEDVPLSTQMI---LRNLSEKINYRFQKQLS------YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTND-SFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLS----ITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDED-SEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAA-KNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-GTEVGILIATDNDEGDNGKLLFKLLPNHNE---NFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYE-SP-GFEILKCEASDLDEGENAAFHFRISLPNDPDIFSID---PQIGILRV 2352
+++N P + G+I ED P+ T ++ R+L N + L +++ + +++T +D E L + +L ++ + + VEI V DVNDN P F + S ++ E I + + KA D D K+ + S + + +T D S + L++ +D + N I A D + LS +TI V++IND P + +++EEN+ I + +V A+DED + I S + S + G I + LD ETT+ + + V A D N +T + + + D+ND AP F+ I E P I + D D + Q + ++ + + D+ + + + + A + L +++ I D+N + P F +SV I E++P+ VI + A D D G N + Y ID+ F ID SG ++ + LDRE + + +I+ A D + P +S I + + D+NDNSP+F + P GT + A D D G NG + + L + + F L +G+L+ + + DRE L I D+G LS + + + DVNDN P E ++ DL I E SP G + A D DEG+NA FRI D +F I+ Q G++R+
Sbjct: 263 VQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRETL--------SLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENIT-IPAVIATVKATDEDFGTNG-----KVHYSMASSSGIGGLTIDYSTGEVTLRERIDAK-----NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDED-----------------QKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDS-------SQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLN--TSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTF-------------------EQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRI 954 HSP 4 Score: 138.272 bits (347), Expect = 1.439e-32 Identity = 170/688 (24.71%), Postives = 301/688 (43.75%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSSQYFSVS---SKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYD---LYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLF-VID-SDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAF-HFRISLPNDPDI--FSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
V ++V DV DN P F S ++E +G ++ A D D S E+ + Y L + L N ++ LD E L L + A + +++ + I VV++ND P F Y V++ EN+ I ++I V+A DED + ++ Y A SS ++ S G++ L+ +D + + + + ++A D ++ + I V+D+ND AP +EE +G++ D DS NG + Y+ + S+ F D + T DRE T KV + L ++ TI++ + DINDN P F+K Y+V+I E P +++I + A D D + +TY I+ ++ +F ++D D G + + + ++ ++ I A D+G + + + ID +++P F P ++I E+ G V L A D+D GDN ++++ + + FF + +G + + + DRE + + + +D PL+ + + + + D+NDN P+ Y +I+ D+ + G L+ A D D G N +F + P I F +D G LRV KL +E + I D G PS + +I + + D+
Sbjct: 256 VVVHVLDVQDNSPIFEKDSYFGEIREDA-PIGTTVLSVFARDLD-SGENGEIEYSLGE---GNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMAS-SSGIGGLTIDYSTGEVTLRERIDAKNSPITAV-IRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDS-GPNGIIK-------YSMEG--------SEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPS---LNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIE-----EADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGR-----CVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI---DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSY-------------AATISEDIPV----GTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDV 885 HSP 5 Score: 117.472 bits (293), Expect = 3.442e-26 Identity = 105/354 (29.66%), Postives = 174/354 (49.15%), Query Frame = 1
Query: 1420 LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN---GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++++ T+ + + D+ DN+PIFEK Y I E+ P+ V+ V A D D G NG + Y + K+L I++ SG + LDRE S +L ++A DKGT PK++ S+ + IT++DVNDN+P F + I EN + + ATD D G NGK+ + + + LTI+ G + + D + + + I D + LS T + IN++D+ND+ P LI ++ IT++ ++ + G E+ + A D D G N + + D F ID G+++ + L +E Y++++ D G PS S I V ++DI
Sbjct: 250 ISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNG----KNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGT-PKRE-STAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMA--SSSGIGGLTIDYSTGEVTLRERIDAKNSPITAV-IRAKDGAQPALSSTVPLTINVIDINDHAPTLI---------------AAQKMITLEENV--AIGEEVGRVYAIDEDSGPNGIIKYSMEGSED---FIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDI 574 HSP 6 Score: 75.0998 bits (183), Expect = 2.596e-13 Identity = 109/469 (23.24%), Postives = 201/469 (42.86%), Query Frame = 1
Query: 217 ISEDVPLSTQMI-LRNLS----EKINYRFQKQ----LSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKD 1566
ISE++P +Q+I L+ + +KI YR ++ S + +IL + + DH ++ + ++ D L+G V + + DVN + P F + E +G + KA D D ++ + Y +D+ + ++ S I V LD E +++ + A + + T I + + +IND P+F Y ++ E++P+ + +QV A+D D D + S+ S Q F + + G + + LD E ++ ++ + A D +A +++ +T+ DVND AP F I E P +G I D D E N +S R A +F D++ G + TR FD E + + A+ L+ST+ + + ++D+NDN P + V ++ +N + ++ + A D D
Sbjct: 590 ISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQ----DH-------KVRVEISATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEH-SPIGYPVITLKAEDHD-RGDNARIVYSIDSSQF-----FRIDPSSGDISV-SSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDAD-EGDNADISF---RIFGGADAKLFDIEEDAEQ-NGVVRILTRAEFDYEAKANKFFFELQ-----ASSGQLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAFDPD 1028 HSP 7 Score: 69.3218 bits (168), Expect = 1.577e-11 Identity = 44/179 (24.58%), Postives = 87/179 (48.60%), Query Frame = 1
Query: 1936 NHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ ++N F L T++G ++ AK DRE D++ L++ ++ +S + TV +++LDV DN P IF +K+S ++ G +L A DLD GEN + + N ++ +I+ + G+++ L +E + + +I D G P + + + + + D+
Sbjct: 207 SRSQNLFTLDTMSGEIRLAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSP--IF---------------EKDSYFGEIREDAPIGTTVLSVFARDLDSGENGEIEYSLGEGNGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKGTPKRESTAMVEITVVDV 368
BLAST of Protocadherin gamma vs. Ensembl Celegans
Match: fmi-1 (FlaMIngo (Cadherin plus 7TM domain) homolog [Source:UniProtKB/TrEMBL;Acc:A0A0K3AUS4]) HSP 1 Score: 181.415 bits (459), Expect = 5.555e-46 Identity = 179/596 (30.03%), Postives = 288/596 (48.32%), Query Frame = 1
Query: 415 VVNVWDGL--SLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDAD----IYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFS---VSSKGQIF-----LKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY----GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIG-PKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL----TINGSLQ--SAKEFDRET-TDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRL 2124
V+ DG +L + + INV D+ND+ PT + + + +++E + +G+ + AID D S + + Y ++ I D+ ++K T K LD E Y+L + A + + T +I + + +IND P F +++Y V++ E +P S II ++AVD DED +ITYR + + FS + +G I LKR D + +++ A+D VV +D + AP FN +P +I E P + IT+ D + + R +Y+ +DS F+ D+ DRE+ V A PL ++ I + + DINDN+P F + Y+ +I E+ PV ++V+A D DIG NG+V Y + N S +P LF +D SG + + KLDRE+ + L I A+D+GT P +S I +T+ DVNDN+P F L I EN G+ VG ++A D DEGDN + F++ + F + NG ++ + EFD E +++ +++ + LS T V I++ DVNDN P L
Sbjct: 89 VIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENV-AIGEEVGRVYAIDED-SGPNGIIKYSMEGSEDFIIDEDSGLIKTT----------KLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQ-DHKVR----VEISATDQGGLQGRCVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPV--ITLKAEDHDRGD------NARIVYS---------IDSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDH---ASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFL-NESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGT-PSLSAAS-EITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQAS---SGQLSSTVPVRIHVSDVNDNKPAL 641 HSP 2 Score: 135.576 bits (340), Expect = 8.553e-32 Identity = 173/651 (26.57%), Postives = 275/651 (42.24%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTND-SFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLS----ITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDED-SEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAA-KNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-GTEVGILIATDNDEGDNGKLLFKLLPNHNE---NFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYE-SP-GFEILKCEASDLDEGENAAFHFRISLPNDPDIFSID---PQIGILRV 2352
VEI V DVNDN P F + S ++ E I + + KA D D K+ + S + + +T D S + L++ +D + N I A D + LS +TI V++IND P + +++EEN+ I + +V A+DED + I S + S + G I + LD ETT+ + + V A D N +T + + + D+ND AP F+ I E P I + D D + Q + ++ + + D+ + + + + A + L +++ I D+N + P F +SV I E++P+ VI + A D D G N + Y ID+ F ID SG ++ + LDRE + + +I+ A D + P +S I + + D+NDNSP+F + P GT + A D D G NG + + L + + F L +G+L+ + + DRE L I D+G LS + + + DVNDN P E ++ DL I E SP G + A D DEG+NA FRI D +F I+ Q G++R+
Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENIT-IPAVIATVKATDEDFGTNG-----KVHYSMASSSGIGGLTIDYSTGEVTLRERIDAK-----NSPITAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDNDED-----------------QKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDS-------SQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLN--TSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTF-------------------EQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFGGADAKLFDIEEDAEQNGVVRI 595 HSP 3 Score: 124.02 bits (310), Expect = 3.067e-28 Identity = 144/578 (24.91%), Postives = 257/578 (44.46%), Query Frame = 1
Query: 790 ITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSSQYFSVS---SKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYD---LYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLF-VID-SDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAF-HFRISLPNDPDI--FSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I VV++ND P F Y V++ EN+ I ++I V+A DED + ++ Y A SS ++ S G++ L+ +D + + + + ++A D ++ + I V+D+ND AP +EE +G++ D DS NG + Y+ + S+ F D + T DRE T KV L ++ TI++ + DINDN P F+K Y+V+I E P +++I + A D D + +TY I+ ++ +F ++D D G + + + ++ ++ I A D+G + + + ID +++P F P ++I E+ G V L A D+D GDN ++++ + + FF + +G + + + DRE + + + +D PL+ + + + + D+NDN P+ Y +I+ D+ + G L+ A D D G N +F + P I F +D G LRV KL +E + I D G PS + +I + + D+
Sbjct: 2 VEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMAS-SSGIGGLTIDYSTGEVTLRERIDAKNSPITAV-IRAKDGAQPALSSTVPLTINVIDINDHAPTLIAAQKMITLEENVAIGEEVGRVYAIDEDS-GPNGIIK-------YSMEG--------SEDFIIDEDSGLIKTTKLLDRETTARYSLKVTARDM---GTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND--EDQKITYRIE-----EADREVFSILDIGDQGAILSVSGELKRQDHKVRVEISATDQGGLQGR-----CVVNVFIDDVNSAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSI---DSSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSY-------------AATISEDIPV----GTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDV 526 HSP 4 Score: 102.449 bits (254), Expect = 1.236e-21 Identity = 120/457 (26.26%), Postives = 204/457 (44.64%), Query Frame = 1
Query: 307 FVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL-DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNE---FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDS 1656
F++D ++ ++KT L+D E T L + SL + + ++D+NDN PTF ++ E + G + KA+D D E +TY++ +AD + F + D IL + L + K+ + I A + + +++ I VN P F + V + E+ PI +I ++A D D +++ I Y S D SSQ+F + S G I + LD E + + V ASD+ N +T++ + + D+ND +PQF + I E P Q++ D D NG + + + + +F+ S T L + DRE+ V + L++ I+LT++D+NDN P FE+ Y + I EN+PV + V + A D D G N +++ I + LF I+ D+
Sbjct: 165 FIIDEDSGLIKTTKLLDRE--------TTARYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEM-PRGSQIITLKAVDND---EDQKITYRIEEAD--REVFSILDIGDQGAILSVSGELKRQDHKV-RVEISATDQGGLQGRCVVNVFIDDVN---SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVY-SID-SSQFFRIDPSSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADI-GPNGIVDYFLNESSSSPSIQLFRLDRTSGT------LRVSSKLDREQFAVIVLPIFARDR---GTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDNADISFRIFG----GADAKLFDIEEDA 587 HSP 5 Score: 74.3294 bits (181), Expect = 4.254e-13 Identity = 108/469 (23.03%), Postives = 199/469 (42.43%), Query Frame = 1
Query: 217 ISEDVPLSTQMIL-----RNLSEKINYRFQKQ----LSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKD 1566
ISE++P +Q+I + +KI YR ++ S + +IL + + DH ++ + ++ D L+G V + + DVN + P F + E +G + KA D D ++ + Y +D+ + ++ S I V LD E +++ + A + + T I + + +IND P+F Y ++ E++P+ + +QV A+D D D + S+ S Q F + + G + + LD E ++ ++ + A D +A +++ +T+ DVND AP F I E P +G I D D E N +S R A +F D++ G + TR FD E + + A+ L+ST+ + + ++D+NDN P + V ++ +N + ++ + A D D
Sbjct: 231 ISEEMPRGSQIITLKAVDNDEDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQ----DH-------KVRVEISATDQGGLQGRCVVNVFIDDVN-SAPYFNDHPFSVKIPEH-SPIGYPVITLKAEDHD-RGDNARIVYSIDSSQF-----FRIDPSSGDISV-SSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISEDIPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLPIFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDAD-EGDNADIS---FRIFGGADAKLFDIEEDAEQ-NGVVRILTRAEFDYEAKANKFFFELQ-----ASSGQLSSTVPVRIHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAFDPD 669
BLAST of Protocadherin gamma vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 136.346 bits (342), Expect = 5.063e-32 Identity = 192/711 (27.00%), Postives = 308/711 (43.32%), Query Frame = 1
Query: 466 INVQDVNDNVPTFLTSSILKSVKEVIY-------GVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDT---FML-KVTNDSFPILVLKKALDYERCKLYNLAIWAWNS-----PADNQKTKLSITIRVV--NINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR--SADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVI---KVTATDKD--IGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLII--VAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-GTEVGILIATDNDE--GDNGKLLFKLLPNHNENFFYLTIN--------GSLQSAKEFDRETT---DRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDI-FSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ V+DVND VP F ++ E + GK + KAID D N V Y++ + + F + ++T + FP + D E+ +Y L + A + P N K ++ +++V ++ND P F++QKY V+E+ +I ++A D D+ S + Y A F V + G IF+K PLDFE + + + + ASD NA T V I + DVND APQF + E E++ I ++ ++A + S R +Y + + G +L + DR+ +V N L + + + DINDN+PIF + ++ E P+ + + V A D D N + Y I + +N E S+F ID ++G + A LDRE S + II A D+G ++ ++ I + D+NDN+P F + E P G V A D DE DN +F + ++FY+T + G L+ + D E D + L I ++D + H + ++D ND+ P + H +E + G I + A+D D G+ A FRI+ +DP F+ID Q G LRV L +E I YN+ I DN + + Q + V +QD+
Sbjct: 1199 VEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFP----NEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIE---EDVDIPKVLFNVHATDADQDEKSS---RIVYRLEGQGADEVFRIGKYSGTIELVKAL--DRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGE-SVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANV--TIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDN---VFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVH---VALVDRNDHAPHIHGATEHRV----------REDV--------PRGTSIGRYTATDRDAGDTA--RFRINRQSDPKRQFTID-QDGTLRVAHTLDREDIAVYNLIIEAYDNS--NNIGRQMVAVYLQDV 1865 HSP 2 Score: 122.479 bits (306), Expect = 1.081e-27 Identity = 153/581 (26.33%), Postives = 251/581 (43.20%), Query Frame = 1
Query: 454 IRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSV-EENLPINSMIIQVEAVDEDED---SEITYR-SADFSSQYFSVSS-KGQIFLKRPLDFE----TTSLHLIDVQASDNEFNA---NTKVVITVVDVNDEAPQFNLNPS--FCRIEEGQ----PENIIIGQITIWDRDSEAA-NGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKD-IGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMP-----KQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPP 2118
++V+I + DVNDN P+F + VKE G G + KA D D +H+ + Y L V DS I V K+ LD+E Y+L + A + ++ I + ++ND P+F+QQKY +V EE++ I ++ V A D D+D S I YR + + F + G I L + LD + S + + VQA D++ N V + V D+ND +P F P F IEE + + + + D D N + RN +F+ ++ + L + +RE + D G + +TI +T D+NDN P FEK Y S+EE P+ A V+ +A D D ++ + TY+ ++ E F + +D +++ + R K+ + +D + + + +++ ++D ND++P G + + E+ GT +G ATD D GD + + F + +G+L+ A DRE Y L IE D V + + DVNDN P
Sbjct: 1319 VKVQIVINDVNDNAPSFEEQKYIGRVKES-EGEGHDVITIKAHDLD---KHSNLRYHL-IGAGGGRIPFGVRTDSGTIFV-KEPLDFEASDQYHLVLIASDG---RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFV-VQAIDDDGNGLVGYADVQVNVRDINDNSPIF---PERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSERE-----FIIEVRANDRGVPSREGFANVTIKVT--DMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQ------LSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQ-FTIDQDGTLRVAHTLDREDIAVYNLIIEAYDNSNNIGR--QMVAVYLQDVNDNGP 1870 HSP 3 Score: 106.686 bits (265), Expect = 5.986e-23 Identity = 183/755 (24.24%), Postives = 325/755 (43.05%), Query Frame = 1
Query: 430 DGLSLKGIIRVEINVQDVNDNVPTFLTSSI-LKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWN-SPADNQKTKLS-ITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVD----EDEDSE--ITYR----SADFSSQYFSVS-SKGQIFLKRPLDFETTSL---HLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNP--LTSTMTISLTIADINDNTPIF-EKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK-SLFVIDSDSGWVTATLKLD----REKESFYQLIIVAKDKGTM----PKQQTSSCXXXXXXXXXXXXSPKFIGPKK-------LEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN---GSLQSAKE--FDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISL--------PNDPDIFSI----DPQIGILR-VKRKLKKELIGDYNVQIIVEDNGKPSKMHSQ-KILVRIQDILRLEERSKRQKSEHWTKS 2523
+GL + I+V D+ D P+F+ S + + +V + +G+ + A D + N V YK I + +F++ D +V YER Y ++ A + SP+DN ++LS + I + ++ P+F +Q+YEV+V E+ ++ ++ V+A ED S+ ITY + + +++F + S G I L R LDF+ +L H + V A ++ ++ + I + DVND P F ++ E P N I ++T D+D+ N +++ +D+ F ++ +VR D ++ + P L+S+ I + + ND + +F + Y+ + E+ VI++ A D D VTY + + +K +LF ID +G V + E E+ L ++ +D G+ K TS T+ I I DVN+N P+F K +E P T V + ATD+D NG +++ L +E+ I+ G L + FDRET R + ++ D+G PL + ++D+NDN P+ P Y +S +E+ G ++ A D D NA + + + ND D F + +I +++ + K +K + +I +DNG P + S ++ + + D K+QK+ W S
Sbjct: 399 NGLQSTRTQTIRIHVADI-DEPPSFVNSPLPMLAVVPLNPTIGRIVYQFVARDEHGDGDSN-VLYKTIDVIPAGSFIV----DPKSGVVRTGWSKYERGDTYRISAQAMDLSPSDNTTSQLSEVAILEILADERPPQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRSFEDGRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDT-GDNSRITY----------------SVDNHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDE---VTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVE-ATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYE-----------------TSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQK-----FIFNVIADDNGIPEALQSSAQVTLNVLD--------KQQKAPKWQTS 1096 HSP 4 Score: 98.2117 bits (243), Expect = 2.776e-20 Identity = 93/339 (27.43%), Postives = 166/339 (48.97%), Query Frame = 1
Query: 265 SEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWD-GLSLKGIIRVEINVQDVNDNVPTFLTS--SILKSVKEVIYGVGKS-MELQKAIDRDVSKEHNTVTYKLDAD-IYSDTFMLKVTNDSFPILVLKKALDYERC--KLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSE---ITYRSADFSSQYFSV--------SSKGQIFLKRPLDFETTS----LHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDS 1215
S +I YR + Q + D I K I+L + P G ++V + D G L G V++NV+D+NDN P F ++ +E I+ G M++Q D + E+ + Y + + + + + ++ ++ I ++ +LD E + + + + A + +++ ++TI+V ++ND P F++ +YE SVEE PI + ++ A D DE+++ TY+ ++ S YF V SS G + +K+PLD+E + HL ++ SD +A V + +VD ND AP + + R+ E P IG+ T DRD+
Sbjct: 1470 SSRIVYRLEGQGA----DEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMR-SLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSE-ESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHL-GIRVSDGRHDAEAAVHVALVDRNDHAPHIH-GATEHRVREDVPRGTSIGRYTATDRDA 1800 HSP 5 Score: 95.9005 bits (237), Expect = 1.306e-19 Identity = 151/623 (24.24%), Postives = 260/623 (41.73%), Query Frame = 1
Query: 688 LVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSM--------IIQVEAVDEDEDS---EITYR----SADFSSQYFSVSS-KGQIFLKRPLDFETTSLHLIDVQASDNEFNA----------NTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSE---------AANGKLSCWEPRNLYNKQAVIF-KPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVS-IEENNPVDAKVIKVTATDKDIG-RNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESF---YQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKL--EIFENEKPGTEVGILI----ATDNDE--GDNGKLLFKLLPN---HNENFFYLTIN-GSLQSAKEFDRETTD--RYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLD-EGENAAFHFRISLPND-----PDIFSIDPQIGILRVKRKLKKE 2373
+V+ + LDYE+ Y L + A + + TK + + V ++ND+ P+F + +++E + N I+ V+A+D D D E+ YR + +++F + G+IF D E ++++ V+ASD +A N KV I + DVND AP F R++E + E + I D D A G++ P + IF K PLD + D Y V A+ +T + + I D+NDN P FE+ Y+ + IEE+ + + V ATD D ++ + Y ++ + +F I SG + LDR+ + + ++ A D + + + D+NDNSP F P++L I EN +P G+ A D D+ +N + + ++ N + E+ F + N G + + + DRE + + +++ ND+G V I + D+NDN P + T + S + I G ++ A D D E ++ F +++S +D D S +G+LRVK+ L E
Sbjct: 1164 VVIMEGLDYEQVNNYTLTLTATDMTSRVASTK-TFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRI----PFGVRTDSGTIFVKEPLD----FEASDQYHLVLI-------------------ASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGA----DEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDG--NGLVGYADVQVNVRDINDNSPIF--PERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFF-------EKTRYEGSVEETAPI----------GAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYE 1733 HSP 6 Score: 84.3445 bits (207), Expect = 4.209e-16 Identity = 119/478 (24.90%), Postives = 196/478 (41.00%), Query Frame = 1
Query: 403 QLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYE---RCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINS---MIIQVEAVDED----EDSEITY-----RSADFSSQYFSVSSKGQIFLKRPLDFETTSLH--LIDVQASDNEFNAN---TKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLS---CWEPRNLY------NKQAVI----FKPPLDSK--TFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKD 1731
Q +LV+ DG V I+++DVNDN P F +V E + K + A D D ++ + + Y+L+ + F + + + ++ KALD + +N + A + + + + V +IND P F ++ + E PI+S + V+A D D E++ I Y + + S + + G+IF R LD E +S +I+V+A+D + V I V D+ND AP F +EE P + + +D D EA + + E Y +KQ+ + K PLD + T + L RV R + + + + + D ND+ P A + E+ P + + TATD+D G + I+ R +P++ F ID D G + LDRE + Y LII A D
Sbjct: 1404 QYHLVLIASDGRH-NATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELV---KALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHD----------------------AEAAVHVALVDRNDHAPHIHGATEH-RVREDVPRGTSIGRYTATDRDAGDT--ARFRIN--RQSDPKRQ-FTIDQD-GTLRVAHTLDREDIAVYNLIIEAYD 1848 HSP 7 Score: 75.0998 bits (183), Expect = 3.201e-13 Identity = 180/778 (23.14%), Postives = 311/778 (39.97%), Query Frame = 1
Query: 289 QKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWA--WNSPADNQKTKLSITIRVVNINDMEPKF-KQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ------YFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDNEFNANTKV--------------------VITVVDVNDEAPQFNLNPSF---CRIEEG----QPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKP-PLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTY--EIDNLRSMNPEKSL---FVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVG--------ILIATDNDEGD--NGKLLFKLL----PNHNENFFYLTINGSLQSAKEF---------DRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLD-EGENAAFHFRI---SLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVED 2412
+ + +F +D +T I+ L+D ++ + +L+ + + + + + I + DVNDNVPTF V+E I + +++ A+D+D + +++ +TY +D + F + + + L ER +Y + A P + + I IR N ND F +Y V E+ + +IQ++A D D D E+TY D + + FS+ G + L+ + D+ ++N N V +I + DVN+ P+F + +I EG P I+ ++ D DS +ANG + +LY Q+ K +D +T G V FDRE T + D G PL S+ + DINDN+P FE+ Y S+ V VI V A D D N +TY EID + L +++ SG +T + + + F ++A D G +P+ SS + + ++D +PK+ + + KPG V IL GD N +++KL P + + N ++ E+ D E + Y L + D + ++ T T + + DVND P+ + T+ +E +T + + ++ G I+ +A D D +G H+RI + + F ID G + K +E I Y + + D
Sbjct: 579 EDETKWFRIDPSTGIIHLTRLLDFDDPA--------LPKLHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDI-PLNQTILKVTAVDKD-TGDNSRITYSVD----NHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAM-IHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRD-EVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRH-------GVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIV--KVEATDDDS-SANGDIV----YSLYYTQSESRKAFVIDRQT--GVLTPSPHVVFDRE-TRPREDVTVKATDRG--DRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFI-FNVIADDNG-IPEALQSSAQVTLNVLDKQQKAPKW------QTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFN-KFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDM-TSRVASTKTFVVEVRDVNDVVPQFTVDLF--------TGTIDEE-MTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASD 1302
BLAST of Protocadherin gamma vs. Ensembl Celegans
Match: hmr-1 (Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]) HSP 1 Score: 136.346 bits (342), Expect = 5.063e-32 Identity = 192/711 (27.00%), Postives = 308/711 (43.32%), Query Frame = 1
Query: 466 INVQDVNDNVPTFLTSSILKSVKEVIY-------GVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDT---FML-KVTNDSFPILVLKKALDYERCKLYNLAIWAWNS-----PADNQKTKLSITIRVV--NINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR--SADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVI---KVTATDKD--IGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLII--VAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-GTEVGILIATDNDE--GDNGKLLFKLLPNHNENFFYLTIN--------GSLQSAKEFDRETT---DRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDI-FSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ V+DVND VP F ++ E + GK + KAID D N V Y++ + + F + ++T + FP + D E+ +Y L + A + P N K ++ +++V ++ND P F++QKY V+E+ +I ++A D D+ S + Y A F V + G IF+K PLDFE + + + + ASD NA T V I + DVND APQF + E E++ I ++ ++A + S R +Y + + G +L + DR+ +V N L + + + DINDN+PIF + ++ E P+ + + V A D D N + Y I + +N E S+F ID ++G + A LDRE S + II A D+G ++ ++ I + D+NDN+P F + E P G V A D DE DN +F + ++FY+T + G L+ + D E D + L I ++D + H + ++D ND+ P + H +E + G I + A+D D G+ A FRI+ +DP F+ID Q G LRV L +E I YN+ I DN + + Q + V +QD+
Sbjct: 1199 VEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFP----NEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRIPFGVRTDSGTIFVKEPLDFEASDQYHLVLIASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIE---EDVDIPKVLFNVHATDADQDEKSS---RIVYRLEGQGADEVFRIGKYSGTIELVKAL--DRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGE-SVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANV--TIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDN---VFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVH---VALVDRNDHAPHIHGATEHRV----------REDV--------PRGTSIGRYTATDRDAGDTA--RFRINRQSDPKRQFTID-QDGTLRVAHTLDREDIAVYNLIIEAYDNS--NNIGRQMVAVYLQDV 1865 HSP 2 Score: 122.479 bits (306), Expect = 1.081e-27 Identity = 153/581 (26.33%), Postives = 251/581 (43.20%), Query Frame = 1
Query: 454 IRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSV-EENLPINSMIIQVEAVDEDED---SEITYR-SADFSSQYFSVSS-KGQIFLKRPLDFE----TTSLHLIDVQASDNEFNA---NTKVVITVVDVNDEAPQFNLNPS--FCRIEEGQ----PENIIIGQITIWDRDSEAA-NGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKD-IGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMP-----KQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPP 2118
++V+I + DVNDN P+F + VKE G G + KA D D +H+ + Y L V DS I V K+ LD+E Y+L + A + ++ I + ++ND P+F+QQKY +V EE++ I ++ V A D D+D S I YR + + F + G I L + LD + S + + VQA D++ N V + V D+ND +P F P F IEE + + + + D D N + RN +F+ ++ + L + +RE + D G + +TI +T D+NDN P FEK Y S+EE P+ A V+ +A D D ++ + TY+ ++ E F + +D +++ + R K+ + +D + + + +++ ++D ND++P G + + E+ GT +G ATD D GD + + F + +G+L+ A DRE Y L IE D V + + DVNDN P
Sbjct: 1319 VKVQIVINDVNDNAPSFEEQKYIGRVKES-EGEGHDVITIKAHDLD---KHSNLRYHL-IGAGGGRIPFGVRTDSGTIFV-KEPLDFEASDQYHLVLIASDG---RHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELVKALDRDPPAGVPSWNFV-VQAIDDDGNGLVGYADVQVNVRDINDNSPIF---PERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSERE-----FIIEVRANDRGVPSREGFANVTIKVT--DMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQ------LSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHDAEAAVHVALVDRNDHAPHIHGATEHRVREDVPRGTSIGRYTATDRDAGDTARFRINRQSDPKRQ-FTIDQDGTLRVAHTLDREDIAVYNLIIEAYDNSNNIGR--QMVAVYLQDVNDNGP 1870 HSP 3 Score: 106.686 bits (265), Expect = 5.986e-23 Identity = 183/755 (24.24%), Postives = 325/755 (43.05%), Query Frame = 1
Query: 430 DGLSLKGIIRVEINVQDVNDNVPTFLTSSI-LKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWN-SPADNQKTKLS-ITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVD----EDEDSE--ITYR----SADFSSQYFSVS-SKGQIFLKRPLDFETTSL---HLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNP--LTSTMTISLTIADINDNTPIF-EKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK-SLFVIDSDSGWVTATLKLD----REKESFYQLIIVAKDKGTM----PKQQTSSCXXXXXXXXXXXXSPKFIGPKK-------LEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN---GSLQSAKE--FDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISL--------PNDPDIFSI----DPQIGILR-VKRKLKKELIGDYNVQIIVEDNGKPSKMHSQ-KILVRIQDILRLEERSKRQKSEHWTKS 2523
+GL + I+V D+ D P+F+ S + + +V + +G+ + A D + N V YK I + +F++ D +V YER Y ++ A + SP+DN ++LS + I + ++ P+F +Q+YEV+V E+ ++ ++ V+A ED S+ ITY + + +++F + S G I L R LDF+ +L H + V A ++ ++ + I + DVND P F ++ E P N I ++T D+D+ N +++ +D+ F ++ +VR D ++ + P L+S+ I + + ND + +F + Y+ + E+ VI++ A D D VTY + + +K +LF ID +G V + E E+ L ++ +D G+ K TS T+ I I DVN+N P+F K +E P T V + ATD+D NG +++ L +E+ I+ G L + FDRET R + ++ D+G PL + ++D+NDN P+ P Y +S +E+ G ++ A D D NA + + + ND D F + +I +++ + K +K + +I +DNG P + S ++ + + D K+QK+ W S
Sbjct: 399 NGLQSTRTQTIRIHVADI-DEPPSFVNSPLPMLAVVPLNPTIGRIVYQFVARDEHGDGDSN-VLYKTIDVIPAGSFIV----DPKSGVVRTGWSKYERGDTYRISAQAMDLSPSDNTTSQLSEVAILEILADERPPQFAKQEYEVTVSEDNLVDYSVVDVKAQSFRSFEDGRSKGPITYSLEGDTPEDETKWFRIDPSTGIIHLTRLLDFDDPALPKLHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDIPLNQTILKVTAVDKDT-GDNSRITY----------------SVDNHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAMIHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRDE---VTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRHGVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIVKVE-ATDDDSSANGDIVYSLYYTQSESRKAFVIDRQTGVLTPSPHVVFDRETRPREDVTVKATDRGDRPLIGFCQFSVEVVDINDNSPQFERPSYE-----------------TSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQK-----FIFNVIADDNGIPEALQSSAQVTLNVLD--------KQQKAPKWQTS 1096 HSP 4 Score: 98.2117 bits (243), Expect = 2.776e-20 Identity = 93/339 (27.43%), Postives = 166/339 (48.97%), Query Frame = 1
Query: 265 SEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWD-GLSLKGIIRVEINVQDVNDNVPTFLTS--SILKSVKEVIYGVGKS-MELQKAIDRDVSKEHNTVTYKLDAD-IYSDTFMLKVTNDSFPILVLKKALDYERC--KLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSE---ITYRSADFSSQYFSV--------SSKGQIFLKRPLDFETTS----LHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDS 1215
S +I YR + Q + D I K I+L + P G ++V + D G L G V++NV+D+NDN P F ++ +E I+ G M++Q D + E+ + Y + + + + + ++ ++ I ++ +LD E + + + + A + +++ ++TI+V ++ND P F++ +YE SVEE PI + ++ A D DE+++ TY+ ++ S YF V SS G + +K+PLD+E + HL ++ SD +A V + +VD ND AP + + R+ E P IG+ T DRD+
Sbjct: 1470 SSRIVYRLEGQGA----DEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMR-SLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSE-ESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHL-GIRVSDGRHDAEAAVHVALVDRNDHAPHIH-GATEHRVREDVPRGTSIGRYTATDRDA 1800 HSP 5 Score: 95.9005 bits (237), Expect = 1.306e-19 Identity = 151/623 (24.24%), Postives = 260/623 (41.73%), Query Frame = 1
Query: 688 LVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSM--------IIQVEAVDEDEDS---EITYR----SADFSSQYFSVSS-KGQIFLKRPLDFETTSLHLIDVQASDNEFNA----------NTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSE---------AANGKLSCWEPRNLYNKQAVIF-KPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVS-IEENNPVDAKVIKVTATDKDIG-RNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESF---YQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKL--EIFENEKPGTEVGILI----ATDNDE--GDNGKLLFKLLPN---HNENFFYLTIN-GSLQSAKEFDRETTD--RYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLD-EGENAAFHFRISLPND-----PDIFSIDPQIGILRVKRKLKKE 2373
+V+ + LDYE+ Y L + A + + TK + + V ++ND+ P+F + +++E + N I+ V+A+D D D E+ YR + +++F + G+IF D E ++++ V+ASD +A N KV I + DVND AP F R++E + E + I D D A G++ P + IF K PLD + D Y V A+ +T + + I D+NDN P FE+ Y+ + IEE+ + + V ATD D ++ + Y ++ + +F I SG + LDR+ + + ++ A D + + + D+NDNSP F P++L I EN +P G+ A D D+ +N + + ++ N + E+ F + N G + + + DRE + + +++ ND+G V I + D+NDN P + T + S + I G ++ A D D E ++ F +++S +D D S +G+LRVK+ L E
Sbjct: 1164 VVIMEGLDYEQVNNYTLTLTATDMTSRVASTK-TFVVEVRDVNDVVPQFTVDLFTGTIDEEMTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASDRSVSALPGANGPNKDNVKVQIVINDVNDNAPSFEEQKYIGRVKESEGEGHDVITIKAHDLDKHSNLRYHLIGAGGGRI----PFGVRTDSGTIFVKEPLD----FEASDQYHLVLI-------------------ASDGRHNATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGA----DEVFRIGKYSGTIELVKALDRDPPAGVPSWNFVVQAIDDDG--NGLVGYADVQVNVRDINDNSPIF--PERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFF-------EKTRYEGSVEETAPI----------GAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYE 1733 HSP 6 Score: 84.3445 bits (207), Expect = 4.209e-16 Identity = 119/478 (24.90%), Postives = 196/478 (41.00%), Query Frame = 1
Query: 403 QLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYE---RCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINS---MIIQVEAVDED----EDSEITY-----RSADFSSQYFSVSSKGQIFLKRPLDFETTSLH--LIDVQASDNEFNAN---TKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLS---CWEPRNLY------NKQAVI----FKPPLDSK--TFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKD 1731
Q +LV+ DG V I+++DVNDN P F +V E + K + A D D ++ + + Y+L+ + F + + + ++ KALD + +N + A + + + + V +IND P F ++ + E PI+S + V+A D D E++ I Y + + S + + G+IF R LD E +S +I+V+A+D + V I V D+ND AP F +EE P + + +D D EA + + E Y +KQ+ + K PLD + T + L RV R + + + + + D ND+ P A + E+ P + + TATD+D G + I+ R +P++ F ID D G + LDRE + Y LII A D
Sbjct: 1404 QYHLVLIASDGRH-NATTNVYIHIEDVNDNAPQFEQQKYATTVIEEDVDIPKVLFNVHATDADQDEKSSRIVYRLEGQGADEVFRIGKYSGTIELV---KALDRDPPAGVPSWNFVVQAIDDDGNGLVGYADVQVNVRDINDNSPIFPERLFGYIEENREPIHSDGVYFMDVQARDFDDPTTENANIEYGIVRNKLINGESVFRIDQNTGKIFAMRSLDREISSEREFIIEVRANDRGVPSREGFANVTIKVTDMNDNAPFFEKTRYEGSVEETAPIGAAVMSFSAFDADEEAKDNVFTYQLSEESDYFYVTTDKDSKQSSVGVLRVKQPLDYEDVTQRDGFHLGIRVSDGRHD----------------------AEAAVHVALVDRNDHAPHIHGATEH-RVREDVPRGTSIGRYTATDRDAGDT--ARFRIN--RQSDPKRQ-FTIDQD-GTLRVAHTLDREDIAVYNLIIEAYD 1848 HSP 7 Score: 75.0998 bits (183), Expect = 3.201e-13 Identity = 180/778 (23.14%), Postives = 311/778 (39.97%), Query Frame = 1
Query: 289 QKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWA--WNSPADNQKTKLSITIRVVNINDMEPKF-KQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ------YFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDNEFNANTKV--------------------VITVVDVNDEAPQFNLNPSF---CRIEEG----QPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKP-PLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTY--EIDNLRSMNPEKSL---FVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVG--------ILIATDNDEGD--NGKLLFKLL----PNHNENFFYLTINGSLQSAKEF---------DRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLD-EGENAAFHFRI---SLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVED 2412
+ + +F +D +T I+ L+D ++ + +L+ + + + + + I + DVNDNVPTF V+E I + +++ A+D+D + +++ +TY +D + F + + + L ER +Y + A P + + I IR N ND F +Y V E+ + +IQ++A D D D E+TY D + + FS+ G + L+ + D+ ++N N V +I + DVN+ P+F + +I EG P I+ ++ D DS +ANG + +LY Q+ K +D +T G V FDRE T + D G PL S+ + DINDN+P FE+ Y S+ V VI V A D D N +TY EID + L +++ SG +T + + + F ++A D G +P+ SS + + ++D +PK+ + + KPG V IL GD N +++KL P + + N ++ E+ D E + Y L + D + ++ T T + + DVND P+ + T+ +E +T + + ++ G I+ +A D D +G H+RI + + F ID G + K +E I Y + + D
Sbjct: 579 EDETKWFRIDPSTGIIHLTRLLDFDDPA--------LPKLHKLKVTAREDNRESHVDLTIRIDDVNDNVPTFTRPLYTAQVREDI-PLNQTILKVTAVDKD-TGDNSRITYSVD----NHNFSINSNGEISAKVRLDADQLNERHFVYRFNVTARDHGEPVSLSSSAM-IHIRTENTNDESAVFLPTSQYTAFVAEDAQGGTPVIQIQARDADRD-EVTYSFMDKNGRSTQKMNLFSIDEHTGLVKLRH-------GVSAADLAEAENPINLTVIVQDDGSCCVYPSKTHTSYATLLIGIEDVNNNKPEFPDCAKYSDIAKIMEGTYKTDPPTIV--KVEATDDDS-SANGDIV----YSLYYTQSESRKAFVIDRQT--GVLTPSPHVVFDRE-TRPREDVTVKATDRG--DRPLIGFCQFSVEVVDINDNSPQFERPSYETSVSRFEAVGTSVITVFAFDNDAAHNAEITYSLEIDTTAGEEHQNDLDFFELVNRRSGEITLIKPIPMKTQKFI-FNVIADDNG-IPEALQSSAQVTLNVLDKQQKAPKW------QTSPDCKPGITVDENVELNKVILRCRAVSSGDSRNSDVIYKLTASGGPGNKAESKFRQFN-KFENGNEWVEVVIMEGLDYEQVNNYTLTLTATDM-TSRVASTKTFVVEVRDVNDVVPQFTVDLF--------TGTIDEE-MTPNEHLEKTNGKPIVTVKAIDTDSDGPQNEVHYRIVGEANGEETKHFRIDELTGEIFPNEKFDREKIDMYILTVEASD 1302
BLAST of Protocadherin gamma vs. Ensembl Celegans
Match: cdh-1 (CaDHerin family [Source:UniProtKB/TrEMBL;Acc:Q5F4W0]) HSP 1 Score: 129.413 bits (324), Expect = 7.746e-30 Identity = 163/603 (27.03%), Postives = 274/603 (45.44%), Query Frame = 1
Query: 688 LVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS--EITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLI----DVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDS-KTFYGKY---DLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESP-GFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRI 2460
+ ++K D+E+ K Y + A N A+++ + I+IR+ ++ND P F +Y ++V E ++ V A D D + E++Y SS + G++F ++PL HL+ D +E +AN + ITV+D + + PQF+ + R E I IG + + K S + +N F D+ K + +Y D++ V + + T+ + ++ + + I D NDN P F ++ +SI E+ + V A+DKD +NG V Y I S +P S+ ID +G ++ LD E Y+L + A D G P+ +S+ T+ I ++DVNDN+P+F +E+ EN P T VG ++A D D +NG++++++ N +E F G++ + + DRE + I D+G P S T + I++LDVNDNPP + SIT + SP I A D D+G N + +R L + +F + G + ++R+L + +IV D G P K + VRI
Sbjct: 595 VCIQKTFDFEKQKSYQTTVIATN--ANSETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILSESSSFSINPVTGEVFAQKPL--ARGRFHLVVSAKDGGGQSSENSAN--IHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSV------GAMSKVKYSIYSGDQDHN-----FSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSGE---------------SNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSI---ISSHPGSSI-EIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPR--SSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRIT-NGSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCL-------------------SITPIVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYRAQLQS--SLFVVKSN-GDVYLRRQLNASDERHQRLSVIVSDQGVPRKSVVCHVPVRI 1136 HSP 2 Score: 122.479 bits (306), Expect = 8.716e-28 Identity = 166/645 (25.74%), Postives = 280/645 (43.41%), Query Frame = 1
Query: 214 KISEDVPLST---QMILRNL----SEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSME----LQKAIDRDVSKEHNTVTYKLDADIYSDTFMLK-VTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR--SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNAN-TKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDS---KTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINI 2094
+I ED P+ T +++ N S++I Y Q Q + +D+ + + + D E+ V + S + I ++DVNDN P F + +V+E G E + A D D S V+Y + ++ S +F + VT + F +K L R ++L + A + + + +I I V++ + P+F + KYE+ E++ I V A+ S++ Y S D + G+I++ R LD + L+++QA+ +N T+VVI + D ND PQF+ + I E + + D+D + NG++ + ++I P S F G+ L T D E T + +V P +S MT+ + + D+NDN P FEK+ Y++ + EN+P V KV A DKD NG + Y I N F ID G V +DRE S + IVA+DKG P+ T+S I++ ++ N S I P + + T +G ++A D D+G NG +L++ + F + NG + ++ + L + ++DQG S+ V + I
Sbjct: 548 EIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEK----------QKSYQTTVIATNANSETSTSLISIRLKDVNDNWPIFYPNEYHLTVRE-----GPKPEEPLLVVSASDMD-SGTFGEVSYHILSE--SSSFSINPVTGEVFA----QKPLARGR---FHLVVSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGAM-----SKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSGESNQTQVVIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKK-KNGEV----------RYSIISSHPGSSIEIDQFTGQ--LSTGSLLDYEATRNYKLRVKATDL---GIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLENSPPKTIVGKVVARDKDSLENGQIVYRITN------GSEYFGIDEKLGNVYTKRSIDREVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSCLSITP--IVVPAGSPLSTAIGTIVAMDPDKGLNGSVLYR--AQLQSSLFVVKSNGDVYLRRQLNASDERHQRLSVIVSDQGVPRKSVVCHVPVRI 1136 HSP 3 Score: 102.449 bits (254), Expect = 1.328e-21 Identity = 168/691 (24.31%), Postives = 285/691 (41.24%), Query Frame = 1
Query: 454 IRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSK--EHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY---RSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNL----NPSFCRIEEGQPENIIIGQITIWD--RDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRY-CLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFE--ILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
I + + V D NDN P+F + + E +G S L D D K H V + + + KV LV+ LD E Y L I A + + +L +I +++ ND P F + +Y SV N+ I S +I V+A D D E+S I+Y +++ S+ F++S G I L S H + V ASD+ +++ V ITV+ +P ++ + + E I+ +++I RD++ S P+ QA + Y L DR ET + ++ DG +TI DINDN P + + +S+ N +TA D D+G+NG + Y + + L ID ++G + +D S + + A+D G+ ++ + ++D P+F ++EI E+ GT + + + +N + N K + L N +E+ T++G++ K FD E Y I N +T S+ + I + DVNDN P +YH L++ E P E +L ASD+D G + I ++ FSI+P G + ++ L + G +++ + +D G S +S I + + D
Sbjct: 106 IDILVEVDDENDNAPSFADQVVKLEISEFAQ-LGTSFALPTVTDGDGPKFDVHRFVILQGNVNNVFKLASRKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASL--LPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQYRDTKLRLIGSSALCPQQ--TDQAHV-------------YLLLLCGILDR-ETASEHHLKFLLEKDGQIIIEHPQLLTI----GDINDNAPQWHSSQIHISL---NRTQGGSRTLTAKDPDLGQNGWIRYSV-------LDTELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGS--PALSTDLQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCL-VKVVANNSQCGNSKRIRYSLQNQDEHLTVDTMSGTVCIQKTFDFEKQKSYQTTVIATNANSETSTSL---ISIRLKDVNDNWPIFYPNEYH-------------------LTVREGPKPEEPLLVVSASDMDSGTFGEVSYHIL--SESSSFSINPVTGEVFAQKPLAR---GRFHLVVSAKDGGGQSSENSANIHITVID 733 HSP 4 Score: 98.2117 bits (243), Expect = 2.228e-20 Identity = 170/757 (22.46%), Postives = 302/757 (39.89%), Query Frame = 1
Query: 244 QMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSS-----ILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEP-KFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFS-SQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQ--ITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPP--LDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAK-VIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKEL--IGDYNVQIIVE--DNGKPSKMHSQKILVRIQ 2463
+++ ++E+ +RFQ F ++S T + L E +H L++ + DG S V + V D NDN P S+ I +S + VG + +A D D+ ++ +++L D ++ T D LVL++ + K+ L + P + L I+ R P +F +Q Y +++E LP I +++ E + +TY + + FSV S+G I LD E + + V + + T+V + V ++ND P F ++ R+ PEN+ +G T+ +D + P + + P + F G L + F+ A + +++ ++DINDN P F K +Y ++ + K+ A D D G +TY + S S+F + +SG + +K+ Y + + A D G +P TS I + P F + + E+ EN K G ++G L ++ E +++ F + G L A DRE + Q+EI+++ T + + +LD NDN P Y Y + +S G +I + ASD D GEN +RI ND +I +++P G +++ +L + QI+VE D+G P++ K+ V ++
Sbjct: 1652 RILATGMTEESRFRFQGNAPKFSINSTTGSISVLPLD--REASQEHL---------LIIILTDGGSRNDSCTVRVTVADQNDNKPQLDASTPSELEIAESSR-----VGDVLHRFRASDMDIG-QNGKFSFELLEDSSGSLDLVPETGD----LVLRRLSSLQSWKI-KLRVVDHGVPGLYVEKNLEISNRNPQTEAKAPLEFLKQTYLSTIDEGLPRGQFIAKLQP----ELAGLTYSIVEGNIDSAFSVDSEGVIRTNLELDREILERYSLKVIGTGSGQQIGTRVDVRVNNLNDNVPSFPMSKPR-RV----PENLRVGSYVATVGAKD-------VDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTAPLDFE--------VLPEHTLTIKATDGSFDTFTNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDA--RGALTYSLGQGSS-----SIFRVAPESGAL--FMKVLPPAGERYLVTVTATDNG-VPSFSTSVPVSVIIGEAEPTDKPGFEKAEFRFEVMENSKIGLQIGNLSGEESRE-----FHYRIQDPEASKIFSIDKFGRLFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAY---YLSLKDSMAH--------------GQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLK 2330 HSP 5 Score: 93.9745 bits (232), Expect = 5.325e-19 Identity = 164/696 (23.56%), Postives = 281/696 (40.37%), Query Frame = 1
Query: 457 RVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRD---------VSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVE-ENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSK-GQIFLK-RPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEG--QPENIIIG-QITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTF----YGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEI-----DNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNV---QIIVEDNGKPSKMHSQKILVRI 2460
