SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30030460 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Human
Match: SMARCD1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:HGNC Symbol;Acc:HGNC:11106]) HSP 1 Score: 466.848 bits (1200), Expect = 3.058e-158 Identity = 248/467 (53.10%), Postives = 322/467 (68.95%), Query Frame = 3
Query: 618 PTPGRNIPSRMPHPNPTLNNNRRVSNIPSA--NLSQSG----------------------NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGE---IKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
P PG SRM P++ N PS L+QSG NRN +K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + + + A+ WELRVEGRL +++ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR + TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER+++ CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K +REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 59 PRPGMLPGSRMTPQGPSMGPPGYGGN-PSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVAS-----------WELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGI 512
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Human
Match: SMARCD2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]) HSP 1 Score: 440.654 bits (1132), Expect = 3.403e-148 Identity = 228/437 (52.17%), Postives = 298/437 (68.19%), Query Frame = 3
Query: 627 GRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G P R P ++ R+ +P A R +KR RKM D++LP+ +R+L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S TF+P + G+ WELRVEG+L D+ + K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NVKC L LML+ +P QYKL+P LAR+LG+HT TRA I+ ALW YIK +LQD HER+YINC++Y QIF R++F+EIP +L LL PDPI+INHVI VD + K+ +CYDIDVEVDD K + N+ + + QEI +LD KIH+ ++ INQ K +R+F L +S DPQ FI WL SQ RDLK++ DV G+PEEER++ F+ PW QEAV R+ + K+ QRRQELE L +
Sbjct: 61 GAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR-RKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVI-GNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGI 491
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Human
Match: SMARCD2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]) HSP 1 Score: 438.728 bits (1127), Expect = 4.609e-148 Identity = 228/437 (52.17%), Postives = 298/437 (68.19%), Query Frame = 3
Query: 627 GRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G P R P ++ R+ +P A R +KR RKM D++LP+ +R+L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S TF+P + G+ WELRVEG+L D+ + K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NVKC L LML+ +P QYKL+P LAR+LG+HT TRA I+ ALW YIK +LQD HER+YINC++Y QIF R++F+EIP +L LL PDPI+INHVI VD + K+ +CYDIDVEVDD K + N+ + + QEI +LD KIH+ ++ INQ K +R+F L +S DPQ FI WL SQ RDLK++ DV G+PEEER++ F+ PW QEAV R+ + K+ QRRQELE L +
Sbjct: 23 GAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR-RKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVI-GNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGI 453
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Human
Match: SMARCD2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]) HSP 1 Score: 439.113 bits (1128), Expect = 8.569e-148 Identity = 228/437 (52.17%), Postives = 298/437 (68.19%), Query Frame = 3
Query: 627 GRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G P R P ++ R+ +P A R +KR RKM D++LP+ +R+L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S TF+P + G+ WELRVEG+L D+ + K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NVKC L LML+ +P QYKL+P LAR+LG+HT TRA I+ ALW YIK +LQD HER+YINC++Y QIF R++F+EIP +L LL PDPI+INHVI VD + K+ +CYDIDVEVDD K + N+ + + QEI +LD KIH+ ++ INQ K +R+F L +S DPQ FI WL SQ RDLK++ DV G+PEEER++ F+ PW QEAV R+ + K+ QRRQELE L +
Sbjct: 50 GAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR-RKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVI-GNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGI 480
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Human
Match: SMARCD2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]) HSP 1 Score: 440.269 bits (1131), Expect = 1.512e-147 Identity = 228/437 (52.17%), Postives = 298/437 (68.19%), Query Frame = 3
Query: 627 GRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G P R P ++ R+ +P A R +KR RKM D++LP+ +R+L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S TF+P + G+ WELRVEG+L D+ + K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NVKC L LML+ +P QYKL+P LAR+LG+HT TRA I+ ALW YIK +LQD HER+YINC++Y QIF R++F+EIP +L LL PDPI+INHVI VD + K+ +CYDIDVEVDD K + N+ + + QEI +LD KIH+ ++ INQ K +R+F L +S DPQ FI WL SQ RDLK++ DV G+PEEER++ F+ PW QEAV R+ + K+ QRRQELE L +
Sbjct: 98 GAAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR-RKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVI-GNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGI 528
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Celegans
Match: ham-3 (pep chromosome:WBcel235:III:10120781:10122928:1 gene:WBGene00044072.1 transcript:ZK1128.5.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ham-3) HSP 1 Score: 376.326 bits (965), Expect = 2.436e-124 Identity = 215/443 (48.53%), Postives = 286/443 (64.56%), Query Frame = 3
Query: 645 RMPHPNPTLNNNRRVSN--IPSANLSQSGNRNS--IKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKA------KRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQV--DGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
R HP T RR N +P GNR K+K++ D+L+ VR+L+PES+AYM +L E+ LD + R+++ +QE +KRP KIKK+LR+ +S TF G P + ++A+ P WELRVEGRL D+ + A KRKFSS+FKSLVIELDKD+YGPDNHLVEWHR T ETDGFQVKRPG+ VKC + L+L+ +P ++KL P LA+VLGI +TR +II ALW YIKT +LQDP +RD IN D +LEQ F +++F EIP RL LL PDP+++NH+IQ DG++ K +CYDIDVE++D K + N+ N + +I LD KI DLVDQIN+ KLRR+FFL +SN+P FI +W+ SQ DLK + + S G E +R + + T E V RY Y KI Q+R ELE +L +
Sbjct: 14 RFNHPA-TPQQVRRPINAPLPGQTAQIQGNRGPQPPKKKKRYADKLIQPKVRELVPESQAYMDLLAFEQKLDSTITRKKIDVQEALKRPQKIKKRLRIYISHTFIAGKE--PEKEGDDAS--------VPMWELRVEGRLLDDMQHPTVGANPRPAPKRKFSSFFKSLVIELDKDIYGPDNHLVEWHRTPQTNETDGFQVKRPGDRPVKCTILLLLDYQPMKFKLHPRLAKVLGIAAETRPRIIEALWQYIKTHKLQDPQDRDTINNDLFLEQCFGVSKMRFMEIPQRLHQLLQQPDPLVLNHIIQRPDDGQD-KTSACYDIDVELEDPVKQQMANFVHNQTNANDIQLLDQKIFDLVDQINEMKLRRDFFLRFSNEPSGFIKKWVVSQNSDLKTLTESS-GDGESDRYATTYSTTDTDEGVSRYMYQKIQQKRAELEQSLGI 443
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Celegans
Match: swsn-2.2 (SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/TrEMBL;Acc:O02101]) HSP 1 Score: 357.451 bits (916), Expect = 5.564e-117 Identity = 195/407 (47.91%), Postives = 265/407 (65.11%), Query Frame = 3
Query: 738 IKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDE-TNAGEIKA-----KRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQIS-CYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
+ +K+K D+ + +R+L P++E YM +L E+ LD L R++L IQE +KRP K+KK+LR+ +S TF I Q T +SL P WELRVEGRL DE A I KRKFSS+FKSLVIELDK++YGPD HLVEWHR T ETDGFQVKR G+ VKC++ L+L++ P ++KL P LA+VLGI T+TR +II ALW YIKT LQDP ERD INCD +L Q F R++F E+PN+L LL DP+ NH+IQ E +Q+S CYDIDVE++D K + + + +I LD K +D+++QIN+ K RR+F+ + +P +FI W+ SQ DLK M ++S G E ER ++ + P T+E V RY + K+NQ+R ELE +L +
Sbjct: 51 LPKKKKYADKCIHPKIRELEPDAENYMALLASEQKLDSTLSRKKLDIQEALKRPSKVKKRLRIYISHTF------IEEKQPEKDTDEASL----PMWELRVEGRLLDEQPPAPAIPGQRPVPKRKFSSFFKSLVIELDKEMYGPDQHLVEWHRTPQTNETDGFQVKRAGDRPVKCRILLLLDNHPAKFKLHPRLAKVLGIATETRPKIIEALWQYIKTHGLQDPQERDIINCDTFLSQCFGVNRMRFMEVPNKLHQLLQQTDPLEFNHIIQRPKEGQEQVSTCYDIDVEMEDPVKQFMHTFVHSPGLANDIQTLDQKCYDIIEQINELKTRRDFYARFYTEPAEFIKSWVMSQNSDLKTMNELS-GDLEAERFAESYVRPETEEGVQRYMFQKVNQKRHELEQSLGV 446
