Dynein light chain

Overview
NameDynein light chain
Smed IDSMED30030542
Length (bp)580
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Dynein light chain (SMED30030542) t-SNE clustered cells

Violin plots show distribution of expression levels for Dynein light chain (SMED30030542) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Dynein light chain (SMED30030542) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Dynein light chain (SMED30030542) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30030542

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
intestinal phagocyteSMED30030542 Contig2357GPL15192PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
pharynxSMED30030542 dd_Smed_v4_310_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30030542 dd_Smed_v4_310_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30030542 dd_Smed_v4_310_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30030542 dd_Smed_v4_310_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30030542 dd_Smed_v4_310_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30030542 dd_Smed_v4_310_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30030542 OX_Smed_1.0.09081ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL2 (dynein light chain LC8-type 2 [Source:HGNC Symbol;Acc:HGNC:24596])

HSP 1 Score: 177.563 bits (449), Expect = 1.145e-57
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 171.4 bits (433), Expect = 3.494e-55
Identity = 77/86 (89.53%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+++MQQ+++ECATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 171.4 bits (433), Expect = 3.494e-55
Identity = 77/86 (89.53%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+++MQQ+++ECATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 171.4 bits (433), Expect = 3.494e-55
Identity = 77/86 (89.53%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+++MQQ+++ECATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 171.4 bits (433), Expect = 3.494e-55
Identity = 77/86 (89.53%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+++MQQ+++ECATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-1 (Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799])

HSP 1 Score: 177.178 bits (448), Expect = 6.997e-58
Identity = 81/86 (94.19%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+DDMQQ+AI+CATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-1 (Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799])

HSP 1 Score: 177.178 bits (448), Expect = 6.997e-58
Identity = 81/86 (94.19%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+DDMQQ+AI+CATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-1 (Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799])

HSP 1 Score: 177.178 bits (448), Expect = 6.997e-58
Identity = 81/86 (94.19%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+DDMQQ+AI+CATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-5 (Dynein Light Chain [Source:UniProtKB/TrEMBL;Acc:Q65XS9])

HSP 1 Score: 88.9669 bits (219), Expect = 3.136e-22
Identity = 36/84 (42.86%), Postives = 58/84 (69.05%), Query Frame = 2 
Query:  254 AVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            A ++++ M   M+QEA   A +++  +++E DIA ++K  FD++Y P WHCI G++FGS+VT E   FIYF +G +A +LFK+ 
Sbjct:   58 ADVQHSRMPRHMEQEACSLAAKSIMTYHLEHDIARHLKMAFDREYGPDWHCICGKHFGSFVTFEPDSFIYFRIGTIAFMLFKTS 141
[Close]
BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-2 (Probable dynein light chain 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q21557])

HSP 1 Score: 79.7221 bits (195), Expect = 9.818e-20
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S  K  +K  DM D  +   I    +A   +NI+KD+AA++K+E DKK+  TWH I G+ FGS V++E  HFI     +V ++++K G
Sbjct:    2 SEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGATWHVICGKCFGSRVSYEMGHFILLKCNKVNVMIYKCG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0070706)

HSP 1 Score: 174.096 bits (440), Expect = 1.295e-56
Identity = 78/88 (88.64%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+++MQQ+A++CATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0070704)

HSP 1 Score: 174.096 bits (440), Expect = 1.295e-56
Identity = 78/88 (88.64%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+++MQQ+A++CATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0307065)

HSP 1 Score: 174.096 bits (440), Expect = 1.295e-56
Identity = 78/88 (88.64%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+++MQQ+A++CATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0070707)

HSP 1 Score: 174.096 bits (440), Expect = 1.295e-56
Identity = 78/88 (88.64%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+++MQQ+A++CATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0474174)

HSP 1 Score: 179.104 bits (453), Expect = 3.347e-56
Identity = 78/88 (88.64%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+++MQQ+A++CATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll2a (dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11])

HSP 1 Score: 176.792 bits (447), Expect = 1.483e-57
Identity = 80/88 (90.91%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            + RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 TDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll2b (dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:ZDB-GENE-050320-132])

HSP 1 Score: 176.792 bits (447), Expect = 1.483e-57
Identity = 80/88 (90.91%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            + RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 TDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll2a (dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11])

HSP 1 Score: 176.792 bits (447), Expect = 1.483e-57
Identity = 80/88 (90.91%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            + RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 TDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll1 (dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961])

HSP 1 Score: 176.407 bits (446), Expect = 2.082e-57
Identity = 80/88 (90.91%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+++MQQ+A+ECATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVECATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll1 (dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961])

HSP 1 Score: 176.407 bits (446), Expect = 2.082e-57
Identity = 80/88 (90.91%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+++MQQ+A+ECATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVECATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Xenopus
Match: dynll2 (dynein light chain LC8-type 2 [Source:NCBI gene;Acc:100038056])

HSP 1 Score: 177.563 bits (449), Expect = 1.038e-57
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Xenopus
Match: dynll1 (dynein light chain LC8-type 1 [Source:NCBI gene;Acc:448652])

HSP 1 Score: 174.866 bits (442), Expect = 1.314e-56
Identity = 79/88 (89.77%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+++MQQ+A++CATQA+EKFNIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SERKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Xenopus
Match: ENSXETT00000015639.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:2:48978690:48979872:1 gene:ENSXETG00000009974.1 transcript:ENSXETT00000015639.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 76.2554 bits (186), Expect = 1.098e-17
Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = -1 
Query:  233 TRFEQQYCHLSQIEINEVLGFMSDIAAEIPSNNAVPCRIVFLVEFFFNISCDVLFNIELLHGLSSAFDSFLLHIVGHVSIFDNSLSRTVRH 505
             RF+++ C+L+QI+++EVL FM  IAA++ +N+AVP        +  +I  +V  NI LLH L    +S LLH+  HVSI DNSLS  VRH
Sbjct:    4 ARFKEENCNLAQIKVDEVLCFMCYIAAKVSANDAVPI-------YLLDIGSNVFLNIILLHCLCGTVNSILLHVFRHVSILDNSLS--VRH 85
[Close]
BLAST of Dynein light chain vs. Ensembl Xenopus
Match: rnf181 (ring finger protein 181 [Source:Xenbase;Acc:XB-GENE-964051])

HSP 1 Score: 66.6254 bits (161), Expect = 4.088e-14
Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 2 
Query:  254 AVIKNADMADDMQQEAIECATQAMEKFNIEKDIAA-YIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIY-FYLGQVAILLFK 499
             +I++ DM ++M+ E +E    A EKF    + AA  IK+  DKK+  +WH ++G  FG  +THE K+ +Y F+ G +AI ++K
Sbjct:   21 PLIRHTDMPEEMRVETMELCVTACEKFASNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYMFFGGSLAICVWK 104
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll2 (dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347])

HSP 1 Score: 177.563 bits (449), Expect = 7.863e-58
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll2 (dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347])

HSP 1 Score: 177.563 bits (449), Expect = 7.863e-58
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll2 (dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347])

HSP 1 Score: 177.563 bits (449), Expect = 7.863e-58
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll1 (dynein light chain LC8-type 1 [Source:MGI Symbol;Acc:MGI:1861457])

HSP 1 Score: 171.4 bits (433), Expect = 2.399e-55
Identity = 77/86 (89.53%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+++MQQ+++ECATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll1 (dynein light chain LC8-type 1 [Source:MGI Symbol;Acc:MGI:1861457])

HSP 1 Score: 171.4 bits (433), Expect = 2.399e-55
Identity = 77/86 (89.53%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+++MQQ+++ECATQA+EK+NIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q78P75|DYL2_RAT (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.500e-57
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q9D0M5|DYL2_MOUSE (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.500e-57
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q96FJ2|DYL2_HUMAN (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.500e-57
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q3MHR3|DYL2_BOVIN (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.500e-57
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q22799|DYL1_CAEEL (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.900e-57
Identity = 81/86 (94.19%), Postives = 86/86 (100.00%), Query Frame = 2 
Query:  248 RKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            RKAVIKNADM+DDMQQ+AI+CATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 RKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: W5MFS0 (Dynein light chain OS=Lepisosteus oculatus OX=7918 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.866e-57
Identity = 87/114 (76.32%), Postives = 99/114 (86.84%), Query Frame = 2 
Query:  167 ILNAYNRLITHIVILFLISKL-KMSDSSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            +LN  N+L +  +  F    L + + S RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:   15 VLNPCNKLCSRALFYFFAPSLCRDAMSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 128
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: A0A2P4T106 (Dynein light chain OS=Bambusicola thoracicus OX=9083 GN=CIB84_006215 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 5.168e-56
Identity = 84/97 (86.60%), Postives = 93/97 (95.88%), Query Frame = 2 
Query:  215 LISKLKMSDSSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            L+++  MSD  RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:   32 LLARFTMSD--RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 126
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: A0A1I8JPP2 (Dynein light chain OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig022175g1 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.117e-55
Identity = 83/88 (94.32%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+D+MQQ+A+ECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SERKAVIKNADMSDEMQQDAVECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: H2UYP9 (Dynein light chain OS=Takifugu rubripes OX=31033 GN=LOC101063755 PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 1.529e-55
Identity = 84/101 (83.17%), Postives = 93/101 (92.08%), Query Frame = 2 
Query:  203 VILFLISKLKMSDSSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            ++  L  +  MS+  RKAVIKNADM++DMQQ+A+ECATQA+EKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    5 LVSLLFPRATMSE--RKAVIKNADMSEDMQQDAVECATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 103
[Close]
BLAST of Dynein light chain vs. TrEMBL
Match: A0A3M0KU58 (Dynein light chain OS=Hirundo rustica rustica OX=333673 GN=DUI87_12318 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.802e-55
Identity = 84/97 (86.60%), Postives = 92/97 (94.85%), Query Frame = 2 
Query:  215 LISKLKMSDSSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            L+ +  MSD  RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    9 LVFRFTMSD--RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 103
[Close]
BLAST of Dynein light chain vs. Ensembl Cavefish
Match: ENSAMXT00000047143.1 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:103041528])

HSP 1 Score: 176.792 bits (447), Expect = 1.257e-57
Identity = 80/88 (90.91%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            + RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 TDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Cavefish
Match: dynll2b (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:103041528])

HSP 1 Score: 176.792 bits (447), Expect = 1.257e-57
Identity = 80/88 (90.91%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            + RKAVIKNADM++DMQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 TDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Cavefish
Match: dynll1 (dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961])

HSP 1 Score: 158.303 bits (399), Expect = 6.673e-50
Identity = 71/79 (89.87%), Postives = 78/79 (98.73%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQ 478
            S RKAVIKNADM+++MQQ+A+ECATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQ
Sbjct:    2 SDRKAVIKNADMSEEMQQDAVECATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQ 80
[Close]
BLAST of Dynein light chain vs. Ensembl Cavefish
Match: ENSAMXT00000013314.2 (pep primary_assembly:Astyanax_mexicanus-2.0:1:23335261:23337700:1 gene:ENSAMXG00000012944.2 transcript:ENSAMXT00000013314.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 91.6633 bits (226), Expect = 3.589e-24
Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -1 
Query:  248 TRFEQQYCHLSQIEINEVLGFMSDIAAEIPSNNAVPCRIVFLVEFFFNISCDVLFNIELLHGLSSAFDSFLLHIVGHVSIFDNSLS 505
             RFEQ+Y HL+Q+E++EVL  + D+ AE+P++NAVP  +V L  + F++ CDVL  + LLH L    D  LLH++ HVS+ D+S S
Sbjct:    4 ARFEQEYGHLAQVEVDEVLRLVGDVTAEVPAHNAVPSWVVLL-AYLFDVRCDVLLYVVLLHCLCCTVDCVLLHVLRHVSVLDHSFS 88
[Close]
BLAST of Dynein light chain vs. Ensembl Cavefish
Match: ENSAMXT00000025088.2 (pep primary_assembly:Astyanax_mexicanus-2.0:6:35277932:35282302:-1 gene:ENSAMXG00000024374.2 transcript:ENSAMXT00000025088.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 89.7373 bits (221), Expect = 3.570e-23
Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = -1 
Query:  233 TRFEQQYCHLSQIEINEVLGFMSDIAAEIPSNNAVPCRIVFLVEF---FFNISCDVLFNIELLHGLSSAFDSFLLHIVGHVSIFDNSLSRTVRH 505
            TR  +Q CHL+Q+E++EVLG + D+AAE+P+++AVP  +V LV+     F++  DVL ++  L  LS  F+S LLH++ HV IFD+ L   VRH
Sbjct:    4 TRILKQNCHLAQVEVDEVLGLVGDVAAEVPAHDAVPGGVVLLVKLLTHLFDVGSDVLLDVVFLQSLSGTFNSILLHLLRHVRIFDHCLP--VRH 95
[Close]
BLAST of Dynein light chain vs. Ensembl Yeast
Match: DYN2 (Cytoplasmic light chain dynein, microtubule motor protein; required for intracellular transport and cell division; involved in mitotic spindle positioning; forms complex with dynein intermediate chain Pac11p that promotes Dyn1p homodimerization, potentiates motor processivity; Dyn2p-Pac11p complex important for interaction of dynein motor complex with dynactin complex; acts as molecular glue to dimerize, stabilize Nup82-Nsp1-Nup159 complex module of cytoplasmic pore filaments [Source:SGD;Acc:S000002832])

HSP 1 Score: 103.605 bits (257), Expect = 1.226e-29
Identity = 42/91 (46.15%), Postives = 67/91 (73.63%), Query Frame = 2 
Query:  233 MSDSSRKA-VIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 502
            MSD ++   ++K +D+ D ++++ +  +  A++K+ +E+DIA  +KK+ D KY  TWH IVG+NFGSYVTHE  HF+YFY+G +A L+FK+
Sbjct:    1 MSDENKSTPIVKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYVTHEKGHFVYFYIGPLAFLVFKT 91
[Close]
BLAST of Dynein light chain vs. Ensembl Nematostella
Match: EDO44582 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RVI5])

HSP 1 Score: 177.178 bits (448), Expect = 3.379e-58
Identity = 82/88 (93.18%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADMA+DMQ +AIECATQA+EKFNIEKDIAA+IKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SERKAVIKNADMAEDMQTDAIECATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Nematostella
Match: EDO38557 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCP2])

HSP 1 Score: 70.0922 bits (170), Expect = 3.971e-16
Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 2 
Query:  257 VIKNADMADDMQQEAIECATQAMEKFNIEKDIAA-YIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIY-FYLGQVAILLFK 499
            +I+ +DM D+M+ EA+E    A EKF+   + AA  IK+  DKK+  +WH +VG  FG  +THE ++ +Y F+ G  AI ++K
Sbjct:   26 LIRYSDMNDEMRTEAMELCVTACEKFSNNNETAAKMIKESMDKKFGASWHAVVGEGFGFEITHEVRNLLYMFFGGTTAICIWK 108
[Close]
BLAST of Dynein light chain vs. Ensembl Medaka
Match: dynll1 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:101171417])

HSP 1 Score: 177.948 bits (450), Expect = 4.771e-58
Identity = 81/88 (92.05%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM++DMQQ+A+ECATQA+EK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDRKAVIKNADMSEDMQQDAVECATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Medaka
Match: ENSORLT00000005747.2 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:101162462])

HSP 1 Score: 174.866 bits (442), Expect = 6.377e-57
Identity = 79/88 (89.77%), Postives = 87/88 (98.86%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            + RKAVIKNADM+++MQQ+A++CATQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 TDRKAVIKNADMSEEMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Medaka
Match: DYNLL2 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:101174042])

HSP 1 Score: 173.326 bits (438), Expect = 3.149e-56
Identity = 78/88 (88.64%), Postives = 86/88 (97.73%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S +KAVIKNADM+D+MQQ+A++CA QAMEK+NIEKDIAAY+KKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SDKKAVIKNADMSDEMQQDAVDCAMQAMEKYNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Ensembl Medaka
Match: ENSORLT00000028916.1 (pep primary_assembly:ASM223467v1:9:6243543:6247014:-1 gene:ENSORLG00000022487.1 transcript:ENSORLT00000028916.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 92.0485 bits (227), Expect = 2.465e-24
Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = -1 
Query:  233 TRFEQQYCHLSQIEINEVLGFMSDIAAEIPSNNAVPCRIVFLVEFFFNISCDVLFNIELLHGLSSAFDSFLLHIVGHVSIFDNSLSRTVRH 505
            +R EQQ  HL+Q+E+NE+LG +S +AAE+P NNAVP R+VFLVE       DV  ++ LL GL       LLH++ HV IFD+ LS  VRH
Sbjct:    4 SRLEQQNGHLTQVEVNEMLGLVSHVAAEVPPNNAVPSRVVFLVELL-----DVFLDVVLLQGLCGTLHGVLLHVLRHVGIFDHCLS--VRH 87
[Close]
BLAST of Dynein light chain vs. Ensembl Medaka
Match: ENSORLT00000006686.2 (pep primary_assembly:ASM223467v1:14:12601680:12602092:1 gene:ENSORLG00000005302.2 transcript:ENSORLT00000006686.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 81.6481 bits (200), Expect = 4.671e-20
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = -1 
Query:  251 FEQQYCHLSQIEINEVLGFMSDIAAEIPSNNAVPCRIVFLVEF-----FFNISCDVLFNIELLHGLSSAFDSFLLHIVGHVSIFDNSL 499
             +QQ  HL+Q+E++E+L  +  IA ++P NNAVPCR+VFLV+F       +I  ++  +I LLHGL       LLH + HV IFD+ L
Sbjct:   21 LKQQNSHLTQVEVDEMLRLVGHIATKVPPNNAVPCRVVFLVKFLDPTYLLDICSNIFLDIVLLHGLHGTVHCILLHFIRHVCIFDHRL 108
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000003543.1 (SMESG000003543.1)

HSP 1 Score: 193.356 bits (490), Expect = 3.124e-64
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 2 
Query:  233 MSDSSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            MSDSSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDSSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 91
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000043518.1 (SMESG000043518.1)

HSP 1 Score: 183.726 bits (465), Expect = 1.594e-60
Identity = 84/91 (92.31%), Postives = 89/91 (97.80%), Query Frame = 2 
Query:  233 MSDSSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            M+D  RKAVIKNADM++DMQQ+A+ECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MADGGRKAVIKNADMSEDMQQDAVECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 91
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000017229.1 (SMESG000017229.1)

HSP 1 Score: 172.94 bits (437), Expect = 2.802e-56
Identity = 79/88 (89.77%), Postives = 84/88 (95.45%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S RKAVIKNADM+DDMQQEAI+ A QAMEK+N+EKDIAAYIKKEFDKKYNPTWH IVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    2 SERKAVIKNADMSDDMQQEAIDVALQAMEKYNVEKDIAAYIKKEFDKKYNPTWHAIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000005286.1 (SMESG000005286.1)

HSP 1 Score: 167.933 bits (424), Expect = 2.708e-54
Identity = 78/88 (88.64%), Postives = 82/88 (93.18%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S R+AVIKNADM D+MQ+ AI  ATQAMEKFNIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
[Close]
BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000073811.1 (SMESG000073811.1)

HSP 1 Score: 166.777 bits (421), Expect = 8.441e-54
Identity = 76/88 (86.36%), Postives = 82/88 (93.18%), Query Frame = 2 
Query:  242 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 505
            S R+AVIKNADM +DMQ+ A+ CAT AMEK+NIEKDIAA+IKKEFDK YNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    2 SERQAVIKNADMQEDMQEAAVNCATTAMEKYNIEKDIAAFIKKEFDKLYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
The following BLAST results are available for this feature:
BLAST of Dynein light chain vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
DYNLL21.145e-5792.05dynein light chain LC8-type 2 [Source:HGNC Symbol;... [more]
DYNLL13.494e-5589.53dynein light chain LC8-type 1 [Source:HGNC Symbol;... [more]
DYNLL13.494e-5589.53dynein light chain LC8-type 1 [Source:HGNC Symbol;... [more]
DYNLL13.494e-5589.53dynein light chain LC8-type 1 [Source:HGNC Symbol;... [more]
DYNLL13.494e-5589.53dynein light chain LC8-type 1 [Source:HGNC Symbol;... [more]
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BLAST of Dynein light chain vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dlc-16.997e-5894.19Dynein light chain 1, cytoplasmic [Source:UniProt... [more]
dlc-16.997e-5894.19Dynein light chain 1, cytoplasmic [Source:UniProt... [more]
dlc-16.997e-5894.19Dynein light chain 1, cytoplasmic [Source:UniProt... [more]
dlc-53.136e-2242.86Dynein Light Chain [Source:UniProtKB/TrEMBL;Acc:Q... [more]
dlc-29.818e-2039.77Probable dynein light chain 2, cytoplasmic [Sourc... [more]
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BLAST of Dynein light chain vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ctp1.295e-5688.64gene:FBgn0011760 transcript:FBtr0070706[more]
ctp1.295e-5688.64gene:FBgn0011760 transcript:FBtr0070704[more]
ctp1.295e-5688.64gene:FBgn0011760 transcript:FBtr0307065[more]
ctp1.295e-5688.64gene:FBgn0011760 transcript:FBtr0070707[more]
ctp3.347e-5688.64gene:FBgn0011760 transcript:FBtr0474174[more]
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BLAST of Dynein light chain vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dynll2a1.483e-5790.91dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:... [more]
dynll2b1.483e-5790.91dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:... [more]
dynll2a1.483e-5790.91dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:... [more]
dynll12.082e-5790.91dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:Z... [more]
dynll12.082e-5790.91dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:Z... [more]
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BLAST of Dynein light chain vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4
Match NameE-valueIdentityDescription
dynll21.038e-5792.05dynein light chain LC8-type 2 [Source:NCBI gene;Ac... [more]
dynll11.314e-5689.77dynein light chain LC8-type 1 [Source:NCBI gene;Ac... [more]
ENSXETT00000015639.11.098e-1746.15pep primary_assembly:Xenopus_tropicalis_v9.1:2:489... [more]
rnf1814.088e-1438.10ring finger protein 181 [Source:Xenbase;Acc:XB-GEN... [more]
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BLAST of Dynein light chain vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Dynll27.863e-5892.05dynein light chain LC8-type 2 [Source:MGI Symbol;A... [more]
Dynll27.863e-5892.05dynein light chain LC8-type 2 [Source:MGI Symbol;A... [more]
Dynll27.863e-5892.05dynein light chain LC8-type 2 [Source:MGI Symbol;A... [more]
Dynll12.399e-5589.53dynein light chain LC8-type 1 [Source:MGI Symbol;A... [more]
Dynll12.399e-5589.53dynein light chain LC8-type 1 [Source:MGI Symbol;A... [more]
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BLAST of Dynein light chain vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q78P75|DYL2_RAT5.500e-5792.05Dynein light chain 2, cytoplasmic OS=Rattus norveg... [more]
sp|Q9D0M5|DYL2_MOUSE5.500e-5792.05Dynein light chain 2, cytoplasmic OS=Mus musculus ... [more]
sp|Q96FJ2|DYL2_HUMAN5.500e-5792.05Dynein light chain 2, cytoplasmic OS=Homo sapiens ... [more]
sp|Q3MHR3|DYL2_BOVIN5.500e-5792.05Dynein light chain 2, cytoplasmic OS=Bos taurus OX... [more]
sp|Q22799|DYL1_CAEEL8.900e-5794.19Dynein light chain 1, cytoplasmic OS=Caenorhabditi... [more]
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BLAST of Dynein light chain vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
W5MFS03.866e-5776.32Dynein light chain OS=Lepisosteus oculatus OX=7918... [more]
A0A2P4T1065.168e-5686.60Dynein light chain OS=Bambusicola thoracicus OX=90... [more]
A0A1I8JPP21.117e-5594.32Dynein light chain OS=Macrostomum lignano OX=28230... [more]
H2UYP91.529e-5583.17Dynein light chain OS=Takifugu rubripes OX=31033 G... [more]
A0A3M0KU581.802e-5586.60Dynein light chain OS=Hirundo rustica rustica OX=3... [more]
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BLAST of Dynein light chain vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000047143.11.257e-5790.91dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
dynll2b1.257e-5790.91dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
dynll16.673e-5089.87dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:Z... [more]
ENSAMXT00000013314.23.589e-2447.67pep primary_assembly:Astyanax_mexicanus-2.0:1:2333... [more]
ENSAMXT00000025088.23.570e-2346.81pep primary_assembly:Astyanax_mexicanus-2.0:6:3527... [more]
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BLAST of Dynein light chain vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dynein light chain vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
DYN21.226e-2946.15Cytoplasmic light chain dynein, microtubule motor ... [more]
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BLAST of Dynein light chain vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO445823.379e-5893.18Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO385573.971e-1640.96Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Dynein light chain vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dynll14.771e-5892.05dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
ENSORLT00000005747.26.377e-5789.77dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
DYNLL23.149e-5688.64dynein light chain 2, cytoplasmic [Source:NCBI gen... [more]
ENSORLT00000028916.12.465e-2451.65pep primary_assembly:ASM223467v1:9:6243543:6247014... [more]
ENSORLT00000006686.24.671e-2044.32pep primary_assembly:ASM223467v1:14:12601680:12602... [more]
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BLAST of Dynein light chain vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000003543.13.124e-64100.00SMESG000003543.1[more]
SMESG000043518.11.594e-6092.31SMESG000043518.1[more]
SMESG000017229.12.802e-5689.77SMESG000017229.1[more]
SMESG000005286.12.708e-5488.64SMESG000005286.1[more]
SMESG000073811.18.441e-5486.36SMESG000073811.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30030542 ID=SMED30030542|Name=Dynein light chain|organism=Schmidtea mediterranea sexual|type=transcript|length=580bp
AAAAAACCGATTGACAAAAAATCTGTATTTATAGATGGCATACTCGTATT
AATTGTACAAAGAATAAAAACCAACTAATGAAATGATTACATAAGACACA
GCTGAAAACTATGCTACTAAACCAACCAATAGAAATTCAGCATAGCCACT
ATTCTACTAAAACCAAATCCTCAATGCATATAATAGACTAATCACACATA
TTGTCATTTTATTTTTAATATCTAAATTAAAAATGTCTGACAGTTCGAGA
AAGGCTGTTATCAAAAATGCTGACATGGCCGACGATATGCAGCAAGAAGC
TATCGAATGCGCTACTCAAGCCATGGAGAAGTTCAATATTGAAAAGGACA
TCGCAGCTTATATTAAAAAAGAATTCGACAAGAAATACAATCCTACATGG
CACTGCATTGTTGGACGGAATTTCGGCAGCTATGTCACTCATGAAACCAA
GCACTTCATTTATTTCTATTTGGGACAAGTGGCAATATTGTTGTTCAAAT
CTGGTTGAAATAAATAATTGAGATATAAAAAAAAAAAAAAAAAAAAAAAA
AAGTAAACTACTAGACGTTAGAATACCACT
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000070intestinal phagocyte
PLANA:0000418head
PLANA:0000429neoblast
Vocabulary: INTERPRO
TermDefinition
IPR037177DLC_sf
IPR001372Dynein_light_chain_typ-1/2
IPR019763Dynein_light_1/2_CS
Vocabulary: cellular component
TermDefinition
GO:0030286dynein complex
GO:0005875microtubule associated complex
GO:0005634nucleus
GO:0005737cytoplasm
GO:0005813centrosome
GO:0005856cytoskeleton
GO:0005868cytoplasmic dynein complex
GO:0005874microtubule
GO:0016020membrane
GO:0016459myosin complex
Vocabulary: biological process
TermDefinition
GO:0007017microtubule-based process
GO:0006810transport
GO:0008039synaptic target recognition
Vocabulary: molecular function
TermDefinition
GO:0003774motor activity
GO:0005515protein binding
GO:0008092cytoskeletal protein binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 3..90
e-value: 5.2E-61
score: 218.7
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 7..90
e-value: 1.2E-43
score: 147.3
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 4..91
IPR037177Dynein light chain superfamilyGENE3DG3DSA:3.30.740.10coord: 3..91
e-value: 1.1E-48
score: 165.2
IPR037177Dynein light chain superfamilySUPERFAMILYSSF54648DLCcoord: 5..91
NoneNo IPR availablePANTHERPTHR11886:SF62DYNEIN LIGHT CHAINcoord: 4..91
IPR019763Dynein light chain, type 1/2, conserved sitePROSITEPS01239DYNEIN_LIGHT_1coord: 57..71