RV++ V ++NDNVP+F S + V E + VG + A D D VS + D ++ T L LD+E + L I A + D T ++TI V +IND P F + Y+ +V ++EA D D +TY SS F V+ + G +F+K P E +L+ V A+DN + + V V + + P P F + E EN IG QI G LS E R + + + P SK F +G+ L+ DRE+ +V I + ++ I L D NDN P+F Y +S++++ K+ ++ A+D+D G NG V+Y I N+ ++NP+ ++ W A +LD + +Q+++ A+D G + +++ + + ++P F+ P ++ + E+ GT + + A++ N LL+ L H G L D E+ + + ++D + + + +D ++ P +T K S T+ + I G + + +A D D G + + IS + I+ GI+R L+K L+ N+ QI V P+K + + I
Sbjct: 1912 RVDVRVNNLNDNVPSFPMSK-PRRVPENLR-VGSYVATVGAKDVDNLAPLRYFLVSDSSGQTPTHFNIDQFTGTIHLTA------------PLDFEVLPEHTLTIKATDGSFD---TFTNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPPAGER---YLVTVTATDNGVPSFSTSVPVSVIIGEAEP--TDKPGFEKAEFRFEVMENSKIGLQI-----------GNLSGEESREFHYR----IQDPEASKIFSIDKFGR--LFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVL---DENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNE---WNDA--QLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLYS-LKEHQGKLGIDVKTGELTLKTHLDWESEPIISMYLSVSDGNGRSAVVPLKIVVEPVD-----------EFAPVFT--------KSSYTLQIPISTPAGESVGQMQAIDEDGGVHGVVKYSIS--DRQSTVKIEEHTGIIR----LQKPLVSRRNLTIEQITVVAYSSPTKQSKTTVYLEI 2534 HSP 6 Score: 83.9593 bits (206), Expect = 6.166e-16 Identity = 89/369 (24.12%), Postives = 154/369 (41.73%), Query Frame = 1
Query: 1432 MTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPK----FIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLF--KLLPNHNE--NFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDILRLEERSKRQKSEHW 2514
+ S+ I D NDN P+F ++ Y+ S+ N + + +I V ATD DIG N ++Y+I ++ P S F I S SG +T T L S + +I+VA D G+ P +S+ + + P + + EN G+ V + +L+ L P + + + L + G L DRET + L+ + G+ + I H + I D+NDN P+ +H I + Q S T+ A D D G+N + + D ++ SID + G + V + + + ++ ED G P+ ++ + D+L E + + + W
Sbjct: 217 LRCSIEIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIK--KTSAPSNSNFAI-SQSGVITTTASL--LPASTHDVIVVASDHGS-PSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSAHLMENSTLGSIVARVSIAQQYRDTKLRLIGSSALCPQQTDQAHVYLLLLCGIL------DRETASEHHLKFLLEKDGQ--IIIEHPQLLTIGDINDNAPQ-----WHSSQIHISLNRTQGGSRTL---------------TAKDPDLGQNGWIRYSVL---DTELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQV---VADLLDTESKPPQFEKALW 545 HSP 7 Score: 81.6481 bits (200), Expect = 2.639e-15 Identity = 132/551 (23.96%), Postives = 229/551 (41.56%), Query Frame = 1
Query: 301 SYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNS--PADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSAD-FSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVV----ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKL 1929
++F +D T + +D E L P+H L + DG S + I V D+NDN PTF +V + G+ +A D D +TY L S F + + + + VL A ER Y + + A ++ P+ + +S+ I D +P F++ ++ V EN I +Q+ + +E E YR D +S+ FS+ G++F+ P+D E + H V+ DNE + KV + V+D ND P F + +++ IGQI D+DS NG++S R L I L+ T + + + + D E + ++ D G + +SL ++ + + P F VY V + E+ V + K+ A+++ RN + Y S+ + ID +G +T LD E E + + D +++ + I + V++ +P F L+I + G VG + A D D G +G + + +
Sbjct: 1973 THFNIDQFTGTIHLTAPLDFEVL-PEHT---------LTIKATDG-SFDTFTNLTIFVSDINDNAPTFSKPLYQTTVSPATFSPGQPFAKIEAHDLDA---RGALTYSLGQG-SSSIFRVAPESGALFMKVLPPA--GER---YLVTVTATDNGVPSFSTSVPVSVIIGEAEPTD-KPGFEKAEFRFEVMENSKIG---LQIGNLSGEESREFHYRIQDPEASKIFSIDKFGRLFVAGPIDREQRATHEFQVEI-DNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYLSLKDSMAHGQKIGQIMASDQDS-GENGRVSY---RILSGNDLNIVT--LNPDTGSIQLNEWNDAQLD-EFPNATWQILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVLEDTSVGTVLQKIRASNRLGMRNDGLLY------SLKEHQGKLGIDVKTGELTLKTHLDWESEPIISMYLSVSDG----NGRSAVVPLKIVVEPVDEFAPVFTKSSYTLQIPISTPAGESVGQMQAIDEDGGVHGVVKYSI 2481 HSP 8 Score: 79.337 bits (194), Expect = 1.384e-14 Identity = 133/568 (23.42%), Postives = 240/568 (42.25%), Query Frame = 1
Query: 796 IRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQ--ITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLP-NHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITH--TVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ + +IND P++ + +S+ S + + D ++ I Y D ++ S+ + G+IF+ +D S V+A D + + +VV ++D + PQF + ++E PE+ IG + + +S+ N K + +N V T G + F+++++ N TST IS+ + D+NDN PIF Y +++ E + ++ V+A+D D G G V+Y I + E S F I+ +G V A L R + + L++ AKD G + +S I+IT+ID + +P+F K ++ E+ PG +G + G K+ + + + + NF G + + D + D L I Q P ++ V I I D NDNPP+ +S++ + SI DL ++E P + + +ASD D+ +N + I + ID G L L E +Y +++ D G P + + + + + D+
Sbjct: 429 LTIGDINDNAPQWHSSQIHISLNRTQG-GSRTLTAKDPDLGQNGWIRYSVLD--TELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTDLQVVADLLDTESKPPQFE--KALWQVE--IPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLTV--------DTMSGTVCIQKTFDFEKQKSYQTTVI-------ATNANSETSTSLISIRLKDVNDNWPIFYPNEYHLTVREGPKPEEPLLVVSASDMDSGTFGEVSYHILS------ESSSFSINPVTGEVFAQKPLARGR---FHLVVSAKDGGGQSSE--NSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSV-------GAMSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHDTVLLNI----QATLPSGESNQTQVVIFIEDHNDNPPQF-------------SSSLVEISIREDLKLHE-PFYVV---QASDKDKKKNGEVRYSIISSHPGSSIEIDQFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDV 935
BLAST of Protocadherin gamma vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0078045) HSP 1 Score: 204.142 bits (518), Expect = 6.576e-53 Identity = 198/707 (28.01%), Postives = 335/707 (47.38%), Query Frame = 1
Query: 433 GLSLKGIIRVEINVQDVNDNVPTFLTS----SILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCK-LYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ---YFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNE--FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQ----ITIWDRDSEAANGKLSCWEPRNLYNKQA-VIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSL--------FVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPD---IFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
GLS +I++++ DVNDN P F S+ +S K + A D D V+Y++ A ++ + ++ + I V++ + R + ++ L I A + + + +++ P F++ +Y V+E++P +++ V A D R + +S YFS+ ++ G I + +PLD E S L+++QA+ E +T+V I V DVND AP+F S RI PE+ +G D+DS ++G+++ +L + +F +D+++ + L D E + V G + L++ +TI + + D+NDN P+FEK YSV++ E+ ++A++I+V A+D D G N +TY I + N S+ F I +SGW+ LDRE YQL ++A D GT + + ++D NDN PKF K + I EN + G+ VG++ A+D D G+N + + LLP N +F + G + + + DRE + Y L +E DQG S V I++ DVNDN P + P D +V++E + PG E+++ A D D G+NA+ + I D D +FSIDP G++R + L E Y + + D G P + + + V + D+
Sbjct: 694 GLSTTAMIKMQLT--DVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGN-FGQVSYRIVAG--NEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEA--SMVRIS--VPESAELGAPLYAAHAHDKDS-GSSGQVTY----SLVKESGKGLFA--IDARSGH----LILSQHLDYESSQRHTLIVTATD--GGVPS-LSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRV--IVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPI-NSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQE-------DVVSVREE---------QPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDL 1358 HSP 2 Score: 178.718 bits (452), Expect = 5.174e-45 Identity = 208/796 (26.13%), Postives = 338/796 (42.46%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLS---LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFS-------------SQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRD-SEAANGKLSCWEPRNLYNKQAVIF----KPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTST-MTISLTIADINDNTP-IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKL-EIFENEKPGTEVG----------ILIATDNDEGDNGKLLFKLLPNHNE----NFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKT--PLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESP--GFEILKCEASDLDEGENAAFHFRI---------SLPNDPDIFSIDPQIGILRVKRKLKKELIGDY 2388
Y +KE+ P T +G + + S + R+ Y YF +++N+ ++ +D E + +++N+ L + G +V I V+DVNDN P F S + SV E +G + A D+D S VTY L + F + + L+L + LDYE + + L + A + + T L+I + V ++ND P F++ +Y V+V E+ IN+ IIQV A D D ++ ITYR D SQ+F + + G I+L+ PLD ET + + V A+DN +A T+V++ V+D ND P+F + RIEE ++G +T D D E A + S + + V + PLD + YDL R P+ S + + + ++D+NDN P I + VS+ E P +V++V A D+D G+N +TY I R + LF ID SG + + LD E+ S Y+L + A D G P++ + + ++ N P F + + E+ G VG ++ + + ++ ++ + L P + F +G+L A+ DRE + L+I D + P S TV I + DVNDN P W + IDL + E+ G I A+D D G N +R+ S +F +D G L ++ L E + +Y
Sbjct: 834 YYVKEDIPRGTVVGSV---IAASGDVAHRSPVRYSIYSGDPD-GYFSIETNSGNIRIAKPLDHE------------AKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAE-LGAPLYAAHAHDKD-SGSSGQVTYSLVKESGKGLFAIDARSGH---LILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLD-RELRELYDLVVEAR--------------------DQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSD-GHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNR--PTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPE-----------WPQDP--------IDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEY 1565 HSP 3 Score: 159.073 bits (401), Expect = 6.506e-39 Identity = 190/677 (28.06%), Postives = 290/677 (42.84%), Query Frame = 1
Query: 454 IRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAI--DRDVSKE-HNTVTYKLDADIYSDTFMLKVTNDSFPILVL----KKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS------EITYRSADFSSQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNL----NPSFCRIEEGQPENIIIGQITIWDRDSE-----------AANGKLSCWEPRN-LYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSL--FVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLT------INGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKR 2358
IRV + V+D NDN PTF +S+ E E+++ + RD+ E +NT Y + + +D F L + +L L LD E Y+L I A + + +++ I + ++ND +P F Q +Y +V EN + + ++QV A D D D I R +D Q F + + G I++ + LDFET LH + V A D+ V I V DVND P N+ + + +I E + +I++ D DS+ +G + N +Y VI PLD + Y L + V D+ PL ++ +I L I D+NDN P FE+ +Y ++ E V++V A D+D G N +TY + + PE F ID +G +T +D E E QL +VA+D G P T++ +TI DVNDN P F + + ENE G + + A+D D G N + + + E F +LT +G + A E D E Y + D+G LS T + + + DVNDN P +Y ++ Q S I+ A+D D G +RI N+ IF ID G + V R
Sbjct: 158 IRVLVTVKDENDNAPTFPQTSMHIEFPE-----NTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSD-KEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIY---LVIVHLPLD-REIVSNYTL-SVVATDK------------------GTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSL----AETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATV--LVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTI----GEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGG--LSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASST------------PIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVR 781 HSP 4 Score: 150.599 bits (379), Expect = 2.850e-36 Identity = 180/718 (25.07%), Postives = 322/718 (44.85%), Query Frame = 1
Query: 412 LVVNVWDGLS--LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPK----FKQQKYEVSVEENLPINSMIIQVEAVDEDEDSE-----ITYRSADFSSQYFSVSSKGQ----IFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEI-DNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-------GTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKE--FDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPD-IFSIDPQIGILRVKRKLKKELIGD--YNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
L++ DG + L+G + V I +QDVNDN P F S +V E VG S+ A D D + E+ V Y ++ M ++ + I + KALD+E +L+ L + A + +T ++IRV ++ND +P F + E+ + ++ D D +E +T D +F+++++ + + PLD E S + + V A+D +A+ + + + DVND P+F + + E + Q+ DRD E N L+ + A F+ +D +T + TR D ET + ++ D G PL+ST T+ +TI D+NDN PIF+++ Y+VS+ EN PV ++KV+A+D D G N +V Y I + + + + F + S SG + +LD E+ S Y+ ++A D+G + +++ I + + DVNDN P F P++ ++ E P T + ++ATD D G+ G++ ++++ + F + G + + T + L I D G + V ++I+D PP IF +Y + + + ++ + A+ D + + I DPD FSI+ G +R+ + L E N+Q + G+P ++ + ++D+
Sbjct: 254 LLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENAT-VGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMFRIDPRTGAIYI-NKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGD---GHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRD-EGLNSALT-YSLAETPETHAQWFQ--IDPQTGL----ITTRSHIDC-ETEPVPQLTVVARDGGVP--PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHL----TEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGL----STTAMIKMQLTDVNDNRPVFY-PREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPP--IF--EKARYNYYVKEDIPRGTV-------------VGSVIAASGDVAHRSPVRYSI-YSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATL---GEPPVYGHTQVNIEVEDV 924 HSP 5 Score: 149.058 bits (375), Expect = 9.015e-36 Identity = 182/756 (24.07%), Postives = 312/756 (41.27%), Query Frame = 1
Query: 274 INYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPT----FLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSA---DFSSQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAK-----VIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSG--WVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-GTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN-GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESP--GFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
IN R + F +D T + +D E T E+ +L +V L+ V I V DVNDN PT FL+ + E G+ + D D E+ V L+ F L ++S ++++ LD E Y L++ A + SI +R+ ++ND P+F+Q Y +V E + ++QV A D DE +S +TY A + +Q+F + + G I + +D ET + + V A D ++ V++T+ DVND P F+ + + E +P I +++ D D N + N + + ++ G+ + + F+R + + + L++T I + + D+NDN P+F Y VS+ E+ ++ ++ V ATD D G G V+Y I E +F ID +G +V L + + L I A D G + + + + ++IID P F + + + P GT VG +IA D + + + + +F + N G+++ AK D E + L I+ G+ P+ V I + DVNDN P E+ + +S+ ES G + A D D G + + + + +F+ID + G L + + L E + + + D G PS + ILV +QD+
Sbjct: 325 INRRQSDKEQMFRIDPRTGAIYINKALDFE--------TKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQ-PGEFVARISVHDPDSKTEYANVNVTLNGG--DGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDC-GVNAMV------NYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATD-------RGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRI----VAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNL--RSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQAT-LGEPPVYGHTQVNIEVEDVNDNAPEF-------------------EASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDV 1029 HSP 6 Score: 148.673 bits (374), Expect = 1.194e-35 Identity = 199/762 (26.12%), Postives = 325/762 (42.65%), Query Frame = 1
Query: 394 EMGQLY-LVVNVWD-GLSLKGI-IRVEINVQDVNDNVPTFL-TSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------------EDSEITYR----SADFSSQYFSVS-SKGQIFLKRPLDFETTS-----LHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPR-----NLYNKQAV-IFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIF------EKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKL-----DREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN-GSLQSAKEFDRETTDRYCLQIEINDQGK-TPLSIT----------------------HTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYES--PGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKP-SKMHSQKILVRIQD 2466
E+ +LY LVV D G ++ + V I+V DVNDN P + SV+E G + +A+DRD ++ ++TY + SD L + + ++ + LD+E +Y L + A + ++T + + V+++ND P F V E+ + ++ + ++ ED +TY + D F + G + + R LD E S + +D AS+N ++ V I V DVND AP++ +P ++ E P II T D D+ NG L R N +QA+ +F+ +DS T G L + F E + + V + L +++T+ L I D ND+ P F S+ I + + V + A D+D G NG +TYEI + F I+S +G + L D EK + LII AKD G P+ + SS +++ + ++N P+F+ + I EN G+ V + A +N L +++ + F++ G + + +FDRE+ Y L + + D + + LS + T+ I + DVNDN P++ P + LS+ E+ PG I ASDLDEG NA + I+ N + FSID G L R L +E Y +QI D G+P S+ I + ++D
Sbjct: 1217 ELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREE-QPPGTEVVRVRAVDRD-HGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADT-GTNGDLQYRLIRYFPQLNESQEQAMSLFR--MDSLT--GALSLQAPLDF--EAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNG----EGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHG-QPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNS-----PEFRPGSCY-------------GLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSA-RPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVED 1944 HSP 7 Score: 139.428 bits (350), Expect = 7.108e-33 Identity = 176/697 (25.25%), Postives = 302/697 (43.33%), Query Frame = 1
Query: 466 INVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSAD---FSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEG-----QPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKT---FYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTI-NGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRI------------SLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
+ + DVNDN P F +V EV G S+ A DRD ++ +TY L + ++ F + ++ + +D E + L + A + + ++ + + ++ND EP F Q Y VSV EN P+ I++V A D D ++ + Y + +++ S+ G+I + LDFE S + V A+D + T ++ + + DVND P F + E Q + I + D D G R + +A IF+ +D T F + D+ + VR T I D G ++ + + L+I D PIFEKA Y+ ++E+ P V V A D+ V Y I S +P+ F I+++SG + LD E +S L I A G P + I + ++ N +P+F ++ + E+ + G + A D D G +G++ + L+ + F + +G L ++ D E++ R+ L + D G LS T+ +++ DVNDNPP +F +K+ ++++S S +I++ ASDLD G NA +RI S + F I P G + ++ L +E Y + ++ DNG P+ +++VR+ D
Sbjct: 492 LRITDVNDNPPEFEQDLYHANVMEVA-DPGTSVLQVLAHDRD-EGLNSALTYSLAETPETHAQWFQIDPQTG---LITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDY----GNFGQVSYRIVAGNEAGIFR--IDRSTGEIFVVRPDMLS-VR-----TQPMHMLNISATDGGNLRS--NADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSI---YSGDPD-GYFSIETNSGNIRIAKPLDHEAKSQVLLNIQAT-LGEPPVYGHTQVNIEVEDVNDN--APEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPP--VF---------------EKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLD 1145 HSP 8 Score: 128.642 bits (322), Expect = 1.697e-29 Identity = 188/715 (26.29%), Postives = 298/715 (41.68%), Query Frame = 1
Query: 454 IRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSK----EHNTVTYKLDADIYSDTFMLKVTNDSFP-ILVLKKALDYERCKLYNLAIWAWNSPA---DNQKTKLSITIRVVNINDMEPKF------KQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYR-SADFSSQYFSVSSK-GQIFLKRPL-----DFETTSLHLIDVQASDN----EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXX-------XXXXXXXXXXXGAAKNPLTS-------------TMTISLTIADINDNTPIFE-KAVYSVSIEENNPVDAKVIK-VTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-GTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGS---LQSAKEFDRETTDRYCLQIEINDQGKTPL-SITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDP--DIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSK 2430
I V+I V DVNDN P + I V E VG + A D D ++ + Y + + M DS L L+ LD+E + Y L + A + + + +T +++ +R+++ ND P F + + + + I ++ + AVDED ++ ++TY + F ++S+ G I L + L D E + + A D+ ++ + + V ++ P+F I E P + Q+T A N LS P + N +F + + + TR +FDRE A + +S TI +T+ D+NDN+P F + Y +S+ EN+ + VI V A+D D G N + Y I N F IDS SG ++A LDRE+ S Y L I A D+G PK + C I I + D NDN+P+F K + + P GT V + A D D G N +L++ L NE + I+G + + + DRE Y + D G+ + S T V IN+LD+NDN P IF +Y +I + PG +LK +A D D G NA + ++ N F I+P G L + L E +++++ D G P +
Sbjct: 1469 ITVKIEVADVNDNAPEWPQDPIDLQVSEAT-PVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHG-AENANLSYEIPAGVAND---LFH------VDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENS--EPGVIHTVVASDLDEGPNADLIYSITGGNLGNK----FSIDSSSGELSAR-PLDREQHSRYTLQIQASDRG-QPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLA---NETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRP--IF----ERYPYIGQ-----------VPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQ 2144 HSP 9 Score: 97.4413 bits (241), Expect = 5.729e-20 Identity = 165/705 (23.40%), Postives = 297/705 (42.13%), Query Frame = 1
Query: 442 LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNT---VTYKLDADIYSDTFMLKVTNDSFPI------LVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEV---------SVEENLPINSMIIQVEAVDEDED---SEITY-----------------RSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIII---GQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEK-AVYSVSIEENNPVDAKVIKVTATDKDIGR--NGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKES-FYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXS---PKFIGPKKLEIF-ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNEN-----FFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNV 2394
+ G + + + DVNDN PTF ++++ V ++ EL I + + +T +TY+L A+ D + + F + LVLK+ LDYE + Y L + A ++ + + +T+RV + ND P F Q+ + E+L ++ ++ V A D D + S++ Y S + S +VSS G F++ +I A ++T + + D QF N +I E P ++ GQ + + A + S +E L +A++ PLD + + DLY ++R + +S +++ +TI D NDN PIF++ A Y I E P+ + ++ A D D N V Y+I + ++ +F ID +G + +LD + + Y+LII A D Q C++ ++++D + PKF + + ENE G+ V A+D D+G G+L + + P ++ F + +G + SA FD E RY +++ +D G S+ V I D ++ P++T V ++ + G+ + + A+D D G + +++S P+ F ++ G + +KRKLK + GD N+
Sbjct: 2408 MTGTATIRVQIVDVNDNQPTFPPNNLVT--------VSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSI----FALDRYSGKLVLKRRLDYELQQEYELDVIASDAA---HEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVR-----------IIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAIIAGNEESAFE---LLQSKAIVLVKPLDRE----RNDLY-KLRL---------VLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDI----TSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDS----HHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRD-----------EFTPQFTERTYRFVLPAAVAL------PQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH--FKVNRSSGAVLIKRKLKLDGDGDGNL 3042 HSP 10 Score: 96.6709 bits (239), Expect = 1.099e-19 Identity = 154/560 (27.50%), Postives = 232/560 (41.43%), Query Frame = 1
Query: 697 KKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQY---FSVSSK----GQIFLKRP----LDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQ--ITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP----IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVI---DSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLL--PNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRIS 2295
K LD E Y+L P + ++ +T++ + ND P F Q + EN P + A D D + T R S F +SS G ++L LD ETT + + ++A D V IT+ DVND P FN + F + PEN +G + ++ D++A L + + + +F+ +D +T G + + F+ +E + V + PL +T +S+ + D+NDN P IF S I E+ V +++ D D Y N+ ++N F + D+ V L LDRE S Y L +VA DKGT P + S + IT ++ N P+F + E PGT V ++A D DEG N L + L P + +F + G + + D ET L + D G PLS T TV + I DVNDN P IF ++ + S + E + G ILK ASD D G NA ++ I
Sbjct: 135 KVKLDRETRASYSLVAI----PLSGRNIRVLVTVK--DENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATV----PENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFR--IDPRT--GAIYINKALDFETKELHELVVVAKDH-----GEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPD----SKTEYANVNV-TLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDN--PPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEP--IF-----DQSFYNVSVAENEPV----------GRCILKVSASDPDCGVNAMVNYTIG 651 HSP 11 Score: 96.2857 bits (238), Expect = 1.369e-19 Identity = 125/518 (24.13%), Postives = 216/518 (41.70%), Query Frame = 1
Query: 307 FVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLS---LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLS--------------------------ITIRVVNINDMEPKFKQQK-YEVSVEENL-PINSMIIQVEAVDEDEDSEITYR-SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN----EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRV-RFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPK 1749
F ++S T I++ ++ L P + G+ L++ D K + + + VQ ++N P FL + ++ E + S LQ E+ ++Y++ A + +D F + I+ + D E Y L ++ ++ N+++ LS I I V ++ND P+F+ Y +SV EN P + +DE ++++ Y + FS+ S RPLD E S + + +QASD + + I V D ND AP+F L+ ++E P + QI+ D D N +L +L N+ F G+ L T V + DRE + +++ DG ++T+ + + + DINDN PIFE+ Y + ++KV A D D+G N + Y ++ S K F I+ +G ++A+ L E L +VA+DKG P+
Sbjct: 1656 FRINSQTGIIEL-----VKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENV--PSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRG---IITTRGQFDRESQASYVLPVYVRDA---NRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADL-GVNARLVY----SLANETQWQF-------AIDGQSGLITTVGKLDRE--LQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAK--FRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQ 2144 HSP 12 Score: 82.8037 bits (203), Expect = 1.458e-15 Identity = 103/361 (28.53%), Postives = 164/361 (45.43%), Query Frame = 1
Query: 1420 LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIA--TDNDEGDNGKLLFKLLPN-----HNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQ-KESITIDLSIYESPGFEILKCEASDLD-EGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELI---GDYNVQIIVEDNGKPSKMHSQKILVRIQ 2463
L S + + + D NDN+P F + + ++ E N V +V A D D G N + Y I + N + + + + SG V + LDRE Y+L I+A D+G Q T + TI + I+DVNDN P F + + E TE+G +I + ND L ++L N + F L +G L + D E Y L + +D ++ + + + D NDN P + P Y I + + ES+++D F++L A+D D EG N+ + I + FS+ P G++ V + + GDY V+II +D GKP+ S L+R+Q
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVD---GNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGV--PQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSE----ATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTV---LTVRVNDENDNAP-VFLAQQPPAYFAILPAISEISESLSVD--------FDLLTVNATDADSEGNNSKVIYIIEPAQEG--FSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSS--TLLRVQ 2637 HSP 13 Score: 82.0333 bits (201), Expect = 2.612e-15 Identity = 159/733 (21.69%), Postives = 285/733 (38.88%), Query Frame = 1
Query: 403 QLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQK--AIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSS------QYFSVSS-KGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAP---------QFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKL-----SCWEPRNLYNKQAVI------FKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVT--ATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXS----PKFIGPKK--LEIFENEKPGTEVGILIATDNDEGD--NGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDR-YCLQIEIND-QGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRIS-LPNDPD---IFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQ 2463
++ LV D L + I ++D NDN P F + +V E G K + + A D D + +D + + + F+++ I+ LD E +Y L I A + +I +++V++ND +P F V+V E + ++I + A D D +TYR S+ F++ G++ LKR LD+E + +DV ASD A T + + V D ND AP F + P+ I E + + + D DSE N K+ E +++ V+ +P + S D + R+ A K L S+ + + D F + Y I E P+ + V+++ A D+ + + + N E + ++ S + + LDRE+ Y+L +V P + + + I++I ++ P F K EI E + L A D D+ + N ++++ + ++E+ F + + G L D ++ + Y L I D + PL + + D NDN P+ +Y + +N V G + + ASDLD+G ++ I P+D +F +D + G++ E Y+++++ D G K S + V I+
Sbjct: 2289 RVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSE---GNNKGTFVAQVHAFDSDAGSNARLRYHIVDGN-HDNAFVIEPAFSG--IVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSG-----DYFVRI-----------------IAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLA-----------IIAGNEESAFELLQSKA--IVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEY--VHFLAENEPV---------------GSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMG--GKKASVAVRVEIE 2960 HSP 14 Score: 72.0182 bits (175), Expect = 3.453e-12 Identity = 109/431 (25.29%), Postives = 171/431 (39.68%), Query Frame = 1
Query: 451 IIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLD----AD-IYSDT---FMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWN-SPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSSQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDNE----FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEG-QPENIIIGQITIWDRDSEA-------ANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPI--FEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWV 1665
+ + I V DVNDN P F S YG+ + + H V LD AD IYS T K + DS + + LD E+ Y L I A + +++ +ITI V + ND P+FK KY SV+E+ P+ + ++Q+ AVD D ++ + Y A+ + F++ + G I LD E + + V A+D +A V I V+D+ND P F P ++ QP ++ ++ D D A N + S + N + GK V D+ P +S I L I + TP+ F+ Y V ++EN+P ++++V A D GR V + E + +DS SG +
Sbjct: 1830 VATIYITVGDVNDNSPEFRPGSC--------YGLSVPENSEPGV------IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLL-KVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDK------------------GNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSD-GRRQKVQFSF----GAGNEDGILSLDSLSGEI 2222 HSP 15 Score: 66.2402 bits (160), Expect = 1.871e-10 Identity = 63/229 (27.51%), Postives = 106/229 (46.29%), Query Frame = 1
Query: 1804 SPKFIGPKKLE-IFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL--TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPD-----IFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
SPKF + + + E GT V + A D+D G N +L + ++ +++N F + +G +++ DRE D Y L+I D+G ++ T T+ + I+DVNDN P FP +N E+ + G I A+D+D A +R+ + D IF++D G L +KR+L EL +Y + +I D ++ + VR+ D
Sbjct: 2319 SPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQP--TFPP--------NNLVTVSEATEL--------GAVITSISANDVD--TYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEART---VLTVRVND 2524 HSP 16 Score: 63.1586 bits (152), Expect = 1.517e-9 Identity = 55/182 (30.22%), Postives = 83/182 (45.60%), Query Frame = 1
Query: 1930 LPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISL--PNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
L +H E L ++ LQ + DRETT Y L IE D G PL TV I I DVNDN P IF T +N+TV G +L+ ASD D EN + I+ + +F IDP+ G + + + L E + + ++ +D+G+ + + +R+ D+
Sbjct: 224 LSSHRERDGVLYLD--LQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQP--IFNQSRYFATVPENATV---------------GTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 386
BLAST of Protocadherin gamma vs. Ensembl Fly
Match: ds (gene:FBgn0284247 transcript:FBtr0343249) HSP 1 Score: 204.142 bits (518), Expect = 6.576e-53 Identity = 198/707 (28.01%), Postives = 335/707 (47.38%), Query Frame = 1
Query: 433 GLSLKGIIRVEINVQDVNDNVPTFLTS----SILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCK-LYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ---YFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNE--FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQ----ITIWDRDSEAANGKLSCWEPRNLYNKQA-VIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSL--------FVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPD---IFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
GLS +I++++ DVNDN P F S+ +S K + A D D V+Y++ A ++ + ++ + I V++ + R + ++ L I A + + + +++ P F++ +Y V+E++P +++ V A D R + +S YFS+ ++ G I + +PLD E S L+++QA+ E +T+V I V DVND AP+F S RI PE+ +G D+DS ++G+++ +L + +F +D+++ + L D E + V G + L++ +TI + + D+NDN P+FEK YSV++ E+ ++A++I+V A+D D G N +TY I + N S+ F I +SGW+ LDRE YQL ++A D GT + + ++D NDN PKF K + I EN + G+ VG++ A+D D G+N + + LLP N +F + G + + + DRE + Y L +E DQG S V I++ DVNDN P + P D +V++E + PG E+++ A D D G+NA+ + I D D +FSIDP G++R + L E Y + + D G P + + + V + D+
Sbjct: 694 GLSTTAMIKMQLT--DVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGN-FGQVSYRIVAG--NEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEA--SMVRIS--VPESAELGAPLYAAHAHDKDS-GSSGQVTY----SLVKESGKGLFA--IDARSGH----LILSQHLDYESSQRHTLIVTATD--GGVPS-LSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRV--IVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPI-NSSFQVHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQE-------DVVSVREE---------QPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDL 1358 HSP 2 Score: 178.718 bits (452), Expect = 5.174e-45 Identity = 208/796 (26.13%), Postives = 338/796 (42.46%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLS---LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFS-------------SQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRD-SEAANGKLSCWEPRNLYNKQAVIF----KPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTST-MTISLTIADINDNTP-IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKL-EIFENEKPGTEVG----------ILIATDNDEGDNGKLLFKLLPNHNE----NFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKT--PLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESP--GFEILKCEASDLDEGENAAFHFRI---------SLPNDPDIFSIDPQIGILRVKRKLKKELIGDY 2388
Y +KE+ P T +G + + S + R+ Y YF +++N+ ++ +D E + +++N+ L + G +V I V+DVNDN P F S + SV E +G + A D+D S VTY L + F + + L+L + LDYE + + L + A + + T L+I + V ++ND P F++ +Y V+V E+ IN+ IIQV A D D ++ ITYR D SQ+F + + G I+L+ PLD ET + + V A+DN +A T+V++ V+D ND P+F + RIEE ++G +T D D E A + S + + V + PLD + YDL R P+ S + + + ++D+NDN P I + VS+ E P +V++V A D+D G+N +TY I R + LF ID SG + + LD E+ S Y+L + A D G P++ + + ++ N P F + + E+ G VG ++ + + ++ ++ + L P + F +G+L A+ DRE + L+I D + P S TV I + DVNDN P W + IDL + E+ G I A+D D G N +R+ S +F +D G L ++ L E + +Y
Sbjct: 834 YYVKEDIPRGTVVGSV---IAASGDVAHRSPVRYSIYSGDPD-GYFSIETNSGNIRIAKPLDHE------------AKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAE-LGAPLYAAHAHDKD-SGSSGQVTYSLVKESGKGLFAIDARSGH---LILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLD-RELRELYDLVVEAR--------------------DQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSD-GHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNR--PTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPE-----------WPQDP--------IDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEY 1565 HSP 3 Score: 159.073 bits (401), Expect = 6.506e-39 Identity = 190/677 (28.06%), Postives = 290/677 (42.84%), Query Frame = 1
Query: 454 IRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAI--DRDVSKE-HNTVTYKLDADIYSDTFMLKVTNDSFPILVL----KKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS------EITYRSADFSSQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNL----NPSFCRIEEGQPENIIIGQITIWDRDSE-----------AANGKLSCWEPRN-LYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSL--FVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLT------INGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKR 2358
IRV + V+D NDN PTF +S+ E E+++ + RD+ E +NT Y + + +D F L + +L L LD E Y+L I A + + +++ I + ++ND +P F Q +Y +V EN + + ++QV A D D D I R +D Q F + + G I++ + LDFET LH + V A D+ V I V DVND P N+ + + +I E + +I++ D DS+ +G + N +Y VI PLD + Y L + V D+ PL ++ +I L I D+NDN P FE+ +Y ++ E V++V A D+D G N +TY + + PE F ID +G +T +D E E QL +VA+D G P T++ +TI DVNDN P F + + ENE G + + A+D D G N + + + E F +LT +G + A E D E Y + D+G LS T + + + DVNDN P +Y ++ Q S I+ A+D D G +RI N+ IF ID G + V R
Sbjct: 158 IRVLVTVKDENDNAPTFPQTSMHIEFPE-----NTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSD-KEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIY---LVIVHLPLD-REIVSNYTL-SVVATDK------------------GTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSL----AETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATV--LVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTI----GEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGG--LSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASST------------PIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVR 781 HSP 4 Score: 150.599 bits (379), Expect = 2.850e-36 Identity = 180/718 (25.07%), Postives = 322/718 (44.85%), Query Frame = 1
Query: 412 LVVNVWDGLS--LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPK----FKQQKYEVSVEENLPINSMIIQVEAVDEDEDSE-----ITYRSADFSSQYFSVSSKGQ----IFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEI-DNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-------GTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKE--FDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPD-IFSIDPQIGILRVKRKLKKELIGD--YNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
L++ DG + L+G + V I +QDVNDN P F S +V E VG S+ A D D + E+ V Y ++ M ++ + I + KALD+E +L+ L + A + +T ++IRV ++ND +P F + E+ + ++ D D +E +T D +F+++++ + + PLD E S + + V A+D +A+ + + + DVND P+F + + E + Q+ DRD E N L+ + A F+ +D +T + TR D ET + ++ D G PL+ST T+ +TI D+NDN PIF+++ Y+VS+ EN PV ++KV+A+D D G N +V Y I + + + + F + S SG + +LD E+ S Y+ ++A D+G + +++ I + + DVNDN P F P++ ++ E P T + ++ATD D G+ G++ ++++ + F + G + + T + L I D G + V ++I+D PP IF +Y + + + ++ + A+ D + + I DPD FSI+ G +R+ + L E N+Q + G+P ++ + ++D+
Sbjct: 254 LLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPENAT-VGTSVLQVYASDTD-ADENGLVEYAINRRQSDKEQMFRIDPRTGAIYI-NKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPDSKTEYANVNVTLNGGD---GHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRD-EGLNSALT-YSLAETPETHAQWFQ--IDPQTGL----ITTRSHIDC-ETEPVPQLTVVARDGGVP--PLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHL----TEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGL----STTAMIKMQLTDVNDNRPVFY-PREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPP--IF--EKARYNYYVKEDIPRGTV-------------VGSVIAASGDVAHRSPVRYSI-YSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATL---GEPPVYGHTQVNIEVEDV 924 HSP 5 Score: 149.058 bits (375), Expect = 9.015e-36 Identity = 182/756 (24.07%), Postives = 312/756 (41.27%), Query Frame = 1
Query: 274 INYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPT----FLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSA---DFSSQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAK-----VIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSG--WVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-GTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN-GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESP--GFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
IN R + F +D T + +D E T E+ +L +V L+ V I V DVNDN PT FL+ + E G+ + D D E+ V L+ F L ++S ++++ LD E Y L++ A + SI +R+ ++ND P+F+Q Y +V E + ++QV A D DE +S +TY A + +Q+F + + G I + +D ET + + V A D ++ V++T+ DVND P F+ + + E +P I +++ D D N + N + + ++ G+ + + F+R + + + L++T I + + D+NDN P+F Y VS+ E+ ++ ++ V ATD D G G V+Y I E +F ID +G +V L + + L I A D G + + + + ++IID P F + + + P GT VG +IA D + + + + +F + N G+++ AK D E + L I+ G+ P+ V I + DVNDN P E+ + +S+ ES G + A D D G + + + + +F+ID + G L + + L E + + + D G PS + ILV +QD+
Sbjct: 325 INRRQSDKEQMFRIDPRTGAIYINKALDFE--------TKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQ-PGEFVARISVHDPDSKTEYANVNVTLNGG--DGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDC-GVNAMV------NYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATD-------RGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRI----VAGNEAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLNISATDGGNL--RSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQAT-LGEPPVYGHTQVNIEVEDVNDNAPEF-------------------EASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDV 1029 HSP 6 Score: 148.673 bits (374), Expect = 1.194e-35 Identity = 199/762 (26.12%), Postives = 325/762 (42.65%), Query Frame = 1
Query: 394 EMGQLY-LVVNVWD-GLSLKGI-IRVEINVQDVNDNVPTFL-TSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------------EDSEITYR----SADFSSQYFSVS-SKGQIFLKRPLDFETTS-----LHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPR-----NLYNKQAV-IFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIF------EKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKL-----DREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN-GSLQSAKEFDRETTDRYCLQIEINDQGK-TPLSIT----------------------HTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYES--PGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKP-SKMHSQKILVRIQD 2466
E+ +LY LVV D G ++ + V I+V DVNDN P + SV+E G + +A+DRD ++ ++TY + SD L + + ++ + LD+E +Y L + A + ++T + + V+++ND P F V E+ + ++ + ++ ED +TY + D F + G + + R LD E S + +D AS+N ++ V I V DVND AP++ +P ++ E P II T D D+ NG L R N +QA+ +F+ +DS T G L + F E + + V + L +++T+ L I D ND+ P F S+ I + + V + A D+D G NG +TYEI + F I+S +G + L D EK + LII AKD G P+ + SS +++ + ++N P+F+ + I EN G+ V + A +N L +++ + F++ G + + +FDRE+ Y L + + D + + LS + T+ I + DVNDN P++ P + LS+ E+ PG I ASDLDEG NA + I+ N + FSID G L R L +E Y +QI D G+P S+ I + ++D
Sbjct: 1217 ELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVSVREE-QPPGTEVVRVRAVDRD-HGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADT-GTNGDLQYRLIRYFPQLNESQEQAMSLFR--MDSLT--GALSLQAPLDF--EAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNG----EGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHG-QPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNS-----PEFRPGSCY-------------GLSVPENSEPGV-IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSA-RPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVED 1944 HSP 7 Score: 139.428 bits (350), Expect = 7.108e-33 Identity = 176/697 (25.25%), Postives = 302/697 (43.33%), Query Frame = 1
Query: 466 INVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSAD---FSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEG-----QPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKT---FYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTI-NGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRI------------SLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
+ + DVNDN P F +V EV G S+ A DRD ++ +TY L + ++ F + ++ + +D E + L + A + + ++ + + ++ND EP F Q Y VSV EN P+ I++V A D D ++ + Y + +++ S+ G+I + LDFE S + V A+D + T ++ + + DVND P F + E Q + I + D D G R + +A IF+ +D T F + D+ + VR T I D G ++ + + L+I D PIFEKA Y+ ++E+ P V V A D+ V Y I S +P+ F I+++SG + LD E +S L I A G P + I + ++ N +P+F ++ + E+ + G + A D D G +G++ + L+ + F + +G L ++ D E++ R+ L + D G LS T+ +++ DVNDNPP +F +K+ ++++S S +I++ ASDLD G NA +RI S + F I P G + ++ L +E Y + ++ DNG P+ +++VR+ D
Sbjct: 492 LRITDVNDNPPEFEQDLYHANVMEVA-DPGTSVLQVLAHDRD-EGLNSALTYSLAETPETHAQWFQIDPQTG---LITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKASSQASSTPIVAVVATDPDY----GNFGQVSYRIVAGNEAGIFR--IDRSTGEIFVVRPDMLS-VR-----TQPMHMLNISATDGGNLRS--NADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDVAHRSPVRYSI---YSGDPD-GYFSIETNSGNIRIAKPLDHEAKSQVLLNIQAT-LGEPPVYGHTQVNIEVEDVNDN--APEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPP--VF---------------EKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLD 1145 HSP 8 Score: 128.642 bits (322), Expect = 1.697e-29 Identity = 188/715 (26.29%), Postives = 298/715 (41.68%), Query Frame = 1
Query: 454 IRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSK----EHNTVTYKLDADIYSDTFMLKVTNDSFP-ILVLKKALDYERCKLYNLAIWAWNSPA---DNQKTKLSITIRVVNINDMEPKF------KQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYR-SADFSSQYFSVSSK-GQIFLKRPL-----DFETTSLHLIDVQASDN----EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXX-------XXXXXXXXXXXGAAKNPLTS-------------TMTISLTIADINDNTPIFE-KAVYSVSIEENNPVDAKVIK-VTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-GTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGS---LQSAKEFDRETTDRYCLQIEINDQGKTPL-SITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDP--DIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSK 2430
I V+I V DVNDN P + I V E VG + A D D ++ + Y + + M DS L L+ LD+E + Y L + A + + + +T +++ +R+++ ND P F + + + + I ++ + AVDED ++ ++TY + F ++S+ G I L + L D E + + A D+ ++ + + V ++ P+F I E P + Q+T A N LS P + N +F + + + TR +FDRE A + +S TI +T+ D+NDN+P F + Y +S+ EN+ + VI V A+D D G N + Y I N F IDS SG ++A LDRE+ S Y L I A D+G PK + C I I + D NDN+P+F K + + P GT V + A D D G N +L++ L NE + I+G + + + DRE Y + D G+ + S T V IN+LD+NDN P IF +Y +I + PG +LK +A D D G NA + ++ N F I+P G L + L E +++++ D G P +
Sbjct: 1469 ITVKIEVADVNDNAPEWPQDPIDLQVSEAT-PVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKSLHG-AENANLSYEIPAGVAND---LFH------VDWQRGIITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENS--EPGVIHTVVASDLDEGPNADLIYSITGGNLGNK----FSIDSSSGELSAR-PLDREQHSRYTLQIQASDRG-QPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLA---NETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRP--IF----ERYPYIGQ-----------VPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQ 2144 HSP 9 Score: 97.4413 bits (241), Expect = 5.729e-20 Identity = 165/705 (23.40%), Postives = 297/705 (42.13%), Query Frame = 1