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Celegans
Match: swsn-2.2 (SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/TrEMBL;Acc:O02101]) HSP 1 Score: 357.451 bits (916), Expect = 5.564e-117 Identity = 195/407 (47.91%), Postives = 265/407 (65.11%), Query Frame = 3
Query: 738 IKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDE-TNAGEIKA-----KRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQIS-CYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
+ +K+K D+ + +R+L P++E YM +L E+ LD L R++L IQE +KRP K+KK+LR+ +S TF I Q T +SL P WELRVEGRL DE A I KRKFSS+FKSLVIELDK++YGPD HLVEWHR T ETDGFQVKR G+ VKC++ L+L++ P ++KL P LA+VLGI T+TR +II ALW YIKT LQDP ERD INCD +L Q F R++F E+PN+L LL DP+ NH+IQ E +Q+S CYDIDVE++D K + + + +I LD K +D+++QIN+ K RR+F+ + +P +FI W+ SQ DLK M ++S G E ER ++ + P T+E V RY + K+NQ+R ELE +L +
Sbjct: 51 LPKKKKYADKCIHPKIRELEPDAENYMALLASEQKLDSTLSRKKLDIQEALKRPSKVKKRLRIYISHTF------IEEKQPEKDTDEASL----PMWELRVEGRLLDEQPPAPAIPGQRPVPKRKFSSFFKSLVIELDKEMYGPDQHLVEWHRTPQTNETDGFQVKRAGDRPVKCRILLLLDNHPAKFKLHPRLAKVLGIATETRPKIIEALWQYIKTHGLQDPQERDIINCDTFLSQCFGVNRMRFMEVPNKLHQLLQQTDPLEFNHIIQRPKEGQEQVSTCYDIDVEMEDPVKQFMHTFVHSPGLANDIQTLDQKCYDIIEQINELKTRRDFYARFYTEPAEFIKSWVMSQNSDLKTMNELS-GDLEAERFAESYVRPETEEGVQRYMFQKVNQKRHELEQSLGV 446
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Celegans
Match: K03B8.4 (pep chromosome:WBcel235:V:11394786:11395124:-1 gene:WBGene00010523.1 transcript:K03B8.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:K03B8.4) HSP 1 Score: 45.8246 bits (107), Expect = 5.432e-6 Identity = 25/54 (46.30%), Postives = 34/54 (62.96%), Query Frame = 3
Query: 1770 SQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENAL 1931
SQ DLK M ++S G E ER ++ + P T+E V RY + K+NQ+R ELE L
Sbjct: 2 SQNSDLKTMNELS-GDLEAERFAESYVRPETEEGVQRYMFQKVNQKRHELEQIL 54
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Celegans
Match: T24G10.2 (pep chromosome:WBcel235:III:5440862:5442761:-1 gene:WBGene00020779.1 transcript:T24G10.2.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T24G10.2) HSP 1 Score: 48.9062 bits (115), Expect = 8.364e-6 Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 3
Query: 1332 RAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIK 1457
R ++ ALW+YIK L+DP YI CD LE IF+ R+K
Sbjct: 217 RCDVVKALWDYIKENNLKDPKNGQYIICDSTLESIFKKNRLK 258
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Fly
Match: Bap60 (gene:FBgn0025463 transcript:FBtr0073741) HSP 1 Score: 439.884 bits (1130), Expect = 6.285e-148 Identity = 227/395 (57.47%), Postives = 289/395 (73.16%), Query Frame = 3
Query: 756 MGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAG-EIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
+ +++LP+ VR L+PES+AYM +L E+ LD ++R+RL IQE +KRP K K+KLR+ +S TF P + N+ G+ WELRVEGRL ++ K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C + L+L+ +P Q+KL+P LAR+LG+HT TR II ALW YIKT +LQD HER+YINCD+YLEQIF +R+KFAEIP RL PLL PPDPI+INH I+ G E KQ +CYDIDVEVDD K + ++ + + QEI LD KIH+ VD INQ K REFFL ++ DPQ FI RW+ S+ RDLK+M DV+ G+PEEER+++F+ PWT EAV RYF+ K+NQ+R ELE AL +
Sbjct: 130 LAEKILPQKVRDLVPESQAYMDLLTFERKLDATIMRKRLDIQEALKRPMKQKRKLRIFISNTFYPS-----KEPTNDGEEGAVA-----SWELRVEGRLLEDGKGDPNTKIKRKFSSFFKSLVIELDKELYGPDNHLVEWHRTHTTQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGVHTQTRPVIISALWQYIKTHKLQDAHEREYINCDKYLEQIFSCQRMKFAEIPQRLNPLLHPPDPIVINHFIE-SGAENKQTACYDIDVEVDDTLKNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQMFIHRWIISETRDLKLMTDVA-GNPEEERRAEFYYQPWTHEAVSRYFFTKVNQKRAELEQALGI 512
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Zebrafish
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]) HSP 1 Score: 469.544 bits (1207), Expect = 1.846e-159 Identity = 235/401 (58.60%), Postives = 302/401 (75.31%), Query Frame = 3
Query: 744 RKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKA---KRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
+K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP P+ + T S WELRVEGRL ++T + +A KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR + TQETDGFQVKRPG+ V+C + LML+ +P QYKL+P LAR+LGIHT TR II ALW Y+KT +LQDPHER++INCD+YL+QIF+ +R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K +REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 119 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAK---PDAEDGEGTVAS--------WELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQYKLDPRLARLLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYYQPWAQEAVCRYFYSKVQQRRQELEQALGI 507
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Zebrafish
Match: smarcd3a (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]) HSP 1 Score: 451.825 bits (1161), Expect = 1.995e-153 Identity = 243/461 (52.71%), Postives = 316/461 (68.55%), Query Frame = 3
Query: 624 PGRNIPSRMPH----------------------PNPTLNNNR-RVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
PG +RMPH PNP L+ NR R + NR+ ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFNP P+ + + + S WELRVEG+L D+ K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C L LML+ +P Q+KL+P LAR+LGIHT TR+ II ALW Y+KT +LQD HE++YINCD+Y +QIF R+KF EIP RLT LLLPPDPI+INH+I VD + K+ +CYDIDVEVDD K + + + + QEI +LDNKIH+ ++ INQ K++R+F L +S DP+ +I W+ SQ RDLK+M D G+PEEER+++F+ PW+QEAV RYFY KI QRRQELE AL +
Sbjct: 6 PGMTSGARMPHQGAPMGPPGPPYGGTPQIRPGMPNPALDPNRKRPAPTQPVQPPSVQNRSRNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAK---PDTEDSEGSIAS--------WELRVEGKLLDDPG----KQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVDDPLKGQMNGFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDTV-GNPEEERRAEFYNQPWSQEAVSRYFYCKIQQRRQELEQALAM 450
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Zebrafish
Match: smarcd3a (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]) HSP 1 Score: 452.21 bits (1162), Expect = 2.519e-153 Identity = 243/461 (52.71%), Postives = 316/461 (68.55%), Query Frame = 3
Query: 624 PGRNIPSRMPH----------------------PNPTLNNNR-RVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
PG +RMPH PNP L+ NR R + NR+ ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFNP P+ + + + S WELRVEG+L D+ K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C L LML+ +P Q+KL+P LAR+LGIHT TR+ II ALW Y+KT +LQD HE++YINCD+Y +QIF R+KF EIP RLT LLLPPDPI+INH+I VD + K+ +CYDIDVEVDD K + + + + QEI +LDNKIH+ ++ INQ K++R+F L +S DP+ +I W+ SQ RDLK+M D G+PEEER+++F+ PW+QEAV RYFY KI QRRQELE AL +
Sbjct: 28 PGMTSGARMPHQGAPMGPPGPPYGGTPQIRPGMPNPALDPNRKRPAPTQPVQPPSVQNRSRNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAK---PDTEDSEGSIAS--------WELRVEGKLLDDPG----KQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVDDPLKGQMNGFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDTV-GNPEEERRAEFYNQPWSQEAVSRYFYCKIQQRRQELEQALAM 472
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Zebrafish
Match: smarcd3b (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]) HSP 1 Score: 450.284 bits (1157), Expect = 1.506e-152 Identity = 231/404 (57.18%), Postives = 303/404 (75.00%), Query Frame = 3
Query: 726 NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
NRN ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFN P+ + + + S WELRVEG+L D+ K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C L LML+ +P Q+KL+P LAR+LGIHT TR+ II ALW Y+KT +LQD H+++YINCD+Y +QIF R+KF+EIP RLT LLLPPDPI+INH+I VD + K+ +CYDIDVEV+D K + ++ + + QEI +LDNKIH+ ++ INQ K++R+F L +S DP+ +I WL SQ RDLK+M DV+ G+PEEER+++F+ PW+QEAV RYFY KI QRRQELE AL L
Sbjct: 86 NRNRNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNAAK---PDAEDSEGSIAS--------WELRVEGKLLDDPG----KMKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTGTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVA-GNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQALAL 473
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Zebrafish
Match: smarcd3b (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]) HSP 1 Score: 450.669 bits (1158), Expect = 3.229e-152 Identity = 243/453 (53.64%), Postives = 320/453 (70.64%), Query Frame = 3
Query: 597 GFQNRNIPTPGRNIPSRMPHPNPTLNNNRR-----VSNIPSANLSQSGNRNS-IKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
GF N PGR + R +PTL + ++I S RNS ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFN P+ + + + S WELRVEG+L D+ K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C L LML+ +P Q+KL+P LAR+LGIHT TR+ II ALW Y+KT +LQD H+++YINCD+Y +QIF R+KF+EIP RLT LLLPPDPI+INH+I VD + K+ +CYDIDVEV+D K + ++ + + QEI +LDNKIH+ ++ INQ K++R+F L +S DP+ +I WL SQ RDLK+M DV+ G+PEEER+++F+ PW+QEAV RYFY KI QRRQELE AL L
Sbjct: 72 GFPGPN-EMPGRQMDLRETQSDPTLGSKFSDECWGKTSILRKKWSTQTERNSNSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNAAK---PDAEDSEGSIAS--------WELRVEGKLLDDPG----KMKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTGTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVA-GNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQALAL 507
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Xenopus
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:NCBI gene;Acc:448163]) HSP 1 Score: 468.003 bits (1203), Expect = 7.271e-159 Identity = 235/407 (57.74%), Postives = 304/407 (74.69%), Query Frame = 3
Query: 726 NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGE---IKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
NRN +K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + + + A+ WELRVEGRL ++ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER++I CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K++REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 111 NRNHSAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVAS-----------WELRVEGRLLEDAALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDMNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKIQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGI 505
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Xenopus
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:NCBI gene;Acc:448163]) HSP 1 Score: 450.284 bits (1157), Expect = 7.999e-152 Identity = 226/394 (57.36%), Postives = 294/394 (74.62%), Query Frame = 3
Query: 726 NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGE---IKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKI 1898
NRN +K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + + + A+ WELRVEGRL ++ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER++I CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K++REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+
Sbjct: 111 NRNHSAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVAS-----------WELRVEGRLLEDAALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDMNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKIQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSKV 492
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Xenopus
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:NCBI gene;Acc:448163]) HSP 1 Score: 451.055 bits (1159), Expect = 8.501e-152 Identity = 226/394 (57.36%), Postives = 294/394 (74.62%), Query Frame = 3
Query: 726 NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGE---IKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKI 1898
NRN +K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + + + A+ WELRVEGRL ++ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER++I CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K++REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+
Sbjct: 132 NRNHSAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVAS-----------WELRVEGRLLEDAALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDMNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKIQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSKV 513
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Xenopus
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:NCBI gene;Acc:448163]) HSP 1 Score: 444.121 bits (1141), Expect = 1.929e-150 Identity = 226/390 (57.95%), Postives = 290/390 (74.36%), Query Frame = 3
Query: 726 NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNK 1895
NRN +K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + +A G WELRVEGRL ++ KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER++I CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K++REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K
Sbjct: 63 NRNHSAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKS--------DAEDGEG---TVASWELRVEGRLLED--------KRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDMNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKIQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSK 432
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Xenopus
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:NCBI gene;Acc:448163]) HSP 1 Score: 444.121 bits (1141), Expect = 3.460e-150 Identity = 226/390 (57.95%), Postives = 290/390 (74.36%), Query Frame = 3
Query: 726 NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNK 1895
NRN +K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + +A G WELRVEGRL ++ KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER++I CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K++REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K
Sbjct: 79 NRNHSAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKS--------DAEDGEG---TVASWELRVEGRLLED--------KRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDMNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFIICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKIQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSK 448
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Mouse
Match: Smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:MGI Symbol;Acc:MGI:1933623]) HSP 1 Score: 466.077 bits (1198), Expect = 4.482e-158 Identity = 248/467 (53.10%), Postives = 321/467 (68.74%), Query Frame = 3
Query: 618 PTPGRNIPSRMPHPNPTLNNNRRVSNIPSA--NLSQSG----------------------NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGE---IKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
P PG SRM P++ N PS L+QSG NRN +K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + + + A+ WELRVEGRL ++ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR + TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER+++ CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K +REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 59 PRPGMLPGSRMTPQGPSMGPPGYGGN-PSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVAS-----------WELRVEGRLLEDAALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGI 512
