MACPF domain-containing protein

Overview


Name	MACPF domain-containing protein
Smed ID	SMED30030421
Length (bp)	802

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of MACPF domain-containing protein (SMED30030421) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for MACPF domain-containing protein (SMED30030421) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30030421

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
parapharyngeal region	SMED30030421	h1SMcG0006951	SmedASXL_010331	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
parapharyngeal region	SMED30030421	h1SMcG0006951	SmedASXL_010330	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
Smed sexual biotype	SMED30030421	h1SMcG0006951	Contig31625	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30030421	h1SMcG0006951	Contig31625	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
gut	SMED30030421	h1SMcG0006951	dd_Smed_v4_12605_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30030421	h1SMcG0006950	Contig31625	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30030421	h1SMcG0006950	Contig31625	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
reproductive organ	SMED30030421	h1SMcG0006951	Contig48191	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30030421	h1SMcG0006951	Contig48191	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of MACPF domain-containing protein vs. Ensembl Human
Match: MPEG1 (macrophage expressed 1 [Source:HGNC Symbol;Acc:HGNC:29619])

HSP 1 Score: 92.4337 bits (228), Expect = 1.311e-20
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 3

Query:  195 KLNYQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            ++  Q C+        +VLPG GWDNL N+DMGRV++L +S C  + D +Y+IP+E+   P+K S +E++SEI   + NY SSTS SIN   E S+   K+ G FS E  ++K  Q
Sbjct:   28 EVGVQKCKNALKLPVLEVLPGGGWDNLRNVDMGRVMELTYSNCRTTEDGQYIIPDEIFTIPQKQSNLEMNSEILESWANYQSSTSYSIN--TELSLFS-KVNGKFSTEFQRMKTLQ 140

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BLAST of MACPF domain-containing protein vs. Ensembl Zebrafish
Match: mpeg1.1 (macrophage expressed 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7347])

HSP 1 Score: 91.6633 bits (226), Expect = 1.847e-20
Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 3

Query:  213 CQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVE-GSVEDLKLGGAFSFENTQIKNDQ 542
            C+ +++    +VLPG GWDNL NIDMGRV++L++S C  + D  YLIP+E+ + P+K S VE +SEI   ++   SSTS S+N  V   SV    L   FS EN ++K  Q
Sbjct:   33 CRKNSSLTALEVLPGGGWDNLRNIDMGRVMNLSYSQCQTTEDGVYLIPDEVFVIPQKVSGVETNSEIIMSWLEQKSSTSSSVNADVSFFSV----LNAKFSTENQRMKTHQ 139

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Query:  213 CQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVE-GSVEDLKLGGAFSFENTQIKNDQ 542
            C+ +++    +VLPG GWDNL NIDMGRV++L++S C  + D  YLIP+E+ + P+K S VE +SEI   ++   SSTS S+N  V   SV    L   FS EN ++K  Q
Sbjct:   33 CRKNSSLTALEVLPGGGWDNLRNIDMGRVMNLSYSQCQTTEDGVYLIPDEVFVIPQKVSGVETNSEIIMSWLEQKSSTSSSVNADVSFFSV----LNAKFSTENQRMKTHQ 139

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BLAST of MACPF domain-containing protein vs. Ensembl Zebrafish
Match: mpeg1.2 (macrophage expressed 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050522-305])

HSP 1 Score: 89.3521 bits (220), Expect = 1.152e-19
Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 3

Query:  207 QNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            + C+ ++     +VLPG GWDNL N+D+GRV++L +S C  + D  YLIP+E+ + P KTS VE  SE    +++  SSTS SIN   + S   + L G FS ENT++K  Q
Sbjct:   28 RECRQNSNLTALEVLPGGGWDNLRNLDVGRVMNLTYSQCQTTEDGLYLIPDEVFVIPRKTSGVETHSETIMSWLDQRSSTSGSIN--ADASYLTV-LNGKFSEENTRMKIHQ 136