Query: 442 LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNT---VTYKLDADIYSDTFMLKVTNDSFPI------LVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEV---------SVEENLPINSMIIQVEAVDEDED---SEITY-----------------RSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIII---GQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEK-AVYSVSIEENNPVDAKVIKVTATDKDIGR--NGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKES-FYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXS---PKFIGPKKLEIF-ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNEN-----FFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNV 2394
+ G + + + DVNDN PTF ++++ V ++ EL I + + +T +TY+L A+ D + + F + LVLK+ LDYE + Y L + A ++ + + +T+RV + ND P F Q+ + E+L ++ ++ V A D D + S++ Y S + S +VSS G F++ +I A ++T + + D QF N +I E P ++ GQ + + A + S +E L +A++ PLD + + DLY ++R + +S +++ +TI D NDN PIF++ A Y I E P+ + ++ A D D N V Y+I + ++ +F ID +G + +LD + + Y+LII A D Q C++ ++++D + PKF + + ENE G+ V A+D D+G G+L + + P ++ F + +G + SA FD E RY +++ +D G S+ V I D ++ P++T V ++ + G+ + + A+D D G + +++S P+ F ++ G + +KRKLK + GD N+
Sbjct: 2408 MTGTATIRVQIVDVNDNQPTFPPNNLVT--------VSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSI----FALDRYSGKLVLKRRLDYELQQEYELDVIASDAA---HEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSGDYFVR-----------IIAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLAIIAGNEESAFE---LLQSKAIVLVKPLDRE----RNDLY-KLRL---------VLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDI----TSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDS----HHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRD-----------EFTPQFTERTYRFVLPAAVAL------PQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH--FKVNRSSGAVLIKRKLKLDGDGDGNL 3042 HSP 10 Score: 96.6709 bits (239), Expect = 1.099e-19 Identity = 154/560 (27.50%), Postives = 232/560 (41.43%), Query Frame = 1
Query: 697 KKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQY---FSVSSK----GQIFLKRP----LDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQ--ITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP----IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVI---DSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLL--PNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRIS 2295
K LD E Y+L P + ++ +T++ + ND P F Q + EN P + A D D + T R S F +SS G ++L LD ETT + + ++A D V IT+ DVND P FN + F + PEN +G + ++ D++A L + + + +F+ +D +T G + + F+ +E + V + PL +T +S+ + D+NDN P IF S I E+ V +++ D D Y N+ ++N F + D+ V L LDRE S Y L +VA DKGT P + S + IT ++ N P+F + E PGT V ++A D DEG N L + L P + +F + G + + D ET L + D G PLS T TV + I DVNDN P IF ++ + S + E + G ILK ASD D G NA ++ I
Sbjct: 135 KVKLDRETRASYSLVAI----PLSGRNIRVLVTVK--DENDNAPTFPQTSMHIEFPENTPREVKRTLLPARDLDLEPYNTQRYNIVSGNVNDAFRLSSHRERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATV----PENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFR--IDPRT--GAIYINKALDFETKELHELVVVAKDH-----GEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASPKISESAQPGEFVARISVHDPD----SKTEYANVNV-TLNGGDGHFALTTRDNSIYLVIVHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDN--PPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRSHIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEP--IF-----DQSFYNVSVAENEPV----------GRCILKVSASDPDCGVNAMVNYTIG 651 HSP 11 Score: 96.2857 bits (238), Expect = 1.369e-19 Identity = 125/518 (24.13%), Postives = 216/518 (41.70%), Query Frame = 1
Query: 307 FVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLS---LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLS--------------------------ITIRVVNINDMEPKFKQQK-YEVSVEENL-PINSMIIQVEAVDEDEDSEITYR-SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN----EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRV-RFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPK 1749
F ++S T I++ ++ L P + G+ L++ D K + + + VQ ++N P FL + ++ E + S LQ E+ ++Y++ A + +D F + I+ + D E Y L ++ ++ N+++ LS I I V ++ND P+F+ Y +SV EN P + +DE ++++ Y + FS+ S RPLD E S + + +QASD + + I V D ND AP+F L+ ++E P + QI+ D D N +L +L N+ F G+ L T V + DRE + +++ DG ++T+ + + + DINDN PIFE+ Y + ++KV A D D+G N + Y ++ S K F I+ +G ++A+ L E L +VA+DKG P+
Sbjct: 1656 FRINSQTGIIEL-----VKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENV--PSGSFVLQVTAKSLHGAENANLSYEIPAGVANDLFHVDWQRG---IITTRGQFDRESQASYVLPVYVRDA---NRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADL-GVNARLVY----SLANETQWQF-------AIDGQSGLITTVGKLDRE--LQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAK--FRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQ 2144 HSP 12 Score: 82.8037 bits (203), Expect = 1.458e-15 Identity = 103/361 (28.53%), Postives = 164/361 (45.43%), Query Frame = 1
Query: 1420 LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIA--TDNDEGDNGKLLFKLLPN-----HNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQ-KESITIDLSIYESPGFEILKCEASDLD-EGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELI---GDYNVQIIVEDNGKPSKMHSQKILVRIQ 2463
L S + + + D NDN+P F + + ++ E N V +V A D D G N + Y I + N + + + + SG V + LDRE Y+L I+A D+G Q T + TI + I+DVNDN P F + + E TE+G +I + ND L ++L N + F L +G L + D E Y L + +D ++ + + + D NDN P + P Y I + + ES+++D F++L A+D D EG N+ + I + FS+ P G++ V + + GDY V+II +D GKP+ S L+R+Q
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVD---GNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGV--PQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSE----ATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTV---LTVRVNDENDNAP-VFLAQQPPAYFAILPAISEISESLSVD--------FDLLTVNATDADSEGNNSKVIYIIEPAQEG--FSVHPSNGVVSVNMSRLQPAVSSSGDYFVRIIAKDAGKPALKSS--TLLRVQ 2637 HSP 13 Score: 82.0333 bits (201), Expect = 2.612e-15 Identity = 159/733 (21.69%), Postives = 285/733 (38.88%), Query Frame = 1
Query: 403 QLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQK--AIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSS------QYFSVSS-KGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAP---------QFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKL-----SCWEPRNLYNKQAVI------FKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVT--ATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXS----PKFIGPKK--LEIFENEKPGTEVGILIATDNDEGD--NGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDR-YCLQIEIND-QGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRIS-LPNDPD---IFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQ 2463
++ LV D L + I ++D NDN P F + +V E G K + + A D D + +D + + + F+++ I+ LD E +Y L I A + +I +++V++ND +P F V+V E + ++I + A D D +TYR S+ F++ G++ LKR LD+E + +DV ASD A T + + V D ND AP F + P+ I E + + + D DSE N K+ E +++ V+ +P + S D + R+ A K L S+ + + D F + Y I E P+ + V+++ A D+ + + + N E + ++ S + + LDRE+ Y+L +V P + + + I++I ++ P F K EI E + L A D D+ + N ++++ + ++E+ F + + G L D ++ + Y L I D + PL + + D NDN P+ +Y + +N V G + + ASDLD+G ++ I P+D +F +D + G++ E Y+++++ D G K S + V I+
Sbjct: 2289 RVVLVARTADAPFLASYAELVIELEDENDNSPKFSQKQFVATVSE---GNNKGTFVAQVHAFDSDAGSNARLRYHIVDGN-HDNAFVIEPAFSG--IVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNL-VTVSEATELGAVITSISANDVDTYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEARTVLTVRVNDENDNAPVFLAQQPPAYFAILPAISEISESLSVDFDLLTVNATDADSEGNNSKVIYIIEPAQEGFSVHPSNGVVSVNMSRLQPAVSSSG-----DYFVRI-----------------IAKDAGKPALKSSTLLRVQANDNGSGRSQFLQNQYRAQISEAAPLGSVVLQLGQDALDQSLA-----------IIAGNEESAFELLQSKA--IVLVKPLDRERNDLYKLRLVLSHPHGPPLISSLNSSSGISVIITILDANDNFPIFDRSAKYEAEISELAPLRYSIAQLQAIDADQENTPNSEVVYDITSGNDEHMFTIDLVTGVLFVNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEY--VHFLAENEPV---------------GSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQRYDMELLASDMG--GKKASVAVRVEIE 2960 HSP 14 Score: 72.0182 bits (175), Expect = 3.453e-12 Identity = 109/431 (25.29%), Postives = 171/431 (39.68%), Query Frame = 1
Query: 451 IIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLD----AD-IYSDT---FMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWN-SPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSSQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDNE----FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEG-QPENIIIGQITIWDRDSEA-------ANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPI--FEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWV 1665
+ + I V DVNDN P F S YG+ + + H V LD AD IYS T K + DS + + LD E+ Y L I A + +++ +ITI V + ND P+FK KY SV+E+ P+ + ++Q+ AVD D ++ + Y A+ + F++ + G I LD E + + V A+D +A V I V+D+ND P F P ++ QP ++ ++ D D A N + S + N + GK V D+ P +S I L I + TP+ F+ Y V ++EN+P ++++V A D GR V + E + +DS SG +
Sbjct: 1830 VATIYITVGDVNDNSPEFRPGSC--------YGLSVPENSEPGV------IHTVVASDLDEGPNADLIYSITGGNLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYPYIGQVPALIQPGQTLL-KVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDK------------------GNPPQSSLGLIELLIGEAPQGTPVLRFQNETYRVMLKENSPSGTRLLQVVALRSD-GRRQKVQFSF----GAGNEDGILSLDSLSGEI 2222 HSP 15 Score: 66.2402 bits (160), Expect = 1.871e-10 Identity = 63/229 (27.51%), Postives = 106/229 (46.29%), Query Frame = 1
Query: 1804 SPKFIGPKKLE-IFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL--TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPD-----IFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
SPKF + + + E GT V + A D+D G N +L + ++ +++N F + +G +++ DRE D Y L+I D+G ++ T T+ + I+DVNDN P FP +N E+ + G I A+D+D A +R+ + D IF++D G L +KR+L EL +Y + +I D ++ + VR+ D
Sbjct: 2319 SPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQP--TFPP--------NNLVTVSEATEL--------GAVITSISANDVD--TYPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEYELDVIASDAAHEART---VLTVRVND 2524 HSP 16 Score: 63.1586 bits (152), Expect = 1.517e-9 Identity = 55/182 (30.22%), Postives = 83/182 (45.60%), Query Frame = 1
Query: 1930 LPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISL--PNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
L +H E L ++ LQ + DRETT Y L IE D G PL TV I I DVNDN P IF T +N+TV G +L+ ASD D EN + I+ + +F IDP+ G + + + L E + + ++ +D+G+ + + +R+ D+
Sbjct: 224 LSSHRERDGVLYLD--LQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQP--IFNQSRYFATVPENATV---------------GTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDV 386
BLAST of Protocadherin gamma vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0339463) HSP 1 Score: 194.126 bits (492), Expect = 9.333e-50 Identity = 197/717 (27.48%), Postives = 320/717 (44.63%), Query Frame = 1
Query: 292 KQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIR-----VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNT-VTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQY-FSVSSK-GQIFLKRPLDFETTSLHLIDVQASDNEF---NANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAA-NGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTY-----EIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNEN--FFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKEL 2376
+++ F +DS + ++ T++ +D E +L+V D S + R V++ V D NDN P F + V E +G + + D + +N + Y + F + + + L K LDYE + Y L I A + + ++ + + V++ ND P+F +++ SV EN+P+ II+V+A D DE ++EITY ++ + +V + G + +PLD E V A D +A++ VVITV DVND P FN + E QP + +T D D ++ + +++ R + + S+ G + + + +E+ ++ + T T+ + I D N+ PIFE A YS S+ E+ PV V+ V+ATD D+G N +TY I+ L S +P F I+ +G + LDRE S Y L + AKD G T+ + I + DVNDN+P F P + I E+ GT V + A+D D G NG++ + L E+ F +G++++ K DRE+ + L D+G PLS T V I + DVND+PP T + IT+ + G + + A D DEG NA H+ I +D + FS+ + G R + EL
Sbjct: 516 QEMPIFRIDSRSGVISTRSSLDRET----------SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGD---VSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRF---------AITSQNGRGLITIAQSLDYKQEK-------RFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP----FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTD--VEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP-----------------TFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTEL 1180 HSP 2 Score: 189.504 bits (480), Expect = 2.655e-48 Identity = 211/808 (26.11%), Postives = 366/808 (45.30%), Query Frame = 1
Query: 175 AIKENQPGQTRIGKIS----EDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLK-GIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSK----EHNTVTYKLDADIYSDTFMLKVTNDSFP-ILVLKKALDYERCKLYNLAIWAWN---SPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENL---PINSMIIQVEAVDEDEDSEITYRSA----DFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIG----QITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDS--GWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL------TIN---GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDI----FSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++ E QP + + ED P+ M+ ++ R Q S F +DS T ++ T +D EL H + VV D + G +++NV D ND+ PTF S++E VG ++ +A D+D+ K E+ A + D M DS ++ + +LD E Y+L + A + + ++ + S+ ++V++ ND P+F ++ Y V V E+ ++ + + A D D+ + R A + SQ+ S G + L +PLD+E+ + + ++A D + T++++ V+D ND AP+F + + +E EN+ +G ++ +D D E AN +++ +++ F +D +T + + T DREE +V+ P +++ ++ +T+ D+NDN P F Y ++ E+ P V VTATD D + + YEI + + F I S + G +T LD ++E + L + A D G ++ + T++I I D N+ +P F P +FE+ GT V ++ ATD+D G N ++ + L + E+ L +IN G++ + DRETT Y L + D G LS T V I + DVNDN P P Y + SI D + G +++ ASD D G N + +S D DI F IDP G +R + L +E + +++ I D G P + ++ +R++D+
Sbjct: 367 SVLEEQPAGAAVTTVRARDPEDSPVVYSMV-----SLLDSRSQ---SLFKVDSRTGVVTTSASLD-RELMDVH--------YFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGAT-VGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTS----QFQESVLENVPVGYNIIRVQAYDSD-EGANAEIT-----YSISERDDNFPLAVDPRTGW----VQTIKPLDREEQGRFAFQVVAKD---GGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI----TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG----RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL---NEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLY-------------QASILEDALV----GTSVIQVAASDPDVGLNGRIKYLLS---DRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDV 1106 HSP 3 Score: 171.785 bits (434), Expect = 9.074e-43 Identity = 188/711 (26.44%), Postives = 306/711 (43.04%), Query Frame = 1
Query: 412 LVVNVWDGLS--LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILV--------LKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR-SADFSSQYFSVSS---KGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRD------------SEAANGKLSCWEPRNLYNKQ--AVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNP-LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAK-----EFDRETT-DRYCLQIEINDQGKTPLSITHTVCINILDVNDNPP-----RLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDN 2415
LV+ DG S ++ +NV D NDN P F TS +SV E + VG ++ +A D D +A+I T+ + +D+FP+ V K LD E + + A + + S+ I V ++ND +P F + YE +V E+ P + + V A D DEDS + Y + + F+++S +G I + + LD++ L+ V A+D+ ++T V I + D N+ AP F P + E P + ++ D D E+ NG L +P ++ N Q A++ PLD +T G L T D NP L+ T + + + D+NDN P F+ +Y SI E+ V VI+V A+D D+G NG + Y + + + E FVID SG + LDRE + + L +A DKG+ P SS ++ ++SP K+ ++ EN G+ VG + A D DEG N + + ++ + N F L + A+ E D E+T R+ L + PL + I + DVNDN P ++IF ++ + P EI + A D D + H+RI N+ ++ ++ G L + +L + +++ V D
Sbjct: 657 LVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENV-PVGYNIIRVQAYDSDEGA---------NAEI---TYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESING-LGSPDPFSI-NPQTGAIVTNAPLDRETTSGY--LLTVTAKD-------------------GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSD---RDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP---LSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVR---AASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHF----------------------PSGEIGRIPAFDADVSDK--LHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVSVSDG 1298 HSP 4 Score: 102.064 bits (253), Expect = 2.384e-21 Identity = 97/354 (27.40%), Postives = 162/354 (45.76%), Query Frame = 1
Query: 1456 DINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLF---------KLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTP---LSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFE---ILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
++ + +P FE+A+Y S+ E P A V V A D + + V Y + +L +SLF +DS +G VT + LDRE + +VA D P+ T++ + + ++D ND+SP F + + I E G+ V L ATD D G N ++ + L + F + + +G + + DRET+D Y L + D + T +V + +LD NDN P+ + + T+ + + G E + A+D D+G NAA + I N FSID G + + + L E + Y + I +D G PS+ ++ ++LV + D
Sbjct: 351 ELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPE---DSPVVYSMVSLLDSR-SQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTT--LQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF-----------------SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVID 681
BLAST of Protocadherin gamma vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0330601) HSP 1 Score: 194.126 bits (492), Expect = 1.013e-49 Identity = 197/717 (27.48%), Postives = 320/717 (44.63%), Query Frame = 1
Query: 292 KQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIR-----VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNT-VTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQY-FSVSSK-GQIFLKRPLDFETTSLHLIDVQASDNEF---NANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAA-NGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTY-----EIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNEN--FFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKEL 2376
+++ F +DS + ++ T++ +D E +L+V D S + R V++ V D NDN P F + V E +G + + D + +N + Y + F + + + L K LDYE + Y L I A + + ++ + + V++ ND P+F +++ SV EN+P+ II+V+A D DE ++EITY ++ + +V + G + +PLD E V A D +A++ VVITV DVND P FN + E QP + +T D D ++ + +++ R + + S+ G + + + +E+ ++ + T T+ + I D N+ PIFE A YS S+ E+ PV V+ V+ATD D+G N +TY I+ L S +P F I+ +G + LDRE S Y L + AKD G T+ + I + DVNDN+P F P + I E+ GT V + A+D D G NG++ + L E+ F +G++++ K DRE+ + L D+G PLS T V I + DVND+PP T + IT+ + G + + A D DEG NA H+ I +D + FS+ + G R + EL
Sbjct: 516 QEMPIFRIDSRSGVISTRSSLDRET----------SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGD---VSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRF---------AITSQNGRGLITIAQSLDYKQEK-------RFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP----FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTD--VEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP-----------------TFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTEL 1180 HSP 2 Score: 189.119 bits (479), Expect = 3.008e-48 Identity = 211/808 (26.11%), Postives = 366/808 (45.30%), Query Frame = 1
Query: 175 AIKENQPGQTRIGKIS----EDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLK-GIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSK----EHNTVTYKLDADIYSDTFMLKVTNDSFP-ILVLKKALDYERCKLYNLAIWAWN---SPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENL---PINSMIIQVEAVDEDEDSEITYRSA----DFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIG----QITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDS--GWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL------TIN---GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDI----FSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++ E QP + + ED P+ M+ ++ R Q S F +DS T ++ T +D EL H + VV D + G +++NV D ND+ PTF S++E VG ++ +A D+D+ K E+ A + D M DS ++ + +LD E Y+L + A + + ++ + S+ ++V++ ND P+F ++ Y V V E+ ++ + + A D D+ + R A + SQ+ S G + L +PLD+E+ + + ++A D + T++++ V+D ND AP+F + + +E EN+ +G ++ +D D E AN +++ +++ F +D +T + + T DREE +V+ P +++ ++ +T+ D+NDN P F Y ++ E+ P V VTATD D + + YEI + + F I S + G +T LD ++E + L + A D G ++ + T++I I D N+ +P F P +FE+ GT V ++ ATD+D G N ++ + L + E+ L +IN G++ + DRETT Y L + D G LS T V I + DVNDN P P Y + SI D + G +++ ASD D G N + +S D DI F IDP G +R + L +E + +++ I D G P + ++ +R++D+
Sbjct: 367 SVLEEQPAGAAVTTVRARDPEDSPVVYSMV-----SLLDSRSQ---SLFKVDSRTGVVTTSASLD-RELMDVH--------YFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGAT-VGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTS----QFQESVLENVPVGYNIIRVQAYDSD-EGANAEIT-----YSISERDDNFPLAVDPRTGW----VQTIKPLDREEQGRFAFQVVAKD---GGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI----TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG----RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL---NEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLY-------------QASILEDALV----GTSVIQVAASDPDVGLNGRIKYLLS---DRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDV 1106 HSP 3 Score: 171.4 bits (433), Expect = 9.919e-43 Identity = 188/711 (26.44%), Postives = 306/711 (43.04%), Query Frame = 1
Query: 412 LVVNVWDGLS--LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILV--------LKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR-SADFSSQYFSVSS---KGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRD------------SEAANGKLSCWEPRNLYNKQ--AVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNP-LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAK-----EFDRETT-DRYCLQIEINDQGKTPLSITHTVCINILDVNDNPP-----RLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDN 2415
LV+ DG S ++ +NV D NDN P F TS +SV E + VG ++ +A D D +A+I T+ + +D+FP+ V K LD E + + A + + S+ I V ++ND +P F + YE +V E+ P + + V A D DEDS + Y + + F+++S +G I + + LD++ L+ V A+D+ ++T V I + D N+ AP F P + E P + ++ D D E+ NG L +P ++ N Q A++ PLD +T G L T D NP L+ T + + + D+NDN P F+ +Y SI E+ V VI+V A+D D+G NG + Y + + + E FVID SG + LDRE + + L +A DKG+ P SS ++ ++SP K+ ++ EN G+ VG + A D DEG N + + ++ + N F L + A+ E D E+T R+ L + PL + I + DVNDN P ++IF ++ + P EI + A D D + H+RI N+ ++ ++ G L + +L + +++ V D
Sbjct: 657 LVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENV-PVGYNIIRVQAYDSDEGA---------NAEI---TYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESING-LGSPDPFSI-NPQTGAIVTNAPLDRETTSGY--LLTVTAKD-------------------GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSD---RDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP---LSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVR---AASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHF----------------------PSGEIGRIPAFDADVSDK--LHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVSVSDG 1298 HSP 4 Score: 101.679 bits (252), Expect = 2.711e-21 Identity = 97/354 (27.40%), Postives = 162/354 (45.76%), Query Frame = 1
Query: 1456 DINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLF---------KLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTP---LSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFE---ILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
++ + +P FE+A+Y S+ E P A V V A D + + V Y + +L +SLF +DS +G VT + LDRE + +VA D P+ T++ + + ++D ND+SP F + + I E G+ V L ATD D G N ++ + L + F + + +G + + DRET+D Y L + D + T +V + +LD NDN P+ + + T+ + + G E + A+D D+G NAA + I N FSID G + + + L E + Y + I +D G PS+ ++ ++LV + D
Sbjct: 351 ELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPE---DSPVVYSMVSLLDSR-SQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTT--LQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF-----------------SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVID 681
BLAST of Protocadherin gamma vs. Ensembl Fly
Match: stan (gene:FBgn0024836 transcript:FBtr0304899) HSP 1 Score: 193.741 bits (491), Expect = 1.070e-49 Identity = 197/717 (27.48%), Postives = 320/717 (44.63%), Query Frame = 1
Query: 292 KQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIR-----VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNT-VTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQY-FSVSSK-GQIFLKRPLDFETTSLHLIDVQASDNEF---NANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAA-NGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTY-----EIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNEN--FFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKEL 2376
+++ F +DS + ++ T++ +D E +L+V D S + R V++ V D NDN P F + V E +G + + D + +N + Y + F + + + L K LDYE + Y L I A + + ++ + + V++ ND P+F +++ SV EN+P+ II+V+A D DE ++EITY ++ + +V + G + +PLD E V A D +A++ VVITV DVND P FN + E QP + +T D D ++ + +++ R + + S+ G + + + +E+ ++ + T T+ + I D N+ PIFE A YS S+ E+ PV V+ V+ATD D+G N +TY I+ L S +P F I+ +G + LDRE S Y L + AKD G T+ + I + DVNDN+P F P + I E+ GT V + A+D D G NG++ + L E+ F +G++++ K DRE+ + L D+G PLS T V I + DVND+PP T + IT+ + G + + A D DEG NA H+ I +D + FS+ + G R + EL
Sbjct: 516 QEMPIFRIDSRSGVISTRSSLDRET----------SDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGD---VSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRF---------AITSQNGRGLITIAQSLDYKQEK-------RFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDP----FSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTD--VEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPP-----------------TFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTEL 1180 HSP 2 Score: 189.119 bits (479), Expect = 3.234e-48 Identity = 211/808 (26.11%), Postives = 366/808 (45.30%), Query Frame = 1
Query: 175 AIKENQPGQTRIGKIS----EDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLK-GIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSK----EHNTVTYKLDADIYSDTFMLKVTNDSFP-ILVLKKALDYERCKLYNLAIWAWN---SPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENL---PINSMIIQVEAVDEDEDSEITYRSA----DFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIG----QITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDS--GWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL------TIN---GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDI----FSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++ E QP + + ED P+ M+ ++ R Q S F +DS T ++ T +D EL H + VV D + G +++NV D ND+ PTF S++E VG ++ +A D+D+ K E+ A + D M DS ++ + +LD E Y+L + A + + ++ + S+ ++V++ ND P+F ++ Y V V E+ ++ + + A D D+ + R A + SQ+ S G + L +PLD+E+ + + ++A D + T++++ V+D ND AP+F + + +E EN+ +G ++ +D D E AN +++ +++ F +D +T + + T DREE +V+ P +++ ++ +T+ D+NDN P F Y ++ E+ P V VTATD D + + YEI + + F I S + G +T LD ++E + L + A D G ++ + T++I I D N+ +P F P +FE+ GT V ++ ATD+D G N ++ + L + E+ L +IN G++ + DRETT Y L + D G LS T V I + DVNDN P P Y + SI D + G +++ ASD D G N + +S D DI F IDP G +R + L +E + +++ I D G P + ++ +R++D+
Sbjct: 367 SVLEEQPAGAAVTTVRARDPEDSPVVYSMV-----SLLDSRSQ---SLFKVDSRTGVVTTSASLD-RELMDVH--------YFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGAT-VGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTS----QFQESVLENVPVGYNIIRVQAYDSD-EGANAEIT-----YSISERDDNFPLAVDPRTGW----VQTIKPLDREEQGRFAFQVVAKD---GGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPD--EDSRLHYEI----TTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGG----RSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSL---NEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLY-------------QASILEDALV----GTSVIQVAASDPDVGLNGRIKYLLS---DRDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDV 1106 HSP 3 Score: 171.4 bits (433), Expect = 1.048e-42 Identity = 188/711 (26.44%), Postives = 306/711 (43.04%), Query Frame = 1
Query: 412 LVVNVWDGLS--LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILV--------LKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR-SADFSSQYFSVSS---KGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRD------------SEAANGKLSCWEPRNLYNKQ--AVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNP-LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAK-----EFDRETT-DRYCLQIEINDQGKTPLSITHTVCINILDVNDNPP-----RLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDN 2415
LV+ DG S ++ +NV D NDN P F TS +SV E + VG ++ +A D D +A+I T+ + +D+FP+ V K LD E + + A + + S+ I V ++ND +P F + YE +V E+ P + + V A D DEDS + Y + + F+++S +G I + + LD++ L+ V A+D+ ++T V I + D N+ AP F P + E P + ++ D D E+ NG L +P ++ N Q A++ PLD +T G L T D NP L+ T + + + D+NDN P F+ +Y SI E+ V VI+V A+D D+G NG + Y + + + E FVID SG + LDRE + + L +A DKG+ P SS ++ ++SP K+ ++ EN G+ VG + A D DEG N + + ++ + N F L + A+ E D E+T R+ L + PL + I + DVNDN P ++IF ++ + P EI + A D D + H+RI N+ ++ ++ G L + +L + +++ V D
Sbjct: 657 LVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENV-PVGYNIIRVQAYDSDEGA---------NAEI---TYSISERDDNFPLAVDPRTGWVQTIKPLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDPDEDSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFLLTVAATDSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESING-LGSPDPFSI-NPQTGAIVTNAPLDRETTSGY--LLTVTAKD-------------------GGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSD---RDIEDGSFVIDPTSGTIRTNKGLDRESVAVFHLTAIAVDKGSPP---LSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDPDEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESTRKRFELVVR---AASPPLRNDAHIEILVTDVNDNAPVLRDFQVIFNNFRDHF----------------------PSGEIGRIPAFDADVSDK--LHYRILSGNNANLLRLNSSSGGLVLSPQLNTNVPKFATMEVSVSDG 1298 HSP 4 Score: 101.679 bits (252), Expect = 2.868e-21 Identity = 97/354 (27.40%), Postives = 162/354 (45.76%), Query Frame = 1
Query: 1456 DINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLF---------KLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTP---LSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFE---ILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
++ + +P FE+A+Y S+ E P A V V A D + + V Y + +L +SLF +DS +G VT + LDRE + +VA D P+ T++ + + ++D ND+SP F + + I E G+ V L ATD D G N ++ + L + F + + +G + + DRET+D Y L + D + T +V + +LD NDN P+ + + T+ + + G E + A+D D+G NAA + I N FSID G + + + L E + Y + I +D G PS+ ++ ++LV + D
Sbjct: 351 ELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPE---DSPVVYSMVSLLDSR-SQSLFKVDSRTGVVTTSASLDRELMDVHYFRVVATDDSFPPRSGTTT--LQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQF-----------------SERTYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVID 681
BLAST of Protocadherin gamma vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 248.825 bits (634), Expect = 3.271e-68 Identity = 224/784 (28.57%), Postives = 369/784 (47.07%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVW----DGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NPS--FCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y I+E IG I +D+ +S + + YR + V+ + I T ID E+LCP P+ E + + V D L I+++I V+D NDN P F + I S+ E + + A D D N+V +K + F L + + +P L++++ LD E+ Y + + + + + + + V ++ND P FK+ + EV + EN P+ + ++Q++A D D ++EI Y + + + + F++ ++ G I ++RPLD E T++H + V ASD + A + I V DVND AP +L +P+ + E P N I IT+ D+D++ NGK+ C+ +++ P K Y +Y L T D E T + + K++ + K L T + + + D NDN PIF + V +++ ENN D + ++ATD+D GRN + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT Q S + +TI+D NDNSPKF + + EN + VG++ TD D G+N + +L N NENF +G ++S FDRE Y + D G P S V IN++DVNDN P +I+P + + + S + PG + + A D D G NA + I N +F IDP G + ++ K IG + + + + D G P +H+
Sbjct: 28 YPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCP--GPSFEDSECSFEIEVVILPNDYFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFAIPSATDPDTGP--NSV-HKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDV-NGKVICFIEKDV----------PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASD---SGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQ--SQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSIL-NDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHT 765 HSP 2 Score: 129.028 bits (323), Expect = 8.393e-30 Identity = 162/585 (27.69%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D ++ + Q F + + +G Q+ +++ LD E +++ V+ D N ++T ++ +TV DVND P F + I E P + Q+ D D AN ++ + ++ Q P + F L T R DREET V+ + +P +T+TI++T D+NDN P I +V + E +P++ K+ +T +DKD NG V I+ P V D+ T+ L LD E Y IVA D G QT+ + + + D NDN P F P +L + EN + + ATD D G N +++++L PN +FF L G L +++ FDRE +R+ + D G L V + ILD NDN P+ F H ++ +N L Y + G +D D GENA R+S+ ND + F +DP G+++ +E Y + DNG P + K+ + + D+
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADV-GANAEI-----KYMFGAQV----SPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASD---GSSSPARATITINVT--DVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDV---PFHLKAVYDNQYLLETSAL-LDYEGTKEYIFKIVASDSGKPSLNQTA--LVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPK--FTHNHFQFFVSEN-----------LPKYSTVGV----ITVTDADAGENAVV--RLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDV 667 HSP 3 Score: 119.398 bits (298), Expect = 7.636e-27 Identity = 126/488 (25.82%), Postives = 217/488 (44.47%), Query Frame = 1
Query: 1039 IDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPE-KSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKP--GTEVGILIATDNDEGDNGKLLF---KLLPNHNENFF---YLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEIL--KCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
I+V N++ K+ I V D ND AP F PS I PEN +I ++ G S + L N Q+ +++ L + DRE+ V KV + K +ST + +T+ D+NDN P+F+++ V I EN+PV V+++ ATD D+G N + Y ++P + LF +++ +G +T LDRE+ + ++L ++A D + P + T + + + + ++ I P + +EK T++ ++ +D D NGK++ K +P H + + YL L+++ D E T Y +I +D GK L+ T V + + D NDNPP P I+L++ E+ ++ A+D D G NA +++ PN F +D + G+L R +E + + DNG + ++V I D
Sbjct: 112 IEVVILPNDYFRLIKIKIIVKDTNDNAPMF---PSPV-INISIPENTLINSRFAIPSATDPDTGPNSVHK-YELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQK---SSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFG--AQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYL-----LETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQP-------------------VIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLG-PN-ASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILD 563
BLAST of Protocadherin gamma vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 248.825 bits (634), Expect = 5.090e-68 Identity = 224/784 (28.57%), Postives = 369/784 (47.07%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVW----DGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NPS--FCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y I+E IG I +D+ +S + + YR + V+ + I T ID E+LCP P+ E + + V D L I+++I V+D NDN P F + I S+ E + + A D D N+V +K + F L + + +P L++++ LD E+ Y + + + + + + + V ++ND P FK+ + EV + EN P+ + ++Q++A D D ++EI Y + + + + F++ ++ G I ++RPLD E T++H + V ASD + A + I V DVND AP +L +P+ + E P N I IT+ D+D++ NGK+ C+ +++ P K Y +Y L T D E T + + K++ + K L T + + + D NDN PIF + V +++ ENN D + ++ATD+D GRN + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT Q S + +TI+D NDNSPKF + + EN + VG++ TD D G+N + +L N NENF +G ++S FDRE Y + D G P S V IN++DVNDN P +I+P + + + S + PG + + A D D G NA + I N +F IDP G + ++ K IG + + + + D G P +H+
Sbjct: 28 YPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPG--PSFEDSECSFEIEVVILPNDYFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFAIPSATDPDTGP--NSV-HKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDV-NGKVICFIEKDV----------PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASD---SGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQ--SQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSIL-NDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHT 765 HSP 2 Score: 129.028 bits (323), Expect = 8.220e-30 Identity = 159/585 (27.18%), Postives = 255/585 (43.59%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D ++ + Q F + + +G Q+ +++ LD E +++ V+ D N ++T ++ +TV DVND P F + I E P + Q+ D D AN ++ + ++ Q P + F L T R DREET V+ + +P +T+TI++T D+NDN P I +V + E +P++ K+ +T +DKD NG V I+ + + V D+ T+ L LD E Y IVA D G QT+ + + + D NDN P F P +L + EN + + ATD D G N +++++L PN +FF L G L +++ FDRE +R+ + D G L V + ILD NDN P+ H + + ++ +L Y + G +D D GENA R+S+ ND + F +DP G+++ +E Y + DNG P + K+ + + D+
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADV-GANAEI-----KYMFGAQV----SPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASD---GSSSPARATITINVT--DVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKA---VYDNQYLLETSAL-LDYEGTKEYIFKIVASDSGKPSLNQTA--LVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDADAGENAVV--RLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDV 667 HSP 3 Score: 119.783 bits (299), Expect = 6.644e-27 Identity = 126/488 (25.82%), Postives = 217/488 (44.47%), Query Frame = 1
Query: 1039 IDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPE-KSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKP--GTEVGILIATDNDEGDNGKLLF---KLLPNHNENFF---YLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEIL--KCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
I+V N++ K+ I V D ND AP F PS I PEN +I ++ G S + L N Q+ +++ L + DRE+ V KV + K +ST + +T+ D+NDN P+F+++ V I EN+PV V+++ ATD D+G N + Y ++P + LF +++ +G +T LDRE+ + ++L ++A D + P + T + + + + ++ I P + +EK T++ ++ +D D NGK++ K +P H + + YL L+++ D E T Y +I +D GK L+ T V + + D NDNPP P I+L++ E+ ++ A+D D G NA +++ PN F +D + G+L R +E + + DNG + ++V I D
Sbjct: 112 IEVVILPNDYFRLIKIKIIVKDTNDNAPMF---PSPV-INISIPENTLINSRFAIPSATDPDTGPNSVHK-YELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQK---SSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFG--AQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYL-----LETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQP-------------------VIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLG-PN-ASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILD 563
BLAST of Protocadherin gamma vs. Ensembl Zebrafish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 248.825 bits (634), Expect = 5.090e-68 Identity = 224/784 (28.57%), Postives = 369/784 (47.07%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVW----DGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NPS--FCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y I+E IG I +D+ +S + + YR + V+ + I T ID E+LCP P+ E + + V D L I+++I V+D NDN P F + I S+ E + + A D D N+V +K + F L + + +P L++++ LD E+ Y + + + + + + + V ++ND P FK+ + EV + EN P+ + ++Q++A D D ++EI Y + + + + F++ ++ G I ++RPLD E T++H + V ASD + A + I V DVND AP +L +P+ + E P N I IT+ D+D++ NGK+ C+ +++ P K Y +Y L T D E T + + K++ + K L T + + + D NDN PIF + V +++ ENN D + ++ATD+D GRN + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT Q S + +TI+D NDNSPKF + + EN + VG++ TD D G+N + +L N NENF +G ++S FDRE Y + D G P S V IN++DVNDN P +I+P + + + S + PG + + A D D G NA + I N +F IDP G + ++ K IG + + + + D G P +H+
Sbjct: 28 YPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPG--PSFEDSECSFEIEVVILPNDYFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFAIPSATDPDTGP--NSV-HKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDV-NGKVICFIEKDV----------PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASD---SGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQ--SQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSIL-NDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHT 765 HSP 2 Score: 129.028 bits (323), Expect = 8.220e-30 Identity = 159/585 (27.18%), Postives = 255/585 (43.59%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D ++ + Q F + + +G Q+ +++ LD E +++ V+ D N ++T ++ +TV DVND P F + I E P + Q+ D D AN ++ + ++ Q P + F L T R DREET V+ + +P +T+TI++T D+NDN P I +V + E +P++ K+ +T +DKD NG V I+ + + V D+ T+ L LD E Y IVA D G QT+ + + + D NDN P F P +L + EN + + ATD D G N +++++L PN +FF L G L +++ FDRE +R+ + D G L V + ILD NDN P+ H + + ++ +L Y + G +D D GENA R+S+ ND + F +DP G+++ +E Y + DNG P + K+ + + D+
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADV-GANAEI-----KYMFGAQV----SPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASD---GSSSPARATITINVT--DVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKA---VYDNQYLLETSAL-LDYEGTKEYIFKIVASDSGKPSLNQTA--LVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDADAGENAVV--RLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDV 667 HSP 3 Score: 119.783 bits (299), Expect = 6.644e-27 Identity = 126/488 (25.82%), Postives = 217/488 (44.47%), Query Frame = 1
Query: 1039 IDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPE-KSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKP--GTEVGILIATDNDEGDNGKLLF---KLLPNHNENFF---YLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEIL--KCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
I+V N++ K+ I V D ND AP F PS I PEN +I ++ G S + L N Q+ +++ L + DRE+ V KV + K +ST + +T+ D+NDN P+F+++ V I EN+PV V+++ ATD D+G N + Y ++P + LF +++ +G +T LDRE+ + ++L ++A D + P + T + + + + ++ I P + +EK T++ ++ +D D NGK++ K +P H + + YL L+++ D E T Y +I +D GK L+ T V + + D NDNPP P I+L++ E+ ++ A+D D G NA +++ PN F +D + G+L R +E + + DNG + ++V I D
Sbjct: 112 IEVVILPNDYFRLIKIKIIVKDTNDNAPMF---PSPV-INISIPENTLINSRFAIPSATDPDTGPNSVHK-YELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQK---SSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFG--AQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYL-----LETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQP-------------------VIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLG-PN-ASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILD 563
BLAST of Protocadherin gamma vs. Ensembl Zebrafish
Match: CR847522.1 (pep chromosome:GRCz11:CHR_ALT_CTG6_1_1:4874141:4879379:1 gene:ENSDARG00000111493.1 transcript:ENSDART00000185190.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR847522.1) HSP 1 Score: 249.21 bits (635), Expect = 5.307e-68 Identity = 224/784 (28.57%), Postives = 369/784 (47.07%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVW----DGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NPS--FCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y I+E IG I +D+ +S + + YR + V+ + I T ID E+LCP P+ E + + V D L I+++I V+D NDN P F + I S+ E + + A D D N+V +K + F L + + +P L++++ LD E+ Y + + + + + + + V ++ND P FK+ + EV + EN P+ + ++Q++A D D ++EI Y + + + + F++ ++ G I ++RPLD E T++H + V ASD + A + I V DVND AP +L +P+ + E P N I IT+ D+D++ NGK+ C+ +++ P K Y +Y L T D E T + + K++ + K L T + + + D NDN PIF + V +++ ENN D + ++ATD+D GRN + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT Q S + +TI+D NDNSPKF + + EN + VG++ TD D G+N + +L N NENF +G ++S FDRE Y + D G P S V IN++DVNDN P +I+P + + + S + PG + + A D D G NA + I N +F IDP G + ++ K IG + + + + D G P +H+
Sbjct: 28 YPIREELQENVLIGNIPKDLNISHMNSATGATSNLVYRLVSKAGDTPLLRVMSNTGEIFTTSNRIDREKLCPG--PSFEDSECSFEIEVVILPNDYFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFAIPSATDPDTGP--NSV-HKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDV-NGKVICFIEKDV----------PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASD---SGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQ--SQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVRLSIL-NDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDGDTGMNAELKYTIVSGNVRSLFRIDPVTGNITLEEKPTIADIGLHRLVVNISDLGYPKSLHT 765 HSP 2 Score: 129.798 bits (325), Expect = 4.956e-30 Identity = 161/585 (27.52%), Postives = 255/585 (43.59%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D ++ + Q F + + +G Q+ +++ LD E +++ V+ D N ++T ++ +TV DVND P F + I E P + Q+ D D AN ++ + ++ Q P + F L T R DREET V+ + +P +T+TI++T D+NDN P I +V + E +P++ K+ +T +DKD NG V I+ + + V D+ T+ L LD E Y IVA D G QT+ + + + D NDN P F P +L + EN + + ATD D G N +++++L PN +FF L G L +++ FDRE +R+ + D G L V + ILD NDN P+ F H ++ +N L Y + G +D D GENA R+S+ ND + F +DP G+++ +E Y + DNG P + K+ + + D+
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADV-GANAEI-----KYMFGAQV----SPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASD---GSSSPARATITINVT--DVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKA---VYDNQYLLETSAL-LDYEGTKEYIFKIVASDSGKPSLNQTA--LVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILDENDNSPK--FTHNHFQFFVSEN-----------LPKYSTVGV----ITVTDADAGENAVV--RLSILNDNENFILDPDSGVIKSNVSFDREQQSSYTFDVRAVDNGSPPCSSAAKVTINVIDV 667 HSP 3 Score: 119.783 bits (299), Expect = 6.235e-27 Identity = 126/488 (25.82%), Postives = 217/488 (44.47%), Query Frame = 1
Query: 1039 IDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPE-KSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKP--GTEVGILIATDNDEGDNGKLLF---KLLPNHNENFF---YLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEIL--KCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
I+V N++ K+ I V D ND AP F PS I PEN +I ++ G S + L N Q+ +++ L + DRE+ V KV + K +ST + +T+ D+NDN P+F+++ V I EN+PV V+++ ATD D+G N + Y ++P + LF +++ +G +T LDRE+ + ++L ++A D + P + T + + + + ++ I P + +EK T++ ++ +D D NGK++ K +P H + + YL L+++ D E T Y +I +D GK L+ T V + + D NDNPP P I+L++ E+ ++ A+D D G NA +++ PN F +D + G+L R +E + + DNG + ++V I D
Sbjct: 112 IEVVILPNDYFRLIKIKIIVKDTNDNAPMF---PSPV-INISIPENTLINSRFAIPSATDPDTGPNSVHK-YELLNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKVKVEDGGNPQK---SSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADVGANAEIKYMFG--AQVSPATRRLFALNTTTGLITVQRPLDREETAIHKLTVLASDGSSSPARATITINVTDVNDNAPNIDLRYIISPTNGTVMLSEKDPINTKIALITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYL-----LETSALLDYEGTKEYIFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQP-------------------VIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQLG-PN-ASFFDLDRKTGVLTASRVFDREEQERFLFTVTARDNGTRALQSQAAVIVTILD 563
BLAST of Protocadherin gamma vs. Ensembl Zebrafish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 237.654 bits (605), Expect = 1.950e-64 Identity = 224/809 (27.69%), Postives = 373/809 (46.11%), Query Frame = 1
Query: 97 LLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVL----DSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGL---SLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-------YFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQ------FNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK-SLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
L+ +F CL Q D Y +KE QP RIG + +D+ L+ ++ LS + ++ + L S IL T ID E+LC +G + + + + ++++ ++D+NDN P F ++ I S+ E + + A D D+ + Y+L + F L + D +P L+++++LD E + + I + + + + + V ++ND P FK + EV+V EN P+ + + + A D D S + FS+Q +F++ S+ G I +K+PLD E +H + V ASD + V++ V D+ND P NL + E P N I IT+ DRDS+ NGK++C+ ++ + KP F ++ L T D E T + +++ + K PL ++ + + I D NDN P+F + +SI ENN ++IK++ATD D G N L+ Y S+ P+ F IDS SG ++ +LDREK+ Y ++A+D GT P Q S+ T+ + + D NDNSP F P+ + EN VG++ TD D GDN + ++ N +NF G ++ FDRE Y ++ D G + V IN++DVNDN P + P + Y + ++T SPG + + A D D G NA + I + +F+ID G + ++ K+ G + + + V+D G+P +H+
Sbjct: 10 LVVLFTCL----FLMCRAQEKD---YTVKEEQPENVRIGNLRKDLNLNLDPDIK-LSSALQFKPVYKTGDVPLVKVEASTGEILTTANRIDREKLC-----SGVFNEKRCYYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENT-AINSRYPVPSAFDPDIGI-NGIQHYELVKSVSE--FGLDIIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTHLHATDADLGSNAQIHFS-FSNQISPSTKRHFAIDSTTGLITVKQPLDREVNPVHKLIVLASDGSSTPSRATVIVNVTDINDNVPSIDTRYIMNLVNGTVLLSENAPLNTKIALITVTDRDSDL-NGKVTCYTDHDVPFR----LKP-----VFNDQFLLETAAPLDYETTREYAIRIVASD---SGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIKISATDADSGSNALIIY------SLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQ--SNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGDNAVVTLSII-NGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPSNT--------------SPGSVVTRVFAIDNDTGMNAELQYSIIGGSLRGLFTIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQPESLHA 764 HSP 2 Score: 125.946 bits (315), Expect = 8.572e-29 Identity = 154/581 (26.51%), Postives = 247/581 (42.51%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSKG---QIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I + +IND P F+ +S+ EN INS A D D + E+ ++F Q+ +++ LD ET ++ ++ D N ++T ++ +TV DVND P F + + E P + + D D +N ++ + F +DS T + + DRE + +IV + P +T+ +++T DINDN P I +V + EN P++ K+ +T TD+D NG VT D+ K +F +D + LD E Y + IVA D G P +S + I I D NDN P F P+ +L I EN PGT++ + ATD D G N +++ L P+ + F + +G L K DRE ++Y + D G TPL TV + + D NDN P HP+Y + + +L +Y + G +D D G+NA +S+ N D F IDP+ G+++ +E Y + D G K+ + + D+
Sbjct: 123 VKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAFDPDIGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQSLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTHLHATDADL-GSNAQIHFSFSNQISPSTKRHFA--IDSTTGL----ITVKQPLDRE---VNPVHKLIVLASDGSSTPSRATVIVNVT--DINDNVPSIDTRYIMNLVNGTVLLSENAPLNTKIALITVTDRDSDLNGKVTCYTDHDVPFR-LKPVF---NDQFLLETAAPLDYETTREYAIRIVASDSGKPPLN--TSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIKISATDADSGSNALIIYSLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFT----HPEYNFY---------VPENLPLYGTVGL----ITVTDADAGDNAV--VTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDAGLMQTTSYAKVTINVVDV 666
BLAST of Protocadherin gamma vs. Ensembl Xenopus
Match: vapa (VAMP associated protein A [Source:Xenbase;Acc:XB-GENE-990155]) HSP 1 Score: 254.218 bits (648), Expect = 1.047e-69 Identity = 235/810 (29.01%), Postives = 373/810 (46.05%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSSQYFSVSSK--------GQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T T ID E+LC + E +L +V+ D L I+++I V+D NDN P F ++ I S+ E + + A+D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND +P FK+ + EV + EN PI + ++Q+ A D D ++EI Y F +Q S + + G I ++RPLD E T++H + V A+D A V I V DVND P +L +P + E P N I IT+ D+D++ N K+ C+ R + P K Y +Y L T D E + + K L T + + + D NDN PIF + V +S+ ENN + V+A+D+D G+N + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT P Q S + +T++D NDNSPKF + + EN + VG++ ATD+D G+N + +L N NENF +G ++S FDRE Y ++ D G+ P S T V INI+D NDN P +I P + + + S + PG + + A D D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGSSTSLVYRLVSKAGDSPLVKVSSSTGEIFTTSTRIDREKLCAGSSNSDENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSTVINISIPENTL-INSRFPIPSAVDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNKPVFKESQVEVHIPENAPIGTSVVQLHATDADIGSNAEIKYI---FGAQVTSATKRLFALNNTTGLITVQRPLDREETAVHKLTVLATDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPINTKIALITVSDKDTDV-NSKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYE---GIKEFSFKIVAADTGKPSLNQTALVRVELEDENDNPPIFSQPVIELSVSENNRRGLYLTTVSASDEDSGKNSDIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITATDSDAGENKAVTLSIL-NDNENFVLDPYSGLIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINIMDANDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDTDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPSAADVGLHRLVVNISDLGYPKPLHT 766 HSP 2 Score: 122.865 bits (307), Expect = 1.155e-27 Identity = 157/582 (26.98%), Postives = 254/582 (43.64%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
+ I I V + ND P F +S+ EN INS AVD D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F + ++E PEN IG + ++A G S E + ++ Q L + L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +P++ K+ +T +DKD N V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + A+D D G N ++++L PN +FF L G L +++ FDRE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G A+D D GEN A +S+ ND + F +DP G+++ +E Y + D G+P + + K+ + I D
Sbjct: 126 IKIKIIVKDTNDNAPMFPSTVINISIPENTLINSRFPIPSAVDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNKPVFKES----QVEVHIPENAPIGTSVVQLHATDADIG--SNAEIKYIFGAQVTSATKRLFA--LNNTTGLITVQRPLDREETAVHKLTVLATD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNSKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGIKEFSFKIVAADTGKPSLNQTA--LVRVELEDENDNPPIFSQPVIELSVSENNRRGLYLTTVSASDEDSGKNSDIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITATDSDAGENKAV--TLSILNDNENFVLDPYSGLIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAKVTINIMD 667
BLAST of Protocadherin gamma vs. Ensembl Xenopus
Match: ENSXETT00000047804.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 229.18 bits (583), Expect = 2.111e-61 Identity = 223/810 (27.53%), Postives = 376/810 (46.42%), Query Frame = 1
Query: 103 YIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRN-LSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWA--WNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFN----LNP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK-SLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIG-------PKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGD----YNVQIIVEDNGKPSKMHS 2439
Y+ LI ++ Q + Y ++E P IG + +D+ L+ L L K+ Y+ V ++ I T ID E+LC + V + D + ++++ ++D+NDN P F ++ I S+ E V + AID DV + Y+L +++ + D +P L+++++LD E+ Y + I +PA + L +T V ++ND P FK++ EV++ E+ + + + Q+ A D D +++I + + + + ++F++ ++ G I +K PLD E + H + V ASD + V I + D+ND P + +NP ++ E P N I IT+ D+D++ NGK++C+ ++ + KP D++ + L T D E T + K++ + K PL + + + I D NDN P+F + +S ENNP ++ K++ATD D GRN ++Y + P ++F +D +G +TA KLDREK+ Y ++AKD G P QT++ + ++ SP F P+ L ++ GT VG++ TD D G+N + L+ N +NF + G ++ FDRE Y Q++ D+G S T V I + DVNDN P + P + Y + ST SPG + + A D D G NA + I N +F+I + G + +K KL L GD Y + I V D+GKP H+
Sbjct: 28 YLLAVLIACIVFESGAQEKN---YIVREELPENVLIGNLLKDLNLTLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPD--EVFRLVKIRFLIEDINDNSPLFPSTVINISIPENT-AVNSRYSVPSAIDPDVGV-NGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVT--VTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPYHKLTVLASDGSSTPSRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADL-NGKVTCFTDHDVPFR----LKPVFDNQ-----FLLETAAPLDYESTREYAIKIVASD---SGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSY------MLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGN-PSLQTNTTVTLSVLDQNDN-SPSFTHNEYNFYVPENLPMY-----GT-VGLITVTDADSGENAVVTLSLV-NARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTST--------------SPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKL---LAGDHGVLYKLVIKVNDSGKPEPFHT 783 HSP 2 Score: 148.673 bits (374), Expect = 1.078e-35 Identity = 171/585 (29.23%), Postives = 256/585 (43.76%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDED-SEITYRSADFSSQYFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIG----QITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I + +IND P F +S+ EN +NS A+D D + I + F + + +G Q+ +++ LD E +++ ++ D N ++T ++ +TV DVND P F IE PE+ +G Q+ D D +N K+ + + N F +D+ T + + DREE+ V+ + P +T+TI++T DINDN P I +V + E P++ K+ +T TDKD NG VT D+ P + V D+ TA LD E Y + IVA D G P Q S + I I D NDN+P F P L EN PGTE+ + ATD D G N +L + L PN F G L + ++ DRE DRY + D G L TV +++LD NDN P H +Y + + +L +Y + G +D D GENA +SL N D F IDP G++R +E G Y Q+ D G P K + K+ + ++D+
Sbjct: 141 VKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEK----DIEVNIPEDAAVGTSVTQLHATDADL-GSNAKIHFYFGNQITNLAKRHFA--IDNNTGL----ITVKEPLDREESPYHKLTVLASD---GSSTPSRATVTINIT--DINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDV---PFRLKPVFDNQFLLETAA-PLDYESTREYAIKIVASDSGKPPLNQ--SAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFT----HNEYNFY---------VPENLPMYGTVGL----ITVTDADSGENAV--VTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDV 684
BLAST of Protocadherin gamma vs. Ensembl Xenopus
Match: ENSXETT00000047801.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 229.565 bits (584), Expect = 2.152e-61 Identity = 223/810 (27.53%), Postives = 376/810 (46.42%), Query Frame = 1
Query: 103 YIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRN-LSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWA--WNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFN----LNP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK-SLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIG-------PKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGD----YNVQIIVEDNGKPSKMHS 2439
Y+ LI ++ Q + Y ++E P IG + +D+ L+ L L K+ Y+ V ++ I T ID E+LC + V + D + ++++ ++D+NDN P F ++ I S+ E V + AID DV + Y+L +++ + D +P L+++++LD E+ Y + I +PA + L +T V ++ND P FK++ EV++ E+ + + + Q+ A D D +++I + + + + ++F++ ++ G I +K PLD E + H + V ASD + V I + D+ND P + +NP ++ E P N I IT+ D+D++ NGK++C+ ++ + KP D++ + L T D E T + K++ + K PL + + + I D NDN P+F + +S ENNP ++ K++ATD D GRN ++Y + P ++F +D +G +TA KLDREK+ Y ++AKD G P QT++ + ++ SP F P+ L ++ GT VG++ TD D G+N + L+ N +NF + G ++ FDRE Y Q++ D+G S T V I + DVNDN P + P + Y + ST SPG + + A D D G NA + I N +F+I + G + +K KL L GD Y + I V D+GKP H+
Sbjct: 28 YLLAVLIACIVFESGAQEKN---YIVREELPENVLIGNLLKDLNLTLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPD--EVFRLVKIRFLIEDINDNSPLFPSTVINISIPENT-AVNSRYSVPSAIDPDVGV-NGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVT--VTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPYHKLTVLASDGSSTPSRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADL-NGKVTCFTDHDVPFR----LKPVFDNQ-----FLLETAAPLDYESTREYAIKIVASD---SGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSY------MLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGN-PSLQTNTTVTLSVLDQNDN-SPSFTHNEYNFYVPENLPMY-----GT-VGLITVTDADSGENAVVTLSLV-NARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTST--------------SPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKL---LAGDHGVLYKLVIKVNDSGKPEPFHT 783 HSP 2 Score: 148.673 bits (374), Expect = 1.124e-35 Identity = 171/585 (29.23%), Postives = 256/585 (43.76%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDED-SEITYRSADFSSQYFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIG----QITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I + +IND P F +S+ EN +NS A+D D + I + F + + +G Q+ +++ LD E +++ ++ D N ++T ++ +TV DVND P F IE PE+ +G Q+ D D +N K+ + + N F +D+ T + + DREE+ V+ + P +T+TI++T DINDN P I +V + E P++ K+ +T TDKD NG VT D+ P + V D+ TA LD E Y + IVA D G P Q S + I I D NDN+P F P L EN PGTE+ + ATD D G N +L + L PN F G L + ++ DRE DRY + D G L TV +++LD NDN P H +Y + + +L +Y + G +D D GENA +SL N D F IDP G++R +E G Y Q+ D G P K + K+ + ++D+
Sbjct: 141 VKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEK----DIEVNIPEDAAVGTSVTQLHATDADL-GSNAKIHFYFGNQITNLAKRHFA--IDNNTGL----ITVKEPLDREESPYHKLTVLASD---GSSTPSRATVTINIT--DINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDV---PFRLKPVFDNQFLLETAA-PLDYESTREYAIKIVASDSGKPPLNQ--SAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFT----HNEYNFY---------VPENLPMYGTVGL----ITVTDADSGENAV--VTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDV 684
BLAST of Protocadherin gamma vs. Ensembl Xenopus
Match: ENSXETT00000047798.1 (protocadherin 11 X-linked [Source:NCBI gene;Acc:100493938]) HSP 1 Score: 229.18 bits (583), Expect = 2.453e-61 Identity = 223/821 (27.16%), Postives = 377/821 (45.92%), Query Frame = 1
Query: 70 MKQIKCSLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRN-LSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWA--WNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFN----LNP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK-SLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIG-------PKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGD----YNVQIIVEDNGKPSKMHS 2439
M + + L + C++ F Y ++E P IG + +D+ L+ L L K+ Y+ V ++ I T ID E+LC + V + D + ++++ ++D+NDN P F ++ I S+ E V + AID DV + Y+L +++ + D +P L+++++LD E+ Y + I +PA + L +T V ++ND P FK++ EV++ E+ + + + Q+ A D D +++I + + + + ++F++ ++ G I +K PLD E + H + V ASD + V I + D+ND P + +NP ++ E P N I IT+ D+D++ NGK++C+ ++ + KP D++ + L T D E T + K++ + K PL + + + I D NDN P+F + +S ENNP ++ K++ATD D GRN ++Y + P ++F +D +G +TA KLDREK+ Y ++AKD G P QT++ + ++ SP F P+ L ++ GT VG++ TD D G+N + L+ N +NF + G ++ FDRE Y Q++ D+G S T V I + DVNDN P + P + Y + ST SPG + + A D D G NA + I N +F+I + G + +K KL L GD Y + I V D+GKP H+
Sbjct: 1 MDLLSGTYLLAVLIACIV-------FESGAQEKNYIVREELPENVLIGNLLKDLNLTLDPDLSTPLQFKLVYKTGDVPLIRVEENTGEIFTTSNRIDREKLCSGIFTENKCFYEVEVAVLPD--EVFRLVKIRFLIEDINDNSPLFPSTVINISIPENT-AVNSRYSVPSAIDPDVGV-NGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVT--VTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPYHKLTVLASDGSSTPSRATVTINITDINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADL-NGKVTCFTDHDVPFR----LKPVFDNQ-----FLLETAAPLDYESTREYAIKIVASD---SGKPPLNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSY------MLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGN-PSLQTNTTVTLSVLDQNDN-SPSFTHNEYNFYVPENLPMY-----GT-VGLITVTDADSGENAVVTLSLV-NARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTST--------------SPGSVVARVYAIDNDTGINADLRYSIIGGNSRGLFAIGERSGNITLKEKL---LAGDHGVLYKLVIKVNDSGKPEPFHT 763 HSP 2 Score: 148.288 bits (373), Expect = 1.158e-35 Identity = 171/585 (29.23%), Postives = 256/585 (43.76%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDED-SEITYRSADFSSQYFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIG----QITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I + +IND P F +S+ EN +NS A+D D + I + F + + +G Q+ +++ LD E +++ ++ D N ++T ++ +TV DVND P F IE PE+ +G Q+ D D +N K+ + + N F +D+ T + + DREE+ V+ + P +T+TI++T DINDN P I +V + E P++ K+ +T TDKD NG VT D+ P + V D+ TA LD E Y + IVA D G P Q S + I I D NDN+P F P L EN PGTE+ + ATD D G N +L + L PN F G L + ++ DRE DRY + D G L TV +++LD NDN P H +Y + + +L +Y + G +D D GENA +SL N D F IDP G++R +E G Y Q+ D G P K + K+ + ++D+
Sbjct: 121 VKIRFLIEDINDNSPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGVNGIQHYELLKGQNVFGLDVIETPEGDKWPQLIVQQSLDREQKDTYVMKIKVEDGGNPARSSTAILQVTVTDVNDNRPVFKEK----DIEVNIPEDAAVGTSVTQLHATDADL-GSNAKIHFYFGNQITNLAKRHFA--IDNNTGL----ITVKEPLDREESPYHKLTVLASD---GSSTPSRATVTINIT--DINDNIPSIDTRYIINPVNGTVQLSEKAPLNTKIALITVTDKDADLNGKVTCFTDHDV---PFRLKPVFDNQFLLETAA-PLDYESTREYAIKIVASDSGKPPLNQ--SAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYMLGPNAPTIFNLDRRTGILTAVRKLDREKQDRYTFTVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFT----HNEYNFY---------VPENLPMYGTVGL----ITVTDADSGENAV--VTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDKGSPQKSSTVKVTIFVEDV 664
BLAST of Protocadherin gamma vs. Ensembl Xenopus
Match: pcdh17 (protocadherin 17 [Source:Xenbase;Acc:XB-GENE-480220]) HSP 1 Score: 227.254 bits (578), Expect = 1.162e-60 Identity = 232/830 (27.95%), Postives = 374/830 (45.06%), Query Frame = 1
Query: 67 TMKQIKCSLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDV--PLSTQMILRNLSEKINYRFQKQLSYFVLDSNTS-ILKTKTLIDLEEL--CPDHCPTGEMGQLYLVVNVWDGLS-LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYS-DTFMLKVTNDS---FPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITY---RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN---ANTKVVITVVDVNDEAP-----QFNL---NPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDIL 2472
MK+ + FL FQ I + Y + E QP IG ++ D P S + Y+ + Y +D T I T+T ID E L C + P GE L V++ D +S + ++ +I + D+NDN P F + I S+ E +G + A DRD S + +Y+L + D F L+V D P L++ LD E+ Y+L I + + + + I +++ ND PKF++ YE + EN P+ ++QV+A D D+ ++EI Y +++D + + S G I ++ P+D E V A D N A T+V IT+ D ND P F L I E P + + + D D E N ++C ++ + + DSK KY L T D E + +++ V + PL+ST ++ + + D+NDN P+F +++ V ENN ++ V++V+ATD D G N + Y I S + +F I+ DSG + LDRE+ Y +VA DKG + T+S IT++D NDN PKF + + EN + VG++ D D+G+N + + P E F G++ S+ FDRE Y +++ D G P S V IN+LD NDN P ++ P + Y ++ T PG + A D+D G NA + I+ N ++F I G + +++ + ++ G + + + V D GKPS+ + + I + L
Sbjct: 44 AMKRTATACFLWLFFQLPI--------LGSSTKVAYRVPEEQPPNILIGSLASDYGYPDSKHL----------YKLELGHPYLRVDGKTGDIYTTETSIDRESLRECQNLEP-GEKCFLEFEVSMTDLMSPVPRLLDGQIEIMDINDNTPNFNSPVITLSIPENT-NIGMLFPIPAATDRD-SGVNGVSSYELIVGPEAQDLFGLQVAEDQDEKQPQLIVMGMLDREQRDSYDLTIKVQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEIRGFGLVTHQGGVANISEDVPVETPVALVQVSDID-EGVNAAVTCVVAGDVPFQLKQVSDTGSDSKK---KYFLQTTTALDYESVKEYTIEIVAVD---SGNPPLSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSILPDPSA---RGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDKGIPSLKGTASV--VITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDADKGENAHIHLSVEPESGE-FVIQNGTGTILSSISFDREHQSTYTFRLKAVDGGDPPRSSYVGVTINVLDENDNAPVIVVPS-NISYKYLTPQT--------------HPGTPVNWVRAEDMDTGINAELDYSIASGNPFELFQISHNNGEVTLEKAIIRKHYGLHRLVVKVTDKGKPSRHGTALVHFYINETL 824
BLAST of Protocadherin gamma vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 253.447 bits (646), Expect = 2.167e-70 Identity = 234/807 (29.00%), Postives = 375/807 (46.47%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ +RE++ + + A+D GT P Q S + +T++D NDNSPKF + + EN + VG++ TD D G+N + +L N NENF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSIL-NDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHT 766 HSP 2 Score: 127.102 bits (318), Expect = 2.685e-29 Identity = 160/585 (27.35%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ F+RE +R+ + D G PL V + +LD NDN P+ F H ++ +N L Y + G +D D GEN A +S+ ND + F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPK--FTHNHFQFFVSEN-----------LPKYSTVGV----ITVTDEDAGENKAV--TLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 253.832 bits (647), Expect = 3.448e-69 Identity = 235/808 (29.08%), Postives = 375/808 (46.41%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ +RE++ + + A+D GT P Q S + +T++D NDNSPKF + F EN + VG++ TD D G+N + +L N NENF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSIL-NDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHT 766 HSP 2 Score: 127.872 bits (320), Expect = 2.447e-29 Identity = 158/585 (27.01%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ F+RE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GEN A +S+ ND + F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDEDAGENKAV--TLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 253.832 bits (647), Expect = 4.179e-69 Identity = 235/808 (29.08%), Postives = 375/808 (46.41%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ +RE++ + + A+D GT P Q S + +T++D NDNSPKF + F EN + VG++ TD D G+N + +L N NENF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSIL-NDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHT 766 HSP 2 Score: 127.872 bits (320), Expect = 2.888e-29 Identity = 158/585 (27.01%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ F+RE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GEN A +S+ ND + F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDEDAGENKAV--TLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 253.832 bits (647), Expect = 4.179e-69 Identity = 235/808 (29.08%), Postives = 375/808 (46.41%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ +RE++ + + A+D GT P Q S + +T++D NDNSPKF + F EN + VG++ TD D G+N + +L N NENF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSIL-NDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHT 766 HSP 2 Score: 127.872 bits (320), Expect = 2.888e-29 Identity = 158/585 (27.01%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ F+RE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GEN A +S+ ND + F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDEDAGENKAV--TLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. Ensembl Mouse
Match: Pcdh9 (protocadherin 9 [Source:MGI Symbol;Acc:MGI:1306801]) HSP 1 Score: 253.447 bits (646), Expect = 4.596e-69 Identity = 235/808 (29.08%), Postives = 375/808 (46.41%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ +RE++ + + A+D GT P Q S + +T++D NDNSPKF + F EN + VG++ TD D G+N + +L N NENF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVITVTDEDAGENKAVTLSIL-NDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKALHT 766 HSP 2 Score: 127.487 bits (319), Expect = 3.711e-29 Identity = 158/585 (27.01%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ F+RE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GEN A +S+ ND + F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFNREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDEDAGENKAV--TLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. UniProt/SwissProt
Match: sp|Q9HC56|PCDH9_HUMAN (Protocadherin-9 OS=Homo sapiens OX=9606 GN=PCDH9 PE=1 SV=2) HSP 1 Score: 253.832 bits (647), Expect = 2.347e-68 Identity = 235/808 (29.08%), Postives = 375/808 (46.41%), Query Frame = 1
Query: 100 LYIFQCLIN-LRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGE---MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVT-YKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y+ LI LRL Q ++I Y I+E P IG I +D+ +S S + YR + V S I T ID E+LC E +L +V+ D L I+++I V+D NDN P F + I S+ E + + A D D N V Y+L ++ + + +P L++++ LD E+ Y + I + + + + + V ++ND P FK+ + EV + EN P+ + +IQ+ A D D ++EI Y + A + + F+++ + G I ++R LD E T++H + V ASD A V I V DVND P +L +P + E P N I IT+ D+D++ NGK+ C+ R + P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +S+ ENN + ++ATD+D G+N + Y+ + P S F +D +G +TA+ DRE++ + + A+D GT P Q S + +T++D NDNSPKF + F EN + VG++ TD D G+N + +L N N+NF +G ++S FDRE Y ++ D G+ P S T V IN++DVNDN P +I P + + + S + PG + + A D+D G NA + I N+ +F IDP G + ++ K +G + + + + D G P +H+
Sbjct: 6 FYLLAALIACLRLDSAIAQ--ELI-YTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRL---IKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFPIPSATDPDTG--FNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEREV----------PFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASD---SGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQ------LGPNASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQ--SQAAVIVTVLDENDNSPKFTH-NHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSIL-NDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDVDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHT 766 HSP 2 Score: 132.494 bits (332), Expect = 6.429e-30 Identity = 160/585 (27.35%), Postives = 254/585 (43.42%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSK---GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D + E+ + F Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F ++E PEN +G I ++A G S E R ++ Q P + F L T R DREET V+ + P +T+TI++T D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ R + P V D+ T++L LD E + IVA D G QT+ + + + D NDN P F P +L + EN + G + + ATD D G N ++++L PN +FF L G L +++ FDRE +R+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GEN A +S+ ND D F +DP G+++ +E Y + D G+P + + K+ + + D+
Sbjct: 126 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEG----QVEVHIPENAPVGTSVIQLHATDADIG--SNAEIRYIFGAQVA----PATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASD---GSSTPARATVTINVT--DVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIE--REV-PFHLKAVYDNQYLLETSSL-LDYEGTKEFSFKIVASDSGKPSLNQTA--LVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPN--ASFFDLDRKTGVLTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDADAGENKAV--TLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDV 668
BLAST of Protocadherin gamma vs. UniProt/SwissProt
Match: sp|Q9BZA8|PC11Y_HUMAN (Protocadherin-11 Y-linked OS=Homo sapiens OX=9606 GN=PCDH11Y PE=1 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 1.544e-66 Identity = 234/815 (28.71%), Postives = 378/815 (46.38%), Query Frame = 1
Query: 82 KCSLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLS---TQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCP-----DHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSS----QYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEF-NANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKIL 2451
KC L YIF L+ +++ Q + Y I+E P IG + +D+ LS + + + K+ Y+ + + I T ID E+LC +HC Y V + ++++ ++D+NDN P F + I S+ E + L A+D DV + Y+L +I+ + D P L+++K LD E Y + + + + + + + V + ND P FK+ + EVS+ EN P+ + + Q+ A D D E+++I + ++ S + F + ++ G I +K PLD E T H + V ASD A V++ V DVND P ++ NP + E P N I IT+ D+D++ NG+++C+ + + +P F ++ L D E T + K++ A K PL + + + + D NDN P+F ++ +VSI ENN +++KV+ATD D G N + Y + PE F +D +G +T KLDREKE Y I+AKD G P TS+ T+ ++IID NDNSP F + K + EN VG++ TD D GDN + +L + N++F + G ++ FDRE + Y ++ D G+ S + V IN++DVNDN P I P Y+ Y + ST +PG + + A D D G NA + I N D+F+ID + G + + K +G + V + D G+P + S I+
Sbjct: 33 KCLLSGTYIFAVLLVCVVFHSGAQEKN---YTIREEIPENVLIGNLLKDLNLSLIPNKSLTTTMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHC-------FYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPEN-SAINSKYTLPAAVDPDVGI-NGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH-NGRVTCFTDHEIPFR----LRP-----VFSNQFLLENAAYLDYESTKEYAIKLLAAD---AGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLG--PDAPPE---FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPP--LTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-DENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST--------------NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIV 800 HSP 2 Score: 146.747 bits (369), Expect = 3.034e-34 Identity = 105/359 (29.25%), Postives = 176/359 (49.03%), Query Frame = 1
Query: 1423 TSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GP--KKLEIFENEKPGTEVGILIATDNDEGDNGKLL--------FKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
+ST + +++ D NDN P+F++ VSI EN PV V ++ ATD DIG N + + NL S N + LF +++ +G +T LDRE+ ++L+++A D G MP + + +V ++I P + + EN T++ ++ TD D NG++ F+L P + F L++A D E+T Y +++ D GK PL+ + + I + D NDN P +F + +T+ + SPG +++K A+D D G NA ++ + P+ P FS+D + G+L V +KL +E Y I+ +DNG P + + V I D
Sbjct: 262 SSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFL-------LENAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAP--VF---------------TQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLG-PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIID 594 HSP 3 Score: 122.479 bits (306), Expect = 8.214e-27 Identity = 152/581 (26.16%), Postives = 241/581 (41.48%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSKG---QIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVI---TVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I + +IND P F +S+ EN INS AVD D ++ E+ F Q+ +++ LD E +++ V+ D F + I +V D ND P F I E P + Q+ D D N K+ + N +F L++ T + + DREET + V+ + + + + + + D+NDN P I +V + EN P++ K+ +T TDKD NG VT D+ L + S+ + LD E Y + ++A D G P Q S + I + D NDN+P F + I EN PG ++ + ATD D G N ++ + L P+ F G L K+ DRE D+Y I D G PL+ TV ++I+D NDN P +Y K+ +N L + + G +D D G+N+A +S+ ++ D F+ID Q G++R +E Y + ED G+ S+ S K+ + + D+
Sbjct: 155 VKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADI-GENAKIHFSFSNLVSNIARRLFH--LNATTGL----ITIKEPLDREETPNHKLLVL-----ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFR----LRPVFSNQFLLENAAYLDYESTKEYAIKLLAADAGKPPLNQ--SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEY--KFYVPEN-----------LPRHGTVGL----ITVTDPDYGDNSA--VTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDV 698
BLAST of Protocadherin gamma vs. UniProt/SwissProt
Match: sp|Q6WYY1|PC11X_PANPA (Protocadherin-11 X-linked OS=Pan paniscus OX=9597 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.365e-64 Identity = 230/808 (28.47%), Postives = 373/808 (46.16%), Query Frame = 1
Query: 103 YIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLS---TQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCP-----DHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSS----QYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEF-NANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKIL 2451
YIF L+ +++ Q + Y I+E P IG + +D+ LS + + + K+ Y+ + + I T ID E+LC +HC Y V + ++++ ++D+NDN P F + I S+ E + L A+D DV + Y+L +I+ + D P L+++K LD E Y + + + + + + + V + ND P FK+ + EVS+ EN P+ + + Q+ A D D E+++I + ++ S + F + ++ G I +K PLD E T H + V ASD A V++ V DVND P ++ NP + E P N I IT+ D+D++ NG+++C+ + + +P F ++ L T D E T + K++ A K PL + + + + D NDN P+F ++ +VSI ENN ++ KV+ATD D G N + Y + PE F +D +G +T KLDREKE Y I+AKD G P TS+ T+ ++IID NDNSP F + + EN VG++ TD D GDN + +L + N++F + G ++ FDRE + Y ++ D G+ S + V IN++DVNDN P I P + Y + ST +PG + + A D D G NA + I N D+F+ID + G + + K +G + V + D G+P + S I+
Sbjct: 8 YIFAVLLACVVFHSGAQEKN---YTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHC-------FYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPEN-SAINSKYTLPAAVDPDVGT-NGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH-NGRVTCFTDHEIPFR----LRP-----VFSNQFLLETAAYLDYESTKEYAIKLLAAD---AGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLG--PDAPPE---FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPP--LTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-DENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST--------------NPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIV 768 HSP 2 Score: 145.206 bits (365), Expect = 7.694e-34 Identity = 105/359 (29.25%), Postives = 175/359 (48.75%), Query Frame = 1
Query: 1423 TSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GP--KKLEIFENEKPGTEVGILIATDNDEGDNGKLL--------FKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
+ST + +++ D NDN P+F++ VSI EN PV V ++ ATD DIG N + + NL S N + LF +++ +G +T LDRE+ ++L+++A D G MP + + +V ++I P + + EN T++ ++ TD D NG++ F+L P + F L++A D E+T Y +++ D GK PL+ + + I + D NDN P +F + +T+ + SPG ++ K A+D D G NA ++ + P+ P FS+D + G+L V +KL +E Y I+ +DNG P + + V I D
Sbjct: 230 SSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFL-------LETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAP--VF---------------TQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLG-PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIID 562 HSP 3 Score: 123.635 bits (309), Expect = 4.025e-27 Identity = 154/581 (26.51%), Postives = 245/581 (42.17%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVI---TVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I + +IND P F +S+ EN INS AVD D + SQ F + + +G Q+ +++ LD E +++ V+ D F + I +V D ND P F I E P + Q+ D D N K+ + N +F L++ T + + DREET + V+ + + + + + + D+NDN P I +V + EN P++ K+ +T TDKD NG VT D+ L + S+ + LD E Y + ++A D G P Q S + I + D NDN+P F + I EN PG ++ + ATD D G N ++ + L P+ F G L K+ DRE D+Y I D G PL+ TV ++I+D NDN P +F H +Y + + + T+ L +D D G+N+A +S+ ++ D F+ID Q G++R +E Y + ED G+ S+ S K+ + + D+
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADI-GENAKIHFSFSNLVSNIARRLFH--LNATTGL----ITIKEPLDREETPNHKLLVL-----ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFR----LRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQ--SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP--VF--THNEYNFYVPENLPRHG-TVGL------------ITVTDPDYGDNSA--VTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDV 666
BLAST of Protocadherin gamma vs. UniProt/SwissProt
Match: sp|Q71M42|PC11X_PANTR (Protocadherin-11 X-linked OS=Pan troglodytes OX=9598 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.493e-64 Identity = 230/808 (28.47%), Postives = 373/808 (46.16%), Query Frame = 1
Query: 103 YIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLS---TQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCP-----DHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSS----QYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEF-NANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKIL 2451
YIF L+ +++ Q + Y I+E P IG + +D+ LS + + + K+ Y+ + + I T ID E+LC +HC Y V + ++++ ++D+NDN P F + I S+ E + L A+D DV + Y+L +I+ + D P L+++K LD E Y + + + + + + + V + ND P FK+ + EVS+ EN P+ + + Q+ A D D E+++I + ++ S + F + ++ G I +K PLD E T H + V ASD A V++ V DVND P ++ NP + E P N I IT+ D+D++ NG+++C+ + + +P F ++ L T D E T + K++ A K PL + + + + D NDN P+F ++ +VSI ENN ++ KV+ATD D G N + Y + PE F +D +G +T KLDREKE Y I+AKD G P TS+ T+ ++IID NDNSP F + + EN VG++ TD D GDN + +L + N++F + G ++ FDRE + Y ++ D G+ S + V IN++DVNDN P I P + Y + ST +PG + + A D D G NA + I N D+F+ID + G + + K +G + V + D G+P + S I+
Sbjct: 8 YIFAVLLACVVFHSGAQEKN---YTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLIRIEEDTGEIFTTGARIDREKLCAGIPRDEHC-------FYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPEN-SAINSKYTLPAAVDPDVGT-NGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADH-NGRVTCFTDHEIPFR----LRP-----VFSNQFLLETAAYLDYESTKEYAIKLLAAD---AGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLG--PDAPPE---FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPP--LTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-DENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST--------------NPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIV 768 HSP 2 Score: 145.206 bits (365), Expect = 8.031e-34 Identity = 105/359 (29.25%), Postives = 175/359 (48.75%), Query Frame = 1
Query: 1423 TSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GP--KKLEIFENEKPGTEVGILIATDNDEGDNGKLL--------FKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
+ST + +++ D NDN P+F++ VSI EN PV V ++ ATD DIG N + + NL S N + LF +++ +G +T LDRE+ ++L+++A D G MP + + +V ++I P + + EN T++ ++ TD D NG++ F+L P + F L++A D E+T Y +++ D GK PL+ + + I + D NDN P +F + +T+ + SPG ++ K A+D D G NA ++ + P+ P FS+D + G+L V +KL +E Y I+ +DNG P + + V I D
Sbjct: 230 SSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFL-------LETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAP--VF---------------TQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLG-PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIID 562 HSP 3 Score: 123.635 bits (309), Expect = 4.421e-27 Identity = 154/581 (26.51%), Postives = 245/581 (42.17%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVI---TVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I + +IND P F +S+ EN INS AVD D + SQ F + + +G Q+ +++ LD E +++ V+ D F + I +V D ND P F I E P + Q+ D D N K+ + N +F L++ T + + DREET + V+ + + + + + + D+NDN P I +V + EN P++ K+ +T TDKD NG VT D+ L + S+ + LD E Y + ++A D G P Q S + I + D NDN+P F + I EN PG ++ + ATD D G N ++ + L P+ F G L K+ DRE D+Y I D G PL+ TV ++I+D NDN P +F H +Y + + + T+ L +D D G+N+A +S+ ++ D F+ID Q G++R +E Y + ED G+ S+ S K+ + + D+
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGTNGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADI-GENAKIHFSFSNLVSNIARRLFH--LNATTGL----ITIKEPLDREETPNHKLLVL-----ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPVNDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFR----LRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQ--SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP--VF--THNEYNFYVPENLPRHG-TVGL------------ITVTDPDYGDNSA--VTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDV 666
BLAST of Protocadherin gamma vs. UniProt/SwissProt
Match: sp|Q6WXV7|PC11X_PONPY (Protocadherin-11 X-linked OS=Pongo pygmaeus OX=9600 GN=PCDH11X PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.699e-64 Identity = 230/808 (28.47%), Postives = 373/808 (46.16%), Query Frame = 1
Query: 103 YIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLS---TQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCP-----DHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL--DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSS----QYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEF-NANTKVVITVVDVNDEAPQFNL----NP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKIL 2451
YIF L+ +++ Q + Y I+E P IG + +D+ LS + + + K+ Y+ + + I T ID E+LC +HC Y V + ++++ ++D+NDN P F + I S+ E + L A+D DV + Y+L +I+ + D P L+++K LD E Y + + + + + + + V + ND P FK+ + EVS+ EN P+ + + Q+ A D D E+++I + ++ S + F + ++ G I +K PLD E T H + V ASD A V++ V DVND P ++ NP + E P N I IT+ D+D++ NG+++C+ + + +P F ++ L T D E T + K++ A K PL + + + + D NDN P+F ++ +VSI ENN ++ KV+ATD D G N + Y + PE F +D +G +T KLDREKE Y I+AKD G P TS+ T+ ++IID NDNSP F + + EN VG++ TD D GDN + +L + N++F + G ++ FDRE + Y ++ D G+ S + V IN++DVNDN P I P + Y + ST +PG + + A D D G NA + I N D+F+ID + G + + K +G + V + D G+P + S I+
Sbjct: 8 YIFAVLLACVVFHSGAQEKN---YTIREEMPENVLIGDLLKDLNLSLIPNKSLTTAMQFKLVYKTGDVPLTRIEEDTGEIFTTGARIDREKLCAGIPRDEHC-------FYEVEVAILPDEIFRLVKIRFLIEDINDNAPLFPATVINISIPEN-SAINSKYTLPAAVDPDVGI-NGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPINDTVVLSENIPLNTKIALITVTDKDADH-NGRVTCFTDHEIPFR----LRP-----VFSNQFLLETAAYLDYESTKEYAIKLLAAD---AGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLG--PDAPPE---FSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPP--LTSNVTVFVSIIDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSIL-DENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST--------------NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDLGLHRVLVKANDLGQPDSLFSVVIV 768 HSP 2 Score: 145.206 bits (365), Expect = 7.760e-34 Identity = 105/359 (29.25%), Postives = 175/359 (48.75%), Query Frame = 1
Query: 1423 TSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GP--KKLEIFENEKPGTEVGILIATDNDEGDNGKLL--------FKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
+ST + +++ D NDN P+F++ VSI EN PV V ++ ATD DIG N + + NL S N + LF +++ +G +T LDRE+ ++L+++A D G MP + + +V ++I P + + EN T++ ++ TD D NG++ F+L P + F L++A D E+T Y +++ D GK PL+ + + I + D NDN P +F + +T+ + SPG ++ K A+D D G NA ++ + P+ P FS+D + G+L V +KL +E Y I+ +DNG P + + V I D
Sbjct: 230 SSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGENAKIHFSFSNLVS-NIARRLFHLNATTGLITIKEPLDREETPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPINDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFRLRPVFSNQFL-------LETAAYLDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAP--VF---------------TQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLG-PDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIID 562 HSP 3 Score: 122.479 bits (306), Expect = 8.034e-27 Identity = 152/581 (26.16%), Postives = 242/581 (41.65%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSKG---QIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVI---TVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I + +IND P F +S+ EN INS AVD D ++ E+ F Q+ +++ LD E +++ V+ D F + I +V D ND P F I E P + Q+ D D N K+ + N +F L++ T + + DREET + V+ + + + + + + D+NDN P I +V + EN P++ K+ +T TDKD NG VT D+ L + S+ + LD E Y + ++A D G P Q S + I + D NDN+P F + I EN PG ++ + ATD D G N ++ + L P+ F G L K+ DRE D+Y I D G PL+ TV ++I+D NDN P +F H +Y + + + T+ L +D D G+N+A +S+ ++ D F+ID Q G++R +E Y + ED G+ S+ S K+ + + D+
Sbjct: 123 VKIRFLIEDINDNAPLFPATVINISIPENSAINSKYTLPAAVDPDVGINGVQNYELIKSQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADI-GENAKIHFSFSNLVSNIARRLFH--LNATTGL----ITIKEPLDREETPNHKLLVL-----ASDGGLMPARAMVLVNVTDVNDNVPSIDIRYIVNPINDTVVLSENIPLNTKIALITVTDKDADHNGRVTCFTDHEIPFR----LRPVFSNQFLLETAAYLDYESTKEYAIKLLAADAGKPPLNQ--SAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLTKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSP--VF--THNEYNFYVPENLPRHG-TVGL------------ITVTDPDYGDNSA--VTLSILDENDDFTIDSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDV 666
BLAST of Protocadherin gamma vs. TrEMBL
Match: A0A4S2KYT3 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_010451 PE=4 SV=1) HSP 1 Score: 443.351 bits (1139), Expect = 1.943e-132 Identity = 331/963 (34.37%), Postives = 476/963 (49.43%), Query Frame = 1
Query: 88 SLFLLYIFQCLINLRLYYG--FTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQ--------MILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTG-EMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTF---LTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL-----DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKT--------------KLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIF---------KPP--------LDSKT-----FYGKYDLYTRVRFDREETXXXXXX----------XXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPK-------------QQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLL--------PNHNENF-------FYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKT-PLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQK-----ESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDP-----------DIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD-------ILRLEERSKRQKSEHWTKSNKFQX---XXXXXXXXXXXXXXXXXTVLCIIKPC 2616
S L+Y+ +L G + I+YAIKENQP RIGK+ ED+ + + +I + YR ++ +YF L +TS L TK IDLE LCP C G QL L V VW +I VE+ + DV+DN P F L+ + +KEVIY GK +EL KAID+D+ E+ + Y+L D+ DTF L NDS +LVL+K LDYER + Y + A +SP ++ +L I + V+NIND+EP F Q Y V + E+ I + + ++A D D +S I Y S + S+ F V + G++ L LDFE + + +ASD EF A T++ ITV DVNDE P+F NP ++EE QP +GQ+ I DRDS NG+++C EP L +Q ++F PP +DS Y ++ LYTR+ FDRE + + + AA P TST+TI LT+ D NDN P FEK Y ++EN PV KVI+V A D D + Y + LR+ S F ++S++GW+ + +DRE ++ YQL ++A D G +P+ Q T++ + I I+D NDN+P+F GP++ + EN+ P +G L D DEG N + F + N+ F LT NGSL + + DRE YC ++ + D+ + PLS T T+C+ +LD+NDN P+ F + ++N T K IT+ L+ E+PG+ L EA D DEG NA + I D D F +D Q G L + R L IG Y + ++VED G PS + I + I+D + ERS +N+ I +S SA L + IS +LC+IKPC
Sbjct: 2 SKLLMYLLVLGSASQLISGDLLSAVQHRIRYAIKENQPENLRIGKLDEDLLQTPENENSELFSLIQSTKRSTLKYRLREPSNYFRLHESTSELSTKLSIDLEALCPRFCREGLSAAQLNLFVAVWYEERPFSVIHVEVTILDVDDNSPQFPSTLSRPYVLQLKEVIYKAGKQVELPKAIDKDIQPENAEIQYRLQSHLDDSSHALDTFHLVTRNDSRVMLVLQKDLDYERVQQYRFYLVA-SSPVSEERRPFGYVLGPQSAFHDQLEIQVDVLNINDIEPVFSQSLYTVEIPEDTKIGTTVHVLQATDRDANSTIEY-SLENSNDLFQVQADGKVILTNKLDFEKRNKYTFTARASDGEFYALTRLDITVTDVNDEPPEFVTNPPILKVEENQPSQTSVGQLLIVDRDSPEVNGRVTCHEPPTLAGRQPLLFFPETSSALPMPPGISLDGAIIDSSANPEHHVYQRFGLYTRMEFDRESDSNKHRSLIICTDGQDVLTSHTSTTAAIQPRTSTLTIMLTVTDQNDNAPFFEKTHYEAELQENCPVGTKVIQVHANDADSETHAKPQYHL--LRNAL-FTSPFDVESETGWIITSADIDRETQALYQLTVLAID-GHLPRTNHRNGQTNFRGQQHTATTHVQIKILDDNDNAPEFRGPRQFAVEENQAPSKWIGDLQVLDRDEGINRDVEFSMANLQSTAASEEQNKTFRVRSIAPIKLTNNGSLYTTEVLDREVQAHYCFEVAVKDKSPSKPLSSTDTICVRVLDINDNTPK--FVNIRGMSQDLNNRTDAKALEDLRDITVSLTFREAPGYCALIAEAEDSDEGRNALLRYTIKFDGDAMKPESVSHTPLDAFMMDTQSGRLMLTRTLSGNEIGAYPLTLVVEDGGIPSLKSEKDIYIIIEDGPPRGNWLFPESERSIASSVSAKDGNNEAHTILVVIGLSGVSAFLAAVLISAILCMIKPC 956
BLAST of Protocadherin gamma vs. TrEMBL
Match: A0A3R7CGZ3 (Protocadherin Fat 4 OS=Clonorchis sinensis OX=79923 GN=Fat4 PE=4 SV=1) HSP 1 Score: 440.654 bits (1132), Expect = 2.239e-131 Identity = 324/935 (34.65%), Postives = 471/935 (50.37%), Query Frame = 1
Query: 166 IKYAIKENQPGQTRIGKISEDVPLSTQ--------MILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTG-EMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTF---LTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL-----DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKT--------------KLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIF---------KPP--------LDSKT-----FYGKYDLYTRVRFDREETXXXXXX----------XXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMP-------------KQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKL--LPN------HNENF-------FYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKT-PLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQK-----ESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDP-----------DIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD-------ILRLEER---SKRQKSEHWTKSNKFQXXXXXXXXXXXXXXXXXXTVLCIIKPC 2616
I+YAIKENQP RIGK+ ED+ + + +I + YR ++ +YF L +TS L TK IDLE LCP C G QL L V VW +I VE+ + DV+DN P F ++ + +KEVIY GK +EL KAID+D+ E+ + Y+L D+ DTF L NDS +LVL+K LDYER + Y + A +SP ++ +L I + V+NIND+EP F Q Y V + E+ I + + ++A D D +S I Y S + S+ F V + G++ L LDFE + + +ASD EF A T++ ITV DVNDE P+F NP ++EE QP +GQ+ I DRDS NG+++C EP L +Q ++F PP +DS Y ++ LYTRV FDRE + + + A P TST+TI LT+ D NDN P FEK Y ++EN PV KV++V A D D + Y + LR+ S F ++S++GW+ + +DRE ++ YQL ++A D G +P +Q T++ + I I+D NDN+P+F GP++ + EN+ P +G L D DEG N + F + LP+ N+ F LT NGSL + + DRE YC ++ + D+ + PLS T T+C+ +LD+NDN P+ + + ++N T K IT+ L+ E+PG+ L EA D DEG NA + I D D F +D Q G L + R L +G Y + ++VED G PS + I + I+D + ER S E +++ + I +S SA L + IS +LC+IKPC
Sbjct: 30 IRYAIKENQPENLRIGKLDEDLLQTPENENSELFSLIQSTKRSTLKYRLREPSNYFRLHESTSELSTKVSIDLEALCPRFCRDGLSAAQLNLFVAVWYEERPFSVIHVEVTILDVDDNSPQFPPTISRPYVLQLKEVIYKAGKQVELPKAIDKDIQPENAEIQYRLQSHLDDSSHALDTFHLVTRNDSRVMLVLQKDLDYERVQQYRFYLVA-SSPVSEERRPFGYVLDPQSAFHDQLEIQVDVLNINDIEPVFSQSIYNVEIPEDAKIGTTVHVLQATDRDANSTIEY-SLENSNDLFKVQADGKVILINKLDFEKRNKYTFTARASDGEFYALTRLDITVTDVNDEPPEFVTNPPILKVEENQPSQTSVGQLLIVDRDSPEVNGRVTCHEPPTLAGRQPLLFFPETSNALPMPPGISLDGAIIDSSANPEHHVYQRFGLYTRVEFDRESDSNKHRSLIICTDGQDILTSHTSTNVAIQPRTSTLTILLTVTDQNDNAPFFEKTHYEAELQENCPVGTKVVQVHANDADSETHAKPQYHL--LRNAL-FTSPFDVESETGWIITSADIDRETQALYQLTVLAID-GHLPGTNHRNGRSNFRGQQHTATTHVQIKILDDNDNAPEFRGPRQFAVEENQAPSKWIGDLQVLDRDEGINRDVEFSMANLPSTAASEEQNKTFRVRSVIPIKLTNNGSLYTTEVLDREIQAHYCFEVVVKDKSPSKPLSSTDTICVRVLDLNDNTPKFV--NIRGMSQDLNNRTDAKAFEDLRDITVSLTFREAPGYCALIAEAEDSDEGRNALLRYTIKFDGDTMKTESVAHTPLDAFMMDAQSGRLMLTRTLSGNELGAYPLTLVVEDGGSPSLKSEKNIYIIIEDGPPRGNWLFPENERSIASSMSAKEGNNEAHTILVVIGLSGVSAFLAAVLISAILCMIKPC 956
BLAST of Protocadherin gamma vs. TrEMBL
Match: A0A068YEP3 (Protocadherin gamma OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000828800 PE=4 SV=1) HSP 1 Score: 436.802 bits (1122), Expect = 3.748e-130 Identity = 312/916 (34.06%), Postives = 474/916 (51.75%), Query Frame = 1
Query: 97 LLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSE---------KINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDN---VPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFM----LKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSP--ADNQKT-----KLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFS-----SQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDS--KTFYG------KYDLYTRVRFDREETXXXXXXXXXXXXXGAAKN---------------------PLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMP-------KQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLL----------PNHNENF-FYLTINGSLQSAKEFDRETTDRYCLQIEINDQ-GKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQK------ESI------------TIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPND-------------------------------PDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
LL++F + L L G Q + YA++EN+P R+G + ED L Q +L N S+ + +R ++ + LD T++L TK++ID E+LC C + L + VNVW L I V I V DV+DN P + + +KEVIY GK++EL +A+DRDV+ + +++TY+L+ T M L VTNDS P+LVLK+ LDYE K Y ++ A+N AD+ KT +LS+ I+V+NINDMEP F Q Y V V E++ +II+++A+D D D+ +TY S + S S F V G++ L+ DFE + + + ++ASD +F A+T++ I ++D+NDEAP F +NP+ +EE QP NIIIGQ+ + D D+ A NG L C EP +Q + F+ ++S T +DLYTR DREE ++ D G + LTST+TIS+ + D NDN PIF ++ ++ +EENN + +++++T+ D D N + Y L N + SLF ++ D+G + A DRE Y L +VA D P Q S+ + + I DVND++P +L + EN++PG VG ++ATD D G NG++ F ++ P H + F F +T NGS+ S ++FDRET RYC Q++ D+ + LS T VC+NILDVNDN P +I P + ++ VQ E+I ++ +S+ E+PG+ L +A DLDEGENA + ++L + P F ID + G L + R+L + +G Y + ++VED G P Q I + I+D+
Sbjct: 4 LLFLFSSVFLLSLSKG-EQLQFQLHYAVRENEPSGHRVGYLDED--LRRQQVL-NFSQLCGGGGGCKDLRFRLREPSFHLELDETTALLTTKSIIDFEKLCIGQCRSTLDAHLSVTVNVWQERKLTAFIHVRIQVIDVDDNSVEFPEDIPRPFILCLKEVIYRKGKTIELPRAVDRDVTPKFSSITYRLEFATSQWTSMKMVELSVTNDSRPLLVLKEDLDYEDVKEYGFSLVAYNPSLQADSPKTVVQEAQLSVVIQVLNINDMEPVFPQSVYTVEVPEDIQPGMVIIELKAIDRDADAVLTY-SINSSPGMNLSTPFEVEPDGKVRLRERFDFEQRTDYNLPIRASDGDFAASTRLHIHLLDINDEAPTFIVNPTHLTVEENQPPNIIIGQVVVRDADTFAVNGYLECAEPPEDAERQPLRFERRVESVQSTLESTAVPELHFDLYTRHSLDREEGAAVRLARLVCWDGGGGDSGAEADEVLYGERSTATAGRSVSLTSTLTISIHVQDKNDNAPIFTQSTFAADLEENNDIRKEILQLTSKDYDTEENAITRY---RLTDENEDASLFYLNEDTGHLYAMAHFDRETRDTYHLQVVAYDASQNPLEIPGADHQSISTAMVIVRITDVNDHAPLIQETGELILPENKEPGFLVGQVVATDLDTGVNGEVTFDIVPADPRAVFNGPQHTQVFGFRMTPNGSIFSTRQFDRETQSRYCFQVQAKDKSSEASLSSTTRVCVNILDVNDNSP-IIHSIEGPDARYERDALVQTPPLVGMETIETQHSLASYELPSLRISMNEAPGYCTLLIQAVDLDEGENAELRYSLNLAANCTPSSMPTSRFGHNVEKERKENAEREFRQFSPHTFRIDERTGKLLLVRRLSNKELGSYCLGLVVEDQGHPPLKSIQLIELVIEDV 910
BLAST of Protocadherin gamma vs. TrEMBL
Match: A0A075A251 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_00457 PE=4 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 9.516e-129 Identity = 316/934 (33.83%), Postives = 462/934 (49.46%), Query Frame = 1
Query: 166 IKYAIKENQPGQTRIGKISEDVPLSTQ--------MILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTG-EMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTF---LTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL-----DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKT-------------KLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKT----------------------FYGKYDLYTRVRFDREETXXXXXXX----------XXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPK-------------QQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLL--------PNHNENF-------FYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKT-PLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQK-----ESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDP-----------DIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD-------ILRLEERSKRQKSEHWTKSNKFQX---XXXXXXXXXXXXXXXXXTVLCIIKPC 2616
I+YAIKENQP RIGK+ ED+ + + ++ + YR ++ +YF L +TS L TK IDLE LCP C G QL L V VW +I VE+ + DV+DN P F L+ + +KEVIY GK +EL KAID+D+ E+ + Y+L D+ DTF L + NDS +LVL+K LDYER + Y + A + +D ++ +L I + V+NIND+EP F Q Y + + E+ I +++ ++A D D +S I Y S + S++ F V + G++ + LDFE + + +ASD EF A T++ ITV DVNDE P+F NP ++EE QP +GQ+ I DRDS NG+++C EP L +Q ++F P S Y ++ LYTRV FDRE + + + A P TST+TI LT+ D NDN P FEK Y ++EN P KV++V A D D + Y + LR+ S F ++ ++GW+ + +DRE ++ YQL ++A D G +P+ Q T++ + I IID NDN+P+F GP++ + EN+ +G L D DEG N + F + N+ F LT NGSL + + DRE YC ++ + D+ + PLS T T+C+ +LD+NDN P+ + + + N T K IT+ L+ E+PG+ L EA D DEG NA + I D D F +D Q G L + R L IG Y + ++VED G PS + I + I+D + ERS +N+ I +S SA L + IS +LC+IKPC
Sbjct: 30 IRYAIKENQPENLRIGKLDEDLLQTPENENSELFSLLQSTKRSTLKYRLREPSNYFRLHESTSELSTKVSIDLEALCPRFCREGLSAAQLNLFVAVWYEERPFSVIHVEVTILDVDDNSPQFPPTLSRPYVLQLKEVIYKAGKQVELPKAIDKDIQPENAEIQYRLQSHLDDSSHALDTFHLVIRNDSRVMLVLQKDLDYERVQQYRFYLVASSPVSDERRPFGYVLDPQSAFHDQLEIQVDVLNINDIEPVFSQSTYNIEIPEDTKIGTIVHVLQATDRDANSTIEY-SLENSNELFKVQADGKVIITNKLDFEKRNKYTFTARASDGEFYALTRLDITVTDVNDEPPEFVTNPPILKVEENQPSQTSVGQLLIVDRDSPEVNGRVTCHEPPTLAGRQPLLFFPETSSALPMSPGISLDGAIIDSSANPEHHVYQRFGLYTRVEFDRESDSNKHRSLIICTDGQDIPNSHASTSVAIQPRTSTLTILLTVTDQNDNAPFFEKTHYEAELQENCPFGTKVVQVHANDADSETHAKPQYHL--LRNAL-FTSPFDVEPETGWIITSADIDRETQALYQLTVLAID-GHLPRTNNRNGRTNFRGQQHTATTHVQIKIIDDNDNAPEFRGPRQFAVEENQVSSKWIGDLQVLDRDEGINRDVEFSMANFQSTIASEEQNKTFRVRSIAPIKLTNNGSLYTTEMLDREIQAHYCFEVVVKDKSPSKPLSSTDTICVRVLDLNDNTPKFV--NIRGMSQDLSNRTDVKAFEDLRDITVSLTFREAPGYCALIAEAEDSDEGRNALLRYTIKFDGDTMKPESVSHTPLDAFMMDAQSGRLMLTRTLSGNEIGAYPLTLVVEDGGSPSLKSEKNIYIIIEDGPPRGNWLFPENERSVASSMSAKDGNNEAHTILVVIGLSGVSAFLAAVLISAILCMIKPC 956
BLAST of Protocadherin gamma vs. TrEMBL
Match: A0A068WBV3 (Protocadherin gamma c4 OS=Echinococcus granulosus OX=6210 GN=EgrG_000828800 PE=4 SV=1) HSP 1 Score: 426.017 bits (1094), Expect = 3.535e-126 Identity = 307/915 (33.55%), Postives = 463/915 (50.60%), Query Frame = 1
Query: 88 SLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLS------EKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDN---VPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFM----LKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSP--ADNQKT-----KLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR--SADFS--SQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDS--KTFYG------KYDLYTRVRFDREETXXXXXXXXXXXXXGAAKN---------------------PLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMP-------KQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPN----------HNENF-FYLTINGSLQSAKEFDRETTDRYCLQIEINDQ-GKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQ------------------KESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPND-------------------------------PDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
LFLL F + L L G Q + YA++EN+P R+G + ED+ + L + + +R ++ + LD T++L TK++ID E+LC C + L + VNVW L I V I V DV+DN P + + +KEVIY GK++EL +A+DRDV+ + +++TY+L+ M L VTNDS P+LVLK+ LDYE K Y ++ A N AD+ KT +LS+ I+V+NINDMEP F Q Y V V E++ +II+++A+D D D+ +TY SA S F V G++ L+ DFE + + + ++ASD +F A+T++ I ++D+NDEAP F +NP+ +EE QP NIIIGQ+ + D D+ A NG L C EP +Q + F+ ++S T +DLYTR DREE ++ D G + LTST+TIS+ + D NDN PIF ++ ++ +EENN + +++++T+ D D N + Y L N + SLF ++ D+G + A DRE Y L +VA D P Q S+ + + I DVND++P +L + EN++P VG ++ATD D G NG++ F ++P H + F +T NGS+ S ++FDRET RYC Q++ D+ + LS T VC+NILDVNDN P +I P + +S VQ E ++ +S+ E+PG+ L +A DLDEGENA + + L + P F ID + G L + R+L + +G Y + ++VED G P Q I + I+D+
Sbjct: 3 GLFLL--FSSIFLLSLSKG-EQLQFQLHYAVRENEPSGHRVGYLDEDLRRQQSLNFSQLCGGGGGCKDLRFRLREPSFHLELDETTALLTTKSIIDFEQLCIGQCRSTLDAYLSVTVNVWQERKLTAFIHVRIQVIDVDDNSVEFPGDIPRPFILCLKEVIYRKGKTIELPRAVDRDVTPKFSSITYRLEFATSQWASMKMVELSVTNDSRPLLVLKEDLDYEDVKEYGFSLVACNPSLQADSPKTVVQEAQLSVVIQVLNINDMEPVFPQSVYTVEVPEDIQPGMVIIELKAIDRDADAVLTYSINSAPGMNLSTPFEVEPDGKVRLRERFDFEQCTDYNLPIRASDGDFTASTRLHIHLLDINDEAPTFIVNPTHLTVEENQPPNIIIGQVVVRDADTFAVNGYLECAEPPEDAERQPLRFERRVESVQSTLESTAVPELHFDLYTRHSLDREEGAAVRLARLVCWDGGGGDSGAEADEVLYGDRSTATAGRSVSLTSTLTISIHVQDKNDNAPIFTQSTFAADLEENNGIRKEILQLTSKDYDTEENAITRY---RLTDENADASLFYLNEDTGHLYAMAHFDRETRDTYHLQVVAYDASQNPLEIPGTDHQSISTAMVIVRITDVNDHAPLIQETGELILPENKEPDFLVGQVVATDLDTGVNGEVTFDIVPTDPRAVFNGPQHTQVIGFRMTPNGSIFSTRQFDRETQSRYCFQVQAKDKSSEASLSSTARVCVNILDVNDNSP-IIHSIEGPDARYERDSLVQTPPLVGMETIETQYSLASHELPSLRISMNEAPGYCALLIQAVDLDEGENAELRYSLKLAANCTPPSMPTSRFGHNLEKERKENAEREFRQFSPHTFRIDERTGKLLLVRRLSDKELGSYCLGLVVEDQGHPPLKSIQLIELVIEDV 910
BLAST of Protocadherin gamma vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 259.225 bits (661), Expect = 1.094e-71 Identity = 229/784 (29.21%), Postives = 371/784 (47.32%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVW----DGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASD-NEFNANTKVVITVVDVNDEAPQFNL----NPS--FCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y I+E IG I +D+ +S S + YR + V+ + I T ID E+LCP P+ E + + V D L I+++I V+D NDN P F + I S+ E + + A D D+ N+V YK + F L + + +P L++++ LD E+ Y + I + + + + + + V ++ND P FK+ + EV + E+ P+ + ++Q++A D D ++EI Y + + + + F++ S+ G I ++RPLD E T+ H + V ASD + +A V I V DVND AP +L +P+ + E P N I IT+ D+D++ NGK+ C+ +++ P K Y +Y L T D E T + + K++ + K L T + + + D NDN PIF + V +++ ENN D + +TATD+D GRN + Y+ + P S F +D +G +TA+ DRE + + + A+D GT Q S + +TI+D NDNSPKF + + EN + VG++ TD D G+N + +L N NENF G ++S FDRE Y + D G P S V IN++DVNDNPP +I+P + + + S + PG + + A D D G NA + I N+ +F IDP G + ++ K + G + + + + D G P +H+
Sbjct: 28 YPIREELQENVLIGNIPKDLNISHMNTATGASNNLVYRLVSKAGDNPLLRVMSNTGEIFTTSNRIDREKLCPG--PSYEDSECSFEIEVVILPNDYFRL---IKIKIVVKDTNDNAPMFPSPVINISIPENTL-INSRFAIPSATDPDMGP--NSV-YKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREETANHKLSVLASDGSSSSARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEKDV----------PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASD---SGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQ------LGPNASFFDLDRKTGVLTASRVFDREDQERFLFTVTARDNGTRALQ--SQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVSLSIL-NDNENFILDPYTGVIKSNVSFDREQQSSYTFDVRAVDSGHPPCSSAAKVTINVIDVNDNPPIVIYPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDGDTGMNAELKYTIVNGNNKGLFRIDPVTGNITLEEKPTEADSGLHRLVVNISDLGYPKSLHT 765 HSP 2 Score: 126.331 bits (316), Expect = 5.334e-29 Identity = 155/583 (26.59%), Postives = 250/583 (42.88%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D Y+ + Q F + + +G Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F + I E P + Q+ D D AN ++ + +F L+S T L T R DREET + V+ ++ + T+++ + D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ P V D+ T+ L LD E Y IVA D G QT+ + + + D NDN P F P +L + EN K + + ATD D G N +++++L PN +FF L G L +++ FDRE +R+ + D G L V + ILD NDN P+ H + + ++ +L Y + G +D D GENA +S+ ND + F +DP G+++ +E Y + D+G P + K+ + + D+
Sbjct: 125 IKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDMGPNSVYKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADV-GANAEIKYMFGTQVSPATRRLFA--LNSTT-----GLITVQRPLDREETANHKLSVLASDGSSSS-----ARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFIEKDV---PFHLKAVYDNQYLLETSAL-LDYEGTKEYIFKIVASDSGKPSLNQTA--LVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQLGPN--ASFFDLDRKTGVLTASRVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDADAGENAVV--SLSILNDNENFILDPYTGVIKSNVSFDREQQSSYTFDVRAVDSGHPPCSSAAKVTINVIDV 667
BLAST of Protocadherin gamma vs. Ensembl Cavefish
Match: pcdh9 (protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]) HSP 1 Score: 259.225 bits (661), Expect = 1.442e-71 Identity = 229/784 (29.21%), Postives = 371/784 (47.32%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVW----DGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASD-NEFNANTKVVITVVDVNDEAPQFNL----NPS--FCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y I+E IG I +D+ +S S + YR + V+ + I T ID E+LCP P+ E + + V D L I+++I V+D NDN P F + I S+ E + + A D D+ N+V YK + F L + + +P L++++ LD E+ Y + I + + + + + + V ++ND P FK+ + EV + E+ P+ + ++Q++A D D ++EI Y + + + + F++ S+ G I ++RPLD E T+ H + V ASD + +A V I V DVND AP +L +P+ + E P N I IT+ D+D++ NGK+ C+ +++ P K Y +Y L T D E T + + K++ + K L T + + + D NDN PIF + V +++ ENN D + +TATD+D GRN + Y+ + P S F +D +G +TA+ DRE + + + A+D GT Q S + +TI+D NDNSPKF + + EN + VG++ TD D G+N + +L N NENF G ++S FDRE Y + D G P S V IN++DVNDNPP +I+P + + + S + PG + + A D D G NA + I N+ +F IDP G + ++ K + G + + + + D G P +H+
Sbjct: 28 YPIREELQENVLIGNIPKDLNISHMNTATGASNNLVYRLVSKAGDNPLLRVMSNTGEIFTTSNRIDREKLCPG--PSYEDSECSFEIEVVILPNDYFRL---IKIKIVVKDTNDNAPMFPSPVINISIPENTL-INSRFAIPSATDPDMGP--NSV-YKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADVGANAEIKYMFGTQVSPATRRLFALNSTTGLITVQRPLDREETANHKLSVLASDGSSSSARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDV-NGKVICFIEKDV----------PFHLKAVYDNQYLLETSALLDYEGTKEYIFKIVASD---SGKPSLNQTALVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQ------LGPNASFFDLDRKTGVLTASRVFDREDQERFLFTVTARDNGTRALQ--SQAAVIVTILDQNDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENAVVSLSIL-NDNENFILDPYTGVIKSNVSFDREQQSSYTFDVRAVDSGHPPCSSAAKVTINVIDVNDNPPIVIYPPSNTSFKLVPLSAI--------------PGSVVAEVFAVDGDTGMNAELKYTIVNGNNKGLFRIDPVTGNITLEEKPTEADSGLHRLVVNISDLGYPKSLHT 765 HSP 2 Score: 126.331 bits (316), Expect = 5.193e-29 Identity = 155/583 (26.59%), Postives = 250/583 (42.88%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D Y+ + Q F + + +G Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F + I E P + Q+ D D AN ++ + +F L+S T L T R DREET + V+ ++ + T+++ + D+NDN P I +V + E +PV+ K+ +T +DKD NG V I+ P V D+ T+ L LD E Y IVA D G QT+ + + + D NDN P F P +L + EN K + + ATD D G N +++++L PN +FF L G L +++ FDRE +R+ + D G L V + ILD NDN P+ H + + ++ +L Y + G +D D GENA +S+ ND + F +DP G+++ +E Y + D+G P + K+ + + D+
Sbjct: 125 IKIKIVVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDMGPNSVYKYELVNGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPESSPVGTSVVQLQATDADV-GANAEIKYMFGTQVSPATRRLFA--LNSTT-----GLITVQRPLDREETANHKLSVLASDGSSSS-----ARATVTINVTDVNDNAPNIDLRYIISPTNGTVLLSEKDPVNTKIALITVSDKDTDVNGKVICFIEKDV---PFHLKAVYDNQYLLETSAL-LDYEGTKEYIFKIVASDSGKPSLNQTA--LVRVRLEDENDNPPIFTQPVIELTVSENNKRDLYLTTITATDEDSGRNAEIVYQLGPN--ASFFDLDRKTGVLTASRVFDREDQERFLFTVTARDNGTRALQSQAAVIVTILDQNDNSPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDADAGENAVV--SLSILNDNENFILDPYTGVIKSNVSFDREQQSSYTFDVRAVDSGHPPCSSAAKVTINVIDV 667
BLAST of Protocadherin gamma vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 238.81 bits (608), Expect = 7.071e-65 Identity = 230/780 (29.49%), Postives = 361/780 (46.28%), Query Frame = 1
Query: 166 IKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTS-ILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKG--IIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADI-YSDTFMLKVTND---SFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY---RSADFSSQYFSVS-SKGQIFLKRPLDFETTS---LHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCR--------IEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSK 2430
I Y ++E QP T IG ++ D L L Y+ + Y +D T I T+ ID E L D G+ L V+V D + + +I I VQD+NDN P F + + SV+E + +G + + +A DRD + + + Y L A S F L++ ND P L++ LD E Y+L I A + ++ + + + + + ND P+F++ YE V EN P+ ++QV+A D D + EI Y +++D + + S G I +K PLD E S H+I + ++ T V I V D ND AP + R I E P + + + D+D E N ++C ++ + +D+K KY L T D E D +++ V A L+ST ++ + + D NDN+PIF ++ V E N KV+ V A D D G N + Y I S + LF ID SG V A LDRE + Y+ + A DKG + T++ I ++D NDN PKF + + EN P + VG++ D D+G+N ++ + P+ NF G++ S+ FDRE Y +++ D G+ P S V IN+LD NDN P + P NS+ ++ LS +P + EA D+D G NA + I+ N ++F I P G +++ ++L ++ G + + + V D GKPS+
Sbjct: 25 ILYHVREEQPPNTLIGSLAADQGLPDSGHL--------YKLEVGAPYLRVDGKTGEIFTTEIPIDRETLK-DCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAH-MGATFAIPQATDRDTER-NGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKD-EGENAVVTCVVAGDVPFQLRPAGDSSVDNKK---KYFLQTTTPLDYERIRDYRVEIVAVDSGNPA---LSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSST---RGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATV--VIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVG-NFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKP---------SNSSFRR------LSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSR 765 HSP 2 Score: 130.954 bits (328), Expect = 1.945e-30 Identity = 148/578 (25.61%), Postives = 244/578 (42.21%), Query Frame = 1
Query: 859 VEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSK-GQIFLKR-PLDFETTSLHLI---------DVQASDNEFNANTKVV---ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKL-----SCWEPRNLYNKQAVIFKP-PLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTS--SCXXXXXXXXXXXXSPKFIGPKK-----LEIFENEKPGTEVGILIATDNDEGDN--------GKLLFKLLP------NHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFR-ISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
V E P N++I + A DS Y+ + + Y V K G+IF P+D ET I +V +D N + +++ I V D+ND PQF ++E DRD+E NG L + E L++ Q + L G D + +D + I DG + +S + + + I D NDN P FEK+ Y + EN+PV V++V A D D+G NG + Y I ++ +P + I+ +G ++ LDRE+ S ++ ++A+DKG PK T+ S + + + IG + I E+ GT V ++ +D DEG+N G + F+L P ++ + +F LQ+ D E Y ++I D G LS T+++ + + D NDN P P + ++ + PG ++L A D D G NA + I+ + +F IDP G +R + L +E Y ++ D G PS + +++++ D
Sbjct: 29 VREEQPPNTLIGSLAADQGLPDSGHLYK-LEVGAPYLRVDGKTGEIFTTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTER-NGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYD----------LTINAVDGGTPSRYSSAL-LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIH--QASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYF-------LQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFE-----------------VEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLD 567
BLAST of Protocadherin gamma vs. Ensembl Cavefish
Match: pcdh1a (protocadherin 1a [Source:ZFIN;Acc:ZDB-GENE-091116-32]) HSP 1 Score: 239.965 bits (611), Expect = 1.092e-64 Identity = 231/781 (29.58%), Postives = 359/781 (45.97%), Query Frame = 1
Query: 166 IKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTS-ILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKG--IIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADI-YSDTFMLKVTND---SFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY---RSADFSSQYFSVS-SKGQIFLKRPLDFETTS---LHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCR--------IEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKT-FYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSK 2430
I Y ++E QP T IG ++ D L L Y+ + Y +D T I T+ ID E L D G+ L V+V D + + +I I VQD+NDN P F + + SV+E + +G + + +A DRD + + + Y L A S F L++ ND P L++ LD E Y+L I A + ++ + + + + + ND P+F++ YE V EN P+ ++QV+A D D + EI Y +++D + + S G I +K PLD E S H+I + ++ T V I V D ND AP + R I E P + + + D+D E N ++C + +P DS KY L T D E D +++ V A L+ST ++ + + D NDN+PIF ++ V E N KV+ V A D D G N + Y I S + LF ID SG V A LDRE + Y+ + A DKG + T++ I ++D NDN PKF + + EN P + VG++ D D+G+N ++ + P+ NF G++ S+ FDRE Y +++ D G+ P S V IN+LD NDN P + P NS+ ++ LS +P + EA D+D G NA + I+ N ++F I P G +++ ++L ++ G + + + V D GKPS+
Sbjct: 61 ILYHVREEQPPNTLIGSLAADQGLPDSGHL--------YKLEVGAPYLRVDGKTGEIFTTEIPIDRETLK-DCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAH-MGATFAIPQATDRDTER-NGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYDLTINAVDGGTPSRYSSALLRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIHQASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKD-EGENAVVTCV----VAGDVPFQLRPAGDSSVDNKKKYFLQTTTPLDYERIRDYRVEIVAVDSGNPA---LSSTNSLRVQVTDTNDNSPIFSPPLFEVEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSST---RGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATV--VIKVLDRNDNDPKFMLSSYSFSVLENMPPLSPVGMVTVLDMDKGENAQVQLSVEPDVG-NFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNAPVVTKP---------SNSSFRR------LSPLAAPDSVVEVVEAEDIDYGSNAELVYSIAGGNPHELFYISPSDGEIKLTKELTRKHGGLHRLVVKVSDRGKPSR 801 HSP 2 Score: 130.568 bits (327), Expect = 2.942e-30 Identity = 149/578 (25.78%), Postives = 244/578 (42.21%), Query Frame = 1
Query: 859 VEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSK-GQIFLKR-PLDFETTSLHLI---------DVQASDNEFNANTKVV---ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKL-----SCWEPRNLYNKQ-AVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTS--SCXXXXXXXXXXXXSPKFIGPKK-----LEIFENEKPGTEVGILIATDNDEGDN--------GKLLFKLLP------NHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFR-ISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
V E P N++I + A DS Y+ + + Y V K G+IF P+D ET I +V +D N + +++ I V D+ND PQF ++E DRD+E NG L + E L++ Q A L G D + +D + I DG + +S + + + I D NDN P FEK+ Y + EN+PV V++V A D D+G NG + Y I ++ +P + I+ +G ++ LDRE+ S ++ ++A+DKG PK T+ S + + + IG + I E+ GT V ++ +D DEG+N G + F+L P ++ + +F LQ+ D E Y ++I D G LS T+++ + + D NDN P P + ++ + PG ++L A D D G NA + I+ + +F IDP G +R + L +E Y ++ D G PS + +++++ D
Sbjct: 65 VREEQPPNTLIGSLAADQGLPDSGHLYK-LEVGAPYLRVDGKTGEIFTTEIPIDRETLKDCRIKGKPCFLEFEVSVTDLIQNQSPRLIEGRIEVQDINDNTPQFPSPVLTLSVQENAHMGATFAIPQATDRDTER-NGVLKYDLSAGPEASALFSLQMANDRGEKLPQLIVLGNLDRELKDSYD----------LTINAVDGGTPSRYSSAL-LRVVITDANDNAPQFEKSSYEAEVSENSPVGYSVLQVKANDSDLGPNGEIEYTIH--QASDPVPKMLQIERSTGIISVKGPLDREEISSFKFHVIARDKGPSPKSSTTYVSIEVTDQNDNAPAVEIRGIGLRTHSDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPAGDSSVDNKKKYF-------LQTTTPLDYERIRDYRVEIVAVDSGNPALSSTNSLRVQVTDTNDNSPIFSPPLFE-----------------VEFAEENQPGEKVLDVIALDADSGTNAELVYSIIADSSTRGLFEIDPSSGEVRARSPLDREHKERYEFRVTAADKGVPSHRGTATVVIKVLD 603
BLAST of Protocadherin gamma vs. Ensembl Cavefish
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 236.884 bits (603), Expect = 4.359e-64 Identity = 227/808 (28.09%), Postives = 372/808 (46.04%), Query Frame = 1
Query: 97 LLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILR---NLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGL---SLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-------YFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFN----LNP--SFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK-SLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
L+ I CL++L + Q D Y +KE QP RIG + D+ L+ ++ L K Y+ V S I T ID E LC +G + + + + ++++ ++D+NDN P F ++ I S+ E + + A D DV + Y+L + F L + D +P L++++ LD E + + I + + + + + V ++ND P FK + EV+V EN P+ + + Q+ A D D S + FS+Q +F++ SS G I +K+PLD E+ +H + V ASD + V++ V DVND P + +NP + E P N I IT+ DRD++ NGK++C+ ++ + KP F ++ L T D E T + K++ + K PL ++ + + I D NDN P+F + +SI ENN ++IK+TATD D G N L+ Y S+ P+ F ID SG ++ + +LDREK+ Y ++A+D G+ P Q S+ T+ + + D NDNSP F + + EN VG++ TD D GDN + ++ N +NF G ++ FDRE Y ++ D G + V IN++DVNDN P + P + Y + +T +PG + + A D D G NA + I + +F+ID G + ++ K+ G + + + V+D G+P +HS
Sbjct: 50 LVLILTCLVSL----CWAQEKD---YTVKEEQPENVRIGNLRTDLDLNLDPNIKLSSALQFKPVYKTGDVPLVRVEASTGEIFTTANRIDRERLC-----SGVFNEKRCFYEIEVAVLPDEIFRLVKIRFLIEDINDNAPLFQSTVINISIPENT-AINNRYPVPSAFDPDVGI-NGIQHYELVKSVSE--FGLDIIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTQLHATDADLGSNAQIHFS-FSNQISPATKRHFAIDSSTGLITVKQPLDRESNPVHKLIVLASDGSATPSRATVIVNVTDVNDNVPSIDTRYIMNPVNGTVLLSENAPLNTKIALITVTDRDADL-NGKVTCYTDHDVPFR----LKP-----VFNDQFLLETAAPLDYETTREYAIKIVASD---SGKPPLNTSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIKITATDADSGSNALIIY------SLGPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQ--SNVTVKLIVQDQNDNSPAFTHAEYNFYVPENLPLYGTVGLITVTDADAGDNAIVTLSII-NGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPFTT--------------NPGSVVTRVFAIDNDTGMNAELQYSIIGGSPRGLFAIDKTTGNITLQEKIANADQGLHRLVVKVKDLGQPESLHS 804 HSP 2 Score: 124.79 bits (312), Expect = 1.836e-28 Identity = 151/581 (25.99%), Postives = 245/581 (42.17%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED------EDSEITYRSADFSSQYFSVSSKG---QIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVV-ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I + +IND P F+ +S+ EN IN+ A D D + E+ ++F Q+ +++ LD ET ++ ++ D N ++T ++ +TV DVND P F + + E P + Q+ D D +N ++ + F +DS T + + DRE V+ G+A S T+ + + D+NDN P I +V + EN P++ K+ +T TD+D NG VT D+ K +F +D + LD E Y + IVA D G P +S + I I D NDN+P F P+ +L I EN PGT++ + ATD D G N +++ L P+ + F +G L +K DRE ++Y + D G PL TV + + D NDN P H +Y + + +L +Y + G +D D G+NA +S+ N D F IDP+ G+++ +E Y + D+G K+ + + D+
Sbjct: 163 VKIRFLIEDINDNAPLFQSTVINISIPENTAINNRYPVPSAFDPDVGINGIQHYELVKSVSEFGLDIIETPEGDKWPQLIVQQNLDRETKDTFVMKIKVEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTSVTQLHATDADL-GSNAQIHFSFSNQISPATKRHFA--IDSSTGL----ITVKQPLDRESNPVHKLIVLASD--GSAT---PSRATVIVNVTDVNDNVPSIDTRYIMNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFR-LKPVF---NDQFLLETAAPLDYETTREYAIKIVASDSGKPPLN--TSAMVLIKIKDENDNAPVFPQPEIQLSIPENNDPGTQLIKITATDADSGSNALIIYSLGPDAPDGFNIDPRSGILSVSKRLDREKQEKYSFTVIARDNGSNPLQSNVTVKLIVQDQNDNSPAFT----HAEYNFY---------VPENLPLYGTVGL----ITVTDADAGDNAI--VTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDSGLIQTTSYAKVTINVVDV 706
BLAST of Protocadherin gamma vs. Ensembl Sea Lamprey
Match: pcdh11 (protocadherin 11 [Source:ZFIN;Acc:ZDB-GENE-140106-21]) HSP 1 Score: 215.312 bits (547), Expect = 6.839e-58 Identity = 210/736 (28.53%), Postives = 349/736 (47.42%), Query Frame = 1
Query: 352 IDLEELCPDHCPTGE--MGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL---DADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS--EITYR---------SADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDN------------EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK-SLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTI-NGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKIL 2451
+D E LC P E + V+ V G K +I V INV+D+NDN P F + SV E GK +Q A D D S+ + Y+L D S F L VT + P LV++K+LD E +LY + + A + + + I V + ND P F Q + V + EN P+ + ++Q+ A D D S E+ YR S + F + + G + + L+ E + ++ I + A+D + +++ D N I E N+ + IT+ D D ANG ++C+ +YN + V F+ L T+ +Y L TR D E T ++ I D GA L+ TM++++ + D NDN P+F + Y VS+ ENN + +I V+ATD+D+ +N + Y + P+ ++F +D ++G ++ T +LDREK++ Y I+AKD+G +P + + T+ + ++DVNDN P+F + + EN + VG++ D+DEG+NG++ +L N F + +G ++S FDRE Y L+++ D G+ S T V I+++D+NDN P ++ P + Y ++ T+ PG + + A D D NA + I N ++F IDP IG + + L + G + + + V D G + H+ ++
Sbjct: 102 MDREALCGGQDPGDECHVDVQVGVLPVQPGPFFK-LIEVRINVEDINDNAPAFAAPVLTVSVPENAPA-GKRFPIQPANDPD-SEANGVRRYELLPSDPATVS-AFELSVTETANGEKVPYLVVRKSLDREERQLYEMNLRAVDGGSPPHSGSAVLRINVTDTNDNSPVFDQAEVNVEIPENSPVGTHVVQLHASDRDAGSNAEVVYRLGTSTGGAGSGQGGKRLFRLDQNSGLVTVNGLLNREESPVYRIIILATDKGPEPVPATATVTVTVTDVNDNSPTIEIRDIVAPVN---GVIYISEASHVNLPVALITVSDPDI-GANGAVTCY----IYNPE-VPFQ--LKKLTYPNQYLLETRETLDYE-TKNEYVVQIKAADAGATS--LSRTMSVTIKLLDSNDNAPVFTEPTYKVSVPENNVIGKHLITVSATDRDMDKNAEMVY------FLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQG-IPVLE-GNATVIVNVLDVNDNRPRFSLAEFDFYVNENVPKHSTVGMVTVADSDEGENGRVRLSILGTDNRQLFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDINDNSPIVLMPPSNTTYKFVVPRTL--------------PGTIVTEVSAVDNDAEINAELRYHIVGGNPHNLFHIDPVIGNITLMEPLTETHHGLHRLVVRVSDIGIAVQHHAVALV 797 HSP 2 Score: 98.9821 bits (245), Expect = 3.100e-21 Identity = 94/327 (28.75%), Postives = 149/327 (45.57%), Query Frame = 1
Query: 1501 VSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK--SLFVIDSDSGWVTATLK-LDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I E + V+ V +T +D DIG NG VT I NPE L + + ++ T + LD E ++ Y + I A D G +T S TI + + N +P F P K+ + EN G + + ATD D N ++++ L P+ F G + ++ DRE Y I DQG L TV +N+LDVNDN PR ++ + N V K S +++ +D DEGEN I ++ +FSIDP+ G++R +E Y +++ D G+P + + K+++ + DI
Sbjct: 393 IYISEASHVNLPVALITVSDPDIGANGAVTCYI-----YNPEVPFQLKKLTYPNQYLLETRETLDYETKNEYVVQIKAADAGATSLSRTMSVTIKLLDSNDN--APVFTEPTYKVSVPENNVIGKHLITVSATDRDMDKNAEMVYFLGPDAPTMFHMDPETGIISLTEQLDREKKANYSFTILAKDQGIPVLEGNATVIVNVLDVNDNRPRFSLAEF----DFYVNENVPKHSTVGMVTV-------------ADSDEGENGRVRLSILGTDNRQLFSIDPESGMIRSNVGFDREQRHYYVLEVQATDGGEPVRSSTVKVVIHVMDI 695
BLAST of Protocadherin gamma vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006996.1 (pep scaffold:Pmarinus_7.0:GL476780:2096:143714:1 gene:ENSPMAG00000006222.1 transcript:ENSPMAT00000006996.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 200.675 bits (509), Expect = 1.614e-52 Identity = 200/710 (28.17%), Postives = 327/710 (46.06%), Query Frame = 1
Query: 448 GIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFS--SQYFSVSSKGQ---IFLKRPLDFE-----TTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIW----DRDSEAANGKLSCWEPRNLYNKQAVI-FKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWV-TATLKLDREK------ESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIG-PKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWID-NSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDILRLEERSKR 2496
G RV I + + NDN P F SV E +G S+ A D D + V+Y D SD F L + + ++ + ALD+E + + + A + Q+T + I ++++ND P F++ Y + EN + +++V A DED +++ITY S S YFS++ G + L R LD+E T SL ++ + N+ ++ V D ND +P F+ N I PENI+ G ++ D D G+LS +Y+ + F+ +++++ D+ + DRE + V V G + T T+++T+ D+NDN P + Y+V+I EN P + V+A D D+ NG + Y ID P + I++ SG + T L+LDRE S +++ D+G+ P++ T+S T+ + + DVNDN P F+G P L++ E + + + ATD DEG NG + + + F L G + + + DRE Y L++ D+G LS T T+ + +LDVNDN P +HP + + +V ++S+ I L C +D D G NA F I+ N FS+ + G++R L +E Y++ I DNG S++ D+L L+ R
Sbjct: 12 GSARVHITLINENDNRPIFSLPLYNVSVWENAT-LGTSVVQVLATDLD-AGVFGQVSYHFSDD--SDKFSL---DPASGLISVAAALDFEATPRFTVTVMARD--GGGQETAGRVRINLLDVNDNTPVFQRDSYVGTARENDNSLTPVVRVRATDEDSPPNNQITYSILPTSAYSSYFSITVSGGYGVVTLARALDYEKIPGGTISLTIMALDGGSPPLNSTVTAIVEVFDENDNSPIFDRNSYSIAI----PENILAGATVLYVNATDGDQSPEYGQLSL-----IYSLEGSTQFR--INARSG----DITSTTLLDREAVSQYILIVRAVDG-GDGNDQKTGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTDIFTVSAADPDLNENGTLVYAID------PPNPFYRINAASGKIRTTGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVLEGLPANSTLFQVTATDPDEGANGNVTYSMTAALPRPDFQLDAATGLITTLVQLDREAVAAYQLRLVATDRGTPALSSTTTLSLVVLDVNDNAPT-----FHPARSAVSLMESVARDSVVIS-----------LNC--TDADSGLNAELSFFITGGNQDGQFSVGFRDGLVRTVVSLDRETKASYSLVIEAIDNGPAG---SRRTGTTTLDVLVLDVNDNR 669 HSP 2 Score: 191.815 bits (486), Expect = 1.110e-49 Identity = 207/784 (26.40%), Postives = 354/784 (45.15%), Query Frame = 1
Query: 271 KINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYK-LDADIYSDTFMLKVTNDSFPILVLKKALDYERC--KLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFS---SQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDNEFNANTK-----VVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREET-----XXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTI-NGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCIN--ILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYE--SPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGIL-RVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDILRLEERSKR-----QKSEHWTKSNKFQ 2535
+++Y F F LD + ++ +D E + + V DG + RV IN+ DVNDN P F S + + +E + + + +A D D S +N +TY L YS F + V+ + ++ L +ALDYE+ +L I A + + + ++ + V + ND P F + Y +++ EN+ + ++ V A D D+ E S +S S F ++++ G I LD E S +++ V+A D + K V IT++DVND P + P I E P I ++ D D + +P N + + GK T ++ DRE+ V+ D G+ T++ T+++ + D+NDN P F Y++ + E P ++ + +VTATD D G NG VTY ++ + P F +D+ +G +T ++LDRE + YQL +VA D+GT +S+ T+++ ++DVNDN+P F + + + E+ + V L TD D G N +L F + + + F + +G +++ DRET Y L IE D G T T ++ +LDVNDN P + Y ++S+ E + G IL+ +A+D+DEG N +RI N F ++ G++ R L +E + + +Q+ +N V + ++R+ R R + S H + S+ F+
Sbjct: 64 QVSYHFSDDSDKFSLDPASGLISVAAALDFEATP----------RFTVTVMARDGGGQETAGRVRINLLDVNDNTPVFQRDSYVGTARENDNSLTPVVRV-RATDED-SPPNNQITYSILPTSAYSSYFSITVSG-GYGVVTLARALDYEKIPGGTISLTIMALDGGSPPLNSTVTAIVEVFDENDNSPIFDRNSYSIAIPENILAGATVLYVNATDGDQSPEYGQLSLIYSLEGSTQFRINARSGDITSTTLLDREAVSQYILIVRAVDGGDGNDQKTGIATVNITLLDVNDNDPAWRDLPYAVTIVENTPGGTDIFTVSAADPDLNENGTLVYAIDPPNPFYRI----------NAASGKIRT-TGLQLDREDLNPISFASMRSIVVSGADRGSPPRRATASATVTVLLQDVNDNEPSFVGLPYALQVLEGLPANSTLFQVTATDPDEGANGNVTY---SMTAALPRPD-FQLDAATGLITTLVQLDREAVAAYQLRLVATDRGT--PALSSTTTLSLVVLDVNDNAPTFHPARSAVSLMESVARDSVVISLNCTDADSGLNAELSFFITGGNQDGQFSVGFRDGLVRTVVSLDRETKASYSLVIEAIDNGPAGSRRTGTTTLDVLVLDVNDNRPLFLEGSY-------------------EVSVPENVTRGAIILQVQATDIDEGINGRVWYRIISGNQDGNFLVNVSSGLISRGATPLDRETVALHALQVEAFNNDS----------VGLSSVIRVRSRWGRWGLITRPSHHTSISSPFK 788 HSP 3 Score: 162.155 bits (409), Expect = 1.953e-40 Identity = 182/728 (25.00%), Postives = 313/728 (42.99%), Query Frame = 1
Query: 400 GQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSK-EHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFS---------------VSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVV---------ITVVDVNDEAPQFNL-NPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIF-EKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLR----SMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAA-----FHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS-QKILVRIQDI 2469
G+L L + V DG +R+ + V DVNDN PTF +S V E VG S+ + KA+DRD+ + TV Y + A +DTF + ++S ++V +DYE Y L + A + + + + N D + F Y+ ++ E +++++V A ++ A ++ + +G+I + LD E T +++ V + D V+ + V D ND +P+F + + + E ++ + DRD+ +NG +S + + + + +++ D+ + D E IV DG + P ++T +S+ + D+NDN PIF Y+VS+ E V V ATD D G NG VT+ I++ S+ P + V +DRE + Y L++VA D+G P + S + + + DVND P F+ P + + + E+ G+ V + AT+N +G N K +K+ F +G + S + ++ +R+ L D G+ PL + + +LDVND+ P + P P T ++ + V I I++ A D DEG+N A H D + F I+ GI+ R L +E Y++ ++ D G+P S Q + V + DI
Sbjct: 1576 GRLELTILVQDGGRRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSI-ASGGNDTFGI---DESTGLIVTVAPIDYETRPEYLLMVVATDQAPPFHTASCELRVSLQNELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQMKAPPKLPLPLAILVQKWHEDKRHKQQESDNAELIAALQGEITTQAALDREATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEFEAGSATLVEVRESAAPGTLLTVLHATDRDA-GSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDV---AKADFVEKTSQFILFRIVALDGGSP-PRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFRIESGGGDKLSIGPSDGII-------RVAPGANIDRETRAAYTLMVVAVDRGNPP--LSGSAIVRVLVDDVNDERPAFLAPVQTVSVLESLSVGSFVATVKATENYKGHNTKYTYKIAGIGKNAFTVHATSGLVTSTRLL--KSYERFNLTAVATDHGRPPLWGQAGLYVEVLDVNDHRPVFVLP---PNGTVVNITEVMPVVI------------RIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSGIISTARALDRESQAVYSLILLASDQGQPVSYESTQPLQVVLDDI 2268 HSP 4 Score: 127.102 bits (318), Expect = 1.167e-29 Identity = 108/349 (30.95%), Postives = 171/349 (49.00%), Query Frame = 1
Query: 1411 KNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEEN-NPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDRE-KESFYQLIIVAKDKGTMPKQQ-TSSCXXXXXXXXXXXXSPKFI----GPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLT-INGSLQSAK--EFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLI-FPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAF---HFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDN 2415
P +T ++ + I D NDN P F A Y V + E + V VTA+D D G N V Y I + + + F ID+ +G +TA LD E Y L++ A D+ P ++ TS+ T+++ + DVND +P F+ GP +++ E + PG + +A+D D G NG+L + ++ N F ++ +G L+ + E DRET Y L I D G PL+ T TV + +LDV+DN P + P N+++ + + + + + + ASD +EG N A H S N F D Q G++ V R L +E + +Y + + V DN
Sbjct: 1149 ATPAQATTSVLIRITDENDNAPAFGAATYEVLLTEGPSTAGVAVANVTASDPDEGDNARVVYAIVSGNT----AATFGIDNGTGVLTAVKALDFEVSAGLYLLVVTATDQPRDPARRLTSTATVSVHVADVNDVTPWFLRSYEGP--IDVSEGQ-PGPRIATFMASDQDSGLNGELEYSIIDGDPRNEFVISPADGDLRVRRYVELDRETQAFYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVFLNLP---------ANASLSEAAAVLAI---------VSRVRASDANEGRNCAALLQHSPTSFCNGERAFYADSQTGLVYVNRPLDRERVAEYRLTLTVRDN 1472 HSP 5 Score: 123.25 bits (308), Expect = 1.783e-28 Identity = 168/600 (28.00%), Postives = 257/600 (42.83%), Query Frame = 1
Query: 763 ADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQ-VEAVDEDE--DSEITYR--SADFSSQYFSVSSKGQIFLKRPLDFETTS-LHLIDVQASDN------EFNANTKVVITVVDVNDEAPQFNLN-PSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSC----WEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPK-QQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGIL----IATDNDEGDNGKLLFKLLPNHNENFFYLTING--SLQSAKEFDRET--TDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESP--GFEILKCEASDLDEGENAAFHFRISLPNDP-DIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDIL 2472
A + S+ IR+ + ND P F YEV + E + + V A D DE ++ + Y S + ++ + + G + + LDFE ++ L+L+ V A+D + V + V DVND P F + + EGQP I D+DS NG+L +PRN + P D +Y V DRE T I+ D G PL ST+T+ + + D++DN P+F + S+ E V A V +V A+D + GRN + N E++ F DS +G V LDRE+ + Y+L + +D P + S + +TI+D NDNSP F + EI EN GT + +L A+D D G N L + LL + F G S+ + DRE R L I + D G+ + T + + +LDVNDN P N T Q + + SP G ++ +A D D G A R S+ + D F ID G++ + E +Y + ++ D P S ++ V +Q+ L
Sbjct: 1149 ATPAQATTSVLIRITDENDNAPAFGAATYEVLLTEGPSTAGVAVANVTASDPDEGDNARVVYAIVSGNTAATFGIDNGTGVLTAVKALDFEVSAGLYLLVVTATDQPRDPARRLTSTATVSVHVADVNDVTPWFLRSYEGPIDVSEGQP-GPRIATFMASDQDS-GLNGELEYSIIDGDPRNEF------VISPADGDLRVRRY-----VELDRE-TQAFYNLTIMAKDMGTP--PLNSTLTVGVRVLDVHDNDPVFLNLPANASLSEAAAVLAIVSRVRASDANEGRNCAALLQHSPTSFCNGERA-FYADSQTGLVYVNRPLDRERVAEYRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSPVFSQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAYSLLGGSSAYFLIDRDRGNVSMALGQGLDREGIPGGRLELTILVQDGGRR--NATVRLGVTVLDVNDNTPTF-------------NVTSQTAHV-----LENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDTFGIDESTGLIVTVAPIDYETRPEYLLMVVATDQAPPFHTASCELRVSLQNEL 1711 HSP 6 Score: 116.316 bits (290), Expect = 2.327e-26 Identity = 170/722 (23.55%), Postives = 284/722 (39.34%), Query Frame = 1
Query: 307 FVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWD-----GLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYG-VGKSMELQKAIDRDVSKEHNTVTYKL-DADIYSDTFMLKVTNDSFPILVLKK--ALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDED----SEITYRSADFSS---QYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTK------VVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQIT--IWDRDSE-AANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNP-VDAKVIKVTATDKDIG--RNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEV------------------GILIAT-------DNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHT------VCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESIT-IDLSIYESPGFEILKCEASDLDEGENAAFHFR 2289
F +D+ T +L +D E G LVV D L V ++V DVND P FL S + +V G G + A D+D S + + Y + D D ++ + D L +++ LD E YNL I A + + L++ +RV++++D +P F S+ E + +++ +V A D +E + + + F + +++ S G +++ RPLD E + + + + DN N + +++T++D ND +P F+ I E P ++ + I+ D++ N L+ +L + F D G + DRE ++ I+ DG +N +T+ + +T+ D+NDNTP F + + EN+P V VI V A D+D+G G V Y I + F ID +G + +D E Y L++VA D+ P T+SC + +++ + D F + + + E PGT V IL+ E DN +L+ L G + + DRE TD Y L + D G T V +N+ D NDN P + S T +++ +PG + A+D D G N R
Sbjct: 1221 FGIDNGTGVLTAVKALDFEV---------SAGLYLLVVTATDQPRDPARRLTSTATVSVHVADVNDVTPWFLRS--YEGPIDVSEGQPGPRIATFMASDQD-SGLNGELEYSIIDGDPRNEFVISPADGD----LRVRRYVELDRETQAFYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVFLNLPANASLSEAAAVLAIVSRVRASDANEGRNCAALLQHSPTSFCNGERAFYADSQTGLVYVNRPLDRERVAEYRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSPVFSQVTYEAEIPENSPNGTVLTVLNGPIYASDADFGVNATLAY----SLLGGSSAYFLIDRDR----GNVSMALGQGLDREGIPGGRLELTILVQDGGRRN---ATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSI-----ASGGNDTFGIDESTGLIVTVAPIDYETRPEYLLMVVATDQA--PPFHTASCELRVSLQNELDEKLSFSLAAYQAALSEAAVPGTVVVRVAAPQMKAPPKLPLPLAILVQKWHEDKRHKQQESDNAELIAAL-------------QGEITTQAALDREATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEF-----------------EAGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSAR 1878 HSP 7 Score: 115.931 bits (289), Expect = 2.428e-26 Identity = 168/652 (25.77%), Postives = 284/652 (43.56%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTF-LTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDT-----FMLKVTNDSFPILV-LKKALDYERCKLYNL-AIWAWNSPADNQKTKLSITIRVVNINDMEPKF-KQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVSSKGQIFLKRP---LDFETTSLHLIDVQASDNE---FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIF--EKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEK-SLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI------GP-KKLEIFENEKPGTEVG-ILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGK-TPLSIT------------HTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRI 2292
V +NV D NDN P F S+ L V+E G + + A DRD + + TV+ + A ++ T ++L + N+S +V + KA E+ + L I A + + + T ++++ V+++ND P F Y VSV E +++ V A D D + ++T+R S+ I P +D ET + + + V A D + + V + V DVNDE P F + E ++ +G + +E G + + K A I K ++ T + L T R + ++ V + PL + + + D+ND+ P+F V+I E PV ++++V A D D G+NG V Y + + F I++ SG ++ LDRE ++ Y LI++A D+G P S+ + + + D++DN P FI P + I E+ PGT VG + A D D G N + + + + N F L+ G L + DRE + Y + ++ + TP T V + + D+ND P +F ++ +YT + +D + G E+L+ EA D D G N+ +RI
Sbjct: 1825 VYVNVTDENDNSPEFEAGSATLVEVRESA-APGTLLTVLHATDRD-AGSNGTVSAR--AHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIFLSPGGYAVSVVELGAPGTLVASVWATDADAGPNGQVTFRIESGGGDKLSIGPSDGIIRVAPGANIDRETRAAYTLMVVAVDRGNPPLSGSAIVRVLVDDVNDERPAFLAPVQTVSVLE----SLSVGSFVATVKATENYKGHNTKYT-----YKIAGIGK---NAFTVHATSGLVTSTRLLKSYERFNLTAVATDH----GRPPLWGQAGLYVEVLDVNDHRPVFVLPPNGTVVNITEVMPVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSGIISTARALDRESQAVYSLILLASDQG-QPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFSIPEHSPPGTAVGNVSGAVDADVGANAIVYYFIAAGNEGNKFNLSRWGLLVVLSDLDREVSPYYAIIVKASSNPNWTPAVTTGPEFDPSKDRTLREVRVYLEDINDQWP--VFTNH--EYT---------AGVAVDAKV----GSELLQLEAVDRDVGNNSIVLYRI 2438 HSP 8 Score: 108.612 bits (270), Expect = 4.986e-24 Identity = 141/559 (25.22%), Postives = 243/559 (43.47%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYE-RCKLYNLAIWAWNSPADNQK---TKLSITIRVVNINDMEPKFKQQKYE--VSVEENLPINSMIIQVEAVDEDE--DSEITYR--SADFSSQYFSVSSKGQIFLKR--PLDFETTSLHLIDVQASDNE---FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVT-----ATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATL--KLDREK--ESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKP-GTEVGILIATDNDEG--DNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQG 2052
V I + D NDN P F ++ + E G ++ A D D ++ V Y + + + TF + ++ +L KALD+E LY L + A + P D + + ++++ V ++ND+ P F + YE + V E P I A D+D + E+ Y D +++ + G + ++R LD ET + + + + A D N+ V + V+DV+D P F P+ + E I+ ++ D + L P + N + + DS+T +Y DRE + + + + + + +TI D NDN+P+F + Y I EN+P + V+ V A+D D G N + Y + + + F+ID D G V+ L LDRE +L I+ +D G ++ ++ + +T++DVNDN+P F + + + EN GT V ++ A D D G D G + + + N+ F G + + D ET Y L + DQ
Sbjct: 1158 VLIRITDENDNAPAFGAATYEVLLTEGPSTAGVAVANVTASDPD-EGDNARVVYAIVSGNTAATFGI---DNGTGVLTAVKALDFEVSAGLYLLVVTATDQPRDPARRLTSTATVSVHVADVNDVTPWF-LRSYEGPIDVSEGQP-GPRIATFMASDQDSGLNGELEYSIIDGDPRNEFVISPADGDLRVRRYVELDRETQAFYNLTIMAKDMGTPPLNSTLTVGVRVLDVHDNDPVFLNLPANASLSEAAAVLAIVSRVRASDANEGRNCAALLQHSPTSFCNGERAFYA---DSQTGL----VYVNRPLDRERVAEYRLTLTVRDNPDNPSYARKDSDIMIVTILDENDNSPVFSQVTYEAEIPENSP-NGTVLTVLNGPIYASDADFGVNATLAYSL-----LGGSSAYFLIDRDRGNVSMALGQGLDREGIPGGRLELTILVQDGG----RRNATVRLGVTVLDVNDNTPTFNVTSQTAHVLENSPAVGTSVIVVKAMDRDLGVCDAGTVRYSIASGGNDTFGIDESTGLIVTVAPIDYETRPEYLLMVVATDQA 1693 HSP 9 Score: 96.2857 bits (238), Expect = 2.676e-20 Identity = 150/619 (24.23%), Postives = 258/619 (41.68%), Query Frame = 1
Query: 697 KKALDYERCKLYNLAIWAWNSPADNQKTKLS------ITIRVVNINDMEPKFKQQKYE-VSVEENLPINSMIIQVEAVDEDEDS-------EITYRSADFSSQYFSV---SSKGQIFLKRPLDF-ETTS----LHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNP---SFCRIEEGQPENIIIGQITIWDRDSEAA-NGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVR----FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKK---LEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHN------ENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINIL--DVNDNPPR-LIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCE-ASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKP 2424
+ ALD E Y L + + + L+ + + V + ND P+F+ V V E+ +++ + A D D S T+ QY + S I DF E TS ++ + + + + V+DVND P F L+P + +E G P ++ ++W D++A NG+++ +K ++ G D RV DRE T +++ D G PL+ + + + + D+ND P F V +VS+ E+ V + V V AT+ G N TY+I + K+ F + + SG VT+T +L + E F L VA D G P + + + ++ + P F+ P + I E + ++A D DEG NG + + L E+F +G + +A+ DRE+ Y L + +DQG+ P+S T + ++ D++DN P ++ PD Y + + + PG + A D D G NA ++ I+ N+ + F++ + G+L V L +E+ Y IIV+ + P
Sbjct: 1788 QAALDREATDSYMLTVLSRDGGPREAIAVLTNKPGAYVYVNVTDENDNSPEFEAGSATLVEVRESAAPGTLLTVLHATDRDAGSNGTVSARAHTHTGTRIPPQYILIIQNESGVTIVDVAKADFVEKTSQFILFRIVALDGGSPPRSTTFNLSVIVLDVNDNVPIF-LSPGGYAVSVVELGAPGTLVA---SVWATDADAGPNGQVTFRIESGGGDKLSI------------GPSDGIIRVAPGANIDRE-TRAAYTLMVVAVDRG--NPPLSGSAIVRVLVDDVNDERPAFLAPVQTVSVLESLSVGSFVATVKATENYKGHNTKYTYKIAGI-----GKNAFTVHATSGLVTST-RLLKSYERF-NLTAVATDHGRPPLWGQAGLYVEVLDVNDHR--PVFVLPPNGTVVNITEVMPVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATSGIISTARALDRESQAVYSLILLASDQGQ-PVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQ------------SFSIPEHSPPGTAVGNVSGAVDADVGANAIVYYFIAAGNEGNKFNLS-RWGLLVVLSDLDREVSPYY--AIIVKASSNP 2362 HSP 10 Score: 60.077 bits (144), Expect = 3.069e-9 Identity = 79/280 (28.21%), Postives = 122/280 (43.57%), Query Frame = 1
Query: 442 LKGIIRVEINVQDVNDNVPTFL----TSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNT-VTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKF--KQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR----------SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN----EFNANTKVVITVVDVNDEAPQFNLNP-------SFCRIEEGQPENIIIGQIT 1197
L G V + V DVND P FL T S+L+S+ VG + KA + K HNT TYK+ A I + F + T+ L K+ YER L +A P Q + + V+++ND P F V++ E +P+ I++V AVD DE R S D+ S + +S G I R LD E+ +++ + + ASD + + + + + D++D P F + P SF I E P +G ++
Sbjct: 2040 LSGSAIVRVLVDDVNDERPAFLAPVQTVSVLESLS-----VGSFVATVKATEN--YKGHNTKYTYKI-AGIGKNAFTVHATSGLVTSTRLLKS--YERFNLTAVATDHGRPPLWGQA---GLYVEVLDVNDHRPVFVLPPNGTVVNITEVMPVVIRIVEVLAVDGDEGQNGAVRYSFLHAGGVGSRDWESFRINATS-GIISTARALDRESQAVYSLILLASDQGQPVSYESTQPLQVVLDDIDDNEPVFIVLPDGGAPYQSFS-IPEHSPPGTAVGNVS 2304
BLAST of Protocadherin gamma vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008517.1 (pep scaffold:Pmarinus_7.0:GL476786:43429:129410:1 gene:ENSPMAG00000007697.1 transcript:ENSPMAT00000008517.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 194.512 bits (493), Expect = 1.406e-50 Identity = 199/761 (26.15%), Postives = 338/761 (44.42%), Query Frame = 1
Query: 256 RNLSEKINYRF-QKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLY-LVVNVWDG--LSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADF-SSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNE---FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDRE----ETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDI-FSIDPQIGILRVKRKLKKELIGD-YNVQIIVEDNGKPSKMHSQKILVRIQDILRLEE 2484
R + + Y+ + F +++ T + T+ +D EE +Y L V DG L + V I V D D PTF V E + L ++ + VTY + + +F ++ + + A+D E Y L + A + + S+++ V ++N+ P F + YEVS+ E+ P+NS V A D+D ++ E+ Y + + F + GQ++++ LD ET + + V A D +++ V +TV+DVND P FN + E Q ++G + D D+ + G +E K V F+ LDS+T G+ RV FDRE + +V DG PL T+ + + D+NDN P F K+VY S+ E+ ++++VTA+D D G NG + Y I+ E F +D+ +G +T LDRE+ + Y L++ A D GT P +SCT+ + ++D NDN P+F ++ E+ + G + L A+D D G +G + + ++ + F + GS+ A+ D ET Y L + D G+ P S + +++ D NDNPP + D E+I I G ++ A D D N H+ I+ P F+IDP+ G + ++ +E+ G + V + D P +H+++ ++ +L +E
Sbjct: 583 RGANGTVRYQLTAGDAARFQVNAVTGAVSTRVSLDREERA-----------VYQLQVTALDGGHLRARSPAIVTITVADAQDTPPTFARDDYSFVVFENV----APGTLVGSVSASTLDLNANVTYLIVSGDQRGSFSIEWSGGR---IFTANAIDREEQAFYQLRVVANSG---GVAGEASVSVLVHDVNNHAPVFDRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIFPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFE------KPQVNFE--LDSET--GRI-ASLRV-FDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVDEGVNGALRYAINE----GNEGGKFTVDASTGQITLLGSLDREETASYTLVVSATDSGTSP--LAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAIVAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPRSSATILVVHVRDFNDNPPAFLPGDVFASIM---------ENIPI--------GTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIP--VHTRRSALKNVTVLVTDE 1285 HSP 2 Score: 193.356 bits (490), Expect = 2.844e-50 Identity = 159/587 (27.09%), Postives = 258/587 (43.95%), Query Frame = 1
Query: 790 ITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNP-SFCRIEEGQPEN----IIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLY--------TRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXX-XXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPN----------HNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I V ++ND P F + E+ VEEN +I + A D D+ ++ +TY S F V ++ G + R LD E + +L+ V+ASD + ++ + V D ND +P+F+ + SF E+ P+ +IG + D DS + + P DS G + L+ TR DRE V + G L +T + + + D NDN P + + + E+ P +++++ATD D G N + + I S +PE F + +D G ++ LDRE++SFY L++ D+ P + SS + DVNDN+P F P+ E+ G V + A D D G N + + L + F T+ G ++ +E DRE Y L + D+G+ PL+ T T+ + + D NDN PR +Y + +I D E PG E+L+ A D DEG N + I+ + F +DP +G L V R L +E Y + + D G P++ + + V + D+
Sbjct: 1502 VEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSVLSGSEGAFVVDAASGVLRASRRLDREERASYLLTVRASDGTHATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADS-------------GPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTR-PLDRESRACYVLRARATDGGG-----LAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSIS---SGDPEGR-FAVGND-GQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALAPEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREY-------------EAAIAED----EPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDV 2047 HSP 3 Score: 174.096 bits (440), Expect = 2.829e-44 Identity = 194/674 (28.78%), Postives = 297/674 (44.07%), Query Frame = 1
Query: 457 RVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLP-----INSMIIQVEAVDEDED--SEITYRSA-----DFSSQYFSVSS-KGQIFLKRPLDFETTSLHLIDVQASDNE-FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKL----SCWEPRNLY---NKQAVIFKPPLDS--KTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNP---LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDN-----LRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKK---LEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKE 2373
+VEI+V+DVNDN P F + V+E G G+ + A D D ++ VTY + S + V + + +L + LD E Y L + A + T +++ V + ND P+F + Y V E+ ++I V A D D E+TY A D++ F + G + + RPLD E+ + +++ +A+D A ++ + V+D ND AP + + E P + +I+ D D E N +L S +P + N + LD ++FY +L RV DR A++P L+S + +SL + D+NDN P F +++ E++PV A V V A D D GRN V Y + F +++ +G V +LDRE Y L ++A DKG P TS+ T+ +T+ D NDN+P+F P++ I E+E PGTEV L A D DEG NG+L + + F L + G+L A+ DRE T Y L + D G S T +V + + DVND P Y TV T + P IL+ A D D G + + + ND FS+ P G + + R L +E
Sbjct: 1501 QVEISVEDVNDNPPVFAVPEMELEVEENT-GEGEVIFTLSATDAD-QGQNALVTYS----VLSGSEGAFVVDAASGVLRASRRLDREERASYLLTVRASDG---THATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGGLAATARLYVNVLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATD-DDEGVNAELEFSISSGDPEGRFAVGNDGQLSVARALDRERQSFY---NLVVRVS-DR------------------ARHPPARLSSAVRVSLILTDVNDNAPAFTSPRSALA-PEDSPVGAVVATVQAVDPDSGRNSYVEYALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPP--LTSTATLAVTVGDANDNAPRF--PRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDIASGDPTGDFRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASVRVTLSDVNDCSPAFQLSPY----------TVHARENT------QGPPVLILQVVARDDDLGSSGQVTYAAAGGNDGGAFSVSPD-GHVHLLRSLDRE 2120 HSP 4 Score: 172.555 bits (436), Expect = 9.129e-44 Identity = 177/687 (25.76%), Postives = 297/687 (43.23%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEH-NTVTYKLDADIYSDTFM--LKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAP--QFNLNPSFCR---IEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLT--IADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLE-IFENEKPGTEVGILIATDNDEGDNGKLLFKLLPN----HNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
V + V DVNDN P+F +++ + VG+ + L A+DRDV N YK+ + + VT +F L LD E Y LA+ A + + + +L + + V + ND P F++ Y SV E+ P+ + + ++ +R + F + G + ++PLDFE + + ++A+D + VI ++DVND P +F P R ++E + +T+ D DS ANG+LS V+ P + G L + DRE ++ + P+ + T SL + D+ND+ P F + Y+ ++ E P + V VTA D D G N + Y I + + F +D +G VT K+DRE S L I A+D+G PK T+ ++ +T++DVND P F K + EN PG V + A D+D G+NG + + P+ + E F ++ G + + K DRE + Y L ++ D+G PL T V + + D+NDN P ++P + S ++ E + A+D D G N ++++ D F ++ G + + L +E Y +Q+ D G + + + D
Sbjct: 9 VRVVVGDVNDNAPSFPEPGVMEVAFKEDAAVGRQVLLDTAVDRDVGPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFLHLATTGPLDREANPSYALAVQAEDGGSPRRYGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAAL-----------RDLLHRGRGPLAVPFDPKT-GMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVP-----GLRVLKVASQLDRERIPMYNLTILASDN----GKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLG----WFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPK--TAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDLGENGTVRYNFDPDMPAQYREMFRLDSLTGKVTTLKSLDREELEEYPLVVQAQDRGSPPLGSTAKVTVVVGDLNDN-----HPVFYPVQYFA--SILENEPGGT----------AVTTVTATDPDRGANGTVRYQLTA-GDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHLRARSPAIVTITVAD 650 HSP 5 Score: 149.828 bits (377), Expect = 9.569e-37 Identity = 162/602 (26.91%), Postives = 260/602 (43.19%), Query Frame = 1
Query: 307 FVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKS----MELQKAIDRDVSKEHNTVTYKL----DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE----DSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN------EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDRE-ETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGIL--IATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEIND 2046
FV+D+ + +L+ +D EE L V DG R+ + V+D NDN P F + V E GK+ + A D D S VTY L D+D F L + L + + LD E Y L A + +L + V++ ND P + V E+ P + ++++ A D+DE + E + S D + F+V + GQ+ + R LD E S + + V+ SD ++ +V + + DVND AP F +P E P ++ + D DS G+ S E L + + VR RE + + V + PLTST T+++T+ D NDN P F + Y +I E+ P +V++++A D D G NG + Y+I S +P F +D G + LDRE+ + Y+L + A+D G + T+S +T+ DVND SP F + P + EN + G V IL +A D+D G +G++ + ++ F ++ +G + + DRE ++ L I D
Sbjct: 1563 FVVDAASGVLRASRRLDREERA----------SYLLTVRASDGTHATDA-RLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDAD-SGPFGEVTYALAPSEDSDWADGAFGLHPVTGA---LNVTRPLDRESRACYVLRARATDGGGLAATARLYVN--VLDANDNAPSVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGR-FAVGNDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSAVRVSLILTDVNDNAPAFT-SPRSALAPEDSPVGAVVATVQAVDPDS----GRNSYVE-YALATDGEEGGGGAGAGPGPFALNTVTGEVRLVRELDREARQSYALTVLAVDKGRPPLTSTATLAVTVGDANDNAPRFPRREYEAAIAEDEPPGTEVLRLSAWDPDEGANGELRYDI---ASGDPTGD-FRLDPVLGTLAVARPLDRERTASYELAVRARDGGGPARSDTASV--RVTLSDVNDCSPAFQLSPYTVHARENTQ-GPPVLILQVVARDDDLGSSGQVTYAAAGGNDGGAFSVSPDGHVHLLRSLDREAQPQHVLIITATD 2133 HSP 6 Score: 147.902 bits (372), Expect = 3.952e-36 Identity = 198/773 (25.61%), Postives = 320/773 (41.40%), Query Frame = 1
Query: 214 KISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLS--LKGIIRVEINVQDVNDNVPT----FLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTN-DSFPILVLKKALDYERCKLYNLAIWAWNSPADNQK-----TKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ---YFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEF---NANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGS-LQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++ED P+ LR+L +R + L+ D T ++ T+ +D E Q L + DG + L G I + DVNDN P +L + + + G L D D + ++ + F+L +L + LD ER +YNL I A +DN K S+ + V ++ND P+F Y ++ E P S + V A+D D R + S +FSV S G + +D E S ++++ A D A T + +T++DVNDE P F E + + ++ D D NG + ++ + +F+ LDS T GK + T DREE + V PL ST +++ + D+NDN P+F Y SI EN P V VTATD D G NG V Y++ + + F +++ +G V+ + LDRE+ + YQL + A D G + + S + IT+ D D P F +FEN PGT VG + A+ D N + + ++ F + +G + +A DRE Y L++ N G ++ +V + + DVN++ P +F + S + ++ E A+D D G+N + I N + F I P G L V+ +L +E +Y++ + D G S + V + D+
Sbjct: 144 SVAEDSPVGAA--LRDLL----HRGRGPLA-VPFDPKTGMVSTRQPLDFEARR----------QYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILA----SDNGKPVARSATASLVVYVNDVNDHAPRFALSAYAAALSEGAPAGSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDVNDEPPLFTQTKYVATAVENSLPGLFVVSVSAADSDL-GENGTVRYNFDPDMPAQYREMFR--LDSLT--GK--VTTLKSLDREELEEYPLVVQAQDR---GSPPLGSTAKVTVVVGDLNDNHPVFYPVQYFASILENEPGGTAVTTVTATDPDRGANGTVRYQL-----TAGDAARFQVNAVTGAVSTRVSLDREERAVYQLQVTALDGGHL--RARSPAIVTITVADAQDTPPTFARDDYSFVVFENVAPGTLVGSVSASTLDL--NANVTYLIVSGDQRGSFSIEWSGGRIFTANAIDREEQAFYQLRVVANSGG---VAGEASVSVLVHDVNNHAP--VF---------------DRASYEVSIAEDEPVNSRFFSVRATDKDSGKNGEVKYEIGEGNGGEKFGIFPD-GQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDV 855 HSP 7 Score: 146.747 bits (369), Expect = 9.444e-36 Identity = 180/678 (26.55%), Postives = 293/678 (43.22%), Query Frame = 1
Query: 403 QLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFP--ILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSE--ITYRSADFSSQYFSVSSKGQIFLKRPLDFET------TSLHLIDVQASDNE----FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNH--NENFFYLTINGSLQSAKEFDRETTDR-YCLQIEINDQG---KTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKE 2373
QL +V N + G V + V DVN++ P F +S S+ E V +A D+D S ++ V Y++ + F + FP L ++ LD E + Y+L + A ++ + + +++ + V+++ND +P F Y E + S++ V+A D D S +TY + S G+I R D E + V A+D V + V DVND PQF + + E + ++T D D E NG L R N+ K +D+ T G+ L DREET V + +PL ++ T+++ + D NDN P F +++ SV E+ V +I +TA+D+D G +G V Y I + F ID +G V +LD E + Y+L + A+D G P+ +S+ + + + D NDN P F+ G I EN GT V + A D D NG+L + + +F +G + +A E DRE T + + + D+ T S V + + D NDN PR + P +I +D + + G + +ASD DE ENAA + ++ + +F +D + GI+ +L +E
Sbjct: 728 QLRVVANSG---GVAGEASVSVLVHDVNNHAPVFDRASYEVSIAE-DEPVNSRFFSVRATDKD-SGKNGEVKYEIGEGNGGEKFGI------FPDGQLYVRYELDRETREEYSLTVSAMDTGVEPLSSSVTVNVTVLDVNDNKPLFNSSSYVFHFCEEQEVGSLVGAVQATDADAGSNGGVTYSFEKPQVNFELDSETGRIASLRVFDREALIRQGGAASFSFSVVATDGGRPKPLQDRATVQVFVQDVNDNPPQFAKSVYQASVSESASNLTQLLRVTASDVD-EGVNGAL-----RYAINEGNEGGKFTVDAST--GQITLLGS--LDREETASYTLVVSATD---SGTSPLAASCTVAVQVLDENDNPPRFTESLLSVDALESTRVGELLITLTASDEDTGPSGDVRYAI----VAGNTHATFAIDRSTGSVFLARRLDFETQRLYRLNVSAEDGGRPPR--SSATILVVHVRDFNDNPPAFLPGDVFASIMENIPIGTRVITVTARDPDADVNGELHYSIARQFPPGAHFTIDPESGEICTAAEIDREVTGGLFEVTVRATDKAIPVHTRRSALKNVTVLVTDENDNAPRFVTP----------------TAILVD-GLRAAAGSVVGTLQASDPDEAENAAVRYAVTGGDAAILFRLDRRTGIIETSTELDRE 1358 HSP 8 Score: 137.502 bits (345), Expect = 5.481e-33 Identity = 106/367 (28.88%), Postives = 180/367 (49.05%), Query Frame = 1
Query: 1411 KNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTE-----VGILIATDNDEGDNGKLLFKLLPNHNEN-----FFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGK--PSKMHSQKILVRIQDIL 2472
+ P++S + +++ D+NDN P+F + +EEN + ++ATD D G+N LVTY + ++ + FV+D+ SG + A+ +LDRE+ + Y L + A D GT + +++ + D NDNSP+F ++ E+ P + +G ++A D D G G++ + L P+ + + F + G+L + DRE+ Y L+ D G L+ T + +N+LD NDN P +VQ +S+ ++ PG +L+ A+D DEG NA F IS + F++ G L V R L +E YN+ + V D + P+++ S VR+ IL
Sbjct: 1493 RPPMSSFNQVEISVEDVNDNPPVFAVPEMELEVEENTGEGEVIFTLSATDADQGQNALVTYSV-----LSGSEGAFVVDAASGVLRASRRLDREERASYLLTVRASD-GT----HATDARLSVAVRDANDNSPRFSRHAYSFDVAEDAAPDGKTTRAVIGTVLAGDADSGPFGEVTYALAPSEDSDWADGAFGLHPVTGALNVTRPLDRESRACYVLRARATDGGG--LAATARLYVNVLDANDNAP-----------------SVQNDSLAAEVPEDAPPGTSLLRISATDDDEGVNAELEFSISSGDPEGRFAVG-NDGQLSVARALDRERQSFYNLVVRVSDRARHPPARLSSA---VRVSLIL 1826 HSP 9 Score: 94.3597 bits (233), Expect = 9.832e-20 Identity = 120/480 (25.00%), Postives = 186/480 (38.75%), Query Frame = 1
Query: 1078 TKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQI----TIWDRDSEAANGKLSCWEPRNLYNKQAVIFKP-PLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI----GPKKLEIFENEKPGTEVGILIATDNDE-GDNGKLLFKLLPNHNENFFYLTING-----SLQSAKEFDRETTDRYCLQIEINDQGK-TPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
T+V + V DVND AP F P +E E+ +G+ T DRD NG N++ + P P+ + F L T DRE V + + +++T+ D NDN P FEK Y S+ E++PV A + +D+ R P F D +G V+ LD E Y L + A D G P ++ I + ++ ND + +F+ + + E+ PGT ++ TD D NG+L ++ + F L G L+ A + DRE Y L I +D GK S T ++ + + DVND+ PR + + E G + A D D G NA + I ND FS+D G++ K+ +E+ + I +D G K + V + D+
Sbjct: 7 TEVRVVVGDVNDNAPSF---PEPGVMEVAFKEDAAVGRQVLLDTAVDRDV-GPNGVNHHAYKIVSGNEEGRLVPPRPVTKRAFL---HLATTGPLDREANPSYALAVQAEDGGSPRR---YGRLQVNVTVQDANDNPPAFEKPAYRASVAEDSPVGAAL-------RDLLH-----------RGRGPLAVPF--DPKTGMVSTRQPLDFEARRQYTLSLRAADGGNPPLSGRATAVIQLLDVNDNDPAIRFVYLPPAARSASVDESAAPGTVAALVTVTDADSPTANGELSVSIVGGNERGHFVLHAPGVPGLRVLKVASQLDRERIPMYNLTILASDNGKPVARSATASLVVYVNDVNDHAPR---------FALSAYAAALSEGAPA--------GSYVKDVTAMDADSGLNAKLRYSIVSGNDLGWFSVDESTGLVTTDGKVDREVASSVVLNISAQDQGAQPKTAYTSLTVTLLDV 439
BLAST of Protocadherin gamma vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010725.1 (pep scaffold:Pmarinus_7.0:GL479425:26296:30457:-1 gene:ENSPMAG00000009713.1 transcript:ENSPMAT00000010725.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 167.548 bits (423), Expect = 1.254e-42 Identity = 196/772 (25.39%), Postives = 322/772 (41.71%), Query Frame = 1
Query: 334 LKTKTLIDLEELC---PDHC-PTGEMGQLYLVVNV-WDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDV---SKEHNTVTYKLDADIYSDTFML----------------KVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYE-VSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVSSKGQIFL-----------KRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFN--------LNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIF--------EKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-------KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL---TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKI 2448
L +D E LC PD C TG M + + G S ++ V++ V+D+ND+ P F + S+ E VG+ + L +AID D S +H ++ + F L +L L++ LD E Y L +W + + +TI VV+ ND P F V + E+ + + ++Q+ A D D + I Y F ++ S++++ + + LD ET +H + V A D +A+ V + + D ND AP F L +I E P + I++ D D G + R + A + P +K ++ L T D EE V+ G K L+ + + +++ DINDNTP+F + AVY VS+ EN P V+ + ATD D G NG +T+ + L LF ++ +G +T LDREK Y+L + A D G+ Q+ + + +T++D NDN+P F+G + + E GT VG + +D DEGDN ++ L+ ++ T G +++ DRE +Y L + D G+ LS + V I + D NDN P + P+ + TW T + + +S+ A+D+D G+N + I N IF ++ G L + R + G + + + V D G + +
Sbjct: 83 LSVALRLDREALCMEEPDACRSTGFMHTVQVAAMAKGQGSSNLRLLDVQLLVRDINDHAPAFRAPHLNVSISES-EAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAY---SFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDL----GSSGTVDVRLEFPTGAELASP---NKV---QFLLKTTRLLDYEEAQQYNVSVLAADR-GTPK--LSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGS--PQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSPNTND--TWKHVRTFSPAGMLVGVSV-----------TANDIDAGDNGRPLYEIIGGNPKGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRGGSGSRRVRAV 822 HSP 2 Score: 108.227 bits (269), Expect = 3.234e-24 Identity = 142/548 (25.91%), Postives = 235/548 (42.88%), Query Frame = 1
Query: 271 KINYRFQKQLSYFV------LDSNTSILKTKTLIDLE-ELCPDHCPTGEMGQLYLVVNVWDG--LSLKGIIRVEINVQDVNDNVPTF---------LTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLD----ADIYSDT---FMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQK--------YEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFS-----SQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQF--NLNPSFCR----IEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYD-----LYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVS---IEENNPVDAKV-IKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKG 1737
I Y F +L+ +D T ++ + L+ E P H LVV DG LS + V + + D NDN P F L +K V+ + G + L D D+ TV +L+ A++ S F+LK T + LDYE + YN+++ A + L++ I VV+IND P F YEVS+ EN P ++++ + A D D + IT+ ++ + ++ FS++ + GQ+ L PLD E + + V+A D + A V +TV+D ND AP F N + C +EE +G ++ D D E N +++ NL + G D + T V DRE+ + V V + + L+++ +S+T++D NDN P+ + + + +P V + VTA D D G NG YEI NP K +F++++DSG ++ + E ++L++ +D+G
Sbjct: 307 AIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVH---------RLVVVARDGGQLSRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSG--TPVVLISVSDPDLGSS-GTVDVRLEFPTGAELASPNKVQFLLKTT----------RLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLD-EGDNARVAL----NLVREAG--------PDWIGGAGDTPGGVVRTLVVLDREDRVQYELSVRAVD---SGRPALSASCRVSITVSDTNDNAPVITSPNTNDTWKHVRTFSPAGMLVGVSVTANDIDAGDNGRPLYEIIG---GNP-KGIFLLNADSGALSLARTVSSLDEGLHRLVVRVRDRG 812 HSP 3 Score: 106.686 bits (265), Expect = 9.856e-24 Identity = 103/379 (27.18%), Postives = 176/379 (46.44%), Query Frame = 1
Query: 1408 AKNP-LTSTMTISLTIADINDNTPIF-EKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDN-LRSMNPEKSLFVIDSDSGWVTA--TLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF---------IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKL-LPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYE-------SPGFEILKCEASDLDEGENAAFHFRIS-LPND---PDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
NP L+ ++ +++ + D NDN P+F + V I E++ V V+++ A D D G NG + Y L S+ + +L V D +G VT KLDRE ++L++VA+D G + +++S T+ + + D NDN+P F + ++I EN GT V ++ +D D G +G + +L P E + L++ + D E +Y + + D+G LS + I+++D+NDN P + P SI D+++YE G +L A+D D G N A F +S L ++FS++ + G L + L +E Y + + D G P + + V + D
Sbjct: 247 GGNPKLSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHV-DGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQL--SRSASVTVTVELNDDNDNAPVFEVIALQGEYLPDGGVKIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEFPTGAELASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNP----------------ASIEGDVAVYEVSLRENGPAGTVVLNLLATDADSGPNGAITFTLSELAGGESVAELFSLNMRTGQLTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLD 606 HSP 4 Score: 82.8037 bits (203), Expect = 2.785e-16 Identity = 98/376 (26.06%), Postives = 162/376 (43.09%), Query Frame = 1
Query: 1432 MTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLF-VIDSDSGWVTATL------------------KLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP--KKLEIFENEKPGTEVGILIATDNDEGDNGKLLF----KLLPNHNENFFYLTINGSL---QSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYES--PGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ + L + DIND+ P F +VSI E+ V +V A D D G N + Y I + F +++SD + +LDRE Y+L++ +D G PK + S + I ++D NDN+P F+ P + + I E+ K GT V L A D D G NG + + KL + ++ L ++A++ DRET + L + D G+ S + TV + + D NDN P +F + ++ + V+ I E+ G ++ SD D G + R+ P ++ S + +L+ R L E YNV ++ D G P +++ + DI
Sbjct: 128 LDVQLLVRDINDHAPAFRAPHLNVSISESEAVGRRVPLPRAIDPDAGTNSIQHYRISAASGDGLQLGPFSLVESDDDDDGGGVGVDGDGGMGHRALLELREQLDREAVPSYELLLWGEDGGN-PK-LSGSVLLTIVVVDANDNAPVFVDPPTRPVRITEHSKVGTSVVQLRAADPDAGPNGAIAYSFHTKLTSLATQAALHVDGTTGLVTVRNAEKLDRETMPVHRLVVVARDGGQLSRSASVTVTVELNDDNDNAP--VFEVIALQGEYLPDGGVK---------IVENLPSGTPVVLISVSDPDLGSSGTVDVRLEFPTGAELASPNKVQFLLKTTRLLDYEEAQQYNVSVLAADRGTPKLSKLLNLIISVVDI 490 HSP 5 Score: 50.447 bits (119), Expect = 2.482e-6 Identity = 86/380 (22.63%), Postives = 159/380 (41.84%), Query Frame = 1
Query: 214 KISEDVPLSTQMILRNLSE-------KINYRFQKQLSYFVLDSNTS--ILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILK---SVKEVIY---GVGKSMELQK-AIDRDVSKEHNTVTYKL----DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKF------KQQKYEVSVEENLPINSMIIQVEAVDEDEDSE-------ITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQF---NLNPSFCRIEEGQPENIIIGQITIWDRDSEAA-NGK 1233
KI E++P T ++L ++S+ ++ R + + N +LKT L+D EE + + ++ L ++ + I+V D+NDN P F+ + ++ +V EV G ++ L A D D S + +T+ L + ++ F L + L L LD E+ Y L++ A + + +K + + + V++ ND P F Y+ VEE + + + V D DE + D+ + G + LD E + + V+A D+ +A+ +V ITV D ND AP N N ++ + P +++G +++ D +A NG+
Sbjct: 400 KIVENLPSGTPVVLISVSDPDLGSSGTVDVRLEFPTGAELASPNKVQFLLKTTRLLDYEE--------AQQYNVSVLAADRGTPKLSKLLNLIISVVDINDNTPVFMNPASIEGDVAVYEVSLRENGPAGTVVLNLLATDAD-SGPNGAITFTLSELAGGESVAELFSLNMRTGQ---LTLATPLDREKRMRYELSVEACDGGSPQRKARAIVRVTVLDENDNAPTFVGVSNSTNCMYQFFVEEETSVGTYVGTVSTSDLDEGDNARVALNLVREAGPDWIGGAGD-TPGGVVRTLVVLDREDRVQYELSVRAVDSGRPALSASCRVSITVSDTNDNAPVITSPNTNDTWKHVRTFSPAGMLVG-VSVTANDIDAGDNGR 765
BLAST of Protocadherin gamma vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004043.1 (pep scaffold:Pmarinus_7.0:GL479143:9150:31231:-1 gene:ENSPMAG00000003698.1 transcript:ENSPMAT00000004043.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 164.081 bits (414), Expect = 4.163e-41 Identity = 169/675 (25.04%), Postives = 296/675 (43.85%), Query Frame = 1
Query: 454 IRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKL-DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLT-INGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQ 2463
+++E++V D+NDN P F +S V E +++ + A+D+D S + V Y + D +I + + +V +S I + LD E Y L + A + + Q + + I V + ND P+F Q + V E+ + +++V +D DE ++ IT+ D S + S G+I + R L+ E S + + V+ASD + +T V I V DVND AP+F + E ++ +++ D D + ANG++ + Q F+ DS + L R + K +V + PL+S T+++ I N N P F + YS + +++ ++A D D NG + Y + + F +D+ G++ L + S + + + A+D+G P +S T I++ + N +P+F P +L + EN G+ + + ATD D G NG +++ + F ++ +G + E D ET Y L + D G + V I++ DVNDNPP L DY+P +N+ + +D +SP + LD+GE D+F ++ + G+L + L E Y ++ V P H V +Q
Sbjct: 320 LKLEVDVLDINDNAPEFSSSRFWAKVPENT--PPRTIVVLTAVDKD-SGINGQVDYSIIDGNIGN---VFRVNPNSGEIRSVST-LDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQ-IFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDAD-DGANGQVFFF-----MRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNA----SRRFDVDA-GGFLHLRASLAGDAGSIFSVTVEARDRGRPP--LSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYP--VIPENAPSGTTVLVMDAVDADSPSNAVTM---YSLDDGEA-------------DLFVLNQKTGVLTTQGFLDYETKQTY--ELTVRAFNYPDTFHYSTAQVHVQ 953 HSP 2 Score: 151.369 bits (381), Expect = 3.351e-37 Identity = 155/580 (26.72%), Postives = 253/580 (43.62%), Query Frame = 1
Query: 787 SITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNE----FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLS-----------CWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN-GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++T+ V + ND P+F + +V E+ PI S + V A D D ++ I+YR + S GQI LD E ++++V A D +++ +V+ V DVND P+F P P + +T D D+ NG L +PR A + P D DL VR DG A P ++ T+++ D + P F S S E+ P + V A + R G V+Y + + ++ +F +D SG V+ LD E + Y+L++ A+D G P ++ + + ++D+NDN+P+F + ++ EN P T V +L A D D G NG++ + ++ + N F + N G ++S DRE Y L ++ D+G T V I++ D NDN PR +T I ++ V++++ GF +L+ D DEG NAA F + P+ P FSI P G + V R+L +E Y V++ D P+ S + + + D+
Sbjct: 11 TVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYRLRGGDGHFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADA-GPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPRD--------DLTLTVRVS----------------DGGAP-PRSAVTTVTVRFRDAGE-FPRFAPGPRSFSFREDQPPGTTITVVAA--RSSRRAGPVSYHLASGGNLG---DVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPF--SAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIV-VLTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPR---------FTQIFSAHVREDAAV---------GFPVLRVSTLDADEGPNAAITFSLLDPSLP--FSIHPSTGEITVSRRLNREDRSGYAVKVRASD---PAWTVSTDVTIVVDDV 532 HSP 3 Score: 130.568 bits (327), Expect = 9.273e-31 Identity = 170/678 (25.07%), Postives = 282/678 (41.59%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKA-IDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYR--SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTK---VVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLT---STMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEI-DNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPK----QQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN---GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGEN-AAFHFRISLPNDP---DIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKP 2424
V IN+ N N P FL V + + +++ DRDV+ + + Y + S F + D+ L L+ +L + ++++ + A + ++ + I V N P+F E+S+ EN P S + +V A D D + I Y S D S + + G + L LD+ET L+ + V A+D + A T+ V I+V DVND P N + + I E P + + D DS + + +L + +A +F L+ KT L T+ D E V A P T ST + + I +N+ P F + Y+ + E+ PV A V V ATD+D G +G V Y + RS F ++ +G + + +LDRE+E+ L ++AK+ G++ + + I +S + G + E GT V + A D D G F L +IN G + A DRE+ Y L + D G+ P + T V + + DVNDN P L+ + + ++ + G +L EA D D N + F++ L +DP FS+ G+L+ R + +E ++++ + + D G P
Sbjct: 637 VTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQ---IAYSVVGGNASRRFDV----DAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTM-----YSLDDGEADLFV--LNQKTGV----LTTQGFLDYETKQTYELTVR------AFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKG-----FSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDANDPPVFSSALYHG----RVSEAASVGTHVVGVSAHDFDS-PPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDVNDNGPFLL-------------------TSSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQL-LGSDPAWRGYFSLS-SSGLLKTARPIDREQKPEFHLPVAIADAGSP 1259 HSP 4 Score: 127.872 bits (320), Expect = 5.252e-30 Identity = 160/690 (23.19%), Postives = 274/690 (39.71%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSF------PILVLKKALDYERCKL--YNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDED--SEITYRSADF-SSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQ-QTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN-GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCIN--ILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGEN-AAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
V I V DVNDN P F ++ E G + A D D + + S T +V DS P+ A L Y+ + A + + ++TI +V N P+F +++Y V + + I+ + AVD D D +I Y +S+ F V + G + L+ L + S+ + V+A D ++ +I+V + N AP+F P + E P + ++T D D+ NG + +Y+ + D G L + ++ E+ + T +S+++ D+NDN P+ + Y I EN P V+ + A D D N + Y +D+ E LFV++ +G +T LD E + Y+L + A + P S+ +++ I VN+ P+F+ + + E+ G VG + ATD D G +G + + L F + + G + + + DRE L++ + G V +N I D ND PP YH + +S S G ++ A D D F F I N FSI+ G++ V L +E + YN+ ++ D G+P + ++V ++D+
Sbjct: 525 VTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARV-SASDADDGANGQVFFF-----MRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPPLSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHPPLELSLPENHPAGSSLARVTATDTDA-GVNGAI-------VYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAAD-----GGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDG-----EADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFN---YPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAGIDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDREREASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGR-----------------VSEAASVGTHVVGVSAHDFDSPPGWRTFSFLIQSGNAGRAFSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTTVVVVALEDV 1169 HSP 5 Score: 127.872 bits (320), Expect = 6.551e-30 Identity = 142/575 (24.70%), Postives = 245/575 (42.61%), Query Frame = 1
Query: 466 INVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTF-MLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEIT--YRSADFSSQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQA---SDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKY---------------DLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDN-GKLLFKLLPNHN--ENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNP 2115
I+V + N P F + S+ E + G S+ A D D + + Y + + S F + + + D ++L LDYE KLYNL++ A + + ++I V ++ND P Y + EN P + ++ ++AVD D S Y D + F ++ K G + + LD+ET + + V+A D + +V + + VN+ P+F + E P +G + DRD+ +D FY + ++ + DRE +I + G+ + + +++ I D ND P+F A+Y + E V V+ V+A D D G T+ ++S N ++ F I++ +G + LDRE Y L +VA D G P T+ + + ++ +++ F+ ++ EN+ G V L A D D N G F+LL + +F L+ +G L++A+ DRE + L + I D G PL+ T T+ +++LD NDNP
Sbjct: 743 ISVTEENQYAPRFAHPPLELSLPE-NHPAGSSLARVTATDTDAGV-NGAIVYSIASGDGSGLFDISRASGD----VLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDVNDNPPMLNASDYYPVIPENAPSGTTVLVMDAVDADSPSNAVTMYSLDDGEADLFVLNQKTGVLTTQGFLDYETKQTYELTVRAFNYPDTFHYSTAQVHVQITGVNEYFPRFVQREYNFVVSESAPVGAPVGSVFATDRDAG-------------------------IDGTVFYMLFGESRSKGFSVNEHTGEIIVSSQLDRER-EASATLRVIAKNAGSIRGFDVDEVLVNVAITDAND-PPVFSSALYHGRVSEAASVGTHVVGVSAHDFD-SPPGWRTFSF-LIQSGNAGRA-FSINAHTGLIVVASPLDRESVPLYNLTVVAVDMGEPPATGTT---VVVVALEDVNDNGPFLLTSSAKVTENQPAGMTVLNLEAGDPDLPPNKGPYTFQLLGSDPAWRGYFSLSSSGLLKTARPIDREQKPEFHLPVAIADAGSPPLTSTVTLHLSVLDQNDNP 1278 HSP 6 Score: 125.176 bits (313), Expect = 3.934e-29 Identity = 155/630 (24.60%), Postives = 259/630 (41.11%), Query Frame = 1
Query: 442 LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNS-PADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVND--EAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSE---------AANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHF 2286
L G V + V+D NDN+P F + + +V E +G + L A D D + ++Y+L F + N S ++ +LD E + Y L + A + P + ++ + V ++ND P+F Y + P + + V A D D + ++ + + +S FSV +G I R L L L V+ SD + V V D E P+F P E QP I + R S A+ G L + + + + + LD + + Y+L R + P ++ + + + + DINDN P F + + + EN P V+ +TA DKD G NG V Y I + N +F ++ +SG + + LDRE + Y+L + A D+G+ Q + + I++ D NDNSP+F + E+ G V + D DEG N + F LL + + F G + ++ +RE Y +++ +D T ++ V I + DVNDN PR Y+ ++ + E++ + + ASD D+G N F
Sbjct: 6 LTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAP-IGSDVALVNATDADAGL-NAIISYRLRGG--DGHFSV---NPSTGQIITTASLDREGRESYVLEVTALDGGPTPGLSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARALQGPRDDLTLT-VRVSDGGAPPRSAVTTVTVRFRDAGEFPRFAPGPRSFSFREDQPPGTTI--TVVAARSSRRAGPVSYHLASGGNLGDVFAVDPQSGEVSVHR-ALDHE-YQHHYELVVEAR-------------------DSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGN----VFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGS--PTQHCTVKVLISVTDENDNSPRFTQIFSAHVREDAAVGFPVLRVSTLDADEGPNAAITFSLL-DPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVRASDPAWT---VSTDVTIVVDDVNDNAPRFGQTAYYIEFP----EPSEGEAL-------------VARVSASDADDGANGQVFF 576 HSP 7 Score: 123.635 bits (309), Expect = 1.128e-28 Identity = 141/612 (23.04%), Postives = 259/612 (42.32%), Query Frame = 1
Query: 694 LKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFS-SQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEF---NANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPL-TSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESF---------YQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYES--PGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ +ALD+E Y L + A +S L + + V++IND P+F ++ V EN P ++++ + AVD+D + ++ Y D + F V+ + G+I LD E + + + V+A+D + KV+I+V D ND +P+F S + E + +++ D D E N ++ + P L ++ R +RE+ KV A +P T + +++ + D+NDN P F + Y + E + +A V +V+A+D D G NG V + M + F + DSG + + L + Y ++ A D+G P +S T+ I I+ N N+P+F+ + + + GT + + A D D NG++ + ++ + F + G L + + + +E D+G+ PLS T I++ + N PR P ++LS+ E+ G + + A+D D G N A + I+ + +F I G + + +L E YN+ + D G +K + + + D+
Sbjct: 290 VHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDINDNAPEFSSSRFWAKVPENTPPRTIVV-LTAVDKDSGINGQVDYSIIDGNIGNVFRVNPNSGEIRSVSTLDRENVASYELTVKATDRGSPTQHCTVKVLISVTDENDNSPRFTQIFS-AHVREDAAVGFPVLRVSTLDAD-EGPNAAITF-----------SLLDPSLPFSIHPSTGEITVSRRLNREDRSGYAVKVR-------ASDPAWTVSTDVTIVVDDVNDNAPRFGQTAYYIEFPEPSEGEALVARVSASDADDGANGQVFF------FMRSQTENFRVGRDSGEIHSVRPLRYRDPAGGGSGANLNKYSFVVTAMDRGRPP--LSSDATVTINIVVPNANAPRFLRERYSTPVAATVRAGTRILDMSAVDPDRDVNGQIAYSVVGGNASRRFDVDAGGFLHLRASLAGDAGSIFSVTVEARDRGRPPLSSRATAIISVTEENQYAPRFAHP-------------------PLELSLPENHPAGSSLARVTATDTDAGVNGAIVYSIASGDGSGLFDISRASGDVLLVGELDYETEKLYNLSVCAADGGWQAKTECSGVSISVTDV 853 HSP 8 Score: 115.161 bits (287), Expect = 4.554e-26 Identity = 100/356 (28.09%), Postives = 155/356 (43.54%), Query Frame = 1
Query: 1405 AAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKP-GTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
A + LT T T+++ + D NDN P F A ++ E+ P+ + V V ATD D G N +++Y LR + F ++ +G + T LDRE Y L + A D G P +SS T+ + + DVND++P+F+ + + P GT V + A D D G NG L F L + + F G + +A+ + D L + ++D G P S TV + D + FP + P + + PG I A ++H S N D+F++DPQ G + V R L E Y + + D+G P K+ V + DI
Sbjct: 1 AGEPRLTGTGTVTVLVEDENDNLPRFGAAELRAAVPEDAPIGSDVALVNATDADAGLNAIISYR---LRGGD---GHFSVNPSTGQIITTASLDREGRESYVLEVTALDGGPTPG-LSSSATLVVAVTDVNDHTPRFLNAPYVAYAPSSAPAGTAVFAVTARDADAGPNGDLRFSLSGSASAGFSVDPRRGVIHAARAL-QGPRDDLTLTVRVSDGGAPPRSAVTTVTVRFRDAGE------FPRFAPG------------PRSFSFREDQPPGTTITVVAARSSRRAGPVSYHL-ASGGNLGDVFAVDPQSGEVSVHRALDHEYQHHYELVVEARDSGFPPFSAYLKLEVDVLDI 329
BLAST of Protocadherin gamma vs. Ensembl Nematostella
Match: EDO46189 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQM0]) HSP 1 Score: 229.18 bits (583), Expect = 2.421e-61 Identity = 210/730 (28.77%), Postives = 333/730 (45.62%), Query Frame = 1
Query: 307 FVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDG--LSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS--EITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLP-NHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
F +D T + T+ +D E + L +N DG + V I++ D NDN PTF S ++ G + A DRD+ + VTY + + ++F L + IL ++ LD E Y L + A ++ + Q SI + V+++ND P+F++ + + E+ ++S ++QV+ D+DE S IT + S F++ S G + K PLD+ETT+ + + V A D +A +V IT+++VND P F I E N + ++ D D + + FK +D + + R DRE T + V+ + G+ + + TI + D+NDN P+F Y+ S+ EN P+ V KVTATD+D G N VTYE+ S+ + S F ++ +G VT LDRE ++ Y L + A D G Q++ I +TI D+NDNSP+F K L + EN G+ + ++A+D D G NG++ + ++ NH F + G + DRE Y L I D G P T V I + D NDN P IF Y ID E ++I G + A+D DEG NA + I + D F+I+ G+L VK+++ +E + Y + I D G P +++ V + D+
Sbjct: 733 FAMDRFTGEITTRVPLDRETIA----------SYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPSRFNISED--SPTGTRVGQLTATDRDIGP-NGAVTYAIISGNQGNSFQLDPRSG---ILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSDGTPLTFDI-------VEGNAGSSFK--IDQSSGL----ISVAKRLDRE-TTANYTLVVRATETGSQGESVYNNATIR--VLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYEL----SVG-DTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHG--KPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSP--IFASNETSY-GID------EGVSI--------GSRVAVVTATDRDEGSNAQVFYSI-VRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDV 1405 HSP 2 Score: 220.32 bits (560), Expect = 1.424e-58 Identity = 209/683 (30.60%), Postives = 323/683 (47.29%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITY------RSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNE---FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKL-EIFENEKPGTEVGILIATDNDEGDNGKLLFKLL-PNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
V I +QD+NDN P F + + V E G + A D D S + V Y L + +D F + N S ++ LK LDYE+ Y + + A + ++ + + + V ++ND P+F + Y +V ENL + V A D D + +I+Y + F+ F+ G+I + PLD ET + + + + A D F A T V I++ D ND P F PS I E P +GQ+T DRD NG ++ + Q F+ LD ++ L R DRE TI V+ D G+ + +T+++ +S + D+NDN P FEK+++S I E+ V + V++V DKD G NG +T + S N F IDS +G+V + LD E + YQL + A+D G+ K T+ I I ++ N P F+ P ++ I E+ T V L ATD+ D L F ++ N +F +G + AK DRETT Y L + + G S+ + I +LDVNDN P + P + K S+ +L I G + K A+D DEGENA + +S+ D F ++P G++ KR L +E Y++++ D+GKPS+ I + I D+
Sbjct: 569 VTIALQDINDNSPIFQGPYVFR-VSES-SSPGHQIGQVAATDADDSSNGD-VRYALSDN--TDVFSI---NTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFT----GEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFT-GPSRFNISEDSPTGTRVGQLTATDRDI-GPNGAVTYAI---ISGNQGNSFQ--LDPRSGI----LSVRSTLDRE-TIPSYTLVVKASDAGSPQQSITASIHVS--VLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDN-----FTIDS-TGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNV--PSFVSPAQVTSIPEDVAINTHVVKLNATDS---DGTPLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAP-VFNPGSYAK------------SLHENLPI----GQTVAKVTATDRDEGENAKVTYELSV-GDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDL 1196 HSP 3 Score: 217.238 bits (552), Expect = 1.581e-57 Identity = 212/775 (27.35%), Postives = 344/775 (44.39%), Query Frame = 1
Query: 169 KYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQ--DVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR--SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANT---KVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++ I E+ P TR+G+++ + + I N + Q + F LD + IL ++ +D E + P + LVV D S + I I+V DVNDN P F S ++E S LQ ++ + +T L + SD F + DS ++ K LDYE Y L + A + + ++ + I ++N+ND P F S+ E++ IN+ ++++ A D D + +T+ + S + S G I + + LD ETT+ + + V+A++ + I V+DVND AP FN + E P + ++T DRD E N K++ +K V L + T+ DRE+ +V + K ++ I+LTI D+NDN+P F ++ Y++++ EN + +++V A+D D G NG VTY I + N F IDS +G +T +DRE + Y L I AKD G P S+ + IT+ D NDNSP F + I E G+ V ++ ATD DEG N ++ + ++ F +NG L KE +RET Y L I +D+G ++ + + + DVNDNPP Y + ++ Q S +L A D D G NA + I ND F I+ G++ L E Y +++ D+ +K + ++ + DI
Sbjct: 795 RFNISEDSPTGTRVGQLTA----TDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETI-PSYT---------LVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIRE--DASVHSTVLQVKVEDKDEGSNGAITLSLSGE-GSDNFTI----DSTGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTHVVKLNATDSD-GTPLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRD-EGENAKVTYELSVGDTSKFEVNPATGL----------VTTKRPLDREDQASYSLRVTAMDH---GKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNA----FRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPP--WVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSY---IGSVRENSAQSTS--------------VLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVINLNDI 1510 HSP 4 Score: 191.43 bits (485), Expect = 1.874e-49 Identity = 211/775 (27.23%), Postives = 349/775 (45.03%), Query Frame = 1
Query: 205 RIGKISEDVPLSTQMILRNLSEKINYRFQKQL------SYFVLDSNTSILKTKTLIDLEE-----LCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYR--SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNE---FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++ I EDV ++T ++ N ++ + S F +D ++ ++ +D E L TG G+ +V++ +++ V DVNDN P F S KS+ E + +G+++ A DRD E+ VTY+L DT +V N + ++ K+ LD E Y+L + A + +Q +IT+ + ++ND P+F Q KY ++V EN S I++V A D D + +TY S + + + S+ G+I + +D E + + + + A D+ + + V ITV D ND +P F N + I+EG + +T DRD E +N ++ Y+ I + + + T + ET+ I D G+ +TS +++ + D+NDN P+F Y S+ EN+ V+ V A D D+G N ++ Y I S N EK F I+S SG + T LD E++S Y L + A D + T+ + I +I++ND +P F + EN T V + A+D D G L + ++ + + F + +G + +A DRE Y +Q+ + D G PLS V I ILD NDN P+ F + ++NS +P K A+D DEG NA + +S D F I G++ + + L +E Y++ I D+G P + S I V + DI
Sbjct: 1002 QVTSIPEDVAINTHVVKLNATDSDGTPLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGSQGE-----SVYNNATIR--------VLDVNDNAPVFNPGSYAKSLHENLP-IGQTVAKVTATDRD-EGENAKVTYELSV---GDTSKFEV-NPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRD-EGSNAQV-------FYS----IVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPM--MTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSI---ISGNDEKR-FKINSTSGVIMTTTPLDFEEKSQYGLEVTATDS-----KYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDS--FGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPK--FDSSSYSSSILENS---------------APSSFSFKLAATDADEGTNARITYNLSR---NDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDI 1712 HSP 5 Score: 191.43 bits (485), Expect = 2.098e-49 Identity = 194/683 (28.40%), Postives = 313/683 (45.83%), Query Frame = 1
Query: 445 KGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKL--EIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN-GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
KG V I+V+D NDN P F +S + +++E + + A DRD S + +TY L + + FM+ N + LD+E Y + I A+ D + T I V ++ND P F Y+ V E++ + S++ Q+ AVD D ++ ++Y + YF+V S+G I K D ET + + + ++A D + V I ++DVND P F S + E++ IG + S+ NG + R + LD+ T G + + F++ + V PLT T + + + DINDN P+F + Y ++EN P +V+ATD+D NG + + I + +F ID +G ++ D E ++ Y L + A+D+G K T+ I I DVND+SP F P +I E+ G+ V + ATD D G G+L ++L+ + + F + N GS++ + E DRETT Y LQ+E D G T S + V I + D+NDN P P Y + +S SPG +I + A+D D+ N R +L ++ D+FSI+ G++ +K +L E Y V + +D G PS+ + V + D+
Sbjct: 51 KGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAA--QVAIVTATDRD-SGTNAAITYSLFSG--ENKFMM---NSKTGEIRTVTPLDHETKDSYTMRISAF----DGKHTTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVF----SSAQYTASVDEDVAIGAAMVTVTASDKDNGN--NADLRYSFTSGNTNHAFTLDAVT--GVVTVSRSLDFEQRSSYALGLSVTDR-----GSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT---QVSATDRDSSTNGALVFGI----IKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQV--TIFIEDVNDHSPVF-SPSNYSKQIPESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGP-----YVF-------------RVSESSSPGHQIGQVAATDADDSSNG--DVRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDV 678 HSP 6 Score: 186.037 bits (471), Expect = 8.688e-48 Identity = 207/768 (26.95%), Postives = 329/768 (42.84%), Query Frame = 1
Query: 223 EDVPLST---QMILRNLSEKINYRFQKQL-----SYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ---YFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFNA---NTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKL---EIFENEKPGTEVGILIATDNDEGDNGKLLFKLLP-NHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
EDV + + Q+ +L IN R L SYF +DS +++TK D E T Q+ L S G VEI + DVNDN P F ++ SV E + +G +M A D+D + + + Y + + F L ++ + ++LD+E+ Y L + + + + I V +IND P F Y+ V+EN P + QV A D D + F++ S G I + + D+E + + + VQA D +V I + DVND +P F+ + +I PE+ +IG + ++ +G E R + F +S + +L DRE T +V +S+ +++ + DINDN+PIF+ Y + E++ ++ +V ATD D NG V Y +++ +F I++ +G +T +LD EK++ Y + + AKD GT ++S + + + DVNDN P+F K L + EN G V + ATD D G NGK+ + +L N N F G + + DRET Y L I +D TV I+I D NDN P P + ++S T G + + A+D D G N A + I N + F +DP+ GIL V+ L +E I Y + + D G P + + I V + D+
Sbjct: 179 EDVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQ-GVIRTKGAFDRE--------TKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDV-AIGAAMVTVTASDKD-NGNNADLRYSFTSGNTNHAFTLDAVTG---VVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT---QVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQI----PESTVIGSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSEL------DRETTPSYSLQVEARD---GGSTSRSSSTRVTIALQDINDNSPIFQGP-YVFRVSESSSPGHQIGQVAATDADDSSNGDVRY------ALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGT--PSRSSLTVVKVMVDDVNDNPPQF--AKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPSRF---------NISEDSPT---------GTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDV 887 HSP 7 Score: 182.57 bits (462), Expect = 1.017e-46 Identity = 172/574 (29.97%), Postives = 270/574 (47.04%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSS---QYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAA------NGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLE--IFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYH 2142
V I V D NDN P F ++ + E + +G + + A DRD + V Y + + DT + N +L +KK ++ E Y L I A + + + +T+ V ++ND P F Q Y SV EN ++ ++ V A D D + R + S + F + S+ G I PLDFE S + ++V A+D+++ A T V I V+++ND P F + E P + + +++ DRDS + GK S + ++ + +I + + Y + RV A PL++ +++ I D NDN+P F+ + YS SI EN+ + K+ ATD D G N +TY + F+I + SG +T LDRE +S Y L I A+D GT P Q SS TI +T+ID+ND+ P I L + EN+ T V ++A+D D G N +L F LL N +++ F L G + + DRE Y L+I + D+G LS V I+++D +DN PR +Y+
Sbjct: 1294 VAITVADENDNSPIFASNETSYGIDEGV-SIGSRVAVVTATDRD-EGSNAQVFYSI---VRGDTSAFAI-NAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRDSFGSLSYSIVGGKDS--DKFSIDQRSGIISTADVLDRELVSLYAIQVRV-------------------TDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNL-------SRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPP--QASSITIRVTVIDINDHRP-LINSSSLRGSVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYN 1830 HSP 8 Score: 177.563 bits (449), Expect = 3.708e-45 Identity = 178/615 (28.94%), Postives = 281/615 (45.69%), Query Frame = 1
Query: 646 DTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLE--IFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGS---LQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
D M + + + I + D E Y L + A ++ K + + I V + ND P+F Y ++ EN P + I V A D D ++ ITY +++ S G+I PLD ET + + + A D + + ITV DVND AP F L+ + E I+ Q+T D D N +LS +L + F +DS+ + T+ FDRE T + + D G+ + T+ + I D+NDN P+F A Y+ S++E+ + A ++ VTA+DKD G N + Y + S N + F +D+ +G VT + LD E+ S Y L + D+G+ P TS + ++ +++P P + + EN GT+V ATD D NG L+F ++ +++ F TI+GS + AK D E RY L ++ D+G T V I I DVND+ P + P + K I STV G ++ A+DLD G +R+ N F+ID G +RV +L +E Y++Q+ D G S+ S ++ + +QDI
Sbjct: 8 DQGMFTIDSSTGSITTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAI-VTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVTPLDHETKDSYTMRISAFDGKHTTFVPL-ITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDV-GINARLSY----SLVSGDTSYFT--VDSQGV-----IRTKGAFDRE-TKASYQVALRAQDGGSPSR--SGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRY---SFTSGNTNHA-FTLDAVTGVVTVSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHL---LINVNDINDNPPVFSPSAYQSRVKENTPAGTQVS---ATDRDSSTNGALVFGIIKGNDDGVF--TIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSP-VFSPSNYSK--QIPESTVI--------------GSTVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDI 576 HSP 9 Score: 164.466 bits (415), Expect = 4.744e-41 Identity = 177/696 (25.43%), Postives = 304/696 (43.68%), Query Frame = 1
Query: 439 SLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS--EITYRSADFSSQYFSVSS-KGQIFLKRPLDFETTSLHLIDVQASDNE---FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSE-AANGKLSCW------EPRNLYNKQA--VIFKPPLD--SKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFE--ILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
S + + + + D+NDN P F S +V E G ++ A D D + + VTY + + + + F + T ++ +D E YNL I A +S + + I V + ND P F + ++E + I S + V A D DE S ++ Y + F++++ G + +K+ ++ ET + + ++ASD ++ ++ + V DVND P FN + E ++ + +T+ DS+ AN L E R N + ++ PLD K+ YG T ++ T+ +++ + ++ND TP F + Y+ S+ EN+P V+KV+A+D+D G ++Y I + + +K F ID SG ++ LDRE S Y + + D G P + TI I + N SPKF I EN P + L ATD DEG N ++ + L + N+ F +G + A+ DRE Y L I+ D G P + + T+ + ++D+ND+ P I++S+++ S+ E+ E +++ ASD D G NA F + +F++D G + K L +E Y ++I V D G PS +++ + D
Sbjct: 1182 SQSAVAAITLTINDLNDNSPQFSQSKYTLTVTENTAN-GSNILRVLASDPD-AGANGRVTYSIISGNHGNAFRIDSTTGRITVV---GVVDREALASYNLTISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTIRASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSV--LTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKY-------------------------TAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTSVVKVSASDRD--SFGSLSYSI--VGGKDSDK--FSIDQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDN--SPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNL--SRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRP------------LINSSSLRG-------SVRENQPKETHVMRILASDADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADKGNPSLSSVADVIIDVID 1816 HSP 10 Score: 95.9005 bits (237), Expect = 5.818e-20 Identity = 131/487 (26.90%), Postives = 214/487 (43.94%), Query Frame = 1
Query: 178 IKENQP---GQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSY----------FVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIW---AWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEF---NANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAA--KNP-LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKD 1566
+ +N P Q+ IG + E+ ST +L ++ + L Y F ++S + ++ T T +D EE Q L V D V I V ++ND P F + SV+E S+ A DRD +++Y + SD F + + I+ LD E LY + + A N P N +TI++++ ND PKF Y S+ EN +S ++ A D DE ++ ITY + + + +S G I L +PLD E S + + +QA D+ ++ + +TV+D+ND P N + + E QP+ + +I D D+ N +L+ L N+ +F LD+ T D+ T+V DRE+ + + G A NP L+S + + + D +DN P F+ Y+V+I E+ P A +++VTA D D
Sbjct: 1405 VNDNPPVFNSQSYIGSVRENSAQSTS-VLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKS----------QYGLEVTATDS-KYTAKTNVTIRVINLNDITPAFTQQNYTASVREN-SPTSTSVVKVSASDRD---SFGSLSYSIVGGKDSDKFSI---DQRSGIISTADVLDRELVSLYAIQVRVTDAGNPPLSNLTW---VTIKILDENDNSPKFDSSSYSSSILENSAPSSFSFKLAATDADEGTNARITYNLS-RNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGTPPQASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADT-GLNAELTFSL---LSNEHKSVFT--LDNTTG----DISTKVPLDREQ------QAVYTLRIGVADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDID 1852
BLAST of Protocadherin gamma vs. Ensembl Nematostella
Match: EDO30364 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T100]) HSP 1 Score: 206.453 bits (524), Expect = 3.714e-54 Identity = 211/779 (27.09%), Postives = 362/779 (46.47%), Query Frame = 1
Query: 214 KISEDVPLSTQM-----ILRNLSEKINYRFQKQLSY--FVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSL-KGIIRVEINVQDVNDNVPTF-LTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFNA---NTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDND-EGDNGKLLFKLLPNHNENFFYL-----TINGSLQSAKEFDRETTDRYCLQI-EINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPG----FEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
K+SE+ + T + + +++ + I+Y Y F +D+ T ++T +D E + Q L V D ++L +++V + V+DVNDN P F + ++ +E G S+ KAID D+ ++ V Y + ++ T + V + I + LD E + +N I A +S ++ + S+ I++V+IND P F Y V EN P + ++ V A D+D +++++Y + F++ G I + PL+ E T + + ++A D+ A T+V+ITV D ND PQF + + E +G++ D D N ++ + +++F + L DRE+ + A L S ++ +TI D+NDN P+F K+VY+V++ E+ + +V++V ATD D G NG TY+I + +F ID+++G +T KLD EK S Y L + A+D GT P T +C + I + DV+DN+P F P+ E++EN G V + ATD D E + ++ +++ + ++ F + I + + +RET RY LQ+ I+ T I +LDVNDN PR +S + S+ E G IL +A D DEGE+ F I N+ +F +D + G+L R L +E Y++ ++ ED G+P+ S + + + D+
Sbjct: 1200 KLSENASIGTNVTKITALDKDIGDTISYSIANGDPYGLFTIDNVTGEIRTVAELDRENVT----------QYELFVQAKDSVNLVSDLLKVVVQVEDVNDNPPVFSMPGYTIEYWEESPEGT--SILQVKAIDADIG-DNAAVLYSIVENV---TDYVTVNAITGVISLGSSQLDREVEEYFNFTIRATDSGVPSKSSTASVAIKLVDINDNSPVFNNTDYYAYVRENQPAGTPVLVVTASDKDVGTNAKLSYVLSGVLYTRFAIDPDTGNITTREPLNREETGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHVPQFTQSGYAFSVREDVKVGHTVGRVATTDEDIND-NARVRYYISSG---NTSLMFSVNETTGIISTTSTL------DREQNASYTLIITAKDHGIPA---LESNTSVMITIEDVNDNKPLFSKSVYNVTLRESVFLKTQVVQVIATDPDEGANGQFTYKI----TAGDTDDVFYIDANTGLITIKAKLDYEKTSLYNLTVSAQDLGTPP--LTGACFVEIHVSDVDDNAPVFHKPRYSAELYENVTRGHHVITVNATDIDAEASHKRVYYRIESGNTDSMFLIGEQSGVITLNCTPSGCLNRETHARYELQVAAISRVNLTEQKSLVPAVITVLDVNDNAPRF-------------------DSESYVRSVLEDTGPITDATILTVKAQDGDEGESGEIIFTIVSGNENGVFQMDNKTGVLTRTRPLDREDTSFYSLVVMAEDKGEPALSSSVTVNITVLDM 1924 HSP 2 Score: 166.777 bits (421), Expect = 9.510e-42 Identity = 159/606 (26.24%), Postives = 264/606 (43.56%), Query Frame = 1
Query: 688 LVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSS-QYFSVSS-KGQIFLKRPLDFETTSLHLIDVQASD--NEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRV------RFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLT-INGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+++ LD E +Y L + A N A Q T + I V ++ D +P F V + EN I + + ++ A+D+D I+Y A+ F++ + G+I LD E + + + VQA D N + KVV+ V DVND P F++ E PE I Q+ D D A + +++ T Y + T V + DRE + +K +ST ++++ + DINDN+P+F Y + EN P V+ VTA+DKD+G N ++Y + + + F ID D+G +T L+RE+ Y L + A D ++ T+ I +T + + P+F + E+ K G VG + TD D DN ++ + + + F + G + + DRE Y L I D G L +V I I DVNDN P Y+ +T+ S++ ++++ A+D DEG N F ++I+ + D+F ID G++ +K KL E YN+ + +D G P + + + + D+
Sbjct: 1144 IIVDSPLDREFKNVYILNVTAANIVAGAQDTTTQVHITVTDVIDDKPYFNSSSLTVKLSENASIGTNVTKITALDKDIGDTISYSIANGDPYGLFTIDNVTGEIRTVAELDRENVTQYELFVQAKDSVNLVSDLLKVVVQVEDVNDNPPVFSMPGYTIEYWEESPEGTSILQVKAIDAD----------------IGDNAAVLYSIVENVTDYVTVNAITGVISLGSSQLDREVEEYFNFTIRATDSGVPSK---SSTASVAIKLVDINDNSPVFNNTDYYAYVRENQPAGTPVLVVTASDKDVGTNAKLSYVLSGVL-----YTRFAIDPDTGNITTREPLNREETGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHV--PQFTQSGYAFSVREDVKVGHTVGRVATTDEDINDNARVRYYISSGNTSLMFSVNETTGIISTTSTLDREQNASYTLIITAKDHGIPALESNTSVMITIEDVNDNKPLFSKSVYN---------------VTLRESVFLKT--QVVQVIATDPDEGANGQFTYKITAGDTDDVFYIDANTGLITIKAKLDYEKTSLYNLTVSAQDLGTPPLTGACFVEIHVSDV 1706 HSP 3 Score: 152.525 bits (384), Expect = 2.253e-37 Identity = 202/785 (25.73%), Postives = 340/785 (43.31%), Query Frame = 1
Query: 199 QTRIGKISEDVPLSTQMIL-------RNLSEKINYRFQK----QLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLS---LKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMII--QVEAVDEDED---SEITYRSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLID-----------------------VQASDNE----FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGK----YDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILI-----ATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQ-SAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGF---EILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKE 2373
Q + KI+E+ + T ++ + ++ Y+F Q +F L+S L +D E + + Y++V + + L L+ V I V D++D P FL S LK ++E +G ++ +A D DV +N + Y++ + F + + + ++ + ++D E+ ++ + + A P N T +++ + VV++ND P F Q Y V E++ + ++ Q++ D D++ + Y S F++ + G +++ + LD+E D V A++ + F+AN V +T+++VND P F + ++E I IT D D G L+ +E R QA F D+ T YD + +F +V DG + T+++T+ D+NDN P F Y+ I EN P V +VTATDKD G NG +++ I S + F I+ SG VT +LDRE + Y L + A D G + + + + ++D NDN+P+ L I N G G ++ A D D G NG+L + + + F + G LQ S DRE D Y L I + D G P + + TV + ILDVNDN P D +P ++ IT+D E PG ++ A+D D N + +S ++ F +DP G L V+++L +E
Sbjct: 49 QPYMAKIAENARVGTTILKISAIDADSGTNSQVQYKFSNATATQTPFFSLNSVNGELTLGGPLDFE-----------VARSYMLVVIAEDLGVPKLESRTTVIIEVTDISDMPPRFLQSFYLKEIEENT-PIGSTVVTVEARDGDVGI-NNPILYEIISGNSDGVFTI---DSNTGVITVNGSIDAEKTDVFRITVKASEVPDPNSNTTVTVVVTVVDVNDNRPAFLQSVYIFDVREDVALPGRVVSDQLQVTDGDKNPVFRRVLYHLVGADSDKFAIDPTSGTLYINKTLDYEKQINFTFDWERGCGSGGGSGWDWTGRGEEKKVVATETDTSEKFSANASVTLTLINVNDNKPMFAKSSYNYTMDEEITPGTHIADITATDADL-GTFGALT-YELR---GGQAAYFSVNADNGTISAAQILDYDTLRQYQF------------SLVVKDGGGFYQEIAIATVTVTLQDVNDNDPEFTGMPYTSDIAENLPAGTIVFQVTATDKDSGENGRLSFNI----SAGDDGGHFSING-SGLVTTARELDRETIATYTLTVSAYDHGVSSRHK--HVQLTVNVLDENDNTPQIT--DGLTITTNISEGAGGGTVLLSSIAAVDPDAGSNGQLTYS-MSGGDSRFTLNSATGRLQISPTGLDRELKDSYDLIINVTDNGSPPNTNSTTVHVTILDVNDNTPAF---DPNPA------QSLATYVITVD----EGPGTINKTLIDINATDPDADANGKVAYSLS-GDEHGFFRLDPVTGELSVRKELDRE 776 HSP 4 Score: 145.591 bits (366), Expect = 3.965e-35 Identity = 167/583 (28.64%), Postives = 272/583 (46.66%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYR-SADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANG----KLSCWEPRNLY----NKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDI-GRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLK----LDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLE-IFENEKPGTEVGILI--ATDNDEGDNGKLLFKLLPNHNENFFYLTIN--GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFP 2133
V I + D+NDN P F + V+E G + + A D+DV ++Y L +Y+ + T + + ++ L+ E Y L + A +S ++ + I V + ND P+F Q Y SV E++ + + +V DED +++ + Y S+ +S FSV+ + G I LD E + + + + A D+ +NT V+IT+ DVND P F+ + + E + Q+ D D E ANG K++ + +++ N + K LD Y K LY + V PLT + + ++D++DN P+F K YS + EN VI V ATD D + V Y I++ + S+F+I SG +T L+RE + Y+L + A + + +Q+ S IT++DVNDN+P+F + + E+ P T+ IL A D DEG++G+++F ++ + NEN + N G L + DRE T Y L + D+G+ LS + TV I +LD+NDN P L P
Sbjct: 1385 VAIKLVDINDNSPVFNNTDYYAYVREN-QPAGTPVLVVTASDKDVGTNAK-LSYVLSGVLYTRFAIDPDTGN----ITTREPLNREETGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHVPQFTQSGYAFSVREDVKVGHTVGRVATTDEDINDNARVRYYISSGNTSLMFSVNETTGIISTTSTLDREQNASYTLIITAKDHGIPALESNTSVMITIEDVNDNKPLFSKSVYNVTLRESVFLKTQVVQVIATDPD-EGANGQFTYKITAGDTDDVFYIDANTGLITIKAKLD----YEKTSLYN----------------LTVSAQDLGTPPLTGACFVEIHVSDVDDNAPVFHKPRYSAELYENVTRGHHVITVNATDIDAEASHKRVYYRIESGNT----DSMFLIGEQSGVITLNCTPSGCLNRETHARYELQVAAISRVNLTEQK-SLVPAVITVLDVNDNAPRFDSESYVRSVLEDTGPITDATILTVKAQDGDEGESGEIIFTIV-SGNENGVFQMDNKTGVLTRTRPLDREDTSFYSLVVMAEDKGEPALSSSVTVNITVLDMNDNLPILQTP 1934 HSP 5 Score: 142.51 bits (358), Expect = 3.076e-34 Identity = 145/561 (25.85%), Postives = 253/561 (45.10%), Query Frame = 1
Query: 811 INDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASD---NEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRD-SEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVT-ATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLE-IFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
IND P F++ Y V+V E+ +I +V A D DE ++ I Y S ++++ S G I + PLD E ++++++V A++ + T+V ITV DV D+ P FN + ++ E + +IT D+D + + ++ +P L+ +D+ T ++ T DRE V + N ++ + + + + D+NDN P+F Y++ E +P +++V A D DIG N V Y I + +++ +G ++ + +LDRE E ++ I A D G K T+S I ++D+NDNSP F + EN+ GT V ++ A+D D G N KL + L F G++ + + +RE T Y L + D T V I + D ND+ P+ Y S+ D+ + G + + +D D +NA + IS N +FS++ GI+ L +E Y + I +D+G P+ + +++ I+D+
Sbjct: 1082 INDESPLFEKSMYYVNVSESASRGIVIGRVTATDRDEGINAIIFYSSNGAEAKFYVSRSTGDIIVDSPLDREFKNVYILNVTAANIVAGAQDTTTQVHITVTDVIDDKPYFNSSSLTVKLSENASIGTNVTKITALDKDIGDTISYSIANGDPYGLFT---------IDNVTG----EIRTVAELDRENVTQYELFVQAKD----SVNLVSDLLKVVVQVEDVNDNPPVFSMPGYTIEYWEESPEGTSILQVKAIDADIGDNAAVLYSI-----VENVTDYVTVNAITGVISLGSSQLDREVEEYFNFTIRATDSGVPSKSSTASV--AIKLVDINDNSPVFNNTDYYAYVRENQPAGTPVLVVTASDKDVGTNAKLSYVLSGVLYTRFAIDPDTGNITTREPLNREETGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHVPQFTQSGY-------------AFSVREDVKV----GHTVGRVATTDEDINDNARVRYYISSGNTSLMFSVNETTGIISTTSTLDREQNASYTLIITAKDHGIPALESNTSVMITIEDV 1601 HSP 6 Score: 140.584 bits (353), Expect = 1.404e-33 Identity = 176/704 (25.00%), Postives = 322/704 (45.74%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLS-ITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYR-SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVV---ITVVDVNDEAPQFNLNPSF-CRIEEGQPEN-IIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEK------AVYSVSIEEN-NPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREK---------ESFYQLIIVAKDKGT-MPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRY-------CLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS-QKILVRIQD 2466
V + + +VNDN P F SS ++ E I G + A D D+ +TY+L + F + N + + + LDY+ + Y ++ + Q+ ++ +T+ + ++ND +P+F Y + ENLP +++ QV A D+D E+ +++ SA +FS++ G + R LD ET + + + V A D+ ++ K V + V+D ND PQ + I EG +++ I D D+ +NG+L+ Y+ + L+S T G+ + + DRE +I+ P T++ T+ +TI D+NDNTP F+ A Y ++++E ++ +I + ATD D NG V Y + E F +D +G ++ +LDRE + + L I A D+ T + +++++ ++IT+ D NDNSP+F + + E +PG+ V + ATD D GK+++ + + +EN ++ + E R+ C+ + + K + T+ V I + DVNDN P +F ++NS G +L+ ASD D+G N ++++ N D FSI+ G + V + +E + + + + ED G+PS + ++++ ++D
Sbjct: 375 VTLTLINVNDNKPMFAKSSYNYTMDEEITP-GTHIADITATDADLGT-FGALTYELRGG-QAAYFSVNADNGT---ISAAQILDYDTLRQYQFSLVVKDGGGFYQEIAIATVTVTLQDVNDNDPEFTGMPYTSDIAENLPAGTIVFQVTATDKDSGENGRLSFNISAGDDGGHFSINGSGLVTTARELDRETIATYTLTVSAYDHGVSSRHKHVQLTVNVLDENDNTPQITDGLTITTNISEGAGGGTVLLSSIAAVDPDA-GSNGQLT-------YSMSGGDSRFTLNSAT--GRLQI-SPTGLDRE---LKDSYDLIINVTDNGSPPNTNSTTVHVTILDVNDNTPAFDPNPAQSLATYVITVDEGPGTINKTLIDINATDPDADANGKVAYSLS-----GDEHGFFRLDPVTGELSVRKELDRESPQMSRNAQGDGRFLLDITATDQATPISDRKSATVRVSITVRDTNDNSPQFQSQNYETRLSEAARPGSNVIQVSATDQDLEYKGKVIYNIT-DGDEN-------------RKCEVEKLVRHYNWHKKNCVLCK---ESKCSVERTY-VVIYVDDVNDNDP--VFNQSKYAADVLENSPT---------------GTPVLRVHASDRDQGANGKITYKLTNGNKDDAFSINNVTGEITVAGVIDREAVHTFVLTVQAEDQGEPSSRKTFAEVVITVKD 1018 HSP 7 Score: 139.428 bits (350), Expect = 2.778e-33 Identity = 106/355 (29.86%), Postives = 176/355 (49.58%), Query Frame = 1
Query: 1420 LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIG-PKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEIL---KCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVK-RKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++ +++LT+ ++NDN P+F K+ Y+ +++E + +TATD D+G G +TYE+ + + F +++D+G ++A LD + YQ +V KD G Q+ + T+ +T+ DVNDN P+F G P +I EN GT V + ATD D G+NG+L F + + F + +G + +A+E DRET Y L + D G + + +N+LD NDN P++ + +TI +I E G + A D D G N + S+ F+++ G L++ L +EL Y++ I V DNG P +S + V I D+
Sbjct: 369 FSANASVTLTLINVNDNKPMFAKSSYNYTMDEEITPGTHIADITATDADLGTFGALTYEL-----RGGQAAYFSVNADNGTISAAQILDYDTLRQYQFSLVVKDGGGF-YQEIAIATVTVTLQDVNDNDPEFTGMPYTSDIAENLPAGTIVFQVTATDKDSGENGRLSFNISAGDDGGHFSINGSGLVTTARELDRETIATYTLTVSAYDHGVSSRHKHVQLTVNVLDENDNTPQI------------------TDGLTITTNISEGAGGGTVLLSSIAAVDPDAGSNGQLTY--SMSGGDSRFTLNSATGRLQISPTGLDRELKDSYDLIINVTDNGSPPNTNSTTVHVTILDV 697 HSP 8 Score: 134.42 bits (337), Expect = 9.792e-32 Identity = 175/662 (26.44%), Postives = 307/662 (46.37%), Query Frame = 1
Query: 154 FDDMIKYA-IKENQPGQTRIGKI-SEDVPLSTQMILRNLSEKINYRFQKQL-SYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGL--SLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYR--SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASD---NEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKL------SCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLT---STMTISLTIADINDNTPIFEKAVYSVSI-EENNPV-DAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP---------KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL--TINGSLQSAKEFDRETTDRYCLQIE 2037
F++ YA ++ENQP T + + + D + T K++Y L + F +D +T + T+ ++ EE G L + D + +G RV I V D ND+VP F S SV+E + VG ++ D D++ ++ V Y + + +T ++ N++ I+ LD E+ Y L I A + ++ S+ I + ++ND +P F + Y V++ E++ + + ++QV A D DE + + TY+ + D ++ ++ G I +K LD+E TSL+ + V A D V I V DV+D AP F+ + E + + D D+EA++ ++ + L +Q+ + + T G + T R++ + ++ LT S + +T+ D+NDN P F+ Y S+ E+ P+ DA ++ V A D D G +G + + I S N E +F +D+ +G +T T LDRE SFY L+++A+DKG +SS T+NIT++D+NDN P P + EN G VG++ A D D + L++ + N E +++ +G L++ DRE + + L ++
Sbjct: 1399 FNNTDYYAYVRENQPAGTPVLVVTASDKDVGTNA-------KLSYVLSGVLYTRFAIDPDTGNITTREPLNREE----------TGSYTLTLRAVDSAIRAREGTTRVIITVTDANDHVPQFTQSGYAFSVREDVK-VGHTVGRVATTDEDIN-DNARVRYYISS---GNTSLMFSVNETTGIISTTSTLDREQNASYTLIITAKDHGIPALESNTSVMITIEDVNDNKPLFSKSVYNVTLRESVFLKTQVVQVIATDPDEGANGQFTYKITAGDTDDVFYIDANTGLITIKAKLDYEKTSLYNLTVSAQDLGTPPLTGACFVEIHVSDVDDNAPVFHKPRYSAELYENVTRGHHVITVNATDIDAEASHKRVYYRIESGNTDSMFLIGEQSGVITL---NCTPSGCLNRETHARYELQ-------------VAAISRVNLTEQKSLVPAVITVLDVNDNAPRFDSESYVRSVLEDTGPITDATILTVKAQDGDEGESGEIIFTI---VSGN-ENGVFQMDNKTGVLTRTRPLDREDTSFYSLVVMAEDKG--EPALSSSVTVNITVLDMNDNLPILQTPMDVLIPERRTTFSVKENLDAGVPVGVVAAQDLDTKN---LIYYYITNTEEQKYFILNETSGELRTRITLDREDSSVHYLYVK 2013 HSP 9 Score: 132.88 bits (333), Expect = 3.040e-31 Identity = 184/648 (28.40%), Postives = 278/648 (42.90%), Query Frame = 1
Query: 496 PTFLTSSILKSVKEVIYGVGKSMELQ-KAIDRDVSKEHNTVTYKL-DADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNL-----------AIWAWNSPADNQK-------------TKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS--EITYRSADFSSQYFSVSS-KGQIFLKRPLDFETTSLHLIDVQASDN----EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP-IFEKAVYSVSIEENNPVDAKVI-KVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTAT-LKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLE------IFENEKPGTEVGILI---ATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRET---------TDRYCLQIEINDQGKTPL----SITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLD 2259
P FL S + V+E + G+ + Q + D D + V Y L AD SD F + T+ + L + K LDYE+ + + W W + +K S+T+ ++N+ND +P F + Y +++E + + I + A D D + +TY + YFSV++ G I + LD++T + + D + A V +T+ DVND P+F P I E P I+ Q+T D+DS NG+LS +N A D F G + T DR ETI + D G + +T++ + D NDNTP I + + +I E ++ + A D D G NG +TY SM+ S F ++S +G + + LDRE + Y LII D G+ P T+S T+++TI+DVNDN+P F P + I +E PGT LI ATD D NGK+ + L + + F + G L KE DRE+ R+ L I DQ TP+ S T V I + D NDN P+ +Y + LS PG +++ A+D D
Sbjct: 256 PAFLQSVYIFDVREDVALPGRVVSDQLQVTDGDKNPVFRRVLYHLVGAD--SDKFAIDPTSGT---LYINKTLDYEKQINFTFDWERGCGSGGGSGWDWTGRGEEKKVVATETDTSEKFSANASVTLTLINVNDNKPMFAKSSYNYTMDEEITPGTHIADITATDADLGTFGALTYELRGGQAAYFSVNADNGTISAAQILDYDTLRQYQFSLVVKDGGGFYQEIAIATVTVTLQDVNDNDPEFTGMPYTSDIAENLPAGTIVFQVTATDKDS-GENGRLS-------FNISA-----GDDGGHFSINGSGLVTTARELDR-ETIATYTLTVSAYDHGVSSRHKHVQLTVN--VLDENDNTPQITDGLTITTNISEGAGGGTVLLSSIAAVDPDAGSNGQLTY------SMSGGDSRFTLNSATGRLQISPTGLDRELKDSYDLIINVTDNGSPP--NTNSTTVHVTILDVNDNTPAF-DPNPAQSLATYVITVDEGPGTINKTLIDINATDPDADANGKVAYSLSGDEHGFFRLDPVTGELSVRKELDRESPQMSRNAQGDGRFLLDITATDQA-TPISDRKSATVRVSITVRDTNDNSPQFQSQNYETR-----------------LSEAARPGSNVIQVSATDQD 855 HSP 10 Score: 107.071 bits (266), Expect = 2.429e-23 Identity = 204/822 (24.82%), Postives = 327/822 (39.78%), Query Frame = 1
Query: 271 KINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTG---EMGQLY-LVVNVWDGLSLKGI--IRVEINVQDVNDNVPTF------LTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKL---------YNLAIWAWNSP---ADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDED--SEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGL-------VTYEIDNLRSMNP-----------EKSLFVID-SDS-------GWVTATLK---------------------------------LDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESP-GFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRV-KRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++ Y S F L+S T L+ PTG E+ Y L++NV D S V + + DVNDN P F ++ + +V E + K++ A D D + + V Y L D + + VT + L ++K LD E ++ + L I A + +D + + ++I V + ND P+F+ Q YE + E S +IQV A D+D + ++ Y D K L R ++ + L E T VVI V DVND P FN + + E P + ++ DRD + ANGK++ ++ N A T G D E + + D G + T + +T+ D NDN P F Y I EN+PV + + V D+ I + L + R P EKS++ ++ S+S G VTAT + LDRE ++ Y L + A + + Q ++ ++IT+ DV D+ P F +++ EN GT V + A D D GD + + + F + + G +++ E DRE +Y L ++ D +S V + + DVNDNPP P Y +Y W ESP G IL+ +A D D G+NAA + I + N D +++ G++ + +L +E+ +N I D+G PSK + + +++ DI
Sbjct: 634 QLTYSMSGGDSRFTLNSATGRLQI-------------SPTGLDRELKDSYDLIINVTDNGSPPNTNSTTVHVTILDVNDNTPAFDPNPAQSLATYVITVDEGPGTINKTLIDINATDPD-ADANGKVAYSLSGDEHGFFRLDPVTGE----LSVRKELDRESPQMSRNAQGDGRFLLDITATDQATPISDRKSATVRVSITVRDTNDNSPQFQSQNYETRLSEAARPGSNVIQVSATDQDLEYKGKVIYNITDGDENRKCEVEK----LVRHYNWHKKNCVLCKESKCSVE---RTYVVIYVDDVNDNDPVFNQSKYAADVLENSPTGTPVLRVHASDRD-QGANGKIT-YKLTNGNKDDAFSINNVTGEITVAGVID---------REAVHTFVLTVQAEDQGEPSSRKTFAEVV-ITVKDENDNFPQFSFTGYEGEIAENSPVGSTITMV--PDQKISSSTLRPRSSPRAPAALLTAREKRPITLINDESPLFEKSMYYVNVSESASRGIVIGRVTATDRDEGINAIIFYSSNGAEAKFYVSRSTGDIIVDSPLDREFKNVYILNVTAAN--IVAGAQDTTTQVHITVTDVIDDKPYFNSSSLTVKLSENASIGTNVTKITALDKDIGD--TISYSIANGDPYGLFTIDNVTGEIRTVAELDRENVTQYELFVQAKDSVNL-VSDLLKVVVQVEDVNDNPPVFSMPGYTIEY-W-----------------EESPEGTSILQVKAIDADIGDNAAVLYSI-VENVTDYVTVNAITGVISLGSSQLDREVEEYFNFTIRATDSGVPSKSSTASVAIKLVDI 1392 HSP 11 Score: 92.8189 bits (229), Expect = 5.018e-19 Identity = 114/479 (23.80%), Postives = 210/479 (43.84%), Query Frame = 1
Query: 412 LVVNVWD-GLSLKGI-IRVEINVQDVNDNVPTFLTS-SILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWN--SPADNQKTKLSITIRVVNINDMEPKF------KQQKYEVSVEEN-LPINSMIIQVEAVDEDEDS--EITYRSADFSSQYFSVSS-KGQIFLKRPLDFETTSLH---------LIDVQASD------NEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQT 1758
L V+ +D G+S + +++ +NV D NDN P +I ++ E G + A+D D + + +TY + F L I LD E Y+L I + SP + T + +TI +++ND P F Y ++V+E IN +I + A D D D+ ++ Y + +F + G++ +++ LD E+ + L+D+ A+D + +A +V ITV D ND +PQF R+ E + Q++ D+D E ++ + +YN + + Y+ + + +E +K + T + + + D+NDN P+F ++ Y+ + EN+P V++V A+D+D G NG +TY++ N + F I++ +G +T +DRE + L + A+D+G ++T
Sbjct: 566 LTVSAYDHGVSSRHKHVQLTVNVLDENDNTPQITDGLTITTNISEGAGGGTVLLSSIAAVDPD-AGSNGQLTYSMSGG--DSRFTLNSATGRLQI--SPTGLDRELKDSYDLIINVTDNGSPPNTNSTTVHVTI--LDVNDNTPAFDPNPAQSLATYVITVDEGPGTINKTLIDINATDPDADANGKVAYSLSGDEHGFFRLDPVTGELSVRKELDRESPQMSRNAQGDGRFLLDITATDQATPISDRKSATVRVSITVRDTNDNSPQFQSQNYETRLSEAARPGSNVIQVSATDQDLE--------YKGKVIYNITDGDENRKCEVEKLVRHYNWHKKNCVLCKE----------------SKCSVERTYVV-IYVDDVNDNDPVFNQSKYAADVLENSPTGTPVLRVHASDRDQGANGKITYKLTN----GNKDDAFSINNVTGEITVAGVIDREAVHTFVLTVQAEDQGEPSSRKT 1008 HSP 12 Score: 73.1738 bits (178), Expect = 4.968e-13 Identity = 66/215 (30.70%), Postives = 101/215 (46.98%), Query Frame = 1
Query: 433 GLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDT--FMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYR--SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASD 1059
GL+ +G + V D NDN P F + + E VG ++ AID D S ++ V YK + T F L N L L LD+E + Y L + A + +++ ++ I V +I+DM P+F Q Y +EEN PI S ++ VEA D D ++ I Y S + + S+ G I + +D E T + I V+AS+
Sbjct: 23 GLARRGSKFFFLIVDDYNDNAPVFTEQPYMAKIAENAR-VGTTILKISAIDAD-SGTNSQVQYKFSNATATQTPFFSLNSVNGE---LTLGGPLDFEVARSYMLVVIAEDLGVPKLESRTTVIIEVTDISDMPPRFLQSFYLKEIEENTPIGSTVVTVEARDGDVGINNPILYEIISGNSDGVFTIDSNTGVITVNGSIDAEKTDVFRITVKASE 232 HSP 13 Score: 71.633 bits (174), Expect = 1.504e-12 Identity = 117/492 (23.78%), Postives = 199/492 (40.45%), Query Frame = 1
Query: 1090 ITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXS-PKFIGPKKLEIFENEK----PGTEVG-ILIATDNDEGDN-GKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQ------------------------IEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGK-PSKMHSQKILVRIQDI 2469
+ V D ND AP F P +I E I +I+ D DS N ++ ++ N Q F L+S G+ L + F E V+I D G K L S T+ + + DI+D P F ++ Y IEEN P+ + V+ V A D D+G N + YEI + S +F IDS++G +T +D EK +++ + A + +P +++ + + +++ P F+ + + IF+ + PG V L TD D+ ++L+ L+ ++ F +G+L K D E + + S +V + +++VNDN P Y+ YT E IT PG I A+D D G A + + FS++ G + + L + + Y ++V+D G ++ + V +QD+
Sbjct: 34 LIVDDYNDNAPVFTEQPYMAKIAENARVGTTILKISAIDADS-GTNSQVQ-YKFSNATATQTPFFS--LNS--VNGELTLGGPLDF---EVARSYMLVVIAEDLGVPK--LESRTTVIIEVTDISDMPPRFLQSFYLKEIEENTPIGSTVVTVEARDGDVGINNPILYEIISGNS----DGVFTIDSNTGVITVNGSIDAEKTDVFRITVKASE---VPDPNSNTTVTVVVTVVDVNDNRPAFL--QSVYIFDVREDVALPGRVVSDQLQVTDGDKNPVFRRVLYHLVGADSDKFAIDPTSGTLYINKTLDYEKQINFTFDWERGCGSGGGSGWDWTGRGEEKKVVATETDTSEKFSANASVTLTLINVNDNKPMFAKSSYN--YTM-------DEEIT--------PGTHIADITATDADLGTFGALTYELR-GGQAAYFSVNADNGTISAAQILDYDTLRQYQFSLVVKDGGGFYQEIAIATVTVTLQDV 487 HSP 14 Score: 56.6102 bits (135), Expect = 5.640e-8 Identity = 58/223 (26.01%), Postives = 106/223 (47.53%), Query Frame = 1
Query: 445 KGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQ-KAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNIND--------MEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFNANT 1080
K ++ I V DVNDN P F + S ++SV E + + L KA D D E + + + + + F + ++ +L + LD E Y+L + A + + +++ I V+++ND M+ +++ SV+ENL + V A D D + I Y + Q YF ++ + G++ + LD E +S+H + V+AS+++ N T
Sbjct: 1805 KSLVPAVITVLDVNDNAPRFDSESYVRSVLEDTGPITDATILTVKAQDGD-EGESGEIIFTIVSGNENGVFQM---DNKTGVLTRTRPLDREDTSFYSLVVMAEDKGEPALSSSVTVNITVLDMNDNLPILQTPMDVLIPERRTTFSVKENLDAGVPVGVVAAQDLDTKNLIYYYITNTEEQKYFILNETSGELRTRITLDREDSSVHYLYVKASNDKLNITT 2023
BLAST of Protocadherin gamma vs. Ensembl Nematostella
Match: EDO35412 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLK9]) HSP 1 Score: 194.897 bits (494), Expect = 1.608e-50 Identity = 206/744 (27.69%), Postives = 334/744 (44.89%), Query Frame = 1
Query: 301 SYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKG-IIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDT---FMLKVTND-----------SFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYR-SADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEF---NANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRI 2460
S F LDS+T +++TK +D E + + V+ G+ K + V INV D NDN P + + KAI + S + + Y L D S+T LK+TN F + L+K LD E YNL + + ++ T + I V ++ND P F Y ++ E S ++Q+ A D DE + ++Y + +F V G + +PLD E S I + A D+ +T V +T++D ND P+F + I EG + Q++ D DS NG+++ +E + + +F+ L+++T L+T+ + DR ET ++ D G + L S++ + LTI+DINDN P+F Y SI EN P K+++VTATD D G N +++Y+I F IDS +G ++ LD E E F+ LII AKD G K + +N+T+++ DN P F+ ++EN GT VG + AT D+ NG + + ++ N F + + G ++ + DRE +Y L + PLS TV I +LD NDN P+ S+ +D+ G + A DLD G+N ++++ N + I+ G++++ RKL Y VQ++ D+G P + + I + +
Sbjct: 254 SIFDLDSSTGVIRTKQNLDFEV---------KNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYL------------PPHNGDKAIRSENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDS-GDNGRIT-YEISSSDAQVNGLFE--LNTQTGV----LWTKSQLDR-ETKSLYSFTVLAKDHGDPQ--LMSSVKVELTISDINDNAPVFYPVEYFASIMENEP-PGKLLQVTATDADEGTNAVISYDIIG----GNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGGN--KYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDK--NGSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQF-----------------STSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLT-SNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITL 938 HSP 2 Score: 180.644 bits (457), Expect = 3.866e-46 Identity = 220/781 (28.17%), Postives = 325/781 (41.61%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLID----------LEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT---NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS--EITYR---SADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEF---NANTKVVITVVDVNDEAPQFNL------NPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNE--NFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNG 2418
+ ++E QP T +GK+ F+ F +SNT ++ T ID L L P + P I V++ V D+NDN P F T ++E + V + + A D D + + TV Y + + + TF L T S ++ KK LD E Y L I A + I I +++ ND P F Q Y S+ EN I++V A D D S +I Y A S+ F + SS G I K+ LDFE + + +V ASD N V I V+D ND +PQ + N E N I I + D+DS S E + FK F G Y + + DRE + + +++ L + + + D+NDN+P F Y+ +I E + V+++ ATD D G NG V+Y I + F +D SG VT LDRE+ S + I A+D G+ PK T S T+ +TIID NDN P+F+ K I E G V + ATD D GDNG++ +++ + + F L T G L + + DRET Y + D G L + V + I D+NDN P +Y + ++N E PG ++L+ A+D DEG NA + I N+ FSID G++ L E+ +++ I +D G
Sbjct: 14 FHVQEEQPPGTYVGKVDG-----------------ASAFEGSPKQFGFNSNTGVISTTARIDRETTTQISLQLRTLNPSNQP----------------------ISVQVQVDDINDNEPRFPTLYYTLRIRESM-DVNTTNPINTATDPD-AGNNGTVDYTIASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKITYLPPHNGDKAIRSENSLINTNIAYILVTDKDSNTN----SQTELKITNGDDEGCFK-----VEFLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVL---IDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDL----GWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPK--TGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFA--SIMEN---------------EPPG-KLLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASLDHEVEEFFSLIISAKDGG 717 HSP 3 Score: 165.236 bits (417), Expect = 2.433e-41 Identity = 203/792 (25.63%), Postives = 345/792 (43.56%), Query Frame = 1
Query: 160 DMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQ--LSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITYRSADFSSQ-YFSVSSKGQIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYG----KYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLT---STMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKK---LEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELI--GDYNVQIIV--EDNGKPSKMHSQKILVRIQD 2466
+M + + EN P T +G++ ++ + I+Y + F++DS I+K +D EE L ++ V L V I V D NDN P F TSS++ + + + VG+ + A+D D K + V Y+L ++ +L + + S I + +K D + + Y + + A +S + Q + ++I I ++IN PKF Y V + P++ V AVD+D ++ ++ Y + + F + G++++++ L + + V+A+D F+A+ V I + D ND F N + E ++G + D +++ I + S++ + + TRVR DREE I + + + A N T + +T+ D+NDN P+F +AVY++++ E + + V ++ A D D G N Y + + M+ F I+S +G + + LDRE S Y L++ A D S+ I IT+ D ND P F P+ + I E+ G+ V L A+D D G NG + + + + F + + G L AK D ETT Y L I D G PLS T V +N+LDVNDN P +FP + +T+ + + GF + +C ASD D G NA F + FS++ + + E + G + Q++V D G P + I V++ D
Sbjct: 744 EMYNFTVYENVPKGTLVGRV--------YATTKDKNGSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKA--------QYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDI-DGTWLVGQVVYNAAAVDLDAGK-NGLVRYQLTSNAEG---LLWINSTSGVIKLARKLTDGDETQ-YTVQVLASDSGSPPQHSTMTIHI-TLSIN-HPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDSGKNGQLFYSIPQGNEEGLFGIFPGGKLYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALD----------------HSRTKDIVYSLISSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDK----FFINSSTGELHLSKTLDRETTSSYNLVVKATDASN--ANLYSTAKIEITVGDSNDQRPVF--PESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAP--LFP---------------TQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTD 1470 HSP 4 Score: 151.754 bits (382), Expect = 4.504e-37 Identity = 164/595 (27.56%), Postives = 265/595 (44.54%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS----EITYRSADFSSQYFSVSSKGQ-------IFLKRPLDFETTSLHLIDVQASDNEFNANTK---VVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSC---WEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIF----------EKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLK--LDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIG-PKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTI-NGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDP--DIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+S+ ++V +IND EP+F Y + + E++ +N+ A D D + + T S D ++ FS+ + + K+PLD ETT + +++ A+D A + IT++D ND AP F N I E + I +++ DRDS +NG + W+ + IF LDS T + T+ D E VI +KN L T+++ + D NDN+P +KA+ S EN+ ++ + + TDKD N +I N K F+ G+ L+ LDRE FY L + DKG +P + T + ++ SP F I E + G+ V L ATD DEGDNG + + + ++ +F + +G + +AK DRE + I D G P + + TV + I+D NDN PR + Y K +I+ SI G +L+ A+D+D G+N + IS + +F ++ Q G+L K +L +E Y+ ++ +D+G P M S K+ + I DI
Sbjct: 79 ISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASGD-NTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDS-GSNGDIKYAIDWDAI----QSNSIFD--LDSSTGV----IRTKQNLDFEVKNSYTFNVIASDGGVPSKNDL---ATVTINVLDTNDNSPQLKITYLPPHNGDKAIRS----ENSLINTNIAYILVTDKDSNTNSQTELKITNGDDEGCFKVEFL-----GFYFIQLQKPLDRELVPFYNLTLNVTDKG-VPSRSTLGFVLIDVTDVNDN-SPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGNDLGWFQVDFQSGLVTTAKPLDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSY-------------KGTISEGASI----GATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDI 630 HSP 5 Score: 136.346 bits (342), Expect = 2.336e-32 Identity = 167/670 (24.93%), Postives = 290/670 (43.28%), Query Frame = 1
Query: 157 DDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY--RSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNE---FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTF---YGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNP-LTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK------KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFF-YLTINGSLQSAKEFDRETTD-RYCLQI-EINDQGKTPLSITHTVCINILDVN 2106
++ ++A+ EN T +G L + + ++ I Y S+F +D + + T+ +D EEL + + Q + N K I+ V V D+NDN P F + +V E+ G + KA+D D ++ Y L + D F + N S L L K LD E YNL + A ++ N + I I V + ND P F + Y V++ E+ I S++I + A D+D ++ I Y + + ++ + S+ G++ + + LDFETT L+ + + A D+ ++ V + V+DVND AP F P + E +G+ T DRD+ N ++ ++Y++ SKTF ++ T D E +V +P L++ +I++ + D NDN+P F + + N V+ +TA D D NG VTY I ++ F + +G + ++ + + YQL I A D G P +QT + + V P GP + + EN+ GT V ++A NG + + L + ++ F + G +++ + DRE + L + ++ QG + + + TV I + DVN
Sbjct: 1052 NNTFRFAVAENSSPGTLVGT------LVAHALDHSRTKDIVYSLISSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIV--TVTDLNDNAPVFSRAVYAITVSELSL-PGSPVFRIKAMDAD-EGDNAKFFYSLVSGTGMDKFFI---NSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDT-GTNAHIAF----SMYSQTP--------SKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAGSSLN-----VMTITAEDPDRNSNGKVTYSI-----ISGNNGYFNLHPSTGQLQMIHQI-PDNPTIYQLTIQASDGG-QPSRQTQTV------VSVFKEGPIGGGPTFSSADYQGSVTENKVAGTSVVTVLAAYPQSSLNGNIEYYLTSDSSKGGFEVVKSTGVVKTTRGIDREGMGASFNLVVYAVDKQGPSARTSSATVTITVQDVN 1677 HSP 6 Score: 130.954 bits (328), Expect = 9.226e-31 Identity = 152/606 (25.08%), Postives = 256/606 (42.24%), Query Frame = 1
Query: 688 LVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMI--IQVEAVDEDEDSEITYRSADFSSQYFSVSSK-GQIFLKRPLDFE------TTSLHLIDVQASDNEFNANTK---VVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKY-------DLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETT----DRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSK 2430
L ++K+L Y+L + A + + + +TI + + ND F + +V EN +++ + A+D +I Y S S +F+V + GQI + LD E ++++++ +A N+ V++TV D+ND AP F+ + E + +I D D E N K F L S T K+ +L+ DRE T V A+ L ST I +T+ D ND P+F ++ Y+V+I E+ + + VI + A+DKDIG+NGL+ Y I N ++F ++S +G + LD E Y+L I A+D G +P +S+ + + ++DVNDN+P F P L + EN G VG A+D D G N + F + F + + + + D ET D + L + DQG LS ++ + + D NDN P + P + ++ ++ A D D N + I + + F++ P G L++ ++ Y + I D G+PS+
Sbjct: 1002 LYIRKSLLQALKGSYDLIVRATDGGVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVY-SLISSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDAD-EGDNAK----------------FFYSLVSGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATD---ASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSISN----GNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIP--LSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDRDTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSPGFVSPPAAAAGSSLN----------------------VMTITAEDPDRNSNGKVTYSI-ISGNNGYFNLHPSTGQLQMIHQIPDNPT-IYQLTIQASDGGQPSR 1556 HSP 7 Score: 113.235 bits (282), Expect = 3.080e-25 Identity = 173/759 (22.79%), Postives = 302/759 (39.79%), Query Frame = 1
Query: 307 FVLDSNTSILKTKTLID--LEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVN--DNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYR---SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEF--NANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRN-------------LYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREK--------------ESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFI-GPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHN-ENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
F +DS+T ++ T +D +EE L+++ DG + +NV +N DN+P FL +V E + L + ++ +++Y + + ++ F++ T I+ + +D E Y LA+ A + ++ I V++ ND P+F V ++ + ++ AVD D R +++ + S+ G I L R L + + + V ASD+ +T + + +N P+F L+ + QP + + D+DS NG+L P+ LY +++++ + G YDL R DG + ++++ +++ I D ND+ +F + ++ EN+ V + A D R + Y S+ +S F +D SG +T ++LDRE+ E+ Y + +DK + T +NDN+P F + + E PG+ V + A D DEGDN K + L+ + FF + G L +K DRETT Y L ++ D L T + I + D ND P +FP+ YT +IT D I G ++ ASD D G+N + IS N +F ++ G L V + L E Y + I +D+G + + V + D+
Sbjct: 684 FSIDSSTGVISTLASLDHEVEEF------------FSLIISAKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENV----PKGTLVGRVYATTKDKNGSISYAIVSGDPTNLFLVDSTGG---IIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNIEVLDRNDNAPQFSTSSVIVDIDGTWLVGQVVYNAAAVDLDAGKNGLVRYQLTSNAEGLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTMTIHITLSIN-HPPKFTLSSYVTHVLASQPLSYQFFYVVAVDQDS-GKNGQLFYSIPQGNEEGLFGIFPGGKLYIRKSLL-------QALKGSYDLIVRA------------------TDGGVPS-FSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKDIVY------SLISSESHFAVDVRSGQITTRVRLDREELIKNTGSNVYIMQAEAMYNDTTIKRDKAIVIVTVTD----------LNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHLSKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRP--VFPE--SDYTV---------NITEDALI----GSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSSTVNVTVNVLDV 1362 HSP 8 Score: 107.457 bits (267), Expect = 1.805e-23 Identity = 115/393 (29.26%), Postives = 183/393 (46.56%), Query Frame = 1
Query: 1327 LYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATL------KLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKL-EIFENEKPGTEVGILIATDNDEGDNGKLLFKL---LPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIG--ILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ T R DRE T ++ + NP +++ + + DINDN P F Y++ I E+ V+ TATD D G NG V Y I + + F + + + +TL LDRE FYQL I A D+GT C INITI+D ND++P F L I EN KPG + + A D D G NG + + + N F + G +++ + D E + Y + +D G + TV IN+LD NDN P+L Y P + + ++ E+ I+ +I IL +D D N+ +I+ +D F ++ +G +++++ L +EL+ YN+ + V D G PS+ +L+ + D+
Sbjct: 51 ISTTARIDRETTTQISLQLRTL-------NPSNQPISVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTI----ASGDNTATFSLGTTACPTGSTLCVITKKPLDRETTDFYQLNITATDRGT--PALMGYCLINITILDENDHAPVFTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLKIT-YLPPHNG--DKAIRSENSLINTNIA-----YIL---VTDKDSNTNSQTELKITNGDDEGCFKVE-FLGFYFIQLQKPLDRELVPFYNLTLNVTDKGVPSRSTLGFVLIDVTDV 418
BLAST of Protocadherin gamma vs. Ensembl Nematostella
Match: EDO48237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKF4]) HSP 1 Score: 193.741 bits (491), Expect = 4.354e-50 Identity = 210/788 (26.65%), Postives = 346/788 (43.91%), Query Frame = 1
Query: 175 AIKENQPGQTRIGKISEDVP--LSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGL--SLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS--EITYRSADFSSQ-YFSVSS-KGQIFLKRPLDFETTSLH--LIDVQASDNEFNAN-TKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQ----ITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEI------DNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDP-DIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
++ E+ T + +S P S MI ++S N +YF +D T ++ TK +D E L + + V DG SL+G + + INV DVNDN P F + + E +G + +A D D L++D D + S + V+KK LD E+ Y L + A + + +++ I ++++ND P+F ++ Y ++ E++P+N ++ V A D D+ S E+ + + +FS++ G++ +K+ LD+E + L+ Q F N T V I ++DVND APQF ++ F + PEN +GQ + +D+D NG+++ +N P G + + DRE+ + K T I++T+ DINDN P F + Y SI EN+ V++V A D D G +V Y I D +NP+ G +T + L+ + Y + A D G + +S+ + + + D N ++P+F E+ E+ GT V ++ATD D G N K+ + + E F G +++A DRE D Y ++ D G L V I+I DVNDN P + P Y K +E I PG +++ ASD D G+NA + + D F+ID GI+R + L +E I +Y + ++ D G P S K+ V ++D+
Sbjct: 28 SVSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPSQNL---MSATYFSIDQITGVITTKRGLDREFL----------DRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPE-DKSIGDFVLAVRASDADSGSNGEVKYCILNSD--GDNSAFSIGEVSGAVTVMKK-LDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQF-VSSHF---QTMIPENYAVGQEFYRVQAYDKD-HGTNGEITFSFMQN---------DLPFSINENTGGISI--KEELDREKVPKFTFGIKARDKGVPFKE---GTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVV-YSIVSSSGHDRCFRINPQ----------GLITLSCTLNYNTKHVYVFSVSASD-GML----SSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPE-FSVDETTGVIKTAGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKV---------REDI--------RPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDV 745 HSP 2 Score: 163.31 bits (412), Expect = 1.339e-40 Identity = 157/566 (27.74%), Postives = 266/566 (47.00%), Query Frame = 1
Query: 460 VEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPI------LVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDED-SEITYR--SADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGP-KKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTIN-GSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRL 2124
V+I + DVNDN P F++S + E Y VG+ +A D+D H T + +I TF + F I + +K+ LD E+ + I A + ++ ITI +++IND PKF Q++Y S+ EN + ++QV+A+D D + + Y S+ + F ++ +G I L L++ T +++ V ASD ++ V + V D N AP+F ++E + + DRD+ +N K+S Y+ ++ + +D T K T DRE+ D + + D G + L + + + IAD+NDN P+F K Y + E+ +VI+V+A+D DIG+N + Y + S + F IDS G + LDRE Y+L +VA D+GT P Q +S + + + DV D+ P F P ++ + E+ P + V + A D +++ ++ ++ F + N G++Q+ + D ET Y L + +P TV + + D+NDN P L
Sbjct: 325 VDIALIDVNDNAPQFVSSHFQTMIPEN-YAVGQEFYRVQAYDKD----HGT-----NGEI---TFSFMQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQGLITLSCTLNYNTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDT-GSNAKIS-------YSIATLVPEFSVDETTGVIK----TAGSLDREKV-DTYRFEVTATDHGIPQ--LKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIY---SFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQ--ASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTVRAT---LSPFFTETTVMVYLKDINDNTPVL 854 HSP 3 Score: 150.984 bits (380), Expect = 7.529e-37 Identity = 163/666 (24.47%), Postives = 281/666 (42.19%), Query Frame = 1
Query: 454 IRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEF---NANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAAN---------GKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNE--NFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQI 2400
+ V+I + DVND P F +++E + V + + +A D D + V +++ + + F + N + K+ LDYE ++NL + A + + ++ I ++++ND P+F ++ + EN + +V+A D+D + EIT+ + + G I +K LD E ++A D ++ IT++D+ND P+F+ I E + Q+ D DS N G C+ N Q +I L Y +Y A+ L+ST + + + D N + P F++ YS ++E+ + V+ V ATD+D G N ++Y I L PE F +D +G + LDREK Y+ + A D G +P+ + S + I I DVNDN P F+ P + ++ E+ +PG V + A+D D G N ++++ N + F + G +++ K DRET Y L + DQG P + V + + DV D+PP P Y TV +++ P ++ +A D + I N P +F I+P G ++ KL E +Y + +
Sbjct: 218 VTVKITLLDVNDCTPQFSKKVYSATIREDV-PVNQLVTTVRATDCD-QGSNGEVFFEIVSGNDMNFFSINRINGEVRV---KQKLDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFR----INPQGLI---TLSCTLNYNTKHVYV-------------------FSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLV---PE---FSVDETTGVIKTAGSLDREKVDTYRFEVTATDHG-IPQLKAKS-FVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYE--------VTVPEDT---------PPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTV 827 HSP 4 Score: 80.8777 bits (198), Expect = 2.709e-15 Identity = 86/334 (25.75%), Postives = 151/334 (45.21%), Query Frame = 1
Query: 211 GKISEDVPLSTQMIL-------RNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTV-TYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADF---SSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAP---QFNLNPSFCRIEEGQ 1167
++ ED L T ++ + KI+Y + F +D T ++KT +D E++ + + + LK V I++ DVNDN P FL S V+E I G+ +E+ A D D+ K + ++ + D TF + T I+ K LD E Y L + A + + + + + + ++ D P F++ YEV+V E+ P S +I V+A +D E + S Q F ++ + G I LD+ET S + + V+A+ + F T V++ + D+ND P F++N + ++EG+
Sbjct: 550 AEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDREKV--------DTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIRPGGRVIEVS-ASDADIGKNAQIIYSFASNGD-GQGTFTIDSTQG---IIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEYRLTVRATLSPFFTETTVMVYLKDINDNTPVLEAFHMNIN---VQEGK 867
BLAST of Protocadherin gamma vs. Ensembl Nematostella
Match: EDO34815 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SN97]) HSP 1 Score: 191.045 bits (484), Expect = 4.758e-50 Identity = 208/751 (27.70%), Postives = 334/751 (44.47%), Query Frame = 1
Query: 301 SYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGL-SLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTF--MLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSIT-IRVVNINDMEPKFKQQKYEVSVEEN----LPINSMIIQVEAVDED--EDSEITYRSADFSSQYFSVSSKGQIFLKR-----PLDFETTSLHLIDVQASDNEFNAN---TKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVR--FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFK--LLPNHNENFFYLTINGSLQSAKEFDRE-----TTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
S F LD NT ++KT ++ ++ + G GL S RV I V D+NDN P F ++ +V E VG S+ A D D S ++ VTY + A F + KV+N + + LD E YNL I A + +T ++I +R+++ ND PKF +Y S++EN +P+ M + A D D ++++ YR S F+V+ + + R LD E T+ + V A+D + +VVI V+D ND P+F + I E + ++T D DS NG++ + K G+ D RV DRE V V + + +P T+++T+ D+NDNTP F K ++V + E V + ++ TATD D G N +TY + F I+S++G VT T LDRE + Y + A+D G + S+ +N+ I D NDNSP+F + + ++ + GT V + A D D G+NG + + +LP F + G++ ++ + DRE T Y L + + D G T + + I++ D NDN P+ +Y T ++N V G ++ A D D G N+ + SL +FSI+P G +R+++ + +E +Y+V I D G P K+ V + D+
Sbjct: 55 SDFTLDPNTGMIKTARNLERQQTFSYNLTIGAADH---------GLPSFSATTRVSIVVGDLNDNNPVFNPTNYSTTVFEN-SPVGTSLLDVTATDAD-SGQNAYVTYSVTAGDSHGLFRAVTKVSNHG--TIEVAGNLDREVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENSGPGVPVQ-MASSIMATDRDIESNADVRYRLNGSDSIQFAVNPRTGVITTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDS-GLNGRIFFS------------INSGSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAID---GSYSPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYSM--------SYPGFAINSNTGSVTITRPLDRETKQAYSFTVHARDGGGLE----SNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAILILP-----FIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQPQFNQSEY--SATVLENMPV---------------GTKVTMVTARDEDSGINSQIMY--SLTGGDGVFSIEPSTGQIRLQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDV 739 HSP 2 Score: 164.851 bits (416), Expect = 9.826e-42 Identity = 187/719 (26.01%), Postives = 310/719 (43.12%), Query Frame = 1
Query: 394 EMGQLY-LVVNVWDG---LSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAI---DRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLK----KALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNEFN---ANTKVVITVVDVNDEAPQFNLNPSF-CRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLY----NKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLI-----IVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQD 2466
E+ Y L + DG +S I + + D NDNVP F + S++E G G +++ +I DRD+ + V Y+L+ SD+ V N ++ + +LD+ER Y + A + ++ + I V++ ND P+F + ++ E I + +V A D D + I + S F + S G + + LD E ++++++V A D ++ V +T+ DVND P+F P+F + EG +I T D D + +N ++ + N +V PLD +T Y R DG L S + +++ I D NDN+P F Y + + PV V+ V A D+D+G NG VTY I L F+I D+G + + KLDRE++S Y L+ + D G Q TS +NI++ D NDN P+F + + EN GT+V ++ A D D G N ++++ L F G ++ K +RE + Y + I +D+G LS V +++LDVNDNPP +F + T + + E +++ A+D D N + I + +F+I+ G++R + L +E Y + ++ D G M I V + D
Sbjct: 183 EVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQEN-SGPGVPVQMASSIMATDRDIESNAD-VRYRLNG---SDSIQFAV-NPRTGVITTRVSPPPSLDHERTTNYTFHVIAADQAGTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKFT-KPAFNVDVSEGVAVGSVIVNATATDPD-QGSNAAITYSMSYPGFAINSNTGSVTITRPLDRETKQ-AYSFTVHAR------------------DGGG---LESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDVGNNGHVTYAILILP--------FIIVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGV--TQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMYSLTGGDGV-FSIEPSTGQIRLQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPP--VFTSRVYERTMSEGNAAAGEF--------------VVQVNATDADVERNGHVTYTI-MHGALGMFTINETTGVIRTQGVLNRESKDFYTLIVMARDQGAVPYMDFGTIDVHVID 843 HSP 3 Score: 148.673 bits (374), Expect = 1.279e-36 Identity = 154/576 (26.74%), Postives = 265/576 (46.01%), Query Frame = 1
Query: 433 GLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDS--EITYRSADFSSQYFSVSSK-GQIFLKRPLDFETTSLHLIDVQASD-NEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREE----TXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFE------NEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPP 2118
G + + V I+V D NDN P F+ SSI ++ E +G+S+ A D D S + + + +++ F + ++ ++ + +LD E +Y L + A + ++ ++T+ + ++ND PKF + + V V E + + S+I+ A D D+ S ITY S F+++S G + + RPLD ET + V A D +N V + + D ND +PQF + + P I+ + DRD NG ++ A++ P + ++ T + DRE+ T+ + V D G + TS +++++ D NDN P F ++ YS ++ EN PV KV VTA D+D G N + Y S+ +F I+ +G + ++RE + Y + I A D+GT +S +++ ++DVNDN P F ++E N G V + ATD D NG + + ++ F G +++ +RE+ D Y L + DQG P T+ ++++D NDN P
Sbjct: 311 GTGHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAA-SIGQSVARVTANDPD-SGLNGRIFFSINSG-SEGKFEIGRSDG---VVRVSGSLDREAKAVYVLNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDPDQGSNAAITYS---MSYPGFAINSNTGSVTITRPLDRETKQAYSFTVHARDGGGLESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLAVNAEDRDV-GNNGHVTY----------AILILPFI---IVPDTGNINTSSKLDREQQSLYTLVHYVLNLSVTDHGVTQ--FTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMY------SLTGGDGVFSIEPSTGQIRLQKAINREAKENYHVTITASDRGT--PVLSSDAKVHVHVLDVNDNPPVFTS----RVYERTMSEGNAAAGEFVVQVNATDADVERNGHVTYTIMHGALGMFTINETTGVIRTQGVLNRESKDFYTLIVMARDQGAVPYMDFGTIDVHVIDKNDNTP 849 HSP 4 Score: 87.0409 bits (214), Expect = 2.317e-17 Identity = 121/453 (26.71%), Postives = 186/453 (41.06%), Query Frame = 1
Query: 217 ISEDVPLSTQMILRNLS---EKINYRFQKQLSY--FVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLY-LVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYK---LDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWN-SPADNQKTKLS----ITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDE--DSEITYRSADFSSQYFSVS-SKGQIFLKRPLDFETTSLHLIDVQASDNE---FNANTKVVITVVDVNDEAPQFNLNPSFCRIEEG-QPENIIIGQITIWDRDSE-----------AANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPI 1479
+SE V + + ++ + + N +SY F ++SNT + +D E Q Y V+ DG L+ + V + + D NDN P F T V + VG + A DRDV + VTY L I DT + + LD E+ LY L + N S D+ T+ + + I V + ND +P+F Q +Y +V EN+P+ + + V A DED +S+I Y S FS+ S GQI L++ ++ E + + + ASD +++ KV + V+DVND P F + EG + Q+ D D E A G + E + Q V+ + +SK D YT + R++ GA P TI + + D NDNTPI
Sbjct: 447 VSEGVAVGSVIVNATATDPDQGSNAAITYSMSYPGFAINSNTGSVTITRPLDRETK-----------QAYSFTVHARDGGGLESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTP-VGTIVLAVNAEDRDVGNNGH-VTYAILILPFIIVPDTGNINTS----------SKLDREQQSLYTLVHYVLNLSVTDHGVTQFTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVTMVTARDEDSGINSQIMY-SLTGGDGVFSIEPSTGQIRLQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPPVFTSRVYERTMSEGNAAAGEFVVQVNATDADVERNGHVTYTIMHGALGMFTINETTGVIRTQGVLNR---ESK------DFYTLIVMARDQ--------------GAV--PYMDFGTIDVHVIDKNDNTPI 850 HSP 5 Score: 71.633 bits (174), Expect = 1.303e-12 Identity = 61/213 (28.64%), Postives = 95/213 (44.60%), Query Frame = 1
Query: 1870 GILIAT----DNDEGDNGKLLFKLL------PNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQI---GILRVKRKLKKELIGDYNVQIIVEDNGKP-SKMHSQKILVRIQD 2466
G+LIAT D+D+G NG + + ++ P N +F G +++A+ +R+ T Y L I D G S T V I + D+NDN P +F + T +NS V G +L A+D D G+NA + ++ + +F ++ G + V L +E+ YN+ I D G P S+ LVRI D
Sbjct: 20 GVLIATVKATDSDDGANGDVDYSIVDGNVGDPRSNSDFTLDPNTGMIKTARNLERQQTFSYNLTIGAADHGLPSFSATTRVSIVVGDLNDNNP--VFNPTNYSTTVFENSPV---------------GTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKVSNHGTIEVAGNLDREVNDFYNLTITATDGGVPISRTAIAIALVRILD 215
BLAST of Protocadherin gamma vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238]) HSP 1 Score: 257.684 bits (657), Expect = 3.303e-71 Identity = 218/780 (27.95%), Postives = 364/780 (46.67%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNLNPSFCRI------EEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y I+E IG I +D+ +S S + YR + VL + I T ID E+LCP + V V + +I+++I V+D NDN P F + I S+ E + + A D D N+V +K + F L + + +P L++++ LD E+ Y + I + + + + + + V ++ND +P F++ + EV + EN PI + ++Q++A D D ++EI Y + + + + F++ S+ G I ++RPLD E T++H + V ASD + A V+I V DVND P +L I E P N I IT+ D+D++ NGK+ C+ +++ P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +++ ENN D + ++ATD+D G+N + Y+ + P S F +D +G +TA+ DRE + + + A+D GT P Q ++ + + + N +PKF + + EN + VG++ TD+D G+N + +L N NENF +G ++S FDRE Y + D G+ P S V IN++DVNDN P +I+P + + + S++ PG + + A D D G NA + I N+ +F IDP G + ++ K IG + + + + D G P +H+
Sbjct: 28 YPIREELQENVLIGNIPKDLNISHTSAATGASANLVYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSFEDAECSFEIEVVVLPNDYFR-LIKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFAIPSATDPDTGP--NSV-HKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDI-NGKVICFIEKDV----------PFHLKAVYDNQYLLETSALLDYEGTKEYNFKIVASD---SGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQ------LGPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDN--NPKFTHNHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSIL-NDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSI--------------PGSVVAEVFAVDSDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDIGLHRLVVNISDLGYPKSLHT 765 HSP 2 Score: 129.413 bits (324), Expect = 6.114e-30 Identity = 160/585 (27.35%), Postives = 258/585 (44.10%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D ++ + Q F + + +G Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F N +IE PEN IG + + ++A G + E ++ Q P + F L T R DREET V+ + +P +T+ I++T D+NDN P I +V + E +P++ K+ +T +DKD NG V I+ + + V D+ T+ L LD E Y IVA D G QT+ + + + D NDN P F P +L + EN K + L ATD D G N +++++L PN +FF L G L +++ FDRE DR+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GENAA +S+ ND + F +DP G+++ +E Y + D+G+P + K+ + + D+
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFREN----QIEVHIPENSPIGTSVVQLQATDADIGPNA--EIHYVFGTQV----SPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASD---GSSSPARATVIINVT--DVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKA---VYDNQYLLETSAL-LDYEGTKEYNFKIVASDSGKPSLNQTA--LVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPN--ASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDSDAGENAAI--SLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVIDV 667
BLAST of Protocadherin gamma vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238]) HSP 1 Score: 257.684 bits (657), Expect = 1.583e-70 Identity = 219/781 (28.04%), Postives = 364/781 (46.61%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNLNPSFCRI------EEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y I+E IG I +D+ +S S + YR + VL + I T ID E+LCP + V V + +I+++I V+D NDN P F + I S+ E + + A D D N+V +K + F L + + +P L++++ LD E+ Y + I + + + + + + V ++ND +P F++ + EV + EN PI + ++Q++A D D ++EI Y + + + + F++ S+ G I ++RPLD E T++H + V ASD + A V+I V DVND P +L I E P N I IT+ D+D++ NGK+ C+ +++ P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +++ ENN D + ++ATD+D G+N + Y+ + P S F +D +G +TA+ DRE + + + A+D GT P Q ++ + + + N +PKF + F EN + VG++ TD+D G+N + +L N NENF +G ++S FDRE Y + D G+ P S V IN++DVNDN P +I+P + + + S++ PG + + A D D G NA + I N+ +F IDP G + ++ K IG + + + + D G P +H+
Sbjct: 28 YPIREELQENVLIGNIPKDLNISHTSAATGASANLVYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSFEDAECSFEIEVVVLPNDYFR-LIKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFAIPSATDPDTGP--NSV-HKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDI-NGKVICFIEKDV----------PFHLKAVYDNQYLLETSALLDYEGTKEYNFKIVASD---SGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQ------LGPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDN--NPKFTH-NHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSIL-NDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSI--------------PGSVVAEVFAVDSDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDIGLHRLVVNISDLGYPKSLHT 765 HSP 2 Score: 129.798 bits (325), Expect = 5.878e-30 Identity = 160/585 (27.35%), Postives = 258/585 (44.10%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D ++ + Q F + + +G Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F N +IE PEN IG + + ++A G + E ++ Q P + F L T R DREET V+ + +P +T+ I++T D+NDN P I +V + E +P++ K+ +T +DKD NG V I+ + + V D+ T+ L LD E Y IVA D G QT+ + + + D NDN P F P +L + EN K + L ATD D G N +++++L PN +FF L G L +++ FDRE DR+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GENAA +S+ ND + F +DP G+++ +E Y + D+G+P + K+ + + D+
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFREN----QIEVHIPENSPIGTSVVQLQATDADIGPNA--EIHYVFGTQVS----PATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASD---GSSSPARATVIINVT--DVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKA---VYDNQYLLETSAL-LDYEGTKEYNFKIVASDSGKPSLNQTA--LVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPN--ASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDSDAGENAAI--SLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVIDV 667
BLAST of Protocadherin gamma vs. Ensembl Medaka
Match: pcdh9 (protocadherin 9 [Source:NCBI gene;Acc:101156238]) HSP 1 Score: 256.914 bits (655), Expect = 2.107e-70 Identity = 219/781 (28.04%), Postives = 364/781 (46.61%), Query Frame = 1
Query: 172 YAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS----YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVT----NDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY----RSADFSSQYFSV-SSKGQIFLKRPLDFETTSLHLIDVQASDNEFN-ANTKVVITVVDVNDEAPQFNLNPSFCRI------EEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY-GKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIF--ENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHS 2439
Y I+E IG I +D+ +S S + YR + VL + I T ID E+LCP + V V + +I+++I V+D NDN P F + I S+ E + + A D D N+V +K + F L + + +P L++++ LD E+ Y + I + + + + + + V ++ND +P F++ + EV + EN PI + ++Q++A D D ++EI Y + + + + F++ S+ G I ++RPLD E T++H + V ASD + A V+I V DVND P +L I E P N I IT+ D+D++ NGK+ C+ +++ P K Y +Y L T D E T + K++ + K L T + + + D NDN PIF + V +++ ENN D + ++ATD+D G+N + Y+ + P S F +D +G +TA+ DRE + + + A+D GT P Q ++ + + + N +PKF + F EN + VG++ TD+D G+N + +L N NENF +G ++S FDRE Y + D G+ P S V IN++DVNDN P +I+P + + + S++ PG + + A D D G NA + I N+ +F IDP G + ++ K IG + + + + D G P +H+
Sbjct: 28 YPIREELQENVLIGNIPKDLNISHTSAATGASANLVYRLVSKAGDSPLVRVLGNTGEIFTTSNRIDREKLCPGSSFEDAECSFEIEVVVLPNDYFR-LIKIKIIVKDTNDNAPMFPSPVINISIPENTL-INSRFAIPSATDPDTGP--NSV-HKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFRENQIEVHIPENSPIGTSVVQLQATDADIGPNAEIHYVFGTQVSPATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASDGSSSPARATVIINVTDVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDI-NGKVICFIEKDV----------PFHLKAVYDNQYLLETSALLDYEGTKEYNFKIVASD---SGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQ------LGPNASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDN--NPKFTH-NHFQFFVSENLPKYSTVGVITVTDSDAGENAAISLSIL-NDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLSSI--------------PGSVVAEVFAVDSDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPAPTDIGLHRLVVNISDLGYPKSLHT 765 HSP 2 Score: 129.028 bits (323), Expect = 9.190e-30 Identity = 160/585 (27.35%), Postives = 258/585 (44.10%), Query Frame = 1
Query: 784 LSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQ-YFSV----SSKG----QIFLKRPLDFETTSLHLIDVQASDN---EFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFY--GKYDLYTRVR-FDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTP------IFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPK-KLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYL-TINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+ I I V + ND P F +S+ EN INS A D D ++ + Q F + + +G Q+ +++ LD E +++ ++ D + ++ + +TV DVND P F N +IE PEN IG + + ++A G + E ++ Q P + F L T R DREET V+ + +P +T+ I++T D+NDN P I +V + E +P++ K+ +T +DKD NG V I+ + + V D+ T+ L LD E Y IVA D G QT+ + + + D NDN P F P +L + EN K + L ATD D G N +++++L PN +FF L G L +++ FDRE DR+ + D G PL V + +LD NDN P+ H + + ++ +L Y + G +D D GENAA +S+ ND + F +DP G+++ +E Y + D+G+P + K+ + + D+
Sbjct: 125 IKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYELINGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVTVTDVNDNKPVFREN----QIEVHIPENSPIGTSVVQLQATDADIGPNA--EIHYVFGTQVS----PATKRLFALNSTSGLITVQRPLDREETAIHKLSVLASD---GSSSPARATVIINVT--DVNDNPPNIDLRYIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKA---VYDNQYLLETSAL-LDYEGTKEYNFKIVASDSGKPSLNQTA--LVRVRLEDENDNPPIFTQPVIELAVMENNKRDLFLTTLSATDEDSGKNAEIVYQLGPN--ASFFDLDRKTGVLTASRVFDREDQDRFLFTVTARDNGTPPLQAQAAVIVTVLDENDNNPKFT----HNHFQFF---------VSENLPKYSTVGV----ITVTDSDAGENAAI--SLSILNDNENFILDPFSGVIKSNVSFDREQQSSYTFDVRAIDSGRPPCSSAAKVTINVIDV 667
BLAST of Protocadherin gamma vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 234.958 bits (598), Expect = 1.243e-63 Identity = 232/799 (29.04%), Postives = 364/799 (45.56%), Query Frame = 1
Query: 166 IKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTS-ILKTKTLIDLEELCPDHCPT---GEMGQLYLVVNVWDGLSLKG--IIRVEINVQDVNDNVPTFLTSSILKSVKE-VIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDT-FMLKVTND---SFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY---RSADFSSQYFSVS-SKGQIFLKRPLDFE---TTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNL--------NPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKT-FYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDIL 2472
I Y ++E QP T IG ++ D L L Y+ + Y +D T I T+ ID E L C + G+ L V+V D L +I I VQD+NDN P F S + SV E I G S+ L A DRD S+ + Y L A + T F L+V +D P L++ LD E Y+L I A + + ++ + + V + ND PKF+ YE V EN P+ ++QV+A D D + EI Y ++ D + + + G I++K PLD E + S +++ ++ T V I V D ND AP + + I E P + + + D+D E N ++C + +P DS + KY L T D E + +++ V A L+ST ++ + + D+NDN+P+F ++ V E N ++ VTATD D G N + Y I + K LF ID ++G V A LDRE + Y+ + A DKG+ + T++ I ++D NDN PKF + + EN P + VG++ D D+G+N + + P+ + F G++ S+ FDRE Y +++ D G+ P S V IN+LD NDN P + P NS+ ++ LS SP + EA DLD G NA F I+ N +F I P G + + +++ ++ G + + + V D GKP + + + + + + +
Sbjct: 24 ILYRVQEEQPPNTLIGSLAADHGLPDSGHL--------YKLEVGAPYLRVDGKTGDIFTTEIPIDRETL--RDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPL--ATDRD-SERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKD-EGENAVVTCV----VAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPA---LSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYI---KGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATV--VIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGK-FVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKP---------SNSSFRQ------LSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNETI 780
BLAST of Protocadherin gamma vs. Ensembl Medaka
Match: pcdh1a (protocadherin-1 [Source:NCBI gene;Acc:101157079]) HSP 1 Score: 236.498 bits (602), Expect = 1.291e-63 Identity = 232/799 (29.04%), Postives = 364/799 (45.56%), Query Frame = 1
Query: 166 IKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTS-ILKTKTLIDLEELCPDHCPT---GEMGQLYLVVNVWDGLSLKG--IIRVEINVQDVNDNVPTFLTSSILKSVKE-VIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDT-FMLKVTND---SFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDED--EDSEITY---RSADFSSQYFSVS-SKGQIFLKRPLDFE---TTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNL--------NPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKT-FYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDIL 2472
I Y ++E QP T IG ++ D L L Y+ + Y +D T I T+ ID E L C + G+ L V+V D L +I I VQD+NDN P F S + SV E I G S+ L A DRD S+ + Y L A + T F L+V +D P L++ LD E Y+L I A + + ++ + + V + ND PKF+ YE V EN P+ ++QV+A D D + EI Y ++ D + + + G I++K PLD E + S +++ ++ T V I V D ND AP + + I E P + + + D+D E N ++C + +P DS + KY L T D E + +++ V A L+ST ++ + + D+NDN+P+F ++ V E N ++ VTATD D G N + Y I + K LF ID ++G V A LDRE + Y+ + A DKG+ + T++ I ++D NDN PKF + + EN P + VG++ D D+G+N + + P+ + F G++ S+ FDRE Y +++ D G+ P S V IN+LD NDN P + P NS+ ++ LS SP + EA DLD G NA F I+ N +F I P G + + +++ ++ G + + + V D GKP + + + + + + +
Sbjct: 101 ILYRVQEEQPPNTLIGSLAADHGLPDSGHL--------YKLEVGAPYLRVDGKTGDIFTTEIPIDRETL--RDCRSLVKGKPCYLEFEVSVTDLLQNPSPRLIEGRIEVQDINDNTPQFPLSVLTISVPENTIMGALFSIPL--ATDRD-SERNGVADYALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGPLDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGLVTHSEGIANISEDMPVGTAVALVQVSDKD-EGENAVVTCV----VAGDVPFQLRPASDSTSDNKRKYFLQTTTPLDYERVKEYRVEIVAVDSGNPA---LSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNIVGDSYI---KGLFEIDPNTGEVKARTPLDREHKERYEFRVTAADKGSPVHKGTATV--VIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENAHVHLSVEPDGGK-FVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVVTKP---------SNSSFRQ------LSPVASPDSHVDVVEAEDLDSGPNADLVFSIAGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPPRHATALVHIYVNETI 857
BLAST of Protocadherin gamma vs. Planmine SMEST
Match: SMESG000036716.1 (SMESG000036716.1) HSP 1 Score: 1865.12 bits (4830), Expect = 0.000e+0 Identity = 967/970 (99.69%), Postives = 968/970 (99.79%), Query Frame = 1
Query: 70 MKQIKCSLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDILRLEERSKRQKSEHWTKSNKFQXXXXXXXXXXXXXXXXXXTVLCIIKPCSNRPNNRGDYSSVGRQFLCDTKSSNLEMKNEQYLFTTNFDHEKPTYIPNIYQRDSILEPQSITPNPLHTVMYPTTYSNSHYNQFYLPRSYPFNSENNEVKSTFSPIYENSNFQKYDFNTIQ 2979
MKQIKCSLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQ KYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVI VVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDS+AANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETIDDVKKVIIVCDDGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCTINITIIDVNDNSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDILRLEERSKRQKSEHWTKSNKFQIAIMISIASAILMLIFISTVLCIIKPCSNRPNNRGDYSSVGRQFLCDTKSSNLEMKNEQYLFTTNFDHEKPTYIPNIYQRDSILEPQSITPNPLHTVMYPTTYSNSHYNQFYLPRSYPFNSENNEVKSTFSPIYENSNFQKYDFNTIQ
Sbjct: 1 MKQIKCSLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQHKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVINVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSDAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETIDDVKKVIIVCDDGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCTINITIIDVNDNSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHTVCINILDVNDNPPRLIFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDILRLEERSKRQKSEHWTKSNKFQIAIMISIASAILMLIFISTVLCIIKPCSNRPNNRGDYSSVGRQFLCDTKSSNLEMKNEQYLFTTNFDHEKPTYIPNIYQRDSILEPQSITPNPLHTVMYPTTYSNSHYNQFYLPRSYPFNSENNEVKSTFSPIYENSNFQKYDFNTIQ 970
BLAST of Protocadherin gamma vs. Planmine SMEST
Match: SMESG000046654.1 (SMESG000046654.1) HSP 1 Score: 512.686 bits (1319), Expect = 8.946e-164 Identity = 315/803 (39.23%), Postives = 471/803 (58.66%), Query Frame = 1
Query: 100 LYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMIL-RNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITY----RSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITHT--VCINILDVNDNPPRLIFPDYHPKYTWID--NSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPD----IFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI 2469
+Y+ +++ L F++F+ + Y I+EN P ++G IS D+ + L + L + F+ + YF LD +S+LKT IDLE LCP C +G L LVVNVW L+G+I V+I + D NDNVP FL S +K +KE++YGVGK++EL KAID+DV++ ++ V YKL+ SDTF L+++ D+ P L L K +DYE Y L + AWN+ D K+ L I I ++++ND EP FK+ +E+ ++EN I +II++EA D+D+DS++ Y + + + F+V G++ L + LD E + I V A+D EF +N+K+ I V DVN+ P +NLNP+ +EE QP NI++GQI + D D+ NG + C EP N Q + F P KYD+++RV+ DREE + + ++C DG LTST I+L + D+NDN P+F Y I+ENN + KV++V A DKD N + Y I + + F I+ +SGW+TA +LDRE++ YQL I+A +K ++ ++ T+NI + D NDN P+ PKKLEI EN KP +G +I+ D D G+NGK +F L+ + ++F L NGSL S FDRE D YCL I +ND G P+S + T +C+NILD NDN P + + ++ N++ S I S+YE+PGF+I A D D+GENA F + D + +F ID G +++ R + +++IGDY ++II D GK S + I ++IQDI
Sbjct: 3 IYLIVWILSNSLSIVFSRFEGNLNYTIQENHPSGIQVGFISSDITQIPNIDLPKFLDSSFYFTFRDKNEYFTLDRQSSVLKTAKKIDLEILCPKFCNDDGVGFLNLVVNVWKENQLRGVINVKIVIHDQNDNVPMFLMKSFVKKIKEILYGVGKTIELPKAIDKDVTEINSRVLYKLNK--ASDTFELQISKDNTPRLRLTKDIDYETKNFYELTLIAWNNGHDELKSYLEIKIEIIDMNDCEPVFKKGLFELVLDENTKIGKLIIKLEATDKDKDSKLVYGMVSSTNSINRETFAVKETGEVILMKTLDVEFRQTYEIPVYATDGEFTSNSKIRIFVRDVNNHPPSYNLNPASLTLEENQPPNILVGQINVKDVDASDVNGDIRCQEPLGKSNLQDLKFVPDPAEYPLTVKYDMFSRVQLDREEA--PTRTIYLICHDGGLHERLTSTSVITLQVLDVNDNPPVFSIPFYKAQIKENNNIGDKVLQVVAHDKDDKENAQIKYSI-----LEGPTNFFSINPNSGWITAIRRLDREEKINYQLAILAINK-SLKALFNATTTVNIEVTDENDNVPEIYLPKKLEIMENLKPNQFIGNIISEDKDFGNNGKTVFSLINSKETDYFDLKRNGSLFSKITFDRELKDEYCLNIRVNDLG-VPISRSSTKPICVNILDDNDNAPVISVHSTLKEQDQLESKNNSQNLGSEIIKASVYENPGFKIATAVADDADKGENAQVTFTMEDITDSNQIAPLFIIDEDNGSIKISRIMSRDVIGDYKMKIIACDKGKSSLRTEKIIRIQIQDI 794
BLAST of Protocadherin gamma vs. Planmine SMEST
Match: SMESG000029841.1 (SMESG000029841.1) HSP 1 Score: 410.223 bits (1053), Expect = 2.081e-125 Identity = 292/840 (34.76%), Postives = 476/840 (56.67%), Query Frame = 1
Query: 151 QFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRF--QKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNS--PADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSS---QYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRI-EEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQG-KTPLSITHTVCINILDVNDNPPRLIFPDYHPKY--TWIDNSTVQKES--ITIDLSIYESPGFEILKCEASDLDEGENAAFHFR----ISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKIL-VRIQDILRLEERSKRQKSEHWTKSNKFQXXXXXXXXXXXXXXXXXXTVLCIIKPC 2616
+ D+ ++Y I+ENQP IGKISED+ ++ + L+ N RF ++ S F L+S + +LKTK +IDLE LCP +C + G + L VN+W +L+GI +V + + D+NDN P F S++ S+KE++Y GK+++L +A+DRDVS ++N ++YKL SD F L++ P+LV+ K +D E ++LA+ AWNS P+ N ++L I I V++IND EP F + Y + V EN P+ S++ ++ A+D D DS++ Y SAD S F + +G I L R LD+ET + + + +D EF A TK+ ++DVNDE PQFNLNP+ + E +P+ I Q+T++DRDSE NGKL C+EP NKQ V F P +++ ++ + DR+ D + ++C+D LTST T+++ + D NDN PIF + ++++EN+P + + A D D G N V Y + L + N + ID +SG + + DRE+ SFY+LII+A D+ + +Q++S ++NIT++D ND P+ + P I EN+ T +G+L A D DEG N ++F L+ + N FF L NGSL S + FDRE + + L + + D G S+ + + ILD NDN P + P++ T NS + + + +++SI+ S + I + + D D GEN + + P P++ S+D + L L ++L Y I+ D+G+P++ +K++ + + ++++ +K+N I I+++ SA L + +S +LC+I+PC
Sbjct: 33 KLDNFLQYNIEENQPAGLVIGKISEDIKRNSNPVWF-LTSDSNLRFLLSQESSLFELESKSGVLKTKQVIDLERLCPGNC-IKDKGVVNLTVNIWSPSNLQGIAKVSVIIDDINDNFPYFEQSTVEISIKEMLYTRGKTIKLPRAVDRDVSMKNNEISYKLKDS--SDYFDLEMKTKFQPVLVVLKTMDSENINQFHLALLAWNSYFPSFN-VSELKIIINVIDINDNEPFFSKPLYLIPVPENTPVGSIVHKISALDLDVDSQLRYYSADPGSLITSIFKIEIQGSIRLLRSLDYETQPFYHMSAKVTDGEFIAFTKLKFVIIDVNDETPQFNLNPTNISVFENSEPKEI--AQVTVYDRDSEDINGKLKCYEPNYSTNKQIVSFLPNINNPY---QFTIKLIRSLDRDILNGDQQYATLICEDNGIPTRLTSTFTLTINVLDRNDNRPIFTQPFVQIAVKENSPTEIPIYTFGAEDIDRGLNARVIYSV-MLNTTNDD--CCRIDENSGKLFSFKTFDREQRSFYKLIIIATDQSQIDPKQSTSISVNITVLDENDEKPQLLPPYNFTILENQPQMTYIGLLKAQDKDEGANSGIIFSLVTDINSVFFLLLKNGSLYSRRRFDREEKEEFSLDVNLEDSGLHHTNSVKSRIYVKILDQNDNAPVINLPEFEKVLFQTQSKNSELDQNNYFYRLNVSIHSSVQYPIGQIKVVDRDIGENGKVTLKLIPELQDPKVPNLLSLDEEKNELYTTSSLNRDLKDCYQYTILAMDHGRPNRRSEKKVMFCFVNQPVETPLIPEKERVSSLSKANIL-IVIILAGTSAFLTALLVSAILCMIQPC 858
BLAST of Protocadherin gamma vs. Planmine SMEST
Match: SMESG000005850.1 (SMESG000005850.1) HSP 1 Score: 385.571 bits (989), Expect = 6.741e-117 Identity = 293/863 (33.95%), Postives = 468/863 (54.23%), Query Frame = 1
Query: 70 MKQIKCSLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLSYFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKTKLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFSSQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKFIGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTDRYCLQIEINDQGKTPLSITH-TVCINILDVNDNPPRLIFPDYHPKYTWID---NSTVQKES---ITIDLSIYESPGFEILKCEASDLDEGENAAFHFRISLPNDPD----IFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDILRLEERSKRQKSEHWTKSNKFQXXXXXXXXXXXXXXXXXXTVLCIIKPCSNR 2625
M QI L ++ +FQ L ++ F FD + K+ I+ENQP +T +G+I + + E+++Y F F +D + + T +IDLE LC + C E + L VNV +L ++++ I + D++DN P F +KEVI+ + L A+D+D+S ++ + Y++ D F L+ N P L L +DYE+ K Y + A+ ++ +++T++VVNIND P+F + YE SV E++ ++ +II+V AVD D D+ + Y ++ YF +++ G++ L + LDFE +QA+D EF A +K+ ITV+DVNDE P + LNP I+E I++GQIT++DRDS + N + C E + QA+ + S Y LYT DRE D + +C D K L + ++I L + DINDN P+F + Y V ++ENN + ++ + ATD+DIG+N L+TY I + + LFVIDS +GW+ LDREK++ Y L IVA D+ + ++ S + IT++D NDN+P+ I EN G +G LIA D DEG+N +++FKL +H + GSL S + FDRE + C QI+++D + +H +VC+NILD NDN P+ IF + T I+ N+T + S + +SI E GF I +A+D D + + + + IF ID + G + + R L ++LIG V+++VED+G PS ++ I+V I DI + ++ + N F I++++S+ SA+L+LI IS ++CI+KPC+ R
Sbjct: 1 MVQIIEKLAIVLLFQFLYVYSIF--FNAFDGVQKFTIEENQPIKTFVGRIK---------FAKQIDEELSYSFGLITDIFSIDPKSGDIHTSKVIDLEALCFNSCADKESATISLNVNVNRQKTLISVMKIVIIILDIDDNKPEFEKPEFTMEIKEVIHRKNMVIYLPAAVDKDISMKNKEIAYRMSGD--HSAFNLEEHNSRGPRLRLLIDIDYEKQKQYRFTLSAYQKNDESMSANMNVTLQVVNINDCAPEFSKTIYEESVYEDISLDEIIIKVNAVDADGDN-LRYILLPMTN-YFQINNDGELHLIQKLDFEKHQSFSFTIQATDGEFVAESKLKITVLDVNDEPPSYILNPEKLVIDETNKSGILVGQITVFDRDSVSINRGIKCTETN--HETQALRLEKDQMSTDILLIYKLYTVHSLDRETIPDGIIYTNFICYDSGIKRQLYTNISIPLNVHDINDNAPLFPSSQYQVGVKENNDIGYQLFQAQATDEDIGKNALITYNI----QFSVDSGLFVIDSRTGWLKLMQPLDREKKNQYMLTIVAIDQAVHDR-KSGSTQLTITVLDDNDNAPELREYTDFSILENLPIGHYIGTLIAFDKDEGENARIMFKLSMDHLYQPLTVNKTGSLFSNQVFDREKKSKVCTQIQLSDSAIGNVLTSHVSVCVNILDENDNYPQ-IFLYEKDETTLINSLFNNTYTEHSNVDYVVKMSIREKVGFVIAVVKATDNDVNNVSQLSYYLENSASENLQQSIFDIDKKSGKITINRPLHRDLIGLQKVKVMVEDSGHPSLKSAKTIMVEILDIPQSSDKLFNVLNNPLIIGNNFMISLILSVVSALLILILISVIICIVKPCTGR 840
BLAST of Protocadherin gamma vs. Planmine SMEST
Match: SMESG000020970.1 (SMESG000020970.1) HSP 1 Score: 383.645 bits (984), Expect = 3.303e-115 Identity = 311/929 (33.48%), Postives = 484/929 (52.10%), Query Frame = 1
Query: 94 FLLYIFQC-LINLRLYYGFTQFDD-------MIKYAIKENQPGQTRIGKISEDVPLSTQMILRNLSEKINYRFQKQLS-YFVLDSNTSILKTKTLIDLEELCPDHCPTGEMGQLYLVVNVWDGLSLKGIIRVEINVQDVNDNVPTFLTSSILKSVKEVIYGVGKSMELQKAIDRDVSKEHNTVTYKLDADIYSDTFMLKVTNDSFPILVLKKALDYERCKLYNLAIWAWNSPADNQKT-KLSITIRVVNINDMEPKFKQQKYEVSVEENLPINSMIIQVEAVDEDEDSEITYRSADFS----SQYFSVSSKGQIFLKRPLDFETTSLHLIDVQASDNEFNANTKVVITVVDVNDEAPQFNLNPSFCRIEEGQPENIIIGQITIWDRDSEAANGKLSCWEPRNLYNKQAVIFKPPLDSKTFYGKYDLYTRVRFDREETXXXXXXXXXXXXXGAAKNPLTSTMTISLTIADINDNTPIFEKAVYSVSIEENNPVDAKVIKVTATDKDIGRNGLVTYEIDNLRSMNPEKSLFVIDSDSGWVTATLKLDREKESFYQLIIVAKDKGTMPKQQTSSCXXXXXXXXXXXXSPKF-IGPKKLEIFENEKPGTEVGILIATDNDEGDNGKLLFKLLPNHNENFFYLTINGSLQSAKEFDRETTD--RYCLQIEINDQG-KTPLSITHTVCINILDVNDNPPRL-IFPDYHPKYTWIDNSTVQKESITIDLSIYESPGFEILKCEASDLDEGENAAFHFR-----ISLPNDPDIFSIDPQIGILRVKRKLKKELIGDYNVQIIVEDNGKPSKMHSQKILVRIQDI-LRLEERSKRQKSEHWTKSNKFQXXXXXXXXXXXXXXXXXXTVLCIIKPCSNRPNNRGDYSSVGRQFLCDTKSSNLEMKNEQ--YLFTT-------NFDHEKPTYIPNIYQRD 2778
FLL+ L +L L + F D I Y IKENQP +G + +++P I S ++ QK+ +F L +S+L T LIDLE LC + +V V +R+ I V+DVNDN P F +S K++KE+IYG GKS++L +A D+D+S +N ++Y L S F V+ D PIL++ K LD E + L + AWN ++ T LSITI + +IND EP+F Q Y+V + EN+ +N I+Q++A D+D+ S + + ++ F++S +G I+L + LD+ET + I V+ +D EF++N +V + ++DVND APQF LNP I E ++G I ++D+DS + + C E A+ F ++ K ++Y DR++ D + +I+C+D N LT+T T++LT+ D NDN+P F Y V ++EN +I V+ATDKD G N + Y I S + + F ID +SG + LDREK+ +YQ+ +VA D + TS+ T++I +IDVND +P+ ++EN+ GT +G LIATD D G NGK +F L+P+ ++F L NGSL + FDRE+ ++ L+I + D G + LS VCI ILD NDN P++ + PD+ Y + DN+T +I +S ES I SDLD+G N F ISL ++ +F ++ +++KR ++ + V +I +D G P + S+ I+V+ DI RL +++ S K N I I++ S +L I ++C+ +PC N+ + + V R D + NL +K Q YL T+ N + E T + +I Q D
Sbjct: 14 FLLFRLSVMLFDLVLGHSFVSARDSSSLSFGTINYWIKENQPPGLVVGNLLDNLPYKQYFI----SPGYHFVLQKESEEFFSLKPGSSMLTTSKLIDLESLCGSSDCYNGTKEFQVVALVMRDKQFIQELRINIIVEDVNDNDPFFKNASYTKNIKEIIYGPGKSIDLPRAFDKDLSLINNQISYSLQET--STYFHFSVSKDGKPILIIIKELDAETIDTHRLILIAWNQNYPSRPTASLSITIVIDDINDNEPRFSQSIYKVPILENVELNHQILQLKATDKDKTSRLQFIIVPTINVEIAKTFAISDQGMIYLIKHLDYETAPKYEIPVRVTDGEFSSNGRVEVVIIDVNDCAPQFTLNPENLVISENTLSKTLLGNIVVYDQDSAYVDSGIECREGS---PNDAMRFDITENNSERTKKINIYLNQEIDRDQINGDRRFSVIICNDMGINNRLTATFTVTLTVLDANDNSPQFTLTDYVVRVKENLKPQYPLIDVSATDKDDGVNSQIKYFI----SDHTHQQYFKIDENSGKIIGIQSLDREKQDYYQVTVVATDLAINEIRHTSTATVHIHVIDVNDCAPRINESLNTFSVYENQPIGTVIGKLIATDCDIGQNGKFIFTLIPSAFSHYFELLTNGSLLTKVSFDRESLSQVKFSLRITVRDIGEEIHLSSKTAVCIKILDENDNSPKISVIPDFIAAYNYSDNNTTD---CSITVSKTESTNSPIFPFTFSDLDDGPNGQVAFSMKIYPISLKSN-QLFYLNVTEKAIKLKRSWQQSDGNRFLVTLIAKDKGSPPRETSKVIMVQFADIPPRLIDQNISMGSFSNVKINV-LIIIILVTISTVLTTALIGAIICMWQPCGNKRQSANCRNGVMR----DNANDNLRIKGYQDSYLVTSSIIDSVENDETEFKTSVSHIQQND 920 The following BLAST results are available for this feature:
BLAST of Protocadherin gamma vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Protocadherin gamma vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Protocadherin gamma vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Protocadherin gamma vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Protocadherin gamma vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Protocadherin gamma vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Protocadherin gamma vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Protocadherin gamma vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Protocadherin gamma vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Protocadherin gamma vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Protocadherin gamma vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Protocadherin gamma vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Protocadherin gamma vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Protocadherin gamma vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30030878 ID=SMED30030878|Name=Protocadherin gamma|organism=Schmidtea mediterranea sexual|type=transcript|length=3115bpback to top protein sequence of SMED30030878-orf-1 >SMED30030878-orf-1 ID=SMED30030878-orf-1|Name=SMED30030878-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=971bp MKQIKCSLFLLYIFQCLINLRLYYGFTQFDDMIKYAIKENQPGQTRIGKIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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