RNA-binding protein 25

Overview
NameRNA-binding protein 25
Smed IDSMED30030342
Length (bp)2350
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of RNA-binding protein 25 (SMED30030342) t-SNE clustered cells

Violin plots show distribution of expression levels for RNA-binding protein 25 (SMED30030342) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of RNA-binding protein 25 (SMED30030342) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for RNA-binding protein 25 (SMED30030342) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30030342

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30030342SMESG000074815.1 dd_Smed_v4_7685_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30030342SMESG000074815.1 dd_Smed_v4_7685_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Human
Match: RBM25 (RNA binding motif protein 25 [Source:HGNC Symbol;Acc:HGNC:23244])

HSP 1 Score: 141.354 bits (355), Expect = 2.927e-37
Identity = 68/110 (61.82%), Postives = 83/110 (75.45%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEE 567
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK+ +  +   E VT  +EE
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEE 194
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Human
Match: RBM25 (RNA binding motif protein 25 [Source:HGNC Symbol;Acc:HGNC:23244])

HSP 1 Score: 142.124 bits (357), Expect = 6.344e-37
Identity = 96/207 (46.38%), Postives = 123/207 (59.42%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTR-----TEEEKKERINLIYA------READEDRNALTQIKKIIKEAGSXXXXXXXXXXX--------XXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK+ +  +   E VT       +EE K R  +I        RE   + NA +Q      E+ S      KEKKE          L    L+   +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQ------ESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFR 285
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Human
Match: RBM25 (RNA binding motif protein 25 [Source:HGNC Symbol;Acc:HGNC:23244])

HSP 1 Score: 142.124 bits (357), Expect = 6.864e-37
Identity = 94/207 (45.41%), Postives = 121/207 (58.45%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTR-----TEEEKKERINLIYA------READEDRNALTQIKKIIKEAGSXXXXXXXXX--------XXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK+ +  +   E VT       +EE K R  +I        RE   + NA +Q      E+ S      KEK            L    L+   +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQ------ESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFR 285
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Human
Match: RBM25 (RNA binding motif protein 25 [Source:HGNC Symbol;Acc:HGNC:23244])

HSP 1 Score: 142.124 bits (357), Expect = 3.354e-34
Identity = 96/207 (46.38%), Postives = 123/207 (59.42%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTR-----TEEEKKERINLIYA------READEDRNALTQIKKIIKEAGSXXXXXXXXXXX--------XXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK+ +  +   E VT       +EE K R  +I        RE   + NA +Q      E+ S      KEKKE          L    L+   +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQ------ESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFR 285

HSP 2 Score: 140.584 bits (353), Expect = 1.143e-33
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1 
Query: 1876 KSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            K+A  GT +   E++  +K +I+ IPT K +LFAYP++W  +D   +E RI+PW++KKI+ YIGEEE +L  F+C +V+ H +P  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  722 KNATKGT-VNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 843
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Human
Match: RBM25 (RNA binding motif protein 25 [Source:HGNC Symbol;Acc:HGNC:23244])

HSP 1 Score: 142.124 bits (357), Expect = 3.354e-34
Identity = 96/207 (46.38%), Postives = 123/207 (59.42%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTR-----TEEEKKERINLIYA------READEDRNALTQIKKIIKEAGSXXXXXXXXXXX--------XXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK+ +  +   E VT       +EE K R  +I        RE   + NA +Q      E+ S      KEKKE          L    L+   +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQ------ESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFR 285

HSP 2 Score: 140.584 bits (353), Expect = 1.143e-33
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1 
Query: 1876 KSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            K+A  GT +   E++  +K +I+ IPT K +LFAYP++W  +D   +E RI+PW++KKI+ YIGEEE +L  F+C +V+ H +P  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  722 KNATKGT-VNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 843
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Celegans
Match: rbm-25 (RNA Binding Motif protein homolog [Source:UniProtKB/TrEMBL;Acc:H2L2D0])

HSP 1 Score: 155.992 bits (393), Expect = 2.113e-40
Identity = 116/414 (28.02%), Postives = 207/414 (50.00%), Query Frame = 1 
Query: 1123 FKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKE----HNPNVEAIILRMEQSMQEHLQKRLKFDFDS----MPL-------------------------VSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTER---------KLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            FKQ+   + DK+ AY  RL+ WE+RE++  K YE E+ +   ++  + +E ++L++F EDYDDEK D KYY  ++  +R      E  AD++DRM+E ++IE  ++++++E     + N+E    +  +  +E   ++++ D  S     PL                         + D+ K   I ++ +  ++ ++  + + GN     I D    NT  +  + + N+            +Q  +     P+ +  + +           N +D + ++ K       I   ER         + L K+II  IP  K +LF + IEWD +D  ++  RI+PWV KK+  ++GEE+ S   FICDQ+    TP +IL D+A++++E+A+ FV+KMWRLLIY  + ++ G+
Sbjct:  107 FKQM---MLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQKEGKRLKLFLEDYDDEKDDPKYYTSSQFFQRKRDYEREREADQKDRMQEQQEIEELKRQIMEEAANDESINIEEEARKRHKLKEEEAMRKMRADSGSPNPHQPLGQSANGEKSSSEEESDSEKTDVKKEIKDEIKEEPIDVDISEHVDPNTGSSGTNGNFGWKAIGDDSSLNTKINRPIANGNQ------------NQPQIKKEASPIPIAQRLSGVFG-------NDDDEDDVHSKKKLKPFEITREERMQVMSAEEKRELTKQIIKTIPATKDELFVHRIEWDQLDGKWMNDRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQATPQEILKDVAVIIDEDAEQFVIKMWRLLIYEGQARRLGI 498
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Celegans
Match: rbm-25 (RNA Binding Motif protein homolog [Source:UniProtKB/TrEMBL;Acc:H2L2D0])