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BLAST of MACPF domain-containing protein vs. Ensembl Zebrafish
Match: mpeg1.3 (macrophage expressed 1, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081105-5])

HSP 1 Score: 88.1965 bits (217), Expect = 2.259e-19
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 3

Query:  213 CQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            C  ++     +VLPG GWDNL NIDMGRV++L++S C  + D  YLIP+E+ + P+K + VE +SE+   +++  SSTS SIN  V        L G FS E+ +IK  Q
Sbjct:   33 CHKNSNLVALEVLPGGGWDNLRNIDMGRVMNLSYSQCQTTEDGVYLIPDEVFVIPQKENTVETNSEMIMSWLDQKSSTSSSINADVSFFSW---LNGKFSREHQRIKTHQ 139

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BLAST of MACPF domain-containing protein vs. Ensembl Zebrafish
Match: mpeg1.1 (macrophage expressed 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7347])

HSP 1 Score: 68.1662 bits (165), Expect = 1.941e-14
Identity = 28/59 (47.46%), Postives = 43/59 (72.88%), Query Frame = 3

Query:  213 CQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTS 389
            C+ +++    +VLPG GWDNL NIDMGRV++L++S C  + D  YLIP+E+ + P+K +
Sbjct:   33 CRKNSSLTALEVLPGGGWDNLRNIDMGRVMNLSYSQCQTTEDGVYLIPDEVFVIPQKKT 91

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BLAST of MACPF domain-containing protein vs. Ensembl Mouse
Match: Pfpl (pore forming protein-like [Source:MGI Symbol;Acc:MGI:1860266])

HSP 1 Score: 91.2781 bits (225), Expect = 2.552e-20
Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 3

Query:  204 YQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            +Q CQ        +VLPG GWDNL N+DMG+V+DL ++ C  + D +Y+IP+++   P+K S +E++SEI   + NY S+TS SINL ++      ++ G FS E  +IK  Q
Sbjct:   31 FQKCQNALNLPVLEVLPGGGWDNLRNMDMGQVMDLTYNNCKTTEDGQYIIPDDVFTIPQKESNLEMNSEILDSWENYRSTTSFSINLNLD---YRPRVNGKFSSEFQRIKTTQ 140

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BLAST of MACPF domain-containing protein vs. Ensembl Mouse
Match: Mpeg1 (macrophage expressed gene 1 [Source:MGI Symbol;Acc:MGI:1333743])

HSP 1 Score: 90.1225 bits (222), Expect = 6.504e-20
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 3

Query:  204 YQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSIN--LAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            +Q C+        +VLPG GWDNL N+DMGRV+DL ++ C  + D +Y+IP+E+   P+K S +E++SE+   ++NY S+TS SIN  LA+   V      G FS E  ++K  Q
Sbjct:   38 FQICKNALKLPVLEVLPGGGWDNLRNVDMGRVMDLTYTNCKTTEDGQYIIPDEVYTIPQKESNLEMNSEVLESWMNYQSTTSLSINTELALFSRVN-----GKFSTEFQRMKTLQ 147

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BLAST of MACPF domain-containing protein vs. UniProt/SwissProt
Match: sp|Q2KJC3|MPEG1_BOVIN (Macrophage-expressed gene 1 protein OS=Bos taurus OX=9913 GN=MPEG1 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 8.074e-21
Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = 3

Query:  204 YQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            +QNC+         VLPG GWDNL N+D GRV++L +S C  + D +Y++P+E+   P+K S +E++S+I   +VNY SSTS SIN+  E S+   K+ G FS E  +IK  Q
Sbjct:   31 FQNCKNALKLPVLPVLPGGGWDNLRNVDTGRVMELAYSHCRTTEDGQYIVPDEIFTIPQKQSNLEMNSKILESWVNYQSSTSNSINM--ELSLFS-KVNGKFSLEFQRIKTLQ 140

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BLAST of MACPF domain-containing protein vs. UniProt/SwissProt
Match: sp|Q2M385|MPEG1_HUMAN (Macrophage-expressed gene 1 protein OS=Homo sapiens OX=9606 GN=MPEG1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 6.295e-20
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 3

Query:  195 KLNYQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            ++  Q C+        +VLPG GWDNL N+DMGRV++L +S C  + D +Y+IP+E+   P+K S +E++SEI   + NY SSTS SIN   E S+   K+ G FS E  ++K  Q
Sbjct:   28 EVGVQKCKNALKLPVLEVLPGGGWDNLRNVDMGRVMELTYSNCRTTEDGQYIIPDEIFTIPQKQSNLEMNSEILESWANYQSSTSYSIN--TELSLFS-KVNGKFSTEFQRMKTLQ 140

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BLAST of MACPF domain-containing protein vs. UniProt/SwissProt
Match: sp|Q5RBP9|MPEG1_PONAB (Macrophage-expressed gene 1 protein OS=Pongo abelii OX=9601 GN=MPEG1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 6.355e-20
Identity = 50/116 (43.10%), Postives = 72/116 (62.07%), Query Frame = 3

Query:  195 KLNYQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            ++  Q C+        +VLPG GWDNL N+DMGRV++L +S C  + D +Y+IP+E+   P+K S +E++SEI   + NY SSTS SIN   E S+   K+ G FS E  ++K  Q
Sbjct:   28 EVGVQKCKNALKLPVLEVLPGGGWDNLRNVDMGRVMELTYSNCRTTEDGQYIIPDEIFTIPQKQSNLEMNSEILESWANYQSSTSYSIN--TELSLFS-KVNGKFSTEFQRMKTLQ 140

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BLAST of MACPF domain-containing protein vs. UniProt/SwissProt
Match: sp|Q9WV57|MPEG1_RAT (Macrophage-expressed gene 1 protein OS=Rattus norvegicus OX=10116 GN=Mpeg1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 6.531e-20
Identity = 51/113 (45.13%), Postives = 72/113 (63.72%), Query Frame = 3

Query:  204 YQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            +Q C+        +VLPG GWDNL NIDMGRV+DL ++ C  + D +Y+IP+E+   P+K S +E++SEI   +VNY S+TS SIN   E S+   K+ G FS E  ++K  Q
Sbjct:   31 FQTCKDTLKLPVLEVLPGGGWDNLRNIDMGRVIDLTYTNCKTTEDGQYIIPDEVYTIPQKESNLEMNSEIRDSWVNYQSTTSFSIN--TELSLFS-KVNGKFSTEFQRMKTLQ 140

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BLAST of MACPF domain-containing protein vs. UniProt/SwissProt
Match: sp|A1L314|MPEG1_MOUSE (Macrophage-expressed gene 1 protein OS=Mus musculus OX=10090 GN=Mpeg1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.533e-19
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 3

Query:  204 YQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSIN--LAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            +Q C+        +VLPG GWDNL N+DMGRV+DL ++ C  + D +Y+IP+E+   P+K S +E++SE+   ++NY S+TS SIN  LA+   V      G FS E  ++K  Q
Sbjct:   31 FQICKNALKLPVLEVLPGGGWDNLRNVDMGRVMDLTYTNCKTTEDGQYIIPDEVYTIPQKESNLEMNSEVLESWMNYQSTTSLSINTELALFSRVN-----GKFSTEFQRMKTLQ 140

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BLAST of MACPF domain-containing protein vs. TrEMBL
Match: A0A267EFV7 (MACPF domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig003757g1 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.573e-22
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 3

Query:  240 FDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIK 533
            F  +PG GWDNL N DMG V DL+F+ C  S+D  Y++P  + LYP K S +E+ SE+  HF NYTSS S SINL   G +   ++GG  S E  Q+K
Sbjct:   51 FSSMPGGGWDNLRNKDMGLVADLSFTDCALSDDGMYVLPKNVILYPRKESNIEVMSEVIDHFSNYTSSLSVSINLEASGKIAAFRIGGKLSNEFQQVK 148

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BLAST of MACPF domain-containing protein vs. TrEMBL
Match: A0A267FTE5 (MACPF domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig003757g3 PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.241e-22
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 3

Query:  240 FDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIK 533
            F  +PG GWDNL N DMG V DL+F+ C  S+D  Y++P  + LYP K S +E+ SE+  HF NYTSS S SINL   G +   ++GG  S E  Q+K
Sbjct:   51 FSSMPGGGWDNLRNKDMGLVADLSFTDCALSDDGMYVLPKNVILYPRKESNIEVMSEVIDHFSNYTSSLSVSINLEASGKIAAFRIGGKLSNEFQQVK 148

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BLAST of MACPF domain-containing protein vs. TrEMBL
Match: A0A1I8IZJ2 (MACPF domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.039e-21
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 3

Query:  240 FDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIK 533
            F  +PG GWDNL N DMG V DL+F+ C  S+D  Y++P  + LYP K S +E+ SE+  HF NYTSS S SINL   G +   ++GG  S E  Q+K
Sbjct:   51 FSSMPGGGWDNLRNKDMGLVADLSFTDCALSDDGMYVLPKNVILYPRKESNIEVMSEVIDHFSNYTSSLSVSINLEASGKIAAFRIGGKLSNEFQQVK 148

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BLAST of MACPF domain-containing protein vs. TrEMBL
Match: A0A1I8FUV4 (MACPF domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.142e-21
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 3

Query:  240 FDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIK 533
            F  +PG GWDNL N DMG V DL+F+ C  S+D  Y++P  + LYP K S +E+ SE+  HF NYTSS S SINL   G +   ++GG  S E  Q+K
Sbjct:   51 FSSMPGGGWDNLRNKDMGLVADLSFTDCALSDDGMYVLPKNVILYPRKESNIEVMSEVIDHFSNYTSSLSVSINLEASGKIAAFRIGGKLSNEFQQVK 148

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BLAST of MACPF domain-containing protein vs. TrEMBL
Match: A0A2B4RFA8 (Macrophage-expressed gene 1 protein OS=Stylophora pistillata OX=50429 GN=Mpeg1 PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.397e-21
Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = 3

Query:  207 QNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            +NC L +    F+VLPG GWDNL N+ MG V  +N+S C  S+D KYLIP+++ LYP K S+V + +E++ H+ NY+S+T+KSIN    G+     + G++S E   +K  Q
Sbjct:   44 RNCPLASGVYRFEVLPGGGWDNLRNLHMGAVSVMNYSKCKTSDDGKYLIPDDVFLYPVKESKVHVFAEMYDHWNNYSSTTTKSINAEASGTFGFGSVSGSYSSEFESVKKHQ 155

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BLAST of MACPF domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000015822.2 (pep primary_assembly:Astyanax_mexicanus-2.0:6:8259512:8262317:1 gene:ENSAMXG00000015374.2 transcript:ENSAMXT00000015822.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 65.855 bits (159), Expect = 7.305e-12
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 3

Query:  288 MGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            MGRV+++++S C  + D  YLIP+E+ + P+K S+VE++SEI S ++   SSTS SIN   +GS   + L   FS EN ++K  Q
Sbjct:    1 MGRVMNMSYSQCQTTEDGVYLIPDEVFVIPQKVSKVEMNSEIISSWLEQRSSTSGSIN--ADGSFFSV-LNCKFSAENQRMKTHQ 82

[Close]

BLAST of MACPF domain-containing protein vs. Ensembl Cavefish
Match: MPEG1 (macrophage expressed 1 [Source:HGNC Symbol;Acc:HGNC:29619])

HSP 1 Score: 65.0846 bits (157), Expect = 1.334e-11
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 3

Query:  288 MGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVE-GSVEDLKLGGAFSFENTQIKNDQ 542
            MGRV+++++S C  + D  YLIP+E+ + P+K S+VE++SEI S ++   SSTS SIN  V   SV + K    FS EN ++K  Q
Sbjct:    1 MGRVMNISYSQCQTTEDGVYLIPDEVFVIPQKVSKVEMNSEIISSWLEQKSSTSSSINADVSFFSVVNAK----FSTENQRMKTHQ 82

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BLAST of MACPF domain-containing protein vs. Ensembl Nematostella
Match: EDO28266 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T6Y8])

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-22
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 3

Query:  243 DVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEG 476
            +VLPG GWDNL N+ MG V  +N+SLC  S+D K+LIP+ + LYP K S+V   +E + H+ NY+S+T+KSIN   + 
Sbjct:    1 EVLPGGGWDNLRNLHMGAVSAMNYSLCRSSDDGKFLIPDNVFLYPVKKSKVNTFAEFYDHWNNYSSTTTKSINAEAKA 78

[Close]

BLAST of MACPF domain-containing protein vs. Ensembl Nematostella
Match: EDO37879 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEK6])

HSP 1 Score: 86.6557 bits (213), Expect = 2.372e-19
Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 3

Query:  243 DVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            +VLPG GWDNL N+ MG V  +N+SLC  S+D K+L+P+ + LYP K S+V   +E + H+ NY+S+T+KSIN   + S     + G+FS E   +K  Q
Sbjct:    1 EVLPGGGWDNLRNLHMGAVSAMNYSLCRSSDDGKFLVPDNVFLYPVKKSKVNTFAEFYDHWNNYSSTTTKSINAEAKASFGFGSVSGSFSSEYESVKKHQ 100

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BLAST of MACPF domain-containing protein vs. Ensembl Medaka
Match: MPEG1 (macrophage-expressed gene 1 protein [Source:NCBI gene;Acc:101169041])

HSP 1 Score: 78.9518 bits (193), Expect = 2.784e-16
Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 3

Query:  237 TFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLK----LGGAFSFENTQIKNDQ 542
              +VLPG GWDNL N+DMGRV++ ++  C  + D  YLIP+E+ + P K + VE +SEI S +++   ST+ SIN       +D+     L   FS E T++K  Q
Sbjct:   69 ALEVLPGGGWDNLRNMDMGRVMNFSYFQCQTTEDGLYLIPDEVFVVPYKETGVETNSEIISSWLDQKGSTAASIN-------DDVSFLPVLNAKFSVEITRMKTHQ 167

[Close]

BLAST of MACPF domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000006104.2 (pep primary_assembly:ASM223467v1:9:9652430:9669002:1 gene:ENSORLG00000027013.1 transcript:ENSORLT00000006104.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 78.1814 bits (191), Expect = 5.881e-16
Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 3

Query:  207 QNCQLDT--TQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLK-LGGAFSFENTQIKNDQ 542
            + C+  T  + K  +VLPG GWDNL N+DMGRV++  +  C  + D  YL P+E+ + P K + VE +SEI S +++   ST+ SIN      V DL  L   FS E  ++K  Q
Sbjct:   29 RQCRASTNLSLKALEVLPGGGWDNLRNMDMGRVMNFGYFQCQTTKDGLYLNPDEVFVVPYKETGVETNSEIISSWLDQKGSTAASIN----DDVSDLPVLNAKFSSEIIRMKTHQ 139

[Close]

BLAST of MACPF domain-containing protein vs. Planmine SMEST
Match: SMESG000044680.1 (SMESG000044680.1)

HSP 1 Score: 298.516 bits (763), Expect = 1.168e-103
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 3

Query:  108 MTILWVFLFASIHGRFVYGILNTKEVTNLKLNYQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            MTILWVFLFASIHGRFVYGILNTKEVTNLKLNYQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ
Sbjct:    1 MTILWVFLFASIHGRFVYGILNTKEVTNLKLNYQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 145

[Close]

BLAST of MACPF domain-containing protein vs. Planmine SMEST
Match: SMESG000044677.1 (SMESG000044677.1)

HSP 1 Score: 182.185 bits (461), Expect = 4.507e-54
Identity = 90/146 (61.64%), Postives = 111/146 (76.03%), Query Frame = 3

Query:  105 IMTILWVFLFASIHGRFVYGILNTKEVTNLKLNYQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            I  +L + LF S        +  + EV  +K +YQ C+L + QKTFDVLPG+GWDNLANIDMGR+LDLNFS C FSNDNKYLIPN+LA+YPEK+S+VEISSEIF HF NYTS +S+SIN+  EG     K+GG+FS ENT+IK+DQ
Sbjct:    3 IQIVLIISLFRS-------AVKGSNEVNTIKDSYQLCRLTSKQKTFDVLPGSGWDNLANIDMGRILDLNFSKCSFSNDNKYLIPNQLAIYPEKSSQVEISSEIFHHFSNYTSMSSQSINVGAEGGYGIFKIGGSFSTENTKIKSDQ 141

[Close]

BLAST of MACPF domain-containing protein vs. Planmine SMEST
Match: SMESG000044677.1 (SMESG000044677.1)

HSP 1 Score: 182.57 bits (462), Expect = 8.182e-54
Identity = 90/147 (61.22%), Postives = 111/147 (75.51%), Query Frame = 3

Query:  105 IMTILWVFLFASIHGRFVYGILNTKEVTNLKLNYQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQG 545
            I  +L + LF S        +  + EV  +K +YQ C+L + QKTFDVLPG+GWDNLANIDMGR+LDLNFS C FSNDNKYLIPN+LA+YPEK+S+VEISSEIF HF NYTS +S+SIN+  EG     K+GG+FS ENT+IK+DQ 
Sbjct:    3 IQIVLIISLFRS-------AVKGSNEVNTIKDSYQLCRLTSKQKTFDVLPGSGWDNLANIDMGRILDLNFSKCSFSNDNKYLIPNQLAIYPEKSSQVEISSEIFHHFSNYTSMSSQSINVGAEGGYGIFKIGGSFSTENTKIKSDQA 142

[Close]

BLAST of MACPF domain-containing protein vs. Planmine SMEST
Match: SMESG000044681.1 (SMESG000044681.1)

HSP 1 Score: 177.563 bits (449), Expect = 3.680e-51
Identity = 84/126 (66.67%), Postives = 101/126 (80.16%), Query Frame = 3

Query:  165 ILNTKEVTNLKLNYQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            +  + EV  +K  YQ CQL   Q+TFDVLPG+GWDNLANI MGR+LDLNFS C FSNDNKYLIPN+LA+YPEK+S+VEISSEIF HF NYTS +S+SIN+  EG     K+GG+FS ENT+IK+DQ
Sbjct:   16 VKGSNEVNTIKDAYQLCQLMPNQRTFDVLPGSGWDNLANIGMGRILDLNFSKCSFSNDNKYLIPNQLAIYPEKSSQVEISSEIFRHFSNYTSMSSQSINVGAEGGYGIFKIGGSFSTENTKIKSDQ 141

[Close]

BLAST of MACPF domain-containing protein vs. Planmine SMEST
Match: SMESG000044682.1 (SMESG000044682.1)

HSP 1 Score: 168.318 bits (425), Expect = 1.314e-47
Identity = 79/113 (69.91%), Postives = 94/113 (83.19%), Query Frame = 3

Query:  204 YQNCQLDTTQKTFDVLPGTGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISSEIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQ 542
            Y+ C L + Q TFDVLPG+GWDNLAN+ MGR+LDLNFS C FSNDNKYLIPN+LA+YP+KTS+VEISSEIF HF NYTS +S+SINL  EG     K+GG+FS ENT+IK+DQ
Sbjct:   32 YELCHLRSNQLTFDVLPGSGWDNLANVGMGRILDLNFSKCSFSNDNKYLIPNQLAIYPQKTSQVEISSEIFRHFSNYTSMSSQSINLDAEGLFGHWKIGGSFSTENTKIKSDQ 144

The following BLAST results are available for this feature:

BLAST of MACPF domain-containing protein vs. Ensembl Human
BLAST of MACPF domain-containing protein vs. Ensembl Celegans
BLAST of MACPF domain-containing protein vs. Ensembl Fly
BLAST of MACPF domain-containing protein vs. Ensembl Zebrafish
BLAST of MACPF domain-containing protein vs. Ensembl Xenopus
BLAST of MACPF domain-containing protein vs. Ensembl Mouse
BLAST of MACPF domain-containing protein vs. UniProt/SwissProt
BLAST of MACPF domain-containing protein vs. TrEMBL
BLAST of MACPF domain-containing protein vs. Ensembl Cavefish
BLAST of MACPF domain-containing protein vs. Ensembl Sea Lamprey
BLAST of MACPF domain-containing protein vs. Ensembl Yeast
BLAST of MACPF domain-containing protein vs. Ensembl Nematostella
BLAST of MACPF domain-containing protein vs. Ensembl Medaka
BLAST of MACPF domain-containing protein vs. Planmine SMEST

BLAST of MACPF domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 1


Match Name	E-value	Identity	Description
MPEG1	1.311e-20	43.10	macrophage expressed 1 [Source:HGNC Symbol;Acc:HGN...	[more]

BLAST of MACPF domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of MACPF domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of MACPF domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
mpeg1.1	1.847e-20	45.05	macrophage expressed 1, tandem duplicate 1 [Source...	[more]
mpeg1.1	1.847e-20	45.05	macrophage expressed 1, tandem duplicate 1 [Source...	[more]
mpeg1.2	1.152e-19	43.75	macrophage expressed 1, tandem duplicate 2 [Source...	[more]
mpeg1.3	2.259e-19	43.64	macrophage expressed 1, tandem duplicate 3 [Source...	[more]
mpeg1.1	1.941e-14	47.46	macrophage expressed 1, tandem duplicate 1 [Source...	[more]

BLAST of MACPF domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of MACPF domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2


Match Name	E-value	Identity	Description
Pfpl	2.552e-20	41.59	pore forming protein-like [Source:MGI Symbol;Acc:M...	[more]
Mpeg1	6.504e-20	41.74	macrophage expressed gene 1 [Source:MGI Symbol;Acc...	[more]

BLAST of MACPF domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q2KJC3\|MPEG1_BOVIN	8.074e-21	44.25	Macrophage-expressed gene 1 protein OS=Bos taurus ...	[more]
sp\|Q2M385\|MPEG1_HUMAN	6.295e-20	43.10	Macrophage-expressed gene 1 protein OS=Homo sapien...	[more]
sp\|Q5RBP9\|MPEG1_PONAB	6.355e-20	43.10	Macrophage-expressed gene 1 protein OS=Pongo abeli...	[more]
sp\|Q9WV57\|MPEG1_RAT	6.531e-20	45.13	Macrophage-expressed gene 1 protein OS=Rattus norv...	[more]
sp\|A1L314\|MPEG1_MOUSE	4.533e-19	41.74	Macrophage-expressed gene 1 protein OS=Mus musculu...	[more]

BLAST of MACPF domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A267EFV7	3.573e-22	48.98	MACPF domain-containing protein OS=Macrostomum lig...	[more]
A0A267FTE5	6.241e-22	48.98	MACPF domain-containing protein OS=Macrostomum lig...	[more]
A0A1I8IZJ2	1.039e-21	48.98	MACPF domain-containing protein OS=Macrostomum lig...	[more]
A0A1I8FUV4	1.142e-21	48.98	MACPF domain-containing protein OS=Macrostomum lig...	[more]
A0A2B4RFA8	2.397e-21	43.75	Macrophage-expressed gene 1 protein OS=Stylophora ...	[more]

BLAST of MACPF domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
ENSAMXT00000015822.2	7.305e-12	43.53	pep primary_assembly:Astyanax_mexicanus-2.0:6:8259...	[more]
MPEG1	1.334e-11	44.19	macrophage expressed 1 [Source:HGNC Symbol;Acc:HGN...	[more]

BLAST of MACPF domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of MACPF domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of MACPF domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2


Match Name	E-value	Identity	Description
EDO28266	5.302e-22	50.00	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37879	2.372e-19	45.00	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of MACPF domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2


Match Name	E-value	Identity	Description
MPEG1	2.784e-16	40.57	macrophage-expressed gene 1 protein [Source:NCBI g...	[more]
ENSORLT00000006104.2	5.881e-16	40.00	pep primary_assembly:ASM223467v1:9:9652430:9669002...	[more]

BLAST of MACPF domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000044680.1	1.168e-103	100.00	SMESG000044680.1	[more]
SMESG000044677.1	4.507e-54	61.64	SMESG000044677.1	[more]
SMESG000044677.1	8.182e-54	61.22	SMESG000044677.1	[more]
SMESG000044681.1	3.680e-51	66.67	SMESG000044681.1	[more]
SMESG000044682.1	1.314e-47	69.91	SMESG000044682.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30030421 ID=SMED30030421|Name=MACPF domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=802bp
ATTGCATGAAGATATTTCAAATTGTTATTTAATGTGCACCCCATGACGCA
AATTATAATTGTATAAAATAATTATCTCATTCAAGAAGTTTCATTTCAGG
AGCAATAATGACCATTTTATGGGTGTTTTTATTTGCATCAATTCATGGAC
GTTTTGTATATGGAATATTAAATACAAAGGAAGTCACGAATTTAAAACTT
AATTACCAGAATTGTCAGTTAGATACGACCCAAAAGACGTTTGATGTGCT
ACCAGGAACAGGATGGGATAACTTGGCCAACATTGATATGGGAAGAGTTT
TGGACCTTAACTTCTCCTTATGCTTATTCTCCAATGATAATAAATATCTG
ATTCCCAATGAATTGGCTCTATATCCGGAAAAAACTTCAAGAGTAGAAAT
TTCTAGTGAAATCTTTAGTCATTTTGTGAATTATACATCTTCAACGTCAA
AATCCATCAACTTGGCCGTAGAAGGAAGTGTTGAGGATTTGAAATTAGGT
GGAGCGTTTTCATTTGAAAATACACAAATAAAGAATGATCAAGGTTGATC
AACGTTTGAGTGACAACCTCTCAATGTATTTACCCAATTCTTCGCAGTTG
ATAACAAGTGGGCCACCCTCTGACCGGGAGACTACAACAGCTCGTGAAGT
TCACTGCTAGTTTTCATTTGACAAAAAGAAATTTTATTCCGCTTCGATAT
TTAATAATTGAAATCATGATATTTTCCATTTTTCAACGCTCTGGCGCTAT
TTCAATCAAGCAAAATGACATATTGGACACAAAATCCATTTTCACCAGAG
TT

protein sequence of SMED30030421-orf-1

>SMED30030421-orf-1 ID=SMED30030421-orf-1|Name=SMED30030421-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=147bp
MTILWVFLFASIHGRFVYGILNTKEVTNLKLNYQNCQLDTTQKTFDVLPG
TGWDNLANIDMGRVLDLNFSLCLFSNDNKYLIPNELALYPEKTSRVEISS
EIFSHFVNYTSSTSKSINLAVEGSVEDLKLGGAFSFENTQIKNDQG*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR039707	MPEG1

Vocabulary: **cellular component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039707	Macrophage-expressed gene 1 protein	PANTHER	PTHR31463	FAMILY NOT NAMED	coord: 29..145
None	No IPR available	PANTHER	PTHR31463:SF4	MACROPHAGE-EXPRESSED GENE 1 PROTEIN	coord: 29..145
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.704

Main menu

MACPF domain-containing protein

Zeng et. al., 2018

▻ Overview

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Owlery

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