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Mouse
Match: Smarcd2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:MGI Symbol;Acc:MGI:1933621]) HSP 1 Score: 439.499 bits (1129), Expect = 4.540e-148 Identity = 228/437 (52.17%), Postives = 298/437 (68.19%), Query Frame = 3
Query: 627 GRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G P R P ++ R+ +P A R +KR RKM D++LP+ +R+L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S TF+P N G+ WELRVEG+L D+ + K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NVKC L LML+ +P QYKL+P LAR+LG+HT TRA I+ ALW YIK +LQD HER+YINC++Y QIF R++F+EIP +L LL PDPI+INHVI VD + K+ +CYDIDVEVDD K + N+ + + QEI +LD KIH+ ++ INQ K +R+F L +S +PQ FI WL SQ RDLK++ DV G+PEEER++ F+ PW QEAV R+ + K+ QRRQELE L +
Sbjct: 51 GTAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR-RKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNAGTAGTPGGTPAADKVASWELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLKIITDVI-GNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGI 481
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Mouse
Match: Smarcd2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:MGI Symbol;Acc:MGI:1933621]) HSP 1 Score: 441.039 bits (1133), Expect = 5.197e-148 Identity = 228/437 (52.17%), Postives = 298/437 (68.19%), Query Frame = 3
Query: 627 GRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G P R P ++ R+ +P A R +KR RKM D++LP+ +R+L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S TF+P N G+ WELRVEG+L D+ + K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NVKC L LML+ +P QYKL+P LAR+LG+HT TRA I+ ALW YIK +LQD HER+YINC++Y QIF R++F+EIP +L LL PDPI+INHVI VD + K+ +CYDIDVEVDD K + N+ + + QEI +LD KIH+ ++ INQ K +R+F L +S +PQ FI WL SQ RDLK++ DV G+PEEER++ F+ PW QEAV R+ + K+ QRRQELE L +
Sbjct: 98 GTAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR-RKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNAGTAGTPGGTPAADKVASWELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLKIITDVI-GNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGI 528
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Mouse
Match: Smarcd3 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:MGI Symbol;Acc:MGI:1914243]) HSP 1 Score: 434.876 bits (1117), Expect = 9.053e-147 Identity = 222/401 (55.36%), Postives = 302/401 (75.31%), Query Frame = 3
Query: 729 RNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENAL 1931
R+ ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFNP P+ + ++ + S WELRVEG+L D+ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ +V+C L LML+ +P Q+KL+P LAR+LG+HT +R+ I+ ALW Y+KT RLQD H+++YIN D+Y +QIF R+KF+EIP RLT LLLPPDPI+INHVI VD + K+ +CYDIDVEV++ K + ++ + + QEI+ LD+KIH+ ++ INQ K++R+F L +S DP+ ++ L SQ RDLKVM DV+ G+PEEER+++F+ PW+QEAV RYFY KI QRRQELE +L
Sbjct: 65 RSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAK---PDAEDSDGSIAS--------WELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMTDVA-GNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSL 449
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Mouse
Match: Smarcd3 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:MGI Symbol;Acc:MGI:1914243]) HSP 1 Score: 435.261 bits (1118), Expect = 1.647e-146 Identity = 222/401 (55.36%), Postives = 302/401 (75.31%), Query Frame = 3
Query: 729 RNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENAL 1931
R+ ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFNP P+ + ++ + S WELRVEG+L D+ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ +V+C L LML+ +P Q+KL+P LAR+LG+HT +R+ I+ ALW Y+KT RLQD H+++YIN D+Y +QIF R+KF+EIP RLT LLLPPDPI+INHVI VD + K+ +CYDIDVEV++ K + ++ + + QEI+ LD+KIH+ ++ INQ K++R+F L +S DP+ ++ L SQ RDLKVM DV+ G+PEEER+++F+ PW+QEAV RYFY KI QRRQELE +L
Sbjct: 94 RSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAK---PDAEDSDGSIAS--------WELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMTDVA-GNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSL 478
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. UniProt/SwissProt
Match: sp|Q96GM5|SMRD1_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Homo sapiens OX=9606 GN=SMARCD1 PE=1 SV=2) HSP 1 Score: 466.848 bits (1200), Expect = 1.469e-157 Identity = 248/467 (53.10%), Postives = 322/467 (68.95%), Query Frame = 3
Query: 618 PTPGRNIPSRMPHPNPTLNNNRRVSNIPSA--NLSQSG----------------------NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGE---IKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
P PG SRM P++ N PS L+QSG NRN +K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + + + A+ WELRVEGRL +++ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR + TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER+++ CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K +REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 59 PRPGMLPGSRMTPQGPSMGPPGYGGN-PSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVAS-----------WELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGI 512
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. UniProt/SwissProt
Match: sp|Q61466|SMRD1_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Mus musculus OX=10090 GN=Smarcd1 PE=1 SV=3) HSP 1 Score: 466.077 bits (1198), Expect = 3.135e-157 Identity = 248/467 (53.10%), Postives = 321/467 (68.74%), Query Frame = 3
Query: 618 PTPGRNIPSRMPHPNPTLNNNRRVSNIPSA--NLSQSG----------------------NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGE---IKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
P PG SRM P++ N PS L+QSG NRN +K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + + + A+ WELRVEGRL ++ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR + TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER+++ CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K +REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 59 PRPGMLPGSRMTPQGPSMGPPGYGGN-PSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVAS-----------WELRVEGRLLEDAALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGI 512
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. UniProt/SwissProt
Match: sp|Q2TBN1|SMRD1_BOVIN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Bos taurus OX=9913 GN=SMARCD1 PE=2 SV=1) HSP 1 Score: 459.144 bits (1180), Expect = 1.425e-154 Identity = 246/467 (52.68%), Postives = 320/467 (68.52%), Query Frame = 3
Query: 618 PTPGRNIPSRMPHPNPTLNNNRRVSNIPSA--NLSQSG----------------------NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGE---IKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
P PG SRM P++ N PS L+QSG NRN +K+KM D++LP+ +R+L+PES+ YM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP + + + A+ WELRVEGRL +++ + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR + TQETDGFQVKRPG+ NV+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW YIKT +LQDPHER+++ CD+YL+QIF+++R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDID EVDD K + ++ + + QEI LDNKIH+ ++ INQ K +REF L ++ DPQ FI WL SQCRDLKVM DV G+ EEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 59 PRPGMLPGSRMTPQGPSMGPPGYGGN-PSVRPGLAQSGMDQSLKRPAPQQIKQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQDYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVAS-----------WELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDEEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKVMTDVV-GNSEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGI 512
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. UniProt/SwissProt
Match: sp|O54772|SMRD2_RAT (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Rattus norvegicus OX=10116 GN=Smarcd2 PE=1 SV=3) HSP 1 Score: 441.039 bits (1133), Expect = 3.596e-147 Identity = 228/437 (52.17%), Postives = 298/437 (68.19%), Query Frame = 3
Query: 627 GRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G P R P ++ R+ +P A R +KR RKM D++LP+ +R+L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S TF+P N G+ WELRVEG+L D+ + K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NVKC L LML+ +P QYKL+P LAR+LG+HT TRA I+ ALW YIK +LQD HER+YINC++Y QIF R++F+EIP +L LL PDPI+INHVI VD + K+ +CYDIDVEVDD K + N+ + + QEI +LD KIH+ ++ INQ K +R+F L +S +PQ FI WL SQ RDLK++ DV G+PEEER++ F+ PW QEAV R+ + K+ QRRQELE L +
Sbjct: 98 GTAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR-RKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNSGTAGTPGGTPAADKVASWELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLKIITDVI-GNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGI 528
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. UniProt/SwissProt
Match: sp|Q99JR8|SMRD2_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Mus musculus OX=10090 GN=Smarcd2 PE=1 SV=2) HSP 1 Score: 441.039 bits (1133), Expect = 3.635e-147 Identity = 228/437 (52.17%), Postives = 298/437 (68.19%), Query Frame = 3
Query: 627 GRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G P R P ++ R+ +P A R +KR RKM D++LP+ +R+L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S TF+P N G+ WELRVEG+L D+ + K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NVKC L LML+ +P QYKL+P LAR+LG+HT TRA I+ ALW YIK +LQD HER+YINC++Y QIF R++F+EIP +L LL PDPI+INHVI VD + K+ +CYDIDVEVDD K + N+ + + QEI +LD KIH+ ++ INQ K +R+F L +S +PQ FI WL SQ RDLK++ DV G+PEEER++ F+ PW QEAV R+ + K+ QRRQELE L +
Sbjct: 98 GTAAPLRPGMPPTMMDPFRKRLLVPQAQPPMPAQRRGLKR-RKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNAGTAGTPGGTPAADKVASWELRVEGKLLDDPS----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLKIITDVI-GNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGI 528
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. TrEMBL
Match: A0A4Z2CLV6 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin D1 isoform 1 OS=Schistosoma japonicum OX=6182 GN=EWB00_009566 PE=4 SV=1) HSP 1 Score: 513.457 bits (1321), Expect = 4.628e-174 Identity = 262/457 (57.33%), Postives = 346/457 (75.71%), Query Frame = 3
Query: 618 PTPGRNIPS--RMPHPN--PTL--NNNRRVSNIPSANLSQS--------GNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTD---ETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
P PGR I S R P P++ ++ ++S + S + + G + KRKR++ DRLL K VR++IPESE+YM++LE+EK LD VL+R+RL++QE MK+P K+K+KLRV+LS+TF PGS ++ T G PGWEL+VEG+L D + + + K +RKFSS+FKSLVIELD++LYGPDNHLVEWHR + T ETDGFQVKR G++NV+C + LML+ +P QYKL+P LAR+L +HT TR+QI YALWNYIKT RLQDP+E+D+INCD YLEQ+F R++FA+IP+RL PL PPDPI+INH+I V+G+ PK +CYDI+VEVDD YK M+ +Y N +QE++++DNKIH+LV+QINQ K+ REF+LE+S DPQ FI+RWLASQCRD VM D +PGHPEEER ++F+ A WTQEAVMRYFYN+I+QRRQ+LE+AL L
Sbjct: 13 PVPGRAIISGPRASGPGILPSMVGQDSNQISQLASRRMLTADPRLHQIIGRAATAKRKRRLADRLLTKTVREIIPESESYMELLEVEKKLDFVLMRKRLTLQEAMKKPFKVKRKLRVMLSSTFKPGSTVMSVGSDGQPTPGD----CAPGWELKVEGQLLDKPGQPSNNDPKCRRKFSSFFKSLVIELDRELYGPDNHLVEWHRTATTAETDGFQVKRRGDSNVRCTVLLMLDHQPPQYKLDPRLARILALHTGTRSQIFYALWNYIKTHRLQDPNEKDFINCDSYLEQVFGCPRMRFADIPSRLAPLQQPPDPIVINHIITVEGDGPK-TACYDIEVEVDDVYKSMVHSYLTNMHTSQELSSIDNKIHELVEQINQMKVHREFYLEFSRDPQTFISRWLASQCRDFWVMTDATPGHPEEERHAEFYNAHWTQEAVMRYFYNRISQRRQDLEHALGL 464
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. TrEMBL
Match: A0A5K4F244 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 513.072 bits (1320), Expect = 9.319e-174 Identity = 262/458 (57.21%), Postives = 343/458 (74.89%), Query Frame = 3
Query: 618 PTPGRNIPSRMPHPN-----PTL--NNNRRVSNIPSANLSQS--------GNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTD---ETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
PTPGR I S P P+ P++ + +VS + S + + G + KRKR++ DRLL K VR++IPESE+YM++LE+EK LD VL+R+RL++QE MK+P K+K+KLRV+LS+TF PGS ++P T G PGWEL+VEG+L D + + + K +RKFSS+FKSLVIELD++LYGPDNHLVEWHR + T ETDGFQVKR G++NV+C + LML+ +P QYKL+ LAR+L +HT TR+QI YALWNYIKT RLQDP+E+D+INCD YLEQ+F R++FA+IP+RL PL PPDPI+INH+I V+G+ + +CYDI+VEVDD YK M+ Y N QE++ +DNKIH+LV+QINQ K+ REF+LE+S DPQ FI+RWLASQCRD VM D +PGHPEEER ++F+ A WTQEAVMRYFYN+I+QRRQ+LE+AL L
Sbjct: 14 PTPGRAIISG-PRPSGPGILPSIVSQDGNQVSQLVSRRMLPADPRLHQVIGRAATAKRKRRLADRLLTKTVREIIPESESYMELLEVEKKLDFVLMRKRLTLQEAMKKPFKVKRKLRVMLSSTFKPGSTVMPVGSDAQTTPGD----CAPGWELKVEGQLLDKPGQPSNNDPKCRRKFSSFFKSLVIELDRELYGPDNHLVEWHRTATTAETDGFQVKRRGDSNVRCTVLLMLDHQPPQYKLDSRLARILALHTGTRSQIFYALWNYIKTHRLQDPNEKDFINCDSYLEQVFGCPRMRFADIPSRLAPLQQPPDPIVINHIITVEGDGSPKTACYDIEVEVDDVYKSMVHTYLTNMHTGQELSAIDNKIHELVEQINQMKVHREFYLEFSRDPQTFISRWLASQCRDFWVMTDATPGHPEEERHAEFYNAHWTQEAVMRYFYNRISQRRQDLEHALGL 466
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. TrEMBL
Match: A0A0X3P664 (SWIB domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR151956 PE=4 SV=1) HSP 1 Score: 511.146 bits (1315), Expect = 3.021e-173 Identity = 263/452 (58.19%), Postives = 338/452 (74.78%), Query Frame = 3
Query: 618 PTPGRNIPSRMPHPNPTLNNNRRVSN---IP-SANLSQSGNRNSI-KRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSL-QQVGPGWELRVEGRLTDET-----NAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNLG 1940
P G P P PT N+ ++S +P + L Q +RN + K+KR++ DRLL K VRQ+IPESE+YM++LE+EK LD VL R+RL++QE +K+P K K+ LRV+LS+TF PG+ + G L + + PGWEL+VEG+L ++T +A +++ +RKFS++FKSLVIELD+DLYGPDNHLVEWHR +T ETDGFQVKR G NV+C + LML+ +P QYKL+ LAR+LG+HT TR+QI YALWNYIK RLQD HE+D+INCDQYLEQ+F +R++FAEIPNRL L PDPI+INHVI +GE+P + SCYDI+VEVDD YK M+QNY QN NQE+ ++DNKI++LV+QINQ K+ REF+LE+S DPQ FITRWLASQ DL+VM D PGHPEEER++DF+ A W QEAV RYFYN++ QRR ELE A NLG
Sbjct: 13 PARGPTAPGAQPMNVPTNQNSPQMSGRRLLPIDSRLHQIASRNPLTKKKRRLADRLLTKTVRQIIPESESYMELLEVEKKLDLVLSRKRLTLQESLKQPAKTKRTLRVVLSSTFRPGT------VGSIGVDGQPLTESMPPGWELKVEGQLLEKTGQSGNSALDLRYRRKFSTFFKSLVIELDRDLYGPDNHLVEWHRTPSTAETDGFQVKRTGMNNVRCTILLMLDYQPPQYKLDARLARLLGLHTGTRSQIFYALWNYIKVHRLQDSHEKDFINCDQYLEQVFGCQRMRFAEIPNRLAQLQHAPDPIVINHVIINEGEDPNKTSCYDIEVEVDDVYKCMVQNYLQNTQSNQELASIDNKIYELVEQINQMKVHREFYLEFSQDPQGFITRWLASQSHDLQVMTDAVPGHPEEERRADFYHASWMQEAVKRYFYNRVIQRRHELEQAFNLG 458
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. TrEMBL
Match: A0A564Y6I5 (SWIB domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS3388 PE=4 SV=1) HSP 1 Score: 499.975 bits (1286), Expect = 5.647e-169 Identity = 256/448 (57.14%), Postives = 333/448 (74.33%), Query Frame = 3
Query: 624 PGRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGS--NLIPNDQMNNATHGSSLQQVGPGWELRVEGRL-------TDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNLG 1940
P N+P+R P P + R + N P + + N+ + K+KR+M DRLL K VRQ+IPESE+YM++LE+EK LD VL+R+RL++QE +K+P K K+ LRV+LS+ F PG+ ++ P+ Q NN PGWEL+VEG+L + + K +RKFS++FKSLVIELD +LYGPDNHLVEWHR ++TQETDGFQVKR G++NV+C + LML+ +P QYKL+P LAR+LG+HT TR+QI YALWNYIK RLQD HE+D+INCD YLEQ+F R++FAEIP+RL L L PDPIIINHVI D E+P + CYDI+VEVDD YK M+QNY QN NQE+T +DNKI++LVDQINQ K+ REF+LE+S DP FITRWLASQ DL+ M D +PGHPE+ER ++F++ PW EA+ RY Y ++ QRRQELE+ALN+G
Sbjct: 9 PPFNMPTRGP-PAQNIQQRRLLPNDPRMHHVVAKNQFN-KKKRRMADRLLTKTVRQIIPESESYMELLEVEKKLDLVLMRKRLTLQESLKQPLKTKRTLRVMLSSAFKPGTPDSIGPDGQSNNDG-------CPPGWELKVEGQLFEKPPGQSSSPPVVDTKFRRKFSTFFKSLVIELDHELYGPDNHLVEWHRTASTQETDGFQVKRSGDSNVRCTIILMLDYQPPQYKLDPRLARILGLHTGTRSQIFYALWNYIKVHRLQDAHEKDFINCDIYLEQVFGCSRMRFAEIPSRLIQLQLAPDPIIINHVIVNDSEDPNKTLCYDIEVEVDDAYKSMVQNYLQNTQSNQELTAIDNKIYELVDQINQMKVHREFYLEFSQDPHTFITRWLASQSHDLQQMTDATPGHPEQERHAEFYEEPWVHEAIKRYLYQRVVQRRQELEHALNIG 447
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. TrEMBL
Match: A0A4S2L1N5 (SWIB domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_010164 PE=4 SV=1) HSP 1 Score: 500.745 bits (1288), Expect = 6.133e-169 Identity = 246/398 (61.81%), Postives = 318/398 (79.90%), Query Frame = 3
Query: 756 MGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQ-QVGPGWELRVEGRLTD---ETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
+ DRLLPK +R++IPESE+YM++LE+EK LD VL+R+RL++QE MKRP K+K+KLRV+LS+TF PG IP + G L PGWELRVEG+L D + + + K +RKFSS+FKSLVIELD+DLYGPDNHLVEWHR T ETDGFQVKR G++NV+C + LML+ +P +YKL+P LAR+L +H+ TR+QI YALW+YIKT +LQDP+E+D+INCD YLEQ+F R++FAEIP+RL PL PPDP++INHVI V+G+ PK +CYDIDVEVDD YK M+ +Y + NQE++ +D+KIH+ V+QINQ K+ REF+LE+S DPQ FI+RWLASQ RD VM D +PGHPEEER+++F+ APWTQEAVMRYFYN+I+QRRQ+LE+AL L
Sbjct: 75 LADRLLPKTIREIIPESESYMELLEVEKKLDFVLMRKRLTLQEAMKRPFKVKRKLRVMLSSTFKPG---IPAGAV--GPDGQRLTGDAAPGWELRVEGQLLDKPGQPSNNDAKYRRKFSSFFKSLVIELDRDLYGPDNHLVEWHRTPTTAETDGFQVKRRGDSNVRCTVLLMLDHQPPEYKLDPRLARILALHSGTRSQIFYALWSYIKTHKLQDPNEKDFINCDPYLEQVFNCPRMRFAEIPSRLVPLQQPPDPVVINHVITVEGDSPK-TACYDIDVEVDDVYKTMVHSYLSSVQSNQELSAIDSKIHEFVEQINQMKVHREFYLEFSRDPQAFISRWLASQARDYWVMTDATPGHPEEERRAEFYHAPWTQEAVMRYFYNRISQRRQDLEHALGL 466
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Cavefish
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:NCBI gene;Acc:103047592]) HSP 1 Score: 466.077 bits (1198), Expect = 5.416e-158 Identity = 234/401 (58.35%), Postives = 301/401 (75.06%), Query Frame = 3
Query: 744 RKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKA---KRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
+K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP P+ + T S WELRVEGRL ++T + +A KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ V+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW Y+KT +LQDPHER++INCD+YL+QIF+ +R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K +REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 138 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAK---PDAEDGEGTVAS--------WELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGI 526
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Cavefish
Match: smarcd3b (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]) HSP 1 Score: 452.981 bits (1164), Expect = 5.667e-154 Identity = 238/428 (55.61%), Postives = 308/428 (71.96%), Query Frame = 3
Query: 660 NPTLNNNRR--VSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
NPT+ NR+ + NRN ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFNP A S + WELRVEG+L D+ K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C L LML+ +P Q+KL+P LAR+LGIHT TR+ II ALW YIKT +LQD H+++YINCD+Y +QIF R+KF+EIP RLT LLLPPDPI+INH+I VD + K+ +CYDIDVEV+D K + N+ + + QEI +LDNKIH+ ++ INQ K++R+F L +S DP+ +I WL SQ RDLK+M DV G+PEEER+++F+ PW+QEAV RYFY KI QRRQELE AL +
Sbjct: 40 NPTMEANRKRPAPSQQQMQQQAVQNRNRNTKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPA----------KADADDSDGSIA-SWELRVEGKLLDDP----AKVKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSNFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVV-GNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQALAI 451
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Cavefish
Match: smarcd3b (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]) HSP 1 Score: 436.032 bits (1120), Expect = 1.625e-146 Identity = 229/420 (54.52%), Postives = 300/420 (71.43%), Query Frame = 3
Query: 660 NPTLNNNRR--VSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQ 1913
NPT+ NR+ + NRN ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFNP A S + WELRVEG+L D+ K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C L LML+ +P Q+KL+P LAR+LGIHT TR+ II ALW YIKT +LQD H+++YINCD+Y +QIF R+KF+EIP RLT LLLPPDPI+INH+I VD + K+ +CYDIDVEV+D K + N+ + + QEI +LDNKIH+ ++ INQ K++R+F L +S DP+ +I WL SQ RDLK+M DV G+PEEER+++F+ PW+QEAV RYFY K+ + Q
Sbjct: 40 NPTMEANRKRPAPSQQQMQQQAVQNRNRNTKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPA----------KADADDSDGSIA-SWELRVEGKLLDDP----AKVKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSNFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVV-GNPEEERRAEFYHQPWSQEAVSRYFYCKVREEIQ 443
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Cavefish
Match: smarcd3a (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like [Source:NCBI gene;Acc:103039772]) HSP 1 Score: 434.491 bits (1116), Expect = 7.228e-146 Identity = 229/406 (56.40%), Postives = 294/406 (72.41%), Query Frame = 3
Query: 744 RKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQ----------VDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENAL 1931
++RKM D++LP+ +R+L+PES+AYM +L E LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFNP P+ + + S WELRVEG+L D+ K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ NV+C L LML+ +P Q+KL+P LAR+LGIHT TR+ II ALW Y+KT +LQD HE++YINCD+Y +QIF R+KF EIP RLT LLLPPDPI+INHVI+ VD + K+ +CYDIDVEVDD K + + + + QEI LDNKIH+ ++ INQ K++R+F L +S DP+ +I W+ SQ RDLK+M DV G+PEEER+++F+ W+QEAV RYFY KI QRRQELE AL
Sbjct: 121 KRRKMADKILPQRIRELVPESQAYMDLLAFEHKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAK---PDSDDSEGSIAS--------WELRVEGKLLDDPG----KQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHEKEYINCDKYFQQIFDCPRLKFCEIPQRLTNLLLPPDPIVINHVIRSRPSVPTSNSVDPNDHKKTACYDIDVEVDDPLKTQMSGFLLSTANQQEIATLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWICSQNRDLKLMTDVV-GNPEEERRAEFYNQSWSQEAVSRYFYCKIQQRRQELEQAL 510
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Cavefish
Match: smarcd2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]) HSP 1 Score: 427.943 bits (1099), Expect = 3.702e-144 Identity = 220/405 (54.32%), Postives = 289/405 (71.36%), Query Frame = 3
Query: 723 GNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G R IKR RKM D++LP+ +R L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S T P G ++V WELRVEG+L D+ K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ +VKC L LML+ +P QYKL+P LAR+LG+HT TR+ I+ ALW YIK +LQD HE++YINC++Y QIF R++F+EIP +L LL PDPI+INHVI VD + K+ +C+DIDVEVDD K + ++ + + QEI L+ KIH+ ++ INQ K +R+F L +SN PQ FI WL SQ RDLK+M D + G+PEEER+S+F++APW QEAV RY ++K++QRRQELE L +
Sbjct: 65 GPRRGIKR-RKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYISNTCTPAK-----------PEGEEAEKVA-SWELRVEGKLLDDPG----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVSVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRSSIMQALWLYIKNNKLQDSHEKEYINCNRYFRQIFACHRMRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACFDIDVEVDDPLKSQMTSFLSSTTNQQEIAALEMKIHETIESINQLKTQRDFMLSFSNSPQDFIQDWLKSQSRDLKLMTDTA-GNPEEERRSEFYQAPWVQEAVGRYVFSKVHQRRQELEQVLGI 451
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Sea Lamprey
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]) HSP 1 Score: 460.299 bits (1183), Expect = 2.629e-157 Identity = 241/427 (56.44%), Postives = 309/427 (72.37%), Query Frame = 3
Query: 675 NNRRVSNIPSANLSQSGNR--NSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKA---KRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVI-QVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
+ +R + P LS+S + N +K+KM D++LP+ VR+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLRV +S TFNP +++ + A+ WELRVEGRL D+ + + A KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR S+TQETDGFQVKRPG+ NV+CK+ LML+ +P Q+KL HLAR+LGIHT TR II ALW YIKT RLQD HER+YINCD Y +QIF R+KF+EIP RL LL+PPDPI+INH I VD + K+ +CYD+DVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K+ REF L ++ DPQ FI WL SQ RDLK M DV G+PEEER+++F+ PW+QEAV RYFY+K+ QRRQELE AL +
Sbjct: 45 SRKRPATQPLMGLSKSAQQVENYCTKKKKMADKILPQRVRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPMKQKRKLRVFISNTFNPAKPDADDEEGSVAS-----------WELRVEGRLLDDPASSKFDANKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTSSTQETDGFQVKRPGDVNVRCKVLLMLDYQPPQFKLNSHLARLLGIHTQTRPAIIQALWQYIKTHRLQDSHEREYINCDSYFQQIFDCPRMKFSEIPQRLHGLLMPPDPIVINHTISSVDPNDQKKTACYDVDVEVDDMLKAQMNSFLLSTASQQEIAALDNKIHETIETINQLKIHREFMLGFAQDPQGFINDWLQSQSRDLKTMTDVV-GNPEEERRAEFYFQPWSQEAVCRYFYSKVQQRRQELEQALGI 459
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Yeast
Match: UAF30 (Subunit of UAF (upstream activation factor) complex; UAF is an RNA polymerase I specific transcription stimulatory factor composed of Uaf30p, Rrn5p, Rrn9p, Rrn10p, histones H3 and H4; targeting factor for the UAF that facilitates activation of many rDNA genes; deletion decreases cellular growth rate; UAF30 has a paralog, TRI1, that arose from the whole genome duplication [Source:SGD;Acc:S000005821]) HSP 1 Score: 51.9878 bits (123), Expect = 6.963e-8 Identity = 35/109 (32.11%), Postives = 50/109 (45.87%), Query Frame = 3
Query: 1113 SLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIF 1439
+L IEL K++ E N ET G V++ T K + + L LA +LG H TR +++ LW YIK LQ+P+ + I CD+ LE I
Sbjct: 77 TLAIELTKEITVSKRSSGE---EKNDSETKGTHVEKKKGTVSKSPI------STRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELIL 176
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Yeast
Match: SNF12 (73 kDa subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; relocates to the cytosol under hypoxic conditions; deletion mutants are temperature-sensitive; SNF12 has a paralog, RSC6, that arose from the whole genome duplication [Source:SGD;Acc:S000005306]) HSP 1 Score: 48.1358 bits (113), Expect = 3.142e-6 Identity = 36/125 (28.80%), Postives = 58/125 (46.40%), Query Frame = 3
Query: 1053 TDETNA--GEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQ--YKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINC 1415
TD+ NA GE AK+ SS L E K Y P+N + + DG +KR G+ NV+C + ++ +S P + P L ++G+ + T I++++ YI L E + N
Sbjct: 240 TDQNNATMGEETAKKDMSSTTPKL--ESVKWQYDPNNPV----------DFDGLDIKRVGSENVECTISILRKSSPEEPFMSYSPQLTAIIGLKSGTSHDAIFSIYKYIHLNELLTNDESAFENL 352 HSP 2 Score: 47.7506 bits (112), Expect = 4.750e-6 Identity = 37/141 (26.24%), Postives = 66/141 (46.81%), Query Frame = 3
Query: 759 GDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIK---------------KKLRVILSTTFNPGSNLIPND--QMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIEL 1130
D ++P + +LIPE ++ Q+++ EK LD + R L ++ + + + K K LR+ +S N+ N QM+ + W +R+EGRL D A + A+ KFSS+ +S+V++
Sbjct: 57 SDMVIPDHLAELIPELYSFQQLVDSEKRLDHFIHLRNLHMKRMVAQWERSKLSQEFLYPHLNFPNVKFLRIFIS-------NVSENQPWQMDTNNEADLMALENATWTMRIEGRLLDNVQAND-PAREKFSSFIESIVVDF 189
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Yeast
Match: TRI1 (Non-essential sumoylated protein of unknown function; similar to components of human SWI/SNF complex including SMRD3; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm, nucleus and nucleolus; TRI1 has a paralog, UAF30, that arose from the whole genome duplication [Source:SGD;Acc:S000004846]) HSP 1 Score: 46.9802 bits (110), Expect = 3.269e-6 Identity = 22/59 (37.29%), Postives = 31/59 (52.54%), Query Frame = 3
Query: 1287 LEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFA 1463
L L + LG R Q++ +W YIK LQ+P +R I CD+ +E IF K F+
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKKMTMFS 184
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Nematostella
Match: EDO46175 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQW4]) HSP 1 Score: 432.565 bits (1111), Expect = 1.837e-147 Identity = 225/395 (56.96%), Postives = 290/395 (73.42%), Query Frame = 3
Query: 756 MGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGR-LTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
M D++LP+ VR L+PES+AYM +L E+ LD ++R+R+ IQE +KRP K KKKLRV L+T+F +A G +L P WELRVEGR L D +N E + KRKFS+YFKSLVIELD++LYGPDNHLVEWHR SNTQETDGFQVKRPG NVKC + +L+ +P QYKLEP LAR+LGIHT TR I+ A+W YIK+ LQD HER+YIN D+Y +QIF+ R+KF+EIP RL LL+PPDPI+I+H+I D E K+++CYDIDVEVDD K + ++ + + EI DNKI++ V+ IN K+ REFFL ++ DPQ FIT+W+ SQ +DLKVM DV G+PEEER++DF+ PW+QEAV RYFY+K+ Q+R ELE AL +
Sbjct: 1 MADKVLPQRVRDLVPESQAYMDLLAFERKLDATIMRKRMDIQEALKRPIKTKKKLRVHLTTSFQTPKP--------DAEDGEAL---VPSWELRVEGRILEDPSNKSEPQRKRKFSTYFKSLVIELDRELYGPDNHLVEWHRTSNTQETDGFQVKRPGEENVKCTIMFLLDYQPPQYKLEPRLARLLGIHTQTRPVIVNAIWQYIKSHNLQDSHEREYINNDRYFQQIFECPRMKFSEIPQRLNQLLVPPDPIVIHHLISKDTPENKRVTCYDIDVEVDDTLKAQMHSFLLSTASQNEIATYDNKIYETVETINSLKINREFFLGFARDPQDFITQWIQSQSQDLKVMTDVV-GNPEEERRADFYYLPWSQEAVCRYFYSKVQQKRAELEQALGI 383
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Nematostella
Match: EDO27997 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T7Q2]) HSP 1 Score: 293.508 bits (750), Expect = 2.284e-94 Identity = 165/323 (51.08%), Postives = 221/323 (68.42%), Query Frame = 3
Query: 744 RKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEV---DDNYKLMLQNYAQNASYNQEITNLDNKI---HDLVDQIN 1694
RK+KM D++LP+ VR L+PES+AYM +L E+ LD ++R+R+ IQE +KRP K KKKLRV L+T+F +A G +L P WELRVEGR+ ++ + K +FS+YFKSLVIELD++LYGPDNHLVEWHR SNTQETDGFQVKRPG NVKC + +L+ +P QYKLEP LAR+LGIHT TR I+ A+W YIK+ LQD HER+YIN D+Y +QIF+ R+KF+EIP RL LL+PPDPI+I+H+I++ ++ S Y + E+ DD K + ++ + + EI DNK+ H V I+
Sbjct: 2 RKKKMADKVLPQRVRDLVPESQAYMDLLAFERKLDATIMRKRMDIQEALKRPIKTKKKLRVHLTTSFQTPKP--------DAEDGEAL---VPSWELRVEGRILEDVTS----EKEEFSTYFKSLVIELDRELYGPDNHLVEWHRTSNTQETDGFQVKRPGEENVKCTIMFLLDYQPPQYKLEPRLARLLGIHTQTRPVIVNAIWQYIKSHNLQDSHEREYINNDRYFQQIFECPRMKFSEIPQRLNQLLVPPDPIVIHHLIRIFLQD----SQYKLSCEIALLDDTLKAQMHSFLLSTASQNEIATYDNKVSPNHQCVKSIH 305
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Nematostella
Match: EDO25954 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TD99]) HSP 1 Score: 84.3445 bits (207), Expect = 2.836e-20 Identity = 37/62 (59.68%), Postives = 51/62 (82.26%), Query Frame = 3
Query: 1719 FLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQ 1904
FL ++ DPQ FIT+W+ SQ +DLKVM DV G+PEEER++DF+ PW+QEAV RYFY+K+++
Sbjct: 1 FLGFARDPQDFITQWIQSQSQDLKVMTDVV-GNPEEERRADFYYLPWSQEAVCRYFYSKVSK 61
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Medaka
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:NCBI gene;Acc:101155187]) HSP 1 Score: 467.233 bits (1201), Expect = 1.073e-158 Identity = 234/401 (58.35%), Postives = 302/401 (75.31%), Query Frame = 3
Query: 744 RKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKA---KRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
+K+KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K K+KLR+ +S TFNP P+ + T S WELRVEGRL ++T + +A KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR + TQETDGFQVKRPG+ +V+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW Y+KT +LQDPHER++INCD+YL QIF+ +R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K +REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 123 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAK---PDAEDGEGTVAS--------WELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVSVRCTVLLMLDYQPPQFKLDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLHQIFETQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYYQPWAQEAVCRYFYSKVQQRRQELEQALGI 511
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Medaka
Match: smarcd2 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 [Source:NCBI gene;Acc:101159227]) HSP 1 Score: 435.261 bits (1118), Expect = 2.104e-146 Identity = 230/451 (51.00%), Postives = 307/451 (68.07%), Query Frame = 3
Query: 597 GFQNRNIPTP---GRNIPSRMPHPNPTLNNNR-RVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
G +P P G N+P R P ++ +R R + G+ ++RKM D++LP+ +R L+PES+AYM +L E+ LDQ + R+R+ IQE +K+P K+KLR+ +S TF P + G ++V WELRVEG+L +E K KRKFSS+FKSLVIELDK+LYGPDNHLVEWHR TQETDGFQVKRPG+ NVKC L LML+ +P QYKL+P LAR+LG+HT TRA I+ ALW YIK +LQD HE+++INC++Y QIF R++F+EIP +L LL PDPI+INH+I VD + K+ +CYDIDVEVDD K + ++ +A+ QEI L+ KIH+ ++ INQ K R+F L +SN PQ+FI WL SQCRDLK+M DV+ G+PEEER+++F++APW EAV RY Y+K+ QRRQELE L +
Sbjct: 63 GVMGSQMPGPSYGGGNLPMR-----PGMDASRKRFLHHQQQQQEALGSLRRGAKRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYISNTFTP-----------SKPEGEESEKVS-SWELRVEGKLLEEPG----KQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQALWLYIKNNKLQDCHEKEFINCNRYFRQIFNCPRMRFSEIPMKLAGLLQHPDPIVINHIISVDPTDQKKTACYDIDVEVDDPLKTQMNSFLSSANSQQEIATLEMKIHETIEYINQLKTERDFMLSFSNSPQEFIQDWLKSQCRDLKLMTDVT-GNPEEERRAEFYEAPWMPEAVGRYVYSKVQQRRQELEQVLGI 491
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Medaka
Match: smarcd3b (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:NCBI gene;Acc:101162326]) HSP 1 Score: 421.394 bits (1082), Expect = 9.958e-141 Identity = 235/439 (53.53%), Postives = 310/439 (70.62%), Query Frame = 3
Query: 624 PGRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKI-KKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
P R + R P +PTL +N ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFNP P+ ++ + S WELRVEG+L D+ K K+KFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ +V+C L LML+ +P Q+KL+P LAR+LGIHT TR+ II ALW Y+KT +LQD H+++YINCD+Y +QIF R+KF+EIP RLT LLLPPDPI+INHVI VD + K+ +CYDIDVEV+D K + ++ + + QEI +LDNKIH+ ++ INQ K++R+F L +S DP+ +I WL SQ RDLK+M DV G+PEEER++ F+ PW+QEAV RYFY KI QRRQELE AL +
Sbjct: 110 PARQMDMREPQSDPTLGSN--------------------AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQQKRKLRLYISNTFNPAR---PDADDSDGSIAS--------WELRVEGKLLDDPG----KQKKKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVV-GNPEEERRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAV 512
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Medaka
Match: smarcd3b (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:NCBI gene;Acc:101162326]) HSP 1 Score: 417.927 bits (1073), Expect = 8.083e-140 Identity = 229/405 (56.54%), Postives = 301/405 (74.32%), Query Frame = 3
Query: 726 NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKI-KKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
NR ++RKM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+R+ IQE +KRP K K+KLR+ +S TFNP P+ ++ + S WELRVEG+L D+ K K+KFSS+FKSLVIELDKDLYGPDNHLVEWHR TQETDGFQVKRPG+ +V+C L LML+ +P Q+KL+P LAR+LGIHT TR+ II ALW Y+KT +LQD H+++YINCD+Y +QIF R+KF+EIP RLT LLLPPDPI+INHVI VD + K+ +CYDIDVEV+D K + ++ + + QEI +LDNKIH+ ++ INQ K++R+F L +S DP+ +I WL SQ RDLK+M DV G+PEEER++ F+ PW+QEAV RYFY KI QRRQELE AL +
Sbjct: 94 NRARNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQQKRKLRLYISNTFNPAR---PDADDSDGSIAS--------WELRVEGKLLDDPG----KQKKKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVV-GNPEEERRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAV 482
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Medaka
Match: smarcd1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:NCBI gene;Acc:101155187]) HSP 1 Score: 416.772 bits (1070), Expect = 1.351e-139 Identity = 217/404 (53.71%), Postives = 276/404 (68.32%), Query Frame = 3
Query: 726 NRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNL 1937
NRN K+K KM D++LP+ +R+L+PES+AYM +L E+ LDQ ++R+RL IQE +KRP K T + K KRKFSS+FKSLVIELDKDLYGPDNHLVEWHR + TQETDGFQVKRPG+ +V+C + LML+ +P Q+KL+P LAR+LGIHT TR II ALW Y+KT +LQDPHER++INCD+YL QIF+ +R+KF+EIP RL LL+PP+PIIINHVI VD + K+ +CYDIDVEVDD K + ++ + + QEI LDNKIH+ ++ INQ K +REF L ++ DPQ FI WL SQCRDLK M DV G+PEEER+++F+ PW QEAV RYFY+K+ QRRQELE AL +
Sbjct: 117 NRNHTKKK-KMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIK-------------------------------------------------TAVSKYEATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVSVRCTVLLMLDYQPPQFKLDPRLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLHQIFETQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVV-GNPEEERRAEFYYQPWAQEAVCRYFYSKVQQRRQELEQALGI 469
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Planmine SMEST
Match: SMESG000051399.1 (SMESG000051399.1) HSP 1 Score: 895.19 bits (2312), Expect = 0.000e+0 Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 3
Query: 588 MYGGFQNRNIPTPGRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEXXXXXXXXXXXXXXXXXNHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNLG 1940
MYGGFQNRNIPTPGRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEIPNRLTPLLLPPDPIIINHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNLG
Sbjct: 1 MYGGFQNRNIPTPGRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSIKRKRKMGDRLLPKVVRQLIPESEAYMQMLELEKDLDQVLIRRRLSIQEEMKRPCKIKKKLRVILSTTFNPGSNLIPNDQMNNATHGSSLQQVGPGWELRVEGRLTDETNAGEIKAKRKFSSYFKSLVIELDKDLYGPDNHLVEWHRNSNTQETDGFQVKRPGNTNVKCKLFLMLESRPTQYKLEPHLARVLGIHTDTRAQIIYALWNYIKTQRLQDPHERDYINCDQYLEQIFQAKRIKFAEIPNRLTPLLLPPDPIIINHVIQVDGEEPKQISCYDIDVEVDDNYKLMLQNYAQNASYNQEITNLDNKIHDLVDQINQTKLRREFFLEYSNDPQKFITRWLASQCRDLKVMLDVSPGHPEEERKSDFFKAPWTQEAVMRYFYNKINQRRQELENALNLG 451 The following BLAST results are available for this feature:
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 3
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 3
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30030460 ID=SMED30030460|Name=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D|organism=Schmidtea mediterranea sexual|type=transcript|length=1980bpback to top protein sequence of SMED30030460-orf-1 >SMED30030460-orf-1 ID=SMED30030460-orf-1|Name=SMED30030460-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=454bp MYGGFQNRNIPTPGRNIPSRMPHPNPTLNNNRRVSNIPSANLSQSGNRNSback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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