HSP 1 Score: 155.606 bits (392), Expect = 3.299e-39
Identity = 116/414 (28.02%), Postives = 207/414 (50.00%), Query Frame = 1 
Query: 1123 FKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKE----HNPNVEAIILRMEQSMQEHLQKRLKFDFDS----MPL-------------------------VSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTER---------KLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            FKQ+   + DK+ AY  RL+ WE+RE++  K YE E+ +   ++  + +E ++L++F EDYDDEK D KYY  ++  +R      E  AD++DRM+E ++IE  ++++++E     + N+E    +  +  +E   ++++ D  S     PL                         + D+ K   I ++ +  ++ ++  + + GN     I D    NT  +  + + N+            +Q  +     P+ +  + +           N +D + ++ K       I   ER         + L K+II  IP  K +LF + IEWD +D  ++  RI+PWV KK+  ++GEE+ S   FICDQ+    TP +IL D+A++++E+A+ FV+KMWRLLIY  + ++ G+
Sbjct:  313 FKQM---MLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQKEGKRLKLFLEDYDDEKDDPKYYTSSQFFQRKRDYEREREADQKDRMQEQQEIEELKRQIMEEAANDESINIEEEARKRHKLKEEEAMRKMRADSGSPNPHQPLGQSANGEKSSSEEESDSEKTDVKKEIKDEIKEEPIDVDISEHVDPNTGSSGTNGNFGWKAIGDDSSLNTKINRPIANGNQ------------NQPQIKKEASPIPIAQRLSGVFG-------NDDDEDDVHSKKKLKPFEITREERMQVMSAEEKRELTKQIIKTIPATKDELFVHRIEWDQLDGKWMNDRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQATPQEILKDVAVIIDEDAEQFVIKMWRLLIYEGQARRLGI 704

HSP 2 Score: 105.916 bits (263), Expect = 2.677e-23
Identity = 51/126 (40.48%), Postives = 83/126 (65.87%), Query Frame = 1 
Query:  160 VIIPKPQLPTTVSNAETNQKFSSFERPITT-VFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDR 534
            ++  + ++P   + A+     SS ++P ++ VF+GNIS+K SD  ++ +L +CGNV SWKR++G++GKLQ FGFC + + E TLR +R+L++F + DK L VK D K  + L      ++ AIE+R
Sbjct:   22 IVFGQMRMPGQHTPAQQ----SSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKVRDDL------RKNAIENR 137
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Celegans
Match: rbm-25 (RNA Binding Motif protein homolog [Source:UniProtKB/TrEMBL;Acc:H2L2D0])

HSP 1 Score: 153.295 bits (386), Expect = 1.687e-38
Identity = 118/417 (28.30%), Postives = 208/417 (49.88%), Query Frame = 1 
Query: 1123 FKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQ-------KRLKFDFDS----MPL-------------------------VSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTER---------KLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            FKQ+   + DK+ AY  RL+ WE+RE++  K YE E+ +   ++  + +E ++L++F EDYDDEK D KYY  ++  +R      E  AD++DRM+E ++IE  ++++++E   N E+I +  E   +  L+       ++++ D  S     PL                         + D+ K   I ++ +  ++ ++  + + GN     I D    NT  +  + + N+            +Q  +     P+ +  + +           N +D + ++ K       I   ER         + L K+II  IP  K +LF + IEWD +D  ++  RI+PWV KK+  ++GEE+ S   FICDQ+    TP +IL D+A++++E+A+ FV+KMWRLLIY  + ++ G+
Sbjct:  313 FKQM---MLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQKEGKRLKLFLEDYDDEKDDPKYYTSSQFFQRKRDYEREREADQKDRMQEQQEIEELKRQIMEE-AANDESINIEEEARKRHKLKFQEEEAMRKMRADSGSPNPHQPLGQSANGEKSSSEEESDSEKTDVKKEIKDEIKEEPIDVDISEHVDPNTGSSGTNGNFGWKAIGDDSSLNTKINRPIANGNQ------------NQPQIKKEASPIPIAQRLSGVFG-------NDDDEDDVHSKKKLKPFEITREERMQVMSAEEKRELTKQIIKTIPATKDELFVHRIEWDQLDGKWMNDRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQATPQEILKDVAVIIDEDAEQFVIKMWRLLIYEGQARRLGI 706

HSP 2 Score: 105.916 bits (263), Expect = 2.666e-23
Identity = 51/126 (40.48%), Postives = 83/126 (65.87%), Query Frame = 1 
Query:  160 VIIPKPQLPTTVSNAETNQKFSSFERPITT-VFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDR 534
            ++  + ++P   + A+     SS ++P ++ VF+GNIS+K SD  ++ +L +CGNV SWKR++G++GKLQ FGFC + + E TLR +R+L++F + DK L VK D K  + L      ++ AIE+R
Sbjct:   22 IVFGQMRMPGQHTPAQQ----SSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKVRDDL------RKNAIENR 137
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Celegans
Match: rbm-25 (RNA Binding Motif protein homolog [Source:UniProtKB/TrEMBL;Acc:H2L2D0])

HSP 1 Score: 153.295 bits (386), Expect = 1.687e-38
Identity = 118/417 (28.30%), Postives = 208/417 (49.88%), Query Frame = 1 
Query: 1123 FKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQ-------KRLKFDFDS----MPL-------------------------VSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTER---------KLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            FKQ+   + DK+ AY  RL+ WE+RE++  K YE E+ +   ++  + +E ++L++F EDYDDEK D KYY  ++  +R      E  AD++DRM+E ++IE  ++++++E   N E+I +  E   +  L+       ++++ D  S     PL                         + D+ K   I ++ +  ++ ++  + + GN     I D    NT  +  + + N+            +Q  +     P+ +  + +           N +D + ++ K       I   ER         + L K+II  IP  K +LF + IEWD +D  ++  RI+PWV KK+  ++GEE+ S   FICDQ+    TP +IL D+A++++E+A+ FV+KMWRLLIY  + ++ G+
Sbjct:  313 FKQM---MLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQKEGKRLKLFLEDYDDEKDDPKYYTSSQFFQRKRDYEREREADQKDRMQEQQEIEELKRQIMEE-AANDESINIEEEARKRHKLKFQEEEAMRKMRADSGSPNPHQPLGQSANGEKSSSEEESDSEKTDVKKEIKDEIKEEPIDVDISEHVDPNTGSSGTNGNFGWKAIGDDSSLNTKINRPIANGNQ------------NQPQIKKEASPIPIAQRLSGVFG-------NDDDEDDVHSKKKLKPFEITREERMQVMSAEEKRELTKQIIKTIPATKDELFVHRIEWDQLDGKWMNDRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQATPQEILKDVAVIIDEDAEQFVIKMWRLLIYEGQARRLGI 706

HSP 2 Score: 105.916 bits (263), Expect = 2.666e-23
Identity = 51/126 (40.48%), Postives = 83/126 (65.87%), Query Frame = 1 
Query:  160 VIIPKPQLPTTVSNAETNQKFSSFERPITT-VFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDR 534
            ++  + ++P   + A+     SS ++P ++ VF+GNIS+K SD  ++ +L +CGNV SWKR++G++GKLQ FGFC + + E TLR +R+L++F + DK L VK D K  + L      ++ AIE+R
Sbjct:   22 IVFGQMRMPGQHTPAQQ----SSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKVRDDL------RKNAIENR 137
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Celegans
Match: rbm-25 (RNA Binding Motif protein homolog [Source:UniProtKB/TrEMBL;Acc:H2L2D0])

HSP 1 Score: 153.295 bits (386), Expect = 1.687e-38
Identity = 118/417 (28.30%), Postives = 208/417 (49.88%), Query Frame = 1 
Query: 1123 FKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQ-------KRLKFDFDS----MPL-------------------------VSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTER---------KLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            FKQ+   + DK+ AY  RL+ WE+RE++  K YE E+ +   ++  + +E ++L++F EDYDDEK D KYY  ++  +R      E  AD++DRM+E ++IE  ++++++E   N E+I +  E   +  L+       ++++ D  S     PL                         + D+ K   I ++ +  ++ ++  + + GN     I D    NT  +  + + N+            +Q  +     P+ +  + +           N +D + ++ K       I   ER         + L K+II  IP  K +LF + IEWD +D  ++  RI+PWV KK+  ++GEE+ S   FICDQ+    TP +IL D+A++++E+A+ FV+KMWRLLIY  + ++ G+
Sbjct:  313 FKQM---MLDKKQAYLARLKRWESRERQMSKRYEREERKEKDRKKTLQKEGKRLKLFLEDYDDEKDDPKYYTSSQFFQRKRDYEREREADQKDRMQEQQEIEELKRQIMEE-AANDESINIEEEARKRHKLKFQEEEAMRKMRADSGSPNPHQPLGQSANGEKSSSEEESDSEKTDVKKEIKDEIKEEPIDVDISEHVDPNTGSSGTNGNFGWKAIGDDSSLNTKINRPIANGNQ------------NQPQIKKEASPIPIAQRLSGVFG-------NDDDEDDVHSKKKLKPFEITREERMQVMSAEEKRELTKQIIKTIPATKDELFVHRIEWDQLDGKWMNDRIRPWVAKKVTQFLGEEDKSFCDFICDQIEKQATPQEILKDVAVIIDEDAEQFVIKMWRLLIYEGQARRLGI 706

HSP 2 Score: 105.916 bits (263), Expect = 2.666e-23
Identity = 51/126 (40.48%), Postives = 83/126 (65.87%), Query Frame = 1 
Query:  160 VIIPKPQLPTTVSNAETNQKFSSFERPITT-VFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDR 534
            ++  + ++P   + A+     SS ++P ++ VF+GNIS+K SD  ++ +L +CGNV SWKR++G++GKLQ FGFC + + E TLR +R+L++F + DK L VK D K  + L      ++ AIE+R
Sbjct:   22 IVFGQMRMPGQHTPAQQ----SSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKPDEKVRDDL------RKNAIENR 137
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Fly
Match: CG4119 (gene:FBgn0028474 transcript:FBtr0340463)

HSP 1 Score: 129.798 bits (325), Expect = 1.639e-30
Identity = 61/123 (49.59%), Postives = 86/123 (69.92%), Query Frame = 1 
Query: 1870 NHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            N K   +G  + + E++  +K IID IPT K +LF Y ++ + ID   +E +I+PW++KKI+ YIGE EP+L  FIC +VL    P  IL D+ MVL+EEA+VFV+KMWRLLIY ++ KK+GL
Sbjct:  874 NIKKDENGAKV-YDEKRRHIKSIIDRIPTQKEELFNYKLDRNEIDSGLMERKIRPWINKKIIEYIGEPEPTLVDFICSKVLAGSPPQSILDDVQMVLDEEAEVFVVKMWRLLIYELDAKKSGL 995

HSP 2 Score: 99.7525 bits (247), Expect = 3.873e-21
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1 
Query:  229 FERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYK 504
            F  PI TVF+GNISE++ ++L+K +L  CG V++WKRV         FGFCE+D P A +R +RLL++  I  K LV KVD K   L+ DYK
Sbjct:   56 FRGPIITVFVGNISERVPEALLKRILNACGVVINWKRVS-------TFGFCEFDGPIAAMRAVRLLSEMEIDGKKLVAKVDAKNKVLIEDYK 140

HSP 3 Score: 60.8474 bits (146), Expect = 4.405e-9
Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 1 
Query: 1126 KQLEKKLRDKEA----------AYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRG 1341
            K++E +LRD++           AYQ RL  WE REK++ K+ E  + + + ++ E   +A++L+ F EDYDDE+ DS YYRG
Sbjct:  433 KEMEDELRDRKKAEKKAREKEIAYQTRLTDWEVREKRKAKENEKYRLKELLRQEERETDAKRLKEFVEDYDDERDDSLYYRG 514
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Fly
Match: CG4119 (gene:FBgn0028474 transcript:FBtr0070799)

HSP 1 Score: 129.798 bits (325), Expect = 1.639e-30
Identity = 61/123 (49.59%), Postives = 86/123 (69.92%), Query Frame = 1 
Query: 1870 NHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            N K   +G  + + E++  +K IID IPT K +LF Y ++ + ID   +E +I+PW++KKI+ YIGE EP+L  FIC +VL    P  IL D+ MVL+EEA+VFV+KMWRLLIY ++ KK+GL
Sbjct:  874 NIKKDENGAKV-YDEKRRHIKSIIDRIPTQKEELFNYKLDRNEIDSGLMERKIRPWINKKIIEYIGEPEPTLVDFICSKVLAGSPPQSILDDVQMVLDEEAEVFVVKMWRLLIYELDAKKSGL 995

HSP 2 Score: 99.7525 bits (247), Expect = 3.873e-21
Identity = 45/92 (48.91%), Postives = 60/92 (65.22%), Query Frame = 1 
Query:  229 FERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYK 504
            F  PI TVF+GNISE++ ++L+K +L  CG V++WKRV         FGFCE+D P A +R +RLL++  I  K LV KVD K   L+ DYK
Sbjct:   56 FRGPIITVFVGNISERVPEALLKRILNACGVVINWKRVS-------TFGFCEFDGPIAAMRAVRLLSEMEIDGKKLVAKVDAKNKVLIEDYK 140

HSP 3 Score: 60.8474 bits (146), Expect = 4.405e-9
Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 1 
Query: 1126 KQLEKKLRDKEA----------AYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRG 1341
            K++E +LRD++           AYQ RL  WE REK++ K+ E  + + + ++ E   +A++L+ F EDYDDE+ DS YYRG
Sbjct:  433 KEMEDELRDRKKAEKKAREKEIAYQTRLTDWEVREKRKAKENEKYRLKELLRQEERETDAKRLKEFVEDYDDERDDSLYYRG 514
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Fly
Match: CstF64 (gene:FBgn0027841 transcript:FBtr0083660)

HSP 1 Score: 62.7734 bits (151), Expect = 6.242e-10
Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = 1 
Query:  202 AETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRV-QGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
            A+  Q+ S  ++ + +VF+GNI  + ++  +K++ ++ G VLS K V    SGK + FGFCEY + E  L  +R LN + I  +TL V
Sbjct:    2 ADKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMRNLNGYEIGGRTLRV 89
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Zebrafish
Match: rbm25a (RNA binding motif protein 25a [Source:ZFIN;Acc:ZDB-GENE-090312-142])

HSP 1 Score: 166.777 bits (421), Expect = 1.590e-44
Identity = 133/400 (33.25%), Postives = 218/400 (54.50%), Query Frame = 1 
Query: 1129 QLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFD----------------FDSMPLVSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRIN----------HKSAHS--GTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            +LE+KLR+KE AYQ+RL+ WE RE+K+ +DY  E ER   ++ E+ +EA++L+ F EDYDD++ D KYYRG+ L++RL  R  E   DERDR +E +++E  RQ+LL E +P+ +A + R+E+  ++  +  LK +                 +  P +    +P   A   ++   N++   ++PG+ +    +     + ++ H+     E++     S    S K      +  +      V S   +  E+ VE   +             + A S  G  +   +RK  +K +I+ IPT+K +LF YP++W+ +D + ++ RI+PW++KKI+ YIGEEE +L  F+C +V         +   A VL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:   36 KLERKLREKEVAYQERLKNWEIRERKKSRDYSKETEREDERQREMTKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMELDERDRKREKDELEEIRQRLLAEGHPDPDAELQRIEEEAEKRQKAPLKQEQMEEEEEEEEEKEDDDREVKPCLKPTLRPVTAAASVSSASGNATP--LTPGSES---PHGTASPHENSTHEAPPTEELRPKIGLSLKLGSPKMAPTGRRKAL----AAVDSVFNKFEEEEVETAPKKRKLVPLDYSEEERGALSLDGAEVTEEKRKH-IKSLIEKIPTVKQELFNYPLDWNMVDTTLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKV--------CVCASASVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 417
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Zebrafish
Match: rbm25b (RNA binding motif protein 25b [Source:ZFIN;Acc:ZDB-GENE-030131-5547])

HSP 1 Score: 144.436 bits (363), Expect = 4.164e-35
Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = 1 
Query: 1867 INHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            ++  +   G  +   E++  +K +I+ IPT K +LF YP++W  +D + +E RI+PW++KKIV YIGEEE +L  F+C +V+ H TP  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  705 VDGATVAGGKGVNTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDTALMEKRIRPWINKKIVEYIGEEEATLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLGK 830

HSP 2 Score: 134.806 bits (338), Expect = 4.571e-32
Identity = 81/189 (42.86%), Postives = 119/189 (62.96%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSXXXXXXXX-XXXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL++  + +K L+VKVD KT   L ++K KK+       A    + ++  +E   ++       D+     I  +I+E  S+L    ++ +  ++ +K +     +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHELQVGEKKLLVKVDAKTKAQLDEWKAKKKST----SANGNGKADDAGEEEEEVLDEETKKRDQIVKGAIDGLIREYSSELNAQSQDDESSRRKKKREKKDEDDINAMEMEDDKRDLISREINKFR 269

HSP 3 Score: 70.8626 bits (172), Expect = 4.861e-12
Identity = 62/123 (50.41%), Postives = 90/123 (73.17%), Query Frame = 1 
Query: 1129 QLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQ 1497
            +LE+KLR+KEAAYQ+RL+ WE RE+K+ +DY  E ER   +  E+A+E ++L+ F EDYDD++ D KYYRG+ L++RL  R  E   DERDR +E E++E  RQ+LL E +P+ +A + RME+
Sbjct:  389 KLERKLREKEAAYQERLKNWELRERKKARDYSKEIEREEERRREMAKEGKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEIELDERDRKREKEELEEIRQRLLAEGHPDPDAELRRMEE 511
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Zebrafish
Match: rbm25a (RNA binding motif protein 25a [Source:ZFIN;Acc:ZDB-GENE-090312-142])

HSP 1 Score: 126.331 bits (316), Expect = 5.587e-33
Identity = 57/90 (63.33%), Postives = 71/90 (78.89%), Query Frame = 1 
Query:  250 VFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQK 519
            VF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL++  + DK L+VKVD KT   L  +K  +++
Sbjct:   87 VFVGNISEKASDMLVRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHELQLGDKKLLVKVDAKTKAQLETWKASQRR 176
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Zebrafish
Match: rbm25b (RNA binding motif protein 25b [Source:ZFIN;Acc:ZDB-GENE-030131-5547])

HSP 1 Score: 135.576 bits (340), Expect = 2.153e-32
Identity = 81/189 (42.86%), Postives = 119/189 (62.96%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSXXXXXXXX-XXXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL++  + +K L+VKVD KT   L ++K KK+       A    + ++  +E   ++       D+     I  +I+E  S+L    ++ +  ++ +K +     +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHELQVGEKKLLVKVDAKTKAQLDEWKAKKKST----SANGNGKADDAGEEEEEVLDEETKKRDQIVKGAIDGLIREYSSELNAQSQDDESSRRKKKREKKDEDDINAMEMEDDKRDLISREINKFR 269

HSP 2 Score: 71.633 bits (174), Expect = 2.391e-12
Identity = 62/123 (50.41%), Postives = 90/123 (73.17%), Query Frame = 1 
Query: 1129 QLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQ 1497
            +LE+KLR+KEAAYQ+RL+ WE RE+K+ +DY  E ER   +  E+A+E ++L+ F EDYDD++ D KYYRG+ L++RL  R  E   DERDR +E E++E  RQ+LL E +P+ +A + RME+
Sbjct:  389 KLERKLREKEAAYQERLKNWELRERKKARDYSKEIEREEERRREMAKEGKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEIELDERDRKREKEELEEIRQRLLAEGHPDPDAELRRMEE 511
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Zebrafish
Match: rbm25a (RNA binding motif protein 25a [Source:ZFIN;Acc:ZDB-GENE-090312-142])

HSP 1 Score: 105.145 bits (261), Expect = 8.939e-27
Identity = 46/79 (58.23%), Postives = 63/79 (79.75%), Query Frame = 1 
Query: 2008 SFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            + ++ RI+PW++KKI+ YIGEEE +L  F+C +V+ H TP+ IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:    2 TLMDRRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPEGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 80
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Xenopus
Match: rbm25 (RNA binding motif protein 25 [Source:NCBI gene;Acc:407928])

HSP 1 Score: 140.584 bits (353), Expect = 4.599e-34
Identity = 60/111 (54.05%), Postives = 85/111 (76.58%), Query Frame = 1 
Query: 1912 ERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            E++  +K +I+ IPT K +LFAYP++W  +D + +E RI+PW++KKI+ YIGEEE +L  F+C +V+ H +P  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  527 EKRKHIKSLIEKIPTAKPELFAYPLDWSIVDTTLMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 637

HSP 2 Score: 134.42 bits (337), Expect = 3.845e-32
Identity = 89/195 (45.64%), Postives = 123/195 (63.08%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQ----KAIEDREAEDVTRTEEEKKERINLIYAREADEDRNAL-TQIKKIIKEAGSXXXXXXXXXXXXXXXXXXXVKGL--NIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K  K+     A  +  A+D    +E+ K R  +I        + A+   IK+   E  +    +D   ++KK +K + +  L  +I+ ++++ DK +LISREI  FR
Sbjct:   51 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKASKRASNGSAKPESAADDEDDVDEDTKRRDGII--------KGAIEVLIKEYSSELNAPSQDSDSHPRKKKKDKKEEIVQLQEDINAIEMEEDKRDLISREISKFR 237
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Xenopus
Match: rbm25 (RNA binding motif protein 25 [Source:NCBI gene;Acc:407928])

HSP 1 Score: 141.354 bits (355), Expect = 5.247e-34
Identity = 60/111 (54.05%), Postives = 85/111 (76.58%), Query Frame = 1 
Query: 1912 ERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            E++  +K +I+ IPT K +LFAYP++W  +D + +E RI+PW++KKI+ YIGEEE +L  F+C +V+ H +P  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  659 EKRKHIKSLIEKIPTAKPELFAYPLDWSIVDTTLMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 769

HSP 2 Score: 135.961 bits (341), Expect = 2.302e-32
Identity = 62/93 (66.67%), Postives = 74/93 (79.57%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQ 516
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K  K+
Sbjct:   42 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKASKR 134

HSP 3 Score: 66.6254 bits (161), Expect = 1.115e-10
Identity = 60/116 (51.72%), Postives = 87/116 (75.00%), Query Frame = 1 
Query: 1129 QLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEA 1476
            +LE+KLR+KEAAYQ+RL+ WE RE+K+ ++YE + ER   +  E A+EA++L+ F EDYDD++ D KYYRG+ L++RL  R  E  ADERDR +E E++E  RQ+LL E +P+ +A
Sbjct:  371 KLERKLREKEAAYQERLKNWEIRERKKAREYEKDAEREEERRRETAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDA 486
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Xenopus
Match: rbm25 (RNA binding motif protein 25 [Source:NCBI gene;Acc:407928])

HSP 1 Score: 140.198 bits (352), Expect = 6.025e-34
Identity = 60/111 (54.05%), Postives = 85/111 (76.58%), Query Frame = 1 
Query: 1912 ERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            E++  +K +I+ IPT K +LFAYP++W  +D + +E RI+PW++KKI+ YIGEEE +L  F+C +V+ H +P  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  566 EKRKHIKSLIEKIPTAKPELFAYPLDWSIVDTTLMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 676

HSP 2 Score: 134.42 bits (337), Expect = 4.890e-32
Identity = 62/95 (65.26%), Postives = 75/95 (78.95%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKA 522
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K  K+ +
Sbjct:   83 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKASKRAS 177
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Xenopus
Match: mcm3ap (minichromosome maintenance complex component 3 associated protein [Source:Xenbase;Acc:XB-GENE-981006])

HSP 1 Score: 56.9954 bits (136), Expect = 9.709e-8
Identity = 29/88 (32.95%), Postives = 51/88 (57.95%), Query Frame = 1 
Query:  202 AETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQG-ASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
            A  N +  + +R + +VF+GNI  + ++  +KD+ ++ G V+S++ V    +GK + +GFCEY + E  L  +R LN    S + L V
Sbjct:    2 AGLNVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Xenopus
Match: mcm3ap (minichromosome maintenance complex component 3 associated protein [Source:Xenbase;Acc:XB-GENE-981006])

HSP 1 Score: 56.9954 bits (136), Expect = 1.021e-7
Identity = 29/88 (32.95%), Postives = 51/88 (57.95%), Query Frame = 1 
Query:  202 AETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQG-ASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
            A  N +  + +R + +VF+GNI  + ++  +KD+ ++ G V+S++ V    +GK + +GFCEY + E  L  +R LN    S + L V
Sbjct:    2 AGLNVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Mouse
Match: Rbm25 (RNA binding motif protein 25 [Source:MGI Symbol;Acc:MGI:1914289])

HSP 1 Score: 139.043 bits (349), Expect = 3.074e-37
Identity = 70/110 (63.64%), Postives = 83/110 (75.45%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEE 567
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK KA  +   E VT  +EE
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKK-KANGNARPETVTNDDEE 193
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Mouse
Match: Rbm25 (RNA binding motif protein 25 [Source:MGI Symbol;Acc:MGI:1914289])

HSP 1 Score: 140.969 bits (354), Expect = 1.348e-34
Identity = 96/207 (46.38%), Postives = 123/207 (59.42%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTR-----TEEEKKERINLIYA------READEDRNALTQIKKIIKEAGSXXXXXXXXXXXXXXXXXXXVKGL--------NIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK KA  +   E VT       +EE K R  +I        RE   + NA +Q      E+ S      KEKKE    +  +   +        +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKK-KANGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQ------ESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFR 284

HSP 2 Score: 63.5438 bits (153), Expect = 7.943e-10
Identity = 67/135 (49.63%), Postives = 99/135 (73.33%), Query Frame = 1 
Query: 1126 KQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLK 1530
            ++LE+KLR+KEAAYQ+RL+ WE RE+K+ ++YE E ER   +  E+A+EA++L+ F EDYDD++ D KYYRG+ L++RL  R  E  ADERDR +E E++E  RQ+LL E +P+ +A + RMEQ  +   Q ++K
Sbjct:  439 RKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIK 573
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Mouse
Match: Rbm25 (RNA binding motif protein 25 [Source:MGI Symbol;Acc:MGI:1914289])

HSP 1 Score: 140.198 bits (352), Expect = 8.693e-34
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1 
Query: 1876 KSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            K+A  GT +   E++  +K +I+ IPT K +LFAYP++W  +D   +E RI+PW++KKI+ YIGEEE +L  F+C +V+ H +P  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  717 KNATKGT-VNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 838

HSP 2 Score: 140.198 bits (352), Expect = 8.926e-34
Identity = 98/207 (47.34%), Postives = 123/207 (59.42%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTR-----TEEEKKERINLIYA------READEDRNALTQIKKIIKEAGSXXXXXXXXXXX--------XXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK KA  +   E VT       +EE K R  +I        RE   + NA +Q      E+ S      KEKKE          L    L+   +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKK-KANGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQ------ESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFR 284
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Mouse
Match: Rbm25 (RNA binding motif protein 25 [Source:MGI Symbol;Acc:MGI:1914289])

HSP 1 Score: 117.087 bits (292), Expect = 8.356e-30
Identity = 52/71 (73.24%), Postives = 60/71 (84.51%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDK 450
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K
Sbjct:  104 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEK 174
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Mouse
Match: Pabpc4l (poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087])

HSP 1 Score: 56.6102 bits (135), Expect = 6.358e-8
Identity = 40/122 (32.79%), Postives = 63/122 (51.64%), Query Frame = 1 
Query:  241 ITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREA 606
             T V+I N  + + D  +++V +K G  LS K ++ A+GK + FGF  +D+ EA    +  +N   I+ +T+ V              G+ QK +E R+AE     E+ KKERI    AR+A
Sbjct:  189 FTNVYIKNFGDDVDDEKLREVFSKYGQTLSVKVMKDATGKSKGFGFVSFDSHEAAKNAVEDMNGQDINGQTIFV--------------GRAQKKVE-RQAELKEMFEQMKKERIR---ARQA 292
[Close]
BLAST of RNA-binding protein 25 vs. UniProt/SwissProt
Match: sp|P49756|RBM25_HUMAN (RNA-binding protein 25 OS=Homo sapiens OX=9606 GN=RBM25 PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 1.611e-33
Identity = 96/207 (46.38%), Postives = 123/207 (59.42%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTR-----TEEEKKERINLIYA------READEDRNALTQIKKIIKEAGSXXXXXXXXXXX--------XXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK+ +  +   E VT       +EE K R  +I        RE   + NA +Q      E+ S      KEKKE          L    L+   +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQ------ESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFR 285

HSP 2 Score: 140.584 bits (353), Expect = 5.489e-33
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1 
Query: 1876 KSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            K+A  GT +   E++  +K +I+ IPT K +LFAYP++W  +D   +E RI+PW++KKI+ YIGEEE +L  F+C +V+ H +P  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  722 KNATKGT-VNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 843
[Close]
BLAST of RNA-binding protein 25 vs. UniProt/SwissProt
Match: sp|B2RY56|RBM25_MOUSE (RNA-binding protein 25 OS=Mus musculus OX=10090 GN=Rbm25 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 6.081e-33
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1 
Query: 1876 KSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            K+A  GT +   E++  +K +I+ IPT K +LFAYP++W  +D   +E RI+PW++KKI+ YIGEEE +L  F+C +V+ H +P  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  717 KNATKGT-VNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 838

HSP 2 Score: 140.198 bits (352), Expect = 6.244e-33
Identity = 98/207 (47.34%), Postives = 123/207 (59.42%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTR-----TEEEKKERINLIYA------READEDRNALTQIKKIIKEAGSXXXXXXXXXXX--------XXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I +K L+VKVD KT   L ++K KK KA  +   E VT       +EE K R  +I        RE   + NA +Q      E+ S      KEKKE          L    L+   +I+ ++++ DK +LISREI  FR
Sbjct:   85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKK-KANGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQ------ESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFR 284
[Close]
BLAST of RNA-binding protein 25 vs. UniProt/SwissProt
Match: sp|Q8WZK0|US107_SCHPO (U1 snRNP-associated protein usp107 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=usp107 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.936e-11
Identity = 33/99 (33.33%), Postives = 59/99 (59.60%), Query Frame = 1 
Query: 1909 TERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLL 2205
             E+   ++ +I+ IP     L+A PI+W  + E  ++  ++ +V KKI+ YIG +E SL  F  D +  HK  +Q+++++ + L E+A  FV K++R L
Sbjct:  587 AEKTKRLRSLIEKIPVEAESLWALPIDWSKVTEDLLKEEMQAFVTKKIIEYIGIQEDSLITFTIDHIRQHKGAEQLVSELDLALAEDAPEFVSKVYRYL 685

HSP 2 Score: 59.3066 bits (142), Expect = 1.011e-7
Identity = 24/64 (37.50%), Postives = 38/64 (59.38%), Query Frame = 1 
Query:  250 VFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAI 441
            +FIGNI +++ D  M  +L   G + SW+RV  A   + +FGF E+++ E   R +  LNDF +
Sbjct:  141 LFIGNIPKELDDFWMDKILRLSGKLASWRRVADADNSMTSFGFAEFESNEQFSRALEALNDFVV 204
[Close]
BLAST of RNA-binding protein 25 vs. UniProt/SwissProt
Match: sp|Q8C7E9|CSTFT_MOUSE (Cleavage stimulation factor subunit 2 tau variant OS=Mus musculus OX=10090 GN=Cstf2t PE=1 SV=2)

HSP 1 Score: 56.9954 bits (136), Expect = 5.261e-7
Identity = 27/80 (33.75%), Postives = 49/80 (61.25%), Query Frame = 1 
Query:  226 SFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQG-ASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
            + +R + +VF+GNI  + ++  +KD+ ++ G+V+S++ V    +GK + +GFCEY + E  L  +R LN    S + L V
Sbjct:   10 AMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
[Close]
BLAST of RNA-binding protein 25 vs. UniProt/SwissProt
Match: sp|Q9H0L4|CSTFT_HUMAN (Cleavage stimulation factor subunit 2 tau variant OS=Homo sapiens OX=9606 GN=CSTF2T PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 7.006e-7
Identity = 27/80 (33.75%), Postives = 49/80 (61.25%), Query Frame = 1 
Query:  226 SFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQG-ASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
            + +R + +VF+GNI  + ++  +KD+ ++ G+V+S++ V    +GK + +GFCEY + E  L  +R LN    S + L V
Sbjct:   10 AMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
[Close]
BLAST of RNA-binding protein 25 vs. TrEMBL
Match: A0A4S2LAD4 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_008612 PE=4 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.316e-81
Identity = 176/411 (42.82%), Postives = 241/411 (58.64%), Query Frame = 1 
Query: 1126 KQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDTKP----------------GFIALESNTIMNNSSS---EAVSPGNSALPV------INDLEISNTSNDHQLCSANE-------VKVNYNDSCMDDSQKGLNDSFKPMI--------LPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            K+LE+KLR+KE +YQKRL+ WE RE+K+  +YE E+E    ++ E+  EA++L+ FFEDYDDE  D KYYRG+ L +RL  R  EE ADERDR KEVEQI++ R+KL+ E +PN E+II +MEQ MQEHL++RL  D  + P+ + D++P                 F+ +++     +S S      SP N+A P           E SN   D    S ++         +N  +S +        +              LPP              N   +   +  +A    +    ER  L+K+II GIPT K ++F+YPI+WD +D +F+ TRIKPWVDKKI+ YIGE E +LS FICDQ+L H  P++IL+DIAMVL+EEA+VFV+KMWRLLIYVI EKKAGL
Sbjct:  310 KKLERKLREKEESYQKRLKQWETRERKKANEYEHEREHEQKRQRELQIEAQRLKEFFEDYDDEVEDPKYYRGSALHQRLKDREVEEAADERDRQKEVEQIDAARRKLIDEKDPNAESIIFQMEQKMQEHLRRRLNID-TTEPVAASDSEPEEQEPISEPVPQSDHRAFVEVQNEPQEKHSESARASPASPSNTADPSGPAQSQFQPTEFSNPPADEASVSLSKDGSSTFLFAMNPAESVVRKKAAAFTEEEPEEKSKKPALSWLPPSAFAAPTTSSEPITNTRSNGLDSMSAAALVANFTSEERNALIKRIIKGIPTAKKEIFSYPIDWDVVDANFITTRIKPWVDKKIIGYIGEAEATLSNFICDQLLHHHPPERILSDIAMVLDEEAEVFVVKMWRLLIYVIAEKKAGL 719

HSP 2 Score: 161.384 bits (407), Expect = 1.681e-37
Identity = 95/216 (43.98%), Postives = 139/216 (64.35%), Query Frame = 1 
Query:  154 APVIIPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSXXXXXXXXXXXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            APV +  P L  T  +     ++   + P+TTVF+GNIS++  D L+K +L +CGN+LSWKRVQGASGKLQAFGFCEY++PE+T+RC+RLLN  A+ DK L+VKVDPKT++LL +YK KK++     E   +  T EE       + +    +D    + ++ I+KE  S L  +D  +K     +    + L ++D+DLD ++ +LI+REIEIFR
Sbjct:   34 APVTVAAPALAVTTQSETPVVQYVREKPPVTTVFVGNISDRAPDQLIKTLLMRCGNILSWKRVQGASGKLQAFGFCEYEDPESTMRCVRLLNGLAVGDKKLLVKVDPKTEDLLNEYKKKKEEKG---EQGKLGATAEE-------VDSSTLRDDEGVKSALEDILKEHESLLDGSDSPRKSDNYSEGP--RHLTMEDMDLDDERKDLINREIEIFR 237
[Close]
BLAST of RNA-binding protein 25 vs. TrEMBL
Match: A0A3R7HBH0 (RNA-binding protein 25 OS=Clonorchis sinensis OX=79923 GN=Rbm25 PE=4 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 3.992e-80
Identity = 175/411 (42.58%), Postives = 241/411 (58.64%), Query Frame = 1 
Query: 1126 KQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDTKP----------------GFIALESNTIMNNSSS---EAVSPGNSALPV------INDLEISNTSNDHQLCSANE-------VKVNYNDSCMDDSQKGLNDSFKPMI--------LPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            K+LE+KLR+KE +YQKRL+ WE RE+K+  +YE E+E    ++ E+  EA++L+ FFEDYDDE  D KYYRG+ L +RL  R  EE ADERDR KEVEQI++ R+KL+ E +PN E+II +MEQ MQEHL++RL  D  + P+ + D++P                 F+ +++     +S S      SP N+A P           E SN   D    S ++         +N  +S +        +              LPP              N   +   +  +A    +    ER  L+K+II GIPT K ++F+YPI+WD +D +F+ TRIKPWVDKKI+ YIGE E +LS FICDQ++ H  P++IL+DIAMVL+EEA+VFV+KMWRLLIYVI EKKAGL
Sbjct:  368 KKLERKLREKEESYQKRLKQWETRERKKANEYEHEREHEQKRQRELQIEAQRLKEFFEDYDDEIEDPKYYRGSALHQRLKDREVEEAADERDRQKEVEQIDAARRKLIDEKDPNAESIIFQMEQKMQEHLRRRLNID-TTEPVAASDSEPEGQEPISQTVPQSDHRAFVEVQNEPQEKHSESARASPASPSNTADPSGPAQSQFQPTEFSNPPADEASVSLSKDGSSTFLFAMNTAESVVRKKAAAFTEEEPEEKSKKPALSWLPPSAFAAPTTSSEPITNTRSNGLDSMSAAALVANFTSEERNALIKRIIKGIPTAKKEIFSYPIDWDVVDANFINTRIKPWVDKKIIGYIGEAEATLSNFICDQLVHHHPPERILSDIAMVLDEEAEVFVVKMWRLLIYVIAEKKAGL 777

HSP 2 Score: 162.155 bits (409), Expect = 1.537e-37
Identity = 95/223 (42.60%), Postives = 142/223 (63.68%), Query Frame = 1 
Query:  154 APVIIPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKK----IIKEAGSXXXXXXXXXXXXXXