26S proteasome regulatory subunit 6B

Overview


Name	26S proteasome regulatory subunit 6B
Smed ID	SMED30030650
Length (bp)	1323

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of 26S proteasome regulatory subunit 6B (SMED30030650) t-SNE clustered cells

Violin plots show distribution of expression levels for 26S proteasome regulatory subunit 6B (SMED30030650) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 26S proteasome regulatory subunit 6B (SMED30030650) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 26S proteasome regulatory subunit 6B (SMED30030650) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30030650

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
muscle cell	SMED30030650	h1SMcG0004176	dd_Smed_v4_1279_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30030650	h1SMcG0004176	dd_Smed_v4_1279_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30030650	h1SMcG0004176	SMED30030650	smed_20140614	PMID:22696458 Labbé et al., 2012
reproductive organ	SMED30030650	h1SMcG0004176	Contig3852	GPL15192	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30030650	h1SMcG0009775	Contig3852	GPL15192	PMID:28434803 Rouhana et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Human
Match: PSMC4 (proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551])

HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 345/403 (85.61%), Postives = 373/403 (92.56%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L V  P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L V  P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Human
Match: PSMC4 (proteasome 26S subunit, ATPase 4 [Source:HGNC Symbol;Acc:HGNC:9551])

HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0
Identity = 315/359 (87.74%), Postives = 340/359 (94.71%), Query Frame = 3

Query:  213 YIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            ++  E ++L+  Y   +EEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   29 FLGPEPEDLEDLYSRYKEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 387

[Close]

Query:  213 YIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            ++  E ++L+  Y   +EEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   29 FLGPEPEDLEDLYSRYKEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 387

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Human
Match: PSMC1 (proteasome 26S subunit, ATPase 1 [Source:HGNC Symbol;Acc:HGNC:9547])

HSP 1 Score: 375.555 bits (963), Expect = 9.527e-127
Identity = 192/380 (50.53%), Postives = 285/380 (75.00%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ KLE+   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++GPPG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ IF   TS+M LADDV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   50 PLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 429

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Celegans
Match: rpt-3 (Probable 26S proteasome regulatory subunit 6B [Source:UniProtKB/Swiss-Prot;Acc:P46502])

HSP 1 Score: 608.986 bits (1569), Expect = 0.000e+0
Identity = 313/378 (82.80%), Postives = 347/378 (91.80%), Query Frame = 3

Query:  156 YVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            Y+K+  LE+QL  ++V E+YIK E +NL+KE LHAQEEVKRI+SVPLVIGQFLEAVD+N  IVGSTTGSNYYVR+LS +D+ELLKP  SV+LHK+SNALVDVLPPEADSSI ML+ DEKPD++Y  IGG+D+QKQEVREAVELPLTH ELY+QIGIDPPRGVLM+GPPGCGKTMLAKAVA +T A+FIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P+IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+ NVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRL+FSTV S+MNL+DDVDLE+ VARPDKISGADINSICQEAGMQAVRENRYVVL KD EK YK  VKKD ++ +FYK
Sbjct:   37 YIKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDFEFYK 414

[Close]

Query:  156 YVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            Y+K+  LE+QL  ++V E+YIK E +NL+KE LHAQEEVKRI+SVPLVIGQFLEAVD+N  IVGSTTGSNYYVR+LS +D+ELLKP  SV+LHK+SNALVDVLPPEADSSI ML+ DEKPD++Y  IGG+D+QKQEVREAVELPLTH ELY+QIGIDPPRGVLM+GPPGCGKTMLAKAVA +T A+FIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P+IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+ NVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRL+FSTV S+MNL+DDVDLE+ VARPDKISGADINSICQEAGMQAVRENRYVVL KD EK YK  VKKD ++ +FYK
Sbjct:   37 YIKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDFEFYK 414

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Celegans
Match: rpt-2 (Probable 26S proteasome regulatory subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:O16368])

HSP 1 Score: 357.066 bits (915), Expect = 7.192e-120
Identity = 178/362 (49.17%), Postives = 272/362 (75.14%), Query Frame = 3

Query:  159 VKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEK 1238
            +K+ K E+   ++ +++E+I++++  K  ++     + +V  ++  P+ +G   E +D+   IV +  GS +YV I+S +DKE L+P  SV L+  ++A++ VL  + D  +++++ ++ P  TY+ +GG+D Q QE++EAVELPLTH E Y+++GI PP+GV+++G PG GKT+LAKAVA+ T+A F+R+VGSE +QKYLG+GP+MVR++FR+A+ENAP+I+FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKV+MATNR ++LDPAL+RPGR+DRKIEFPLPD + KR IF   TS+M L  +V+LEE +   D++SGADI ++C EAG+ A+RE R  V  +DF+K
Sbjct:   63 LKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQK 424

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Celegans
Match: rpt-6 (Proteasome Regulatory Particle, ATPase-like [Source:UniProtKB/TrEMBL;Acc:Q9XTT9])

HSP 1 Score: 298.901 bits (764), Expect = 1.450e-97
Identity = 158/335 (47.16%), Postives = 227/335 (67.76%), Query Frame = 3

Query:  261 QEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKD 1265
            +EE++++      +G+  +A+D+   +V       Y V +  +ID   L   A V+L   S AL  +LP + D  ++++  ++ PD TY M+GG+D Q +E++E +ELP+ H EL+  +GI  P+GVL+FGPPG GKT+LA+AVAHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DEID+I + R +  +G D EVQR +LELLNQ+DGF+   N+KVIMATNR D LDPALLRPGR+DRKIEFP PD + +  I    + KMNL   +++ ++  +    SGA++ S+C EAGM A+RE R  V  +DFE      ++KD
Sbjct:   70 KEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKD 404

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Celegans
Match: F56F11.4 (pep chromosome:WBcel235:III:2858558:2865497:1 gene:WBGene00018991.1 transcript:F56F11.4a.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F56F11.4)

HSP 1 Score: 298.516 bits (763), Expect = 1.817e-97
Identity = 161/380 (42.37%), Postives = 244/380 (64.21%), Query Frame = 3

Query:  141 SDEE-----YYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKD 1265
            SDE+     +  K+++ E+ +    +    +  +QK L  +    +EE+  +      +G+  +A+D+   +V +     Y V + +++D   L     V+L   + A+ +VLP + D  ++++  ++ PD TY M+GG+D Q +E++E +ELP+ H EL+  +GI  P+GVL++GPPG GKT+LA+AVAHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DEID+I + R +   G D EVQR +LELLNQ+DGF+   N+KVIMATNR D LD ALLRPGR+DRKIEFP PD + +  I    + KMNL   + ++++  +    SGA++ S+C EAGM A+RE R  V  +DFE      ++KD
Sbjct:   20 SDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKD 399

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Fly
Match: Rpt3 (gene:FBgn0028686 transcript:FBtr0346274)

HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0
Identity = 343/385 (89.09%), Postives = 370/385 (96.10%), Query Frame = 3

Query:  135 QLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            +L  E+ YV+ KKL+K L+FIEVQEEYIKDEQ+NLKKEYLHAQEEVKRI+SVPLVIGQFLEAVD+NTGIVGSTTGSNYYVRILSTID+ELLKP+ASV+LHKHSNALVDVLPPEADSSI+MLQ DEKPDV+Y+ IGGMD+QKQE+REAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTA+FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ  NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FST+TSKMNL++DVDLEE VARPDKISGADIN+ICQEAGM AVRENRY+VLAKDFEKGYK  +KKD+ E +FYK
Sbjct:   29 ELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKNNIKKDEQEHEFYK 413

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Fly
Match: Rpt3 (gene:FBgn0028686 transcript:FBtr0073436)

HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0
Identity = 343/385 (89.09%), Postives = 370/385 (96.10%), Query Frame = 3

Query:  135 QLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            +L  E+ YV+ KKL+K L+FIEVQEEYIKDEQ+NLKKEYLHAQEEVKRI+SVPLVIGQFLEAVD+NTGIVGSTTGSNYYVRILSTID+ELLKP+ASV+LHKHSNALVDVLPPEADSSI+MLQ DEKPDV+Y+ IGGMD+QKQE+REAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTA+FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ  NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FST+TSKMNL++DVDLEE VARPDKISGADIN+ICQEAGM AVRENRY+VLAKDFEKGYK  +KKD+ E +FYK
Sbjct:   29 ELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKNNIKKDEQEHEFYK 413

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Fly
Match: Rpt3R (gene:FBgn0037742 transcript:FBtr0301536)

HSP 1 Score: 631.713 bits (1628), Expect = 0.000e+0
Identity = 310/383 (80.94%), Postives = 356/383 (92.95%), Query Frame = 3

Query:  138 LSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            L   + YV  KKL+ +L+ I+VQE+YIK+EQ+NLKKE++HAQEEVKRIK+VPLVIGQFLEAVDEN GIV STTGSNYYVR+LSTID+E LKP++SV LHK SN LVD++PPEADS+I+ML  DEKPD++YS IGG+DIQKQE+REAVELPLTH +LYKQIGIDPPRGVL+FGPPGCGKTMLAKAVAHHTTA+FIRVVGSEFVQKYLGEGPRMVRD+FRLAK+N+P+IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD+  N+KVIMATNRADTLDPALLRPGRLDRKIE PLPDRRQKRL+F+T+TSKMN+ +DVDLE+++ARPDKIS ADIN+ICQEAGM AVRENRYVV AKDFEKGYKT+V+KD+ + +FY
Sbjct:   22 LDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEKGYKTSVRKDEAQHEFY 404

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Fly
Match: Rpt3R (gene:FBgn0037742 transcript:FBtr0332172)

HSP 1 Score: 631.713 bits (1628), Expect = 0.000e+0
Identity = 310/383 (80.94%), Postives = 356/383 (92.95%), Query Frame = 3

Query:  138 LSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            L   + YV  KKL+ +L+ I+VQE+YIK+EQ+NLKKE++HAQEEVKRIK+VPLVIGQFLEAVDEN GIV STTGSNYYVR+LSTID+E LKP++SV LHK SN LVD++PPEADS+I+ML  DEKPD++YS IGG+DIQKQE+REAVELPLTH +LYKQIGIDPPRGVL+FGPPGCGKTMLAKAVAHHTTA+FIRVVGSEFVQKYLGEGPRMVRD+FRLAK+N+P+IIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD+  N+KVIMATNRADTLDPALLRPGRLDRKIE PLPDRRQKRL+F+T+TSKMN+ +DVDLE+++ARPDKIS ADIN+ICQEAGM AVRENRYVV AKDFEKGYKT+V+KD+ + +FY
Sbjct:   22 LDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEKGYKTSVRKDEAQHEFY 404

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Fly
Match: Rpt2 (gene:FBgn0015282 transcript:FBtr0084520)

HSP 1 Score: 374.4 bits (960), Expect = 1.443e-126
Identity = 191/369 (51.76%), Postives = 281/369 (76.15%), Query Frame = 3

Query:  159 VKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEE---VKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTV 1256
            +K+ KLE+   ++ +++E+I++ Q+ LK +    +EE   V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+ L+P  SV L+   +A+V VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++GPPG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF+  TS+M LA+DV+L EL+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  ++ +
Sbjct:   59 LKLLKLERIKDYLMMEDEFIRN-QERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVL 426

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Zebrafish
Match: psmc4 (proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083])

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 345/403 (85.61%), Postives = 371/403 (92.06%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L    P      + P     E+ Y   KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV YS IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FST+TSKMNL+++VDLE+ VARPDKISGADINSICQEAGM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALLNSRPQTGLSFLAPEPEDLEDLYSIYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L    P      + P     E+ Y   KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV YS IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FST+TSKMNL+++VDLE+ VARPDKISGADINSICQEAGM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALLNSRPQTGLSFLAPEPEDLEDLYSIYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Zebrafish
Match: psmc1a (proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730])

HSP 1 Score: 370.548 bits (950), Expect = 5.861e-125
Identity = 190/380 (50.00%), Postives = 283/380 (74.47%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ K E+   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++G PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF   TS+M +ADDV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   50 PLVTPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 429

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Zebrafish
Match: psmc1b (proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69])

HSP 1 Score: 366.696 bits (940), Expect = 1.678e-123
Identity = 188/380 (49.47%), Postives = 283/380 (74.47%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ K ++   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++G PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF   TS+M +A+DV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   50 PLVTPHTQCRLKLLKQDRIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 429

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Zebrafish
Match: psmc1a (proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730])

HSP 1 Score: 323.939 bits (829), Expect = 3.905e-106
Identity = 177/386 (45.85%), Postives = 273/386 (70.73%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP------LPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ K E+   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++G PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPG   R   +       L + + K  I + +  +M +ADDV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   89 PLVTPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGESVRSHVYSWYGFHMLIESKFKVHINALI--RMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 472

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Xenopus
Match: kiaa1456l (kiaa1456 like [Source:Xenbase;Acc:XB-GENE-985534])

HSP 1 Score: 680.248 bits (1754), Expect = 0.000e+0
Identity = 345/403 (85.61%), Postives = 371/403 (92.06%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L    P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV YS IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   18 PSLASSRPITALSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 420

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Xenopus
Match: kiaa1456l (kiaa1456 like [Source:Xenbase;Acc:XB-GENE-985534])

HSP 1 Score: 647.892 bits (1670), Expect = 0.000e+0
Identity = 326/356 (91.57%), Postives = 344/356 (96.63%), Query Frame = 3

Query:  222 DEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            DEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV YS IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   20 DEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 375

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Xenopus
Match: psmc1 (proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:733980])

HSP 1 Score: 375.941 bits (964), Expect = 3.543e-127
Identity = 192/380 (50.53%), Postives = 285/380 (75.00%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ KLE+   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++GPPG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ IF   TS+M LADDV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   32 PLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 411

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Xenopus
Match: psmc1 (proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:733980])

HSP 1 Score: 375.555 bits (963), Expect = 8.636e-127
Identity = 192/380 (50.53%), Postives = 285/380 (75.00%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ KLE+   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++GPPG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ IF   TS+M LADDV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   50 PLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 429

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Xenopus
Match: cd248 (CD248 molecule [Source:Xenbase;Acc:XB-GENE-992999])

HSP 1 Score: 294.664 bits (753), Expect = 4.225e-95
Identity = 163/405 (40.25%), Postives = 248/405 (61.23%), Query Frame = 3

Query:  132 LQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDEN--------------------TGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            L++S EE   + + L+ +++ ++ +   +  E + ++ +     E++K  K++P ++   +E +D +                      ++ ++T   Y++ ++  +D E LKP   V ++K S  +++ LP E DS +  ++ DE+P   YS IGG+D Q QE+ EA+ LP+ H E ++ +GI PP+GVLM+GPPG GKT+LA+A A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF  N  VKVI ATNR D LDPALLR GRLDRKIEFP+P+   +  I    + KMN++ DV+ EEL    D  +GA   ++C EAGM A+R     +  +D+ +G      K    L +Y
Sbjct:   35 LKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 439

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Mouse
Match: Psmc4 (proteasome (prosome, macropain) 26S subunit, ATPase, 4 [Source:MGI Symbol;Acc:MGI:1346093])

HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0
Identity = 345/403 (85.61%), Postives = 373/403 (92.56%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L V  P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Mouse
Match: Psmc4 (proteasome (prosome, macropain) 26S subunit, ATPase, 4 [Source:MGI Symbol;Acc:MGI:1346093])

HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0
Identity = 319/386 (82.64%), Postives = 352/386 (91.19%), Query Frame = 3

Query:  147 EEYYVKMKKLEKQLQFIEVQE-----EYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            EE  + ++K++ ++  + V        ++  E ++L+  Y   +EEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:    2 EEIGILVEKIQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 387

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Mouse
Match: Psmc1 (protease (prosome, macropain) 26S subunit, ATPase 1 [Source:MGI Symbol;Acc:MGI:106054])

HSP 1 Score: 375.555 bits (963), Expect = 6.540e-127
Identity = 192/380 (50.53%), Postives = 285/380 (75.00%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ KLE+   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++GPPG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ IF   TS+M LADDV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   50 PLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 429

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Mouse
Match: Psmc3 (proteasome (prosome, macropain) 26S subunit, ATPase 3 [Source:MGI Symbol;Acc:MGI:1098754])

HSP 1 Score: 295.049 bits (754), Expect = 1.918e-95
Identity = 164/405 (40.49%), Postives = 248/405 (61.23%), Query Frame = 3

Query:  132 LQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDEN--------------------TGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            L++S EE   + + L+ +++ ++ +   +  E + +K +     E++K  K++P ++   +E +D +                      ++ ++T   Y++ ++  +D E LKP   V ++K S  +++ LP E DS +  ++ DE+P   YS IGG+D Q QE+ EA+ LP+ H E ++ +GI PP+GVLM+GPPG GKT+LA+A A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF  N  VKVI ATNR D LDPALLR GRLDRKIEFP+P+   +  I    + KMN++ DV+ EEL    D  +GA   ++C EAGM A+R     +  +D+ +G      K    L +Y
Sbjct:   37 LKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYY 441

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Mouse
Match: Psmc5 (protease (prosome, macropain) 26S subunit, ATPase 5 [Source:MGI Symbol;Acc:MGI:105047])

HSP 1 Score: 290.041 bits (741), Expect = 7.100e-94
Identity = 152/322 (47.20%), Postives = 216/322 (67.08%), Query Frame = 3

Query:  300 IGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKD 1265
            +G+ + A+D+   +V       + V +   ID   + PN  V+L   S  L  +LP + D  ++++  ++ PD TY MIGG+D Q +E++E +ELP+ H EL++ +GI  P+GVL++GPPG GKT+LA+AVAHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DEID+I + R +  +G D EVQR +LELLNQ+DGF+   N+KVIMATNR D LD ALLRPGR+DRKIEFP P+   +  I    + KMNL   ++L ++       SGA++  +C EAGM A+RE R  V  +DFE      ++KD
Sbjct:   73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. UniProt/SwissProt
Match: sp|Q63570|PRS6B_RAT (26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1)

HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0
Identity = 345/403 (85.61%), Postives = 373/403 (92.56%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L V  P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. UniProt/SwissProt
Match: sp|P54775|PRS6B_MOUSE (26S proteasome regulatory subunit 6B OS=Mus musculus OX=10090 GN=Psmc4 PE=1 SV=2)

HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0
Identity = 345/403 (85.61%), Postives = 373/403 (92.56%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L V  P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. UniProt/SwissProt
Match: sp|Q4R7L3|PRS6B_MACFA (26S proteasome regulatory subunit 6B OS=Macaca fascicularis OX=9541 GN=PSMC4 PE=2 SV=1)

HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 345/403 (85.61%), Postives = 373/403 (92.56%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L V  P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. UniProt/SwissProt
Match: sp|P43686|PRS6B_HUMAN (26S proteasome regulatory subunit 6B OS=Homo sapiens OX=9606 GN=PSMC4 PE=1 SV=2)

HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 345/403 (85.61%), Postives = 373/403 (92.56%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L V  P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. UniProt/SwissProt
Match: sp|Q3T030|PRS6B_BOVIN (26S proteasome regulatory subunit 6B OS=Bos taurus OX=9913 GN=PSMC4 PE=2 SV=1)

HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0
Identity = 345/403 (85.61%), Postives = 373/403 (92.56%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P L V  P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQE+GM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. TrEMBL
Match: A0A183R534 (AAA domain-containing protein OS=Schistosoma rodhaini OX=6188 PE=3 SV=1)

HSP 1 Score: 727.243 bits (1876), Expect = 0.000e+0
Identity = 368/412 (89.32%), Postives = 394/412 (95.63%), Query Frame = 3

Query:   54 GVIPLFKSEPELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            G+ P    E E  + +  +NFGHIDPLQLS+E+ YVK+K LEKQ++FI+VQE YIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVD++TGIVGSTTGSNYYVRILSTID+ELLKP+ASV+LHKHSNALVDVLPPEADSSITMLQADEKPDV+YS IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKRLIFSTVTSKMNL+DD+DLE+ VARPDKISGADIN+ICQEAGMQAVRENRYVVLAKDFEKGYK ++KKD+ EL+FYK
Sbjct:    5 GLAPQVTKELET-IESSGINFGHIDPLQLSEEDLYVKLKILEKQIEFIQVQENYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDQSTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSITMLQADEKPDVSYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPMPDRRQKRLIFSTVTSKMNLSDDIDLEDYVARPDKISGADINAICQEAGMQAVRENRYVVLAKDFEKGYKNSLKKDEQELEFYK 415

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. TrEMBL
Match: G4V9B5 (Putative 26s protease regulatory subunit 6b OS=Schistosoma mansoni OX=6183 GN=Smp_072340 PE=3 SV=1)

HSP 1 Score: 727.243 bits (1876), Expect = 0.000e+0
Identity = 368/412 (89.32%), Postives = 394/412 (95.63%), Query Frame = 3

Query:   54 GVIPLFKSEPELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            G+ P    E E  + +  +NFGHIDPLQLS+E+ YVK+K LEKQ++FI+VQE YIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVD++TGIVGSTTGSNYYVRILSTID+ELLKP+ASV+LHKHSNALVDVLPPEADSSITMLQADEKPDV+YS IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKRLIFSTVTSKMNL+DD+DLE+ VARPDKISGADIN+ICQEAGMQAVRENRYVVLAKDFEKGYK ++KKD+ EL+FYK
Sbjct:    5 GLAPQVTKELET-IESSGINFGHIDPLQLSEEDLYVKLKILEKQIEFIQVQENYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDQSTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSITMLQADEKPDVSYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPMPDRRQKRLIFSTVTSKMNLSDDIDLEDYVARPDKISGADINAICQEAGMQAVRENRYVVLAKDFEKGYKNSLKKDEQELEFYK 415

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. TrEMBL
Match: C1LMF2 (26S proteasome regulatory subunit 6B OS=Schistosoma japonicum OX=6182 GN=Rpt3 PE=2 SV=1)

HSP 1 Score: 725.317 bits (1871), Expect = 0.000e+0
Identity = 367/412 (89.08%), Postives = 395/412 (95.87%), Query Frame = 3

Query:   54 GVIPLFKSEPELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            G+ P    EPE+ +  P +NFG+IDPLQL++E+ YVK+K L+KQ++FI+VQE YIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVD+NTGIVGSTTGSNYYVRILSTID+ELLKP+ASV+LHKHSNALVDVLPPEADSSITMLQADEKPDV+Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKRLIFST+TSKMNL+DD+DLE+ VARPDKISGADIN+ICQEAGMQAVRENRYVVLAKDFEKGYK  +KKDD EL+FYK
Sbjct:    5 GLGPQVVKEPEI-IEGPGINFGYIDPLQLNEEDLYVKLKILKKQIEFIKVQENYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSITMLQADEKPDVSYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPMPDRRQKRLIFSTITSKMNLSDDIDLEDYVARPDKISGADINAICQEAGMQAVRENRYVVLAKDFEKGYKNNLKKDDQELEFYK 415

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. TrEMBL
Match: A0A5J4NQK0 (26S proteasome regulatory subunit T3 OS=Paragonimus westermani OX=34504 GN=DEA37_0012930 PE=3 SV=1)

HSP 1 Score: 706.442 bits (1822), Expect = 0.000e+0
Identity = 353/393 (89.82%), Postives = 380/393 (96.69%), Query Frame = 3

Query:  111 NFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            NFG+IDPLQLS+++ YVK+K L+KQ++FI++QEEYIKDEQKNLKKEY HAQEEVKRIKSVPLVIGQFLEAVD+NTGI+GSTTGSNYYVRILSTID+ELLKP ASV+LHKHSNALVDVLPPEADSSI+MLQ DEKPDV Y+ IGGMD QKQE+REAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKRLIFST+TSKMNL+D+VDLE+ VARPDKISGADINSICQEAGMQAVRENRYVVLA DFEKGYK ++KK++ E +FYK
Sbjct:   23 NFGYIDPLQLSEDDLYVKLKSLKKQIEFIQIQEEYIKDEQKNLKKEYRHAQEEVKRIKSVPLVIGQFLEAVDQNTGILGSTTGSNYYVRILSTIDRELLKPGASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVGYADIGGMDTQKQEMREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPMPDRRQKRLIFSTITSKMNLSDEVDLEDYVARPDKISGADINSICQEAGMQAVRENRYVVLASDFEKGYKNSLKKNEQEFEFYK 415

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. TrEMBL
Match: A0A504YCY0 (Proteasome (Prosome macropain) 26S subunit ATPase 4 OS=Fasciola gigantica OX=46835 GN=FGIG_08057 PE=3 SV=1)

HSP 1 Score: 705.671 bits (1820), Expect = 0.000e+0
Identity = 355/404 (87.87%), Postives = 382/404 (94.55%), Query Frame = 3

Query:   78 EPELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            EPEL+     +N+G++DPL LS+++ YVK+K L+KQ++FI++QE YIKDEQKNLKKEY HAQEEVKRIKSVPLVIGQFLEAVD+NTGI+GSTTGSNYYVRILSTID+ELLK  ASV+LHKHSNALVDVLPPEADSSI MLQADEKPDV Y+ IGGMD QKQE+REAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+D+VDLE+ VARPDKISGADINSICQEAGMQAVRENRYVVLA DFEKGYK ++KK D E +FYK
Sbjct:   13 EPELQ-DNAAINYGYVDPLHLSEDDLYVKLKSLKKQIEFIQIQENYIKDEQKNLKKEYRHAQEEVKRIKSVPLVIGQFLEAVDQNTGILGSTTGSNYYVRILSTIDRELLKAGASVALHKHSNALVDVLPPEADSSIAMLQADEKPDVAYADIGGMDTQKQEMREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSDEVDLEDYVARPDKISGADINSICQEAGMQAVRENRYVVLASDFEKGYKNSLKKSDQEFEFYK 415

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Cavefish
Match: psmc4 (proteasome 26S subunit, ATPase 4 [Source:NCBI gene;Acc:103032828])

HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 344/403 (85.36%), Postives = 372/403 (92.31%), Query Frame = 3

Query:   81 PELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P +    P      + P     E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+TSKMNL+++VDLE+ VARPDKISGADINSICQEAGM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   18 PAVLASRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLSSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 420

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Cavefish
Match: psmc1a (26S proteasome regulatory subunit 4 [Source:NCBI gene;Acc:103036290])

HSP 1 Score: 372.859 bits (956), Expect = 7.112e-126
Identity = 191/380 (50.26%), Postives = 284/380 (74.74%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ K E+   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++GPPG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF   TS+M +ADDV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   50 PLVTPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 429

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Cavefish
Match: psmc1b (26S proteasome regulatory subunit 4-like [Source:NCBI gene;Acc:103037200])

HSP 1 Score: 371.703 bits (953), Expect = 3.834e-125
Identity = 190/380 (50.00%), Postives = 284/380 (74.74%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ K E+   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++GPPG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ IF   TS+M +ADDV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   70 PLVTPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 449

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Cavefish
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:103027731])

HSP 1 Score: 289.656 bits (740), Expect = 6.484e-94
Identity = 152/322 (47.20%), Postives = 216/322 (67.08%), Query Frame = 3

Query:  300 IGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKD 1265
            +G+ + A+D+   +V       + V +   ID   + PN  V+L   S  L  +LP + D  ++++  ++ PD TY MIGG+D Q +E++E +ELP+ H EL++ +GI  P+GVL++GPPG GKT+LA+AVAHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DEID+I + R +  +G D EVQR +LELLNQ+DGF+   N+KVIMATNR D LD ALLRPGR+DRKIEFP P+   +  I    + KMNL   ++L ++       SGA++  +C EAGM A+RE R  V  +DFE      ++KD
Sbjct:   73 VGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Cavefish
Match: psmc3 (proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:103037375])

HSP 1 Score: 286.96 bits (733), Expect = 4.552e-93
Identity = 157/361 (43.49%), Postives = 227/361 (62.88%), Query Frame = 3

Query:  264 EEVKRIKSVPLVIGQFLEAVDEN--------------------TGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            E++K  K++P ++   +E +D +                      ++ ++T   Y++ ++  +D E LKP   V ++K S  +++ LP E DS +  ++ DE+P   YS IGG+D Q QE+ EA+ LP+ H E ++ +GI PP+GVLM+GPPG GKT+LA+A A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF  N+ VKVI ATNR D LDPALLR GRLDRKIEFP+P+   +  I    + KMN++ DV+ EEL    D  +GA   ++C EAGM A+R     +  +D+ +G      K    L +Y
Sbjct:   24 EKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKANLQYY 384

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006168.1 (pep scaffold:Pmarinus_7.0:GL486395:211235:217029:-1 gene:ENSPMAG00000005566.1 transcript:ENSPMAT00000006168.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 567.77 bits (1462), Expect = 0.000e+0
Identity = 290/319 (90.91%), Postives = 311/319 (97.49%), Query Frame = 3

Query:  174 LEKQLQFIE-VQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELV 1127
            +++ L F++ VQEEYIKDEQKNLKKEYLHAQEEVKRI+S+PLVIGQFLEAVD+NTGIVGSTTGSNYYVRILSTID+ELLKP+ASV+LHKHSNALVDVLPPEADSSITML AD+KPDVTY  IGGMDIQKQEVREAVELPLTHF+LYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ VNVKVIMATNRADTLDPALLRPGRLDRKIEFP+PDRRQKRLIFSTVT+KMNL+++VDLE+ +
Sbjct:    1 VQQLLSFLDRVQEEYIKDEQKNLKKEYLHAQEEVKRIQSIPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSITMLTADQKPDVTYVDIGGMDIQKQEVREAVELPLTHFDLYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPMPDRRQKRLIFSTVTAKMNLSEEVDLEDCI 319

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010299.1 (pep scaffold:Pmarinus_7.0:GL479893:343:6144:1 gene:ENSPMAG00000009320.1 transcript:ENSPMAT00000010299.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 296.59 bits (758), Expect = 3.725e-97
Identity = 164/405 (40.49%), Postives = 246/405 (60.74%), Query Frame = 3

Query:  132 LQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDEN--------------------TGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            L++  EE   + + L+ +++ ++ +   I  E   +K++     E++K  K++P ++   +E +D +                      ++ ++T   Y++ ++  +D E LKP   V ++K S  +++ LP E DS +  ++ DE+P   YS +GG+D Q QE+ EA+ LP+TH E ++ +GI PP+GVLM+GPPG GKT+LA+A A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP IIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF  N  VKVI ATNR D LDPALLR GRLDRKIEFP+P+   +  I    + KMN++ DV+ EEL    D  +GA   ++C EAGM A+R     +  +D+  G      K    L +Y
Sbjct:   10 LKMGTEEIIQRTRLLDNEIKIMKSETMRINHELTAMKEKIKENTEKIKVNKTLPYLVSNVIELLDVDPTEQEEDGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDVGGLDKQIQELVEAIVLPMTHKERFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMDGILEVQAKKKANLQYY 414

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Sea Lamprey
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547])

HSP 1 Score: 293.123 bits (749), Expect = 7.162e-96
Identity = 155/335 (46.27%), Postives = 224/335 (66.87%), Query Frame = 3

Query:  261 QEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKD 1265
            +EE++ ++     +G+ ++ +D+   +V       + V I   ID   + PN  V+L   S  L  +LP + D  ++++  ++ PD TY MIGG+D Q +E++E +ELP+ H EL++ +GI  P+GVL++GPPG GKT+LA+AVAHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DEID+I + R +  +G D EVQR +LELLNQ+DGF+   N+KVIMATNR D LDPALLRPGR+DRKIEFP P+   +  I    + KMNL   ++L ++       SGA++  +C EAGM A+RE R  V  +DFE      ++KD
Sbjct:   64 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 398

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001244.1 (pep scaffold:Pmarinus_7.0:GL482260:6416:9764:-1 gene:ENSPMAG00000001115.1 transcript:ENSPMAT00000001244.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 275.404 bits (703), Expect = 1.562e-88
Identity = 145/266 (54.51%), Postives = 186/266 (69.92%), Query Frame = 3

Query:  462 LPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVK 1259
            LPP+ D ++TM+Q +EKPDVTYS +GG   Q +++RE VE PL H E +  +GI+PP+GVL+FGPPG GKT+ A+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F +A++    +IF DEIDAI   RFD   G D EVQR +LEL+NQ+DGFD   N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD   +  IF      M++  D+  E L       +GA+I S+C EAGM A+R  R V   KDF +     +K
Sbjct:  163 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARK--ACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFGLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIK 426

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Sea Lamprey
Match: vcp (valosin containing protein [Source:NCBI gene;Acc:327197])

HSP 1 Score: 179.489 bits (454), Expect = 7.101e-52
Identity = 108/273 (39.56%), Postives = 160/273 (58.61%), Query Frame = 3

Query:  387 TIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVREN 1205
            TID E++  + +V++     AL    P      +      E P+VT+  IGG++  K+E++E V+ P+ H E + + G+ P +GVL +GPPGCGKT+LAKA+A+   A FI + G E +  + GE    VRDVF  A++ +P ++F+DE+D+IA  R            R++ ++L +MDG   N NV +I ATNR D +DPA+LRPGRLD+ I  PLPD + +  I      K  +A DVD+  L    +  SGAD+  ICQ A   A+RE+
Sbjct:   76 TIDAEIMN-SLAVTMDDFRWALAQSNPSALREMVV-----EVPNVTWEDIGGLESVKRELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQASPTVLFLDELDSIAKARGGGVGDGGGAADRVINQILTEMDGMGVNKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRTAILKANLRKSPIAKDVDIGYLSKTTNGFSGADLMEICQRACKLAIRES 342

HSP 2 Score: 52.373 bits (124), Expect = 1.040e-7
Identity = 25/70 (35.71%), Postives = 41/70 (58.57%), Query Frame = 3

Query: 1008 GRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVV 1217
            GR DR+++  +PD   +  I    T  M L+ DVDLE++  +     GAD+ ++C EA +QA+R+   V+
Sbjct:    1 GRFDREVDIGIPDSTGRLEILQIHTKNMKLSVDVDLEQIANQTHGHVGADLAALCSEAALQAIRKKMDVI 70

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Yeast
Match: RPT3 (ATPase of the 19S regulatory particle of the 26S proteasome; one of ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; substrate of N-acetyltransferase B [Source:SGD;Acc:S000002802])

HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0
Identity = 273/385 (70.91%), Postives = 333/385 (86.49%), Query Frame = 3

Query:  144 DEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDD--HELDFYK 1289
            + + Y K+KKLEK+ + + +QE+YIKDEQ++LK+E   AQEEVKRI+SVPLVIGQFLE +D+NTGIV STTG +Y VRILST+D+ELLKP+ SV+LH+HSNALVD+LPP++DSSI+++  +EKPDVTY+ +GG+D+QKQE+REAVELPL   +LY+QIGIDPPRGVL++GPPG GKTML KAVA+ T AAFIRV GSEFV KYLGEGPRMVRDVFRLA+ENAP+IIFIDE+D+IATKRFDAQTG+DREVQRIL+ELL QMDGFDQ+ NVKVIMATNRADTLDPALLRPGRLDRKIEFP L DRR++RLIF T+ SKM+LA + DL+ L+ R D +SGA I +I QEAG++AVR+NRYV+L  D E+ Y T VK D+   + DFYK
Sbjct:   44 NSDIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVKTDNTVDKFDFYK 428

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Yeast
Match: RPT2 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle; N-myristoylation of Rpt2p at Gly2 is involved in regulating the proper intracellular distribution of proteasome activity by controlling the nuclear localization of the 26S proteasome [Source:SGD;Acc:S000002165])

HSP 1 Score: 352.443 bits (903), Expect = 6.493e-119
Identity = 186/369 (50.41%), Postives = 274/369 (74.25%), Query Frame = 3

Query:  159 VKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVK 1259
            +K+ ++E+    + ++EE++ + +  K  +K+    +++++ I+  PL IG   E +D++  IV S T  +YYV ILS +DKELL+P  SV LH  + ++V VL  +AD  +++++ D+ P  +YS IGG++ Q QE++E+VELPLTH ELY+++GI PP+GV+++G PG GKT+LAKAVA+ T+A F+R+VGSE +QKYLG+GPR+ R +F++A ENAP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATN+ +TLDPAL+RPGR+DRKI F  PD   K+ I    TSKMNL++DV+LE LV   D +SGADI ++C EAG+ A+RE R  V A+DF++  +  +K
Sbjct:   57 LKLLRMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMK 425

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Yeast
Match: RPT6 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003016])

HSP 1 Score: 284.648 bits (727), Expect = 8.609e-93
Identity = 157/363 (43.25%), Postives = 233/363 (64.19%), Query Frame = 3

Query:  147 EEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFE 1235
            +E  +K++   + ++ +E Q   + D+ + +K E    QE           +G+ ++ V +   +V       Y V +   I+ + LK +  V L   S  L  VL  +AD  ++++  ++ PD TY M+GG+  Q +E++E +ELP+ H EL++ +GI  P+GV+++GPPG GKT+LA+AVAHHT   FIRV G+E VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R +   G D EVQR +LELLNQ+DGF+ + N+K+IMATNR D LDPALLRPGR+DRKIEFP P    +  I    + KMNL   ++L ++  + +  SGAD+  +C EAGM A+RE R  V  +DFE
Sbjct:   28 QETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGS-------YVGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 383

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Yeast
Match: RPT5 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; recruited to the GAL1-10 promoter region upon induction of transcription; similar to human TBP1 [Source:SGD;Acc:S000005643])

HSP 1 Score: 280.796 bits (717), Expect = 5.095e-91
Identity = 159/411 (38.69%), Postives = 240/411 (58.39%), Query Frame = 3

Query:  132 LQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDEN--------------------------TGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            L LS +E   + K L+ +++    + + +  E   + ++    +E++K  + +P ++   +E +D N                            +V +++    ++ ++  +D + LKPN  V ++K S  ++D LP E DS +  ++ DEKP  TYS +GG+D Q +E+ EA+ LP+   + +K +GI  P+G LM+GPPG GKT+LA+A A  T A F+++   + VQ Y+GEG ++VRD F LAKE AP IIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF  +  VKV+ ATNR D LDPALLR GRLDRKIEFPLP    +  I    + KM   DD++ +EL    D+ +GA + ++  EAGM A+R  +  V  +DF +G      +    + FY
Sbjct:   23 LNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYLVANVVEVMDMNEIEDKENSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFY 433

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Yeast
Match: RPT4 (ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in degradation of ubiquitinated substrates; contributes preferentially to ERAD; required for spindle pole body duplication; mainly nuclear localization [Source:SGD;Acc:S000005785])

HSP 1 Score: 264.618 bits (675), Expect = 1.026e-84
Identity = 150/355 (42.25%), Postives = 227/355 (63.94%), Query Frame = 3

Query:  231 KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYK--TTVKKDDHELDFYK 1289
            ++L+K Y   + ++K ++S+  +IG+ ++ + E   IV +++G  Y V + +++D+  LK    V+L   +  ++ +LP E D  +  + + E+ ++T+  IGG+  Q +E+RE +ELPL + E+++++GI PP+GVL++GPPG GKT+LAKAVA    A FI    S  V KY+GE  R++R++F  AKE+ P IIF+DE+DAI  +RF   T ADRE+QR L+ELL QMDGFD     K+IMATNR DTLDPALLRPGRLDRK+E PLP+   +  IF   T+K+    + D E  V   D  +GADI +   EAG  A+R++R  +   D  K  +    VKK +  +++ K
Sbjct:   82 RDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQK 436

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Nematostella
Match: EDO43481 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RYL2])

HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0
Identity = 338/387 (87.34%), Postives = 368/387 (95.09%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P+    ++ Y+  KKLEKQL+F+EVQEEYIKDEQKNLKKE LHAQEEVKRI+SVPLVIGQFLEAVD+NTGIV STTGSNYYVRILSTIDKELLKP+ASV+LHKHSNALVD+LPPEADSSI ML  +EKP+V+Y+ IGGMDIQKQE+REAVELPLTHFELYKQIGIDPPRGVL++GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+T+KMNL+++VDLE+ VARPDKISGADIN++CQEAGMQAVRENRY++LAKDFEKGYK  VKKD+ E +FYK
Sbjct:   31 PVDPEMDDLYITYKKLEKQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDLEDYVARPDKISGADINAVCQEAGMQAVRENRYIILAKDFEKGYKNNVKKDEQEHEFYK 417

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Nematostella
Match: EDO26554 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TBQ1])

HSP 1 Score: 577.785 bits (1488), Expect = 0.000e+0
Identity = 292/327 (89.30%), Postives = 316/327 (96.64%), Query Frame = 3

Query:  147 EEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELV 1127
            ++ Y+  KKLEKQL+F+EVQEEYIKDEQKNLKKE LHAQEEVKRI+SVPLVIGQFLEAVD+NTGIV STTGSNYYVRILSTIDKELLKP+ASV+LHKHSNALVD+LPPEADSSI ML  +EKP+V+Y+ IGGMDIQKQE+REAVELPLTHFELYKQIGIDPPRGVL++GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST+T+KMNL+++VDLE+ +
Sbjct:   11 DDLYITYKKLEKQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITNKMNLSEEVDLEDCI 337

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Nematostella
Match: EDO49524 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGH4])

HSP 1 Score: 296.204 bits (757), Expect = 5.944e-97
Identity = 165/381 (43.31%), Postives = 246/381 (64.57%), Query Frame = 3

Query:  147 EEYYV-KMKKLE-------KQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKD 1265
            ++YY+ K+++L+       K L+ +E Q   +  + + L++E    QE+          +G+ ++ +D+   +V       + V I   ID   + PN  V+L   S  L  +LP + D  ++++  ++ PD TY M+GG+D Q +E++E +ELP+ H EL++ +GID P+GVL++GPPG GKT+LA+AVAHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DEID+I + R +  +G D EVQR +LELLNQ+DGF+   N+KVIMATNR D LD ALLRPGR+DRKIEFP P+   ++ I    + KMNL   ++L+++       SGA+I  +C EAGM A+RE R  V  +DFE      ++KD
Sbjct:   13 QQYYITKIEELQLVVTEKIKNLRRLEAQRNELNAKVRMLREELQLLQEQGS-------YVGEVVKPMDKKKVLVKVHPEGKFVVDIDKGIDMAEVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARQDILKIHSRKMNLTRGINLKKIAELMPGASGAEIKGVCTEAGMYALRERRVHVTQEDFEMAVTKVMQKD 386

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Nematostella
Match: EDO37502 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFP4])

HSP 1 Score: 286.96 bits (733), Expect = 5.644e-93
Identity = 161/406 (39.66%), Postives = 251/406 (61.82%), Query Frame = 3

Query:  132 LQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDEN---------------------TGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            L++S +E   + + L+ +++ ++ +   I  EQ+ +K++     E++K  K++P ++   +E +D +                       ++ ++T   Y++ ++  ++ E L P   V ++K S  +++ LP E DS +  ++ DE+P   YS IGG+D Q QE+ EA+ LP+TH + ++ +GI PP+GVL++GPPG GKT+LA+A A  T + F+++ G + VQ ++G+G ++VRD F LAKE APAIIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF  + ++KVI ATNR D LDPALLR GRLDRKIEFP PD+  +  I    + KMN++ DV+ +EL    D  +GA + ++C EAGM A+R     V  +D+  G      K    L +Y
Sbjct:   22 LRMSTDEIVSRARLLDNEIKIMKSEIMRISHEQQAMKEKIKENSEKIKVNKTLPYLVSNVIELLDVDPQDYAEEDGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVEPENLTPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGLDQQIQELVEAIVLPMTHKDRFENLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSHHDIKVIAATNRVDILDPALLRSGRLDRKIEFPNPDQEARARILQIHSRKMNVSGDVNFDELSRCTDDFNGAMLKAVCVEAGMIALRREATEVCHEDYMDGIMEVNAKKKANLVYY 427

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Nematostella
Match: EDO34160 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQ60])

HSP 1 Score: 282.337 bits (721), Expect = 1.036e-91
Identity = 157/358 (43.85%), Postives = 235/358 (65.64%), Query Frame = 3

Query:  216 IKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTV--KKDDHELDF 1283
            ++++ K+  KEY  ++ ++K ++SV  ++G+ L+ + E   IV +T G  Y V     +DK  LK    V+L   +  ++  LP E D  +  +  ++  +++YS +GG+  Q +E+RE +ELPLT+ EL++++GI PP+G L+FGPPG GKT+LA+AVA    A F++VV S  V KY+GE  R++R++F  A+++ P IIF+DEIDAI  +RF   T ADRE+QR L+ELLNQMDGFD    VK+IMATNR DTLDPALLRPGRLDRKIE  LP+ + +  I    +S++    ++D E +V   D  +GAD+ ++C EAGM A+R  R  V+ +DF K  +     KK + +LD+
Sbjct:   31 MREQLKDFTKEYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFGYARDHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDVLGQVKMIMATNRPDTLDPALLRPGRLDRKIEIALPNEQARMDILKIHSSRITKHGEIDYEAVVKLSDGFNGADLRNVCTEAGMFAIRGERDYVIEEDFMKAVRKVSDNKKLESKLDY 388

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Medaka
Match: psmc4 (proteasome 26S subunit, ATPase 4 [Source:NCBI gene;Acc:101162317])

HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 347/409 (84.84%), Postives = 378/409 (92.42%), Query Frame = 3

Query:   63 PLFKSEPELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            P+  S P+       L+F   +P  L  E+ Y + KKL+++L+F+EVQEEYIKDEQKNLKKE+LHAQEEVKRI+S+PLVIGQFLEAVD+NT IVGSTTGSNYYVRILSTID+ELLKPNASV+LHKHSNALVDVLPPEADSSI ML +D+KPDV Y+ IGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM+GPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FST+TSKMNL+++VDLE+ VARPDKISGADINSICQEAGM AVRENRY+VLAKDFEK YKT +KKD+ E +FYK
Sbjct:   16 PVLSSRPQTG-----LSFLTPEPEDL--EDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 417

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Medaka
Match: psmc1a (proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:101161360])

HSP 1 Score: 372.859 bits (956), Expect = 6.546e-126
Identity = 191/380 (50.26%), Postives = 284/380 (74.74%), Query Frame = 3

Query:  129 PLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQ--KNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKK 1262
            PL     +  +K+ K E+   ++ ++EE+I++++  K L+++    + +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK+LL+P  SV L+   +A++ VL  + D  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH E Y+++GI PP+GV+++GPPG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+E+AP+I+FIDEIDAI TKR+D+ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IF   TS+M +ADDV L++L+   D +SGADI +IC EAG+ A+RE R  V  +DF+K  +  + K
Sbjct:   53 PLITPHTQCRLKLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYK 432

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Medaka
Match: psmc3 (proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:100301600])

HSP 1 Score: 293.893 bits (751), Expect = 2.445e-95
Identity = 164/405 (40.49%), Postives = 249/405 (61.48%), Query Frame = 3

Query:  132 LQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDEN--------------------TGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            L++S EE   + + L+ +++ ++ +   +  E + +K +     E++K  K++P ++   +E +D +                      ++ ++T   Y++ ++  +D E LKP   V ++K S  +++ LP E DS +  ++ DE+P   YS IGG+D Q QE+ EA+ LP+ H E ++ +GI PP+GVLM+GPPG GKT+LA+A A  T A F+++ G + VQ ++G+G ++VRD F LAKE AP+IIFIDE+DAI TKRFD++   DREVQR +LELLNQ+DGF  N+ VKVI ATNR D LDPALLR GRLDRKIEFP+P+   +  I    + KMN++ DV+ EEL    D  +GA   ++C EAGM A+R     +  +D+ +G      K    L +Y
Sbjct:   22 LKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKKTNLQYY 426

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Medaka
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:101158979])

HSP 1 Score: 288.115 bits (736), Expect = 2.145e-93
Identity = 151/322 (46.89%), Postives = 215/322 (66.77%), Query Frame = 3

Query:  300 IGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKD 1265
            +G+ +  +D+   +V       + V +   ID   + PN  V+L   S  L  +LP + D  ++++  ++ PD TY MIGG+D Q +E++E +ELP+ H EL++ +GI  P+GVL++GPPG GKT+LA+AVAHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DEID+I + R +  +G D EVQR +LELLNQ+DGF+   N+KVIMATNR D LD ALLRPGR+DRKIEFP P+   +  I    + KMNL   ++L ++       SGA++  +C EAGM A+RE R  V  +DFE      ++KD
Sbjct:   65 VGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 386

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Medaka
Match: psmc5 (proteasome 26S subunit, ATPase 5 [Source:NCBI gene;Acc:101158979])

HSP 1 Score: 288.115 bits (736), Expect = 2.794e-93
Identity = 151/322 (46.89%), Postives = 215/322 (66.77%), Query Frame = 3

Query:  300 IGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKD 1265
            +G+ +  +D+   +V       + V +   ID   + PN  V+L   S  L  +LP + D  ++++  ++ PD TY MIGG+D Q +E++E +ELP+ H EL++ +GI  P+GVL++GPPG GKT+LA+AVAHHT   FIRV GSE VQK++GEG RMVR++F +A+E+AP+IIF+DEID+I + R +  +G D EVQR +LELLNQ+DGF+   N+KVIMATNR D LD ALLRPGR+DRKIEFP P+   +  I    + KMNL   ++L ++       SGA++  +C EAGM A+RE R  V  +DFE      ++KD
Sbjct:   73 VGEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD 394

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Planmine SMEST
Match: SMESG000022591.1 (SMESG000022591.1)

HSP 1 Score: 815.068 bits (2104), Expect = 0.000e+0
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 3

Query:   48 MEGVIPLFKSEPELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 1289
            MEGVIPLFKSEPELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK
Sbjct:    1 MEGVIPLFKSEPELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFYK 414

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Planmine SMEST
Match: SMESG000065667.1 (SMESG000065667.1)

HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0
Identity = 263/379 (69.39%), Postives = 327/379 (86.28%), Query Frame = 3

Query:  150 EYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            ++Y  MK LE +++ +E +E Y+K+E +NLK +Y + +EEVKRI+S PL +GQF++A+D ++GIV +    NYYV ILST+DKELL  NA+V+L+K S ALVD+L PE+DSSI +L+ DEKPDVT+SMIGG+D QKQE+REA+ELPLT+  L+KQ+GID PRGVLM+GPPGCGKTMLAKAVA+ T A FIR  GSEFVQKYLG+GP+MVRD+F+LAK NAP+IIFIDEID+IAT+RFD++TGADREVQRIL+ELL QMDGFDQ+VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD+RQKR++FSTVTSKMNL+ D+DL+E  +R D+ISGADINSICQEAGM A+R+NRY +  KDFE  YKT ++KD+   +FY
Sbjct:   15 DHYKDMKSLESEIEVLESREVYLKEEYRNLKNQYGYLKEEVKRIQSTPLAVGQFIQAIDNDSGIVNTECDKNYYVPILSTLDKELLTKNATVALNKGSKALVDILIPESDSSIKVLRDDEKPDVTFSMIGGLDTQKQEMREAIELPLTNPGLFKQLGIDAPRGVLMYGPPGCGKTMLAKAVANETNATFIRANGSEFVQKYLGDGPKMVRDIFKLAKLNAPSIIFIDEIDSIATRRFDSKTGADREVQRILIELLTQMDGFDQSVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDKRQKRMVFSTVTSKMNLSLDIDLDEFASRNDQISGADINSICQEAGMLAIRDNRYQITIKDFEAAYKTALRKDEEMPEFY 393

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Planmine SMEST
Match: SMESG000065715.1 (SMESG000065715.1)

HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0
Identity = 261/381 (68.50%), Postives = 326/381 (85.56%), Query Frame = 3

Query:  144 DEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYKTTVKKDDHELDFY 1286
            + ++Y  MK LE +++ +E +E Y+K+E +NLK +Y   +EEVKRI+S PL +GQF++A+D ++GIV +    NYYV ILST+DKELL  NA+V+L+K S ALV++L PE+DSSI +L+ DEKPDVT+SMIGG+D QKQE+REA+ELPLT+  L+KQ+GID PRGVLM+GPPGCGKTMLAKAVA+ T A FIR  GSEFVQKYLG+GP+MVRD+F+LAK NAP+IIFIDEID+IAT+RFD++TGADREVQRIL+ELL QMDGFDQ+VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD+RQKR++FSTVT+KMNL+ D+DL+E  +R D ISGADINSICQEAGM A+R+NRY +  KDFE  YKT ++KD+   +FY
Sbjct:   13 ESDHYKDMKSLESEIEVLESREVYLKEEYRNLKNQYGFLKEEVKRIQSTPLAVGQFIQAIDNDSGIVNTECDKNYYVPILSTLDKELLTKNATVALNKGSKALVEILIPESDSSIKVLRDDEKPDVTFSMIGGLDTQKQEMREAIELPLTNPGLFKQLGIDAPRGVLMYGPPGCGKTMLAKAVANETNATFIRANGSEFVQKYLGDGPKMVRDIFKLAKLNAPSIIFIDEIDSIATRRFDSKTGADREVQRILIELLTQMDGFDQSVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDKRQKRMVFSTVTNKMNLSLDIDLDEFASRNDPISGADINSICQEAGMLAIRDNRYQITIKDFEAAYKTALRKDEEMPEFY 393

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Planmine SMEST
Match: SMESG000065666.1 (SMESG000065666.1)

HSP 1 Score: 464.922 bits (1195), Expect = 3.070e-163
Identity = 231/334 (69.16%), Postives = 290/334 (86.83%), Query Frame = 3

Query:  141 SDEEYYVKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDK 1142
             + ++Y  MK LE +++ +E +E Y+K+E +NLK +Y + +EEVKRI+S PL +GQF++A+D ++GIV +    NYYV ILST+DKELL  NA+V+L+K S ALV++L PE+DSSI +L+ DEKPDVT+SMIGG+D QKQE+REA+ELPLT+  L+KQ+GID PRGVLM+GPPGCGKTMLAKAVA+ T A FIR  GSEFVQKYLG+GP+MVRD+F+LAK NAP+IIFIDEID+IAT+RFD++TGADREVQRIL+ELL QMDGFDQ+VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD+RQKR++FSTVTSKMNL+ D+DL+E  +R D+
Sbjct:   12 CESDHYKDMKSLESEIEVLESREVYLKEEYRNLKNQYGYLKEEVKRIQSTPLAVGQFIQAIDNDSGIVNTECDKNYYVPILSTLDKELLTKNATVALNKGSKALVEILIPESDSSIKVLRDDEKPDVTFSMIGGLDTQKQEMREAIELPLTNPGLFKQLGIDAPRGVLMYGPPGCGKTMLAKAVANETNATFIRANGSEFVQKYLGDGPKMVRDIFKLAKLNAPSIIFIDEIDSIATRRFDSKTGADREVQRILIELLTQMDGFDQSVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDKRQKRMVFSTVTSKMNLSLDIDLDEFASRNDQ 345

[Close]

BLAST of 26S proteasome regulatory subunit 6B vs. Planmine SMEST
Match: SMESG000020306.1 (SMESG000020306.1)

HSP 1 Score: 379.022 bits (972), Expect = 1.315e-128
Identity = 192/363 (52.89%), Postives = 280/363 (77.13%), Query Frame = 3

Query:  159 VKMKKLEKQLQFIEVQEEYIKDEQKNLKKEYLHAQE--EVKRIKSVPLVIGQFLEAVDENTGIVGSTTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITMLQADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMFGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENXXXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNLADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKG 1241
            +++ KLE+   ++ ++EE+IK++++    E  H +E  +V  ++  P+ +G   E +D+N  IV ++ GS +YV ILS +DK++L+PN SV L+   +A+V VL  +AD  +T+++ ++ P  TY+ IGG+D Q QE++E+VELPLTH ELY+++GI PP+GV+++G PG GKT+LAKAVA+ T+A F+RVVGSE +QKYLG+GP++VR++FR+A+ENAP+I+FIDEIDA+ TKR+++ +G +RE+QR +LELLNQ+DGFD   +VKVIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR IFS  TSKM L++DV++E  V   D +SGADI +IC EAG+ A+RE R  V  +DF+K 
Sbjct:   54 LRLLKLERIKDYLLMEEEFIKNQERLKTDEEKHEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDMLEPNCSVLLNHKVHAVVGVLIDDADPMVTVMKLEKAPQETYADIGGLDSQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEENAPSIVFIDEIDAVGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFSIHTSKMTLSEDVNVESYVMSKDDLSGADIKAICTEAGLLALRERRMRVTNEDFKKA 416

The following BLAST results are available for this feature:

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Human
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Celegans
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Fly
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Zebrafish
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Xenopus
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Mouse
BLAST of 26S proteasome regulatory subunit 6B vs. UniProt/SwissProt
BLAST of 26S proteasome regulatory subunit 6B vs. TrEMBL
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Cavefish
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Sea Lamprey
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Yeast
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Nematostella
BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Medaka
BLAST of 26S proteasome regulatory subunit 6B vs. Planmine SMEST

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
PSMC4	0.000e+0	85.61	proteasome 26S subunit, ATPase 4 [Source:HGNC Symb...	[more]
PSMC4	0.000e+0	85.61	proteasome 26S subunit, ATPase 4 [Source:HGNC Symb...	[more]
PSMC4	0.000e+0	87.74	proteasome 26S subunit, ATPase 4 [Source:HGNC Symb...	[more]
PSMC4	0.000e+0	87.74	proteasome 26S subunit, ATPase 4 [Source:HGNC Symb...	[more]
PSMC1	9.527e-127	50.53	proteasome 26S subunit, ATPase 1 [Source:HGNC Symb...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rpt-3	0.000e+0	82.80	Probable 26S proteasome regulatory subunit 6B [So...	[more]
rpt-3	0.000e+0	82.80	Probable 26S proteasome regulatory subunit 6B [So...	[more]
rpt-2	7.192e-120	49.17	Probable 26S proteasome regulatory subunit 4 [Sou...	[more]
rpt-6	1.450e-97	47.16	Proteasome Regulatory Particle, ATPase-like [Sour...	[more]
F56F11.4	1.817e-97	42.37	pep chromosome:WBcel235:III:2858558:2865497:1 gene...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rpt3	0.000e+0	89.09	gene:FBgn0028686 transcript:FBtr0346274	[more]
Rpt3	0.000e+0	89.09	gene:FBgn0028686 transcript:FBtr0073436	[more]
Rpt3R	0.000e+0	80.94	gene:FBgn0037742 transcript:FBtr0301536	[more]
Rpt3R	0.000e+0	80.94	gene:FBgn0037742 transcript:FBtr0332172	[more]
Rpt2	1.443e-126	51.76	gene:FBgn0015282 transcript:FBtr0084520	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc4	0.000e+0	85.61	proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:...	[more]
psmc4	0.000e+0	85.61	proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:...	[more]
psmc1a	5.861e-125	50.00	proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc...	[more]
psmc1b	1.678e-123	49.47	proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc...	[more]
psmc1a	3.905e-106	45.85	proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
kiaa1456l	0.000e+0	85.61	kiaa1456 like [Source:Xenbase;Acc:XB-GENE-985534]	[more]
kiaa1456l	0.000e+0	91.57	kiaa1456 like [Source:Xenbase;Acc:XB-GENE-985534]	[more]
psmc1	3.543e-127	50.53	proteasome 26S subunit, ATPase 1 [Source:NCBI gene...	[more]
psmc1	8.636e-127	50.53	proteasome 26S subunit, ATPase 1 [Source:NCBI gene...	[more]
cd248	4.225e-95	40.25	CD248 molecule [Source:Xenbase;Acc:XB-GENE-992999]	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Psmc4	0.000e+0	85.61	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]
Psmc4	0.000e+0	82.64	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]
Psmc1	6.540e-127	50.53	protease (prosome, macropain) 26S subunit, ATPase ...	[more]
Psmc3	1.918e-95	40.49	proteasome (prosome, macropain) 26S subunit, ATPas...	[more]
Psmc5	7.100e-94	47.20	protease (prosome, macropain) 26S subunit, ATPase ...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q63570\|PRS6B_RAT	0.000e+0	85.61	26S proteasome regulatory subunit 6B OS=Rattus nor...	[more]
sp\|P54775\|PRS6B_MOUSE	0.000e+0	85.61	26S proteasome regulatory subunit 6B OS=Mus muscul...	[more]
sp\|Q4R7L3\|PRS6B_MACFA	0.000e+0	85.61	26S proteasome regulatory subunit 6B OS=Macaca fas...	[more]
sp\|P43686\|PRS6B_HUMAN	0.000e+0	85.61	26S proteasome regulatory subunit 6B OS=Homo sapie...	[more]
sp\|Q3T030\|PRS6B_BOVIN	0.000e+0	85.61	26S proteasome regulatory subunit 6B OS=Bos taurus...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A183R534	0.000e+0	89.32	AAA domain-containing protein OS=Schistosoma rodha...	[more]
G4V9B5	0.000e+0	89.32	Putative 26s protease regulatory subunit 6b OS=Sch...	[more]
C1LMF2	0.000e+0	89.08	26S proteasome regulatory subunit 6B OS=Schistosom...	[more]
A0A5J4NQK0	0.000e+0	89.82	26S proteasome regulatory subunit T3 OS=Paragonimu...	[more]
A0A504YCY0	0.000e+0	87.87	Proteasome (Prosome macropain) 26S subunit ATPase ...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc4	0.000e+0	85.36	proteasome 26S subunit, ATPase 4 [Source:NCBI gene...	[more]
psmc1a	7.112e-126	50.26	26S proteasome regulatory subunit 4 [Source:NCBI g...	[more]
psmc1b	3.834e-125	50.00	26S proteasome regulatory subunit 4-like [Source:N...	[more]
psmc5	6.484e-94	47.20	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]
psmc3	4.552e-93	43.49	proteasome 26S subunit, ATPase 3 [Source:NCBI gene...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000006168.1	0.000e+0	90.91	pep scaffold:Pmarinus_7.0:GL486395:211235:217029:-...	[more]
ENSPMAT00000010299.1	3.725e-97	40.49	pep scaffold:Pmarinus_7.0:GL479893:343:6144:1 gene...	[more]
psmc5	7.162e-96	46.27	proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:...	[more]
ENSPMAT00000001244.1	1.562e-88	54.51	pep scaffold:Pmarinus_7.0:GL482260:6416:9764:-1 ge...	[more]
vcp	7.101e-52	39.56	valosin containing protein [Source:NCBI gene;Acc:3...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
RPT3	0.000e+0	70.91	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT2	6.493e-119	50.41	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT6	8.609e-93	43.25	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT5	5.095e-91	38.69	ATPase of the 19S regulatory particle of the 26S p...	[more]
RPT4	1.026e-84	42.25	ATPase of the 19S regulatory particle of the 26S p...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO43481	0.000e+0	87.34	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO26554	0.000e+0	89.30	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49524	5.944e-97	43.31	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37502	5.644e-93	39.66	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO34160	1.036e-91	43.85	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
psmc4	0.000e+0	84.84	proteasome 26S subunit, ATPase 4 [Source:NCBI gene...	[more]
psmc1a	6.546e-126	50.26	proteasome 26S subunit, ATPase 1 [Source:NCBI gene...	[more]
psmc3	2.445e-95	40.49	proteasome 26S subunit, ATPase 3 [Source:NCBI gene...	[more]
psmc5	2.145e-93	46.89	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]
psmc5	2.794e-93	46.89	proteasome 26S subunit, ATPase 5 [Source:NCBI gene...	[more]

BLAST of 26S proteasome regulatory subunit 6B vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000022591.1	0.000e+0	100.00	SMESG000022591.1	[more]
SMESG000065667.1	0.000e+0	69.39	SMESG000065667.1	[more]
SMESG000065715.1	0.000e+0	68.50	SMESG000065715.1	[more]
SMESG000065666.1	3.070e-163	69.16	SMESG000065666.1	[more]
SMESG000020306.1	1.315e-128	52.89	SMESG000020306.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30030650 ID=SMED30030650|Name=26S proteasome regulatory subunit 6B|organism=Schmidtea mediterranea sexual|type=transcript|length=1323bp
GTTACAGCCAAAATTACTATAAGCTATTTTAATTTTTGTTTAGTGTAATG
GAAGGCGTTATCCCTTTATTTAAAAGTGAACCAGAATTAGAAGTTCGAAC
TCCATATCTAAATTTTGGTCATATTGATCCGCTTCAATTAAGTGATGAAG
AATACTACGTTAAAATGAAGAAGTTAGAAAAACAGCTTCAATTCATTGAA
GTTCAAGAAGAATATATTAAAGATGAACAAAAGAATTTGAAAAAAGAATA
TCTACATGCTCAAGAAGAAGTGAAGCGTATTAAAAGTGTGCCTTTGGTTA
TAGGTCAGTTTCTTGAAGCTGTAGATGAAAACACTGGCATAGTAGGATCA
ACGACCGGTTCTAATTATTATGTAAGGATTTTATCTACTATCGACAAAGA
ACTATTGAAACCTAATGCAAGTGTTTCACTACATAAGCATAGTAATGCAT
TGGTCGATGTTTTACCTCCTGAAGCTGATTCCAGCATAACAATGTTACAA
GCTGACGAGAAACCCGATGTTACATATTCCATGATTGGTGGAATGGACAT
TCAAAAACAAGAAGTTCGAGAAGCAGTTGAATTGCCTTTAACTCATTTTG
AATTATATAAGCAAATTGGCATTGATCCTCCAAGAGGTGTTTTAATGTTC
GGTCCACCTGGTTGTGGTAAAACGATGTTGGCAAAAGCAGTTGCCCATCA
TACAACGGCTGCTTTTATTCGAGTTGTAGGGTCAGAATTTGTACAAAAGT
ATCTTGGCGAAGGCCCGCGAATGGTTCGAGATGTATTTAGATTAGCTAAA
GAAAATGCCCCTGCAATTATATTTATCGATGAAATAGACGCAATTGCGAC
AAAACGATTTGATGCACAAACGGGTGCGGATCGTGAAGTTCAGCGTATTT
TGTTGGAATTACTAAATCAAATGGATGGATTTGACCAAAATGTCAATGTA
AAAGTTATTATGGCAACCAATCGAGCAGATACTCTCGATCCAGCTTTATT
GCGACCAGGGCGATTGGATAGAAAAATTGAATTTCCACTTCCAGATCGTA
GACAAAAACGATTGATTTTCTCTACTGTTACGTCCAAAATGAACCTAGCC
GATGACGTAGATCTAGAAGAACTGGTAGCTAGACCTGATAAAATTTCTGG
TGCTGACATTAATTCGATCTGTCAAGAAGCTGGTATGCAAGCCGTGCGAG
AAAATCGCTACGTTGTTCTCGCTAAGGATTTTGAGAAAGGATATAAGACC
ACTGTGAAGAAGGATGATCATGAACTTGACTTTTACAAATAAATTTATTC
TGTATTTTATTAATGGTTATAAA

protein sequence of SMED30030650-orf-1

>SMED30030650-orf-1 ID=SMED30030650-orf-1|Name=SMED30030650-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=415bp
MEGVIPLFKSEPELEVRTPYLNFGHIDPLQLSDEEYYVKMKKLEKQLQFI
EVQEEYIKDEQKNLKKEYLHAQEEVKRIKSVPLVIGQFLEAVDENTGIVG
STTGSNYYVRILSTIDKELLKPNASVSLHKHSNALVDVLPPEADSSITML
QADEKPDVTYSMIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLM
FGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA
KENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVN
VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTVTSKMNL
ADDVDLEELVARPDKISGADINSICQEAGMQAVRENRYVVLAKDFEKGYK
TTVKKDDHELDFYK*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000429	neoblast
PLANA:0002089	reproductive organ
PLANA:0003116	parenchymal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR032501	Prot_ATP_ID_OB
IPR041569	AAA_lid_3
IPR005937	26S_Psome_P45-like
IPR035256	PSMC4
IPR003593	AAA+_ATPase
IPR003959	ATPase_AAA_core
IPR027417	P-loop_NTPase
IPR003960	ATPase_AAA_CS

Vocabulary: **molecular function**
Term	Definition
GO:0005524	ATP binding
GO:0000166	nucleotide binding
GO:0016787	hydrolase activity
GO:0016887	ATPase activity
GO:0017025	TBP-class protein binding
GO:0036402	proteasome-activating ATPase activity

Vocabulary: **cellular component**
Term	Definition
GO:0000502	proteasome complex
GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0008540	proteasome regulatory particle, base subcomplex
GO:0016020	membrane
GO:0016234	inclusion body
GO:0022624	proteasome accessory complex
GO:0031595	nuclear proteasome complex
GO:0031597	cytosolic proteasome complex
GO:0045202	synapse

Vocabulary: **biological process**
Term	Definition
GO:0001824	blastocyst development
GO:0030163	protein catabolic process
GO:0030433	ubiquitin-dependent ERAD pathway
GO:0045899	positive regulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:1901800	positive regulation of proteasomal protein catabolic process

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..81
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 39..150 e-value: 2.2E-30 score: 106.7
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 151..331 e-value: 4.1E-67 score: 227.5
None	No IPR available	GENE3D	G3DSA:1.10.8.60		coord: 335..414 e-value: 1.3E-23 score: 84.6
None	No IPR available	PANTHER	PTHR23073	26S PROTEASE REGULATORY SUBUNIT	coord: 31..410
None	No IPR available	CDD	cd00009	AAA	coord: 164..331 e-value: 1.75865E-27 score: 104.535
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 194..333 e-value: 1.8E-23 score: 94.0
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 85..140 e-value: 7.2E-9 score: 35.5
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 198..331 e-value: 2.4E-43 score: 147.7
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 353..397 e-value: 4.8E-11 score: 42.3
IPR005937	26S proteasome regulatory subunit P45-like	TIGRFAM	TIGR01242	TIGR01242	coord: 41..398 e-value: 9.7E-137 score: 453.9
IPR035256	26S Proteasome regulatory subunit 6B	PANTHER	PTHR23073:SF8	26S PROTEASOME REGULATORY SUBUNIT 6B	coord: 31..410
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 301..319
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 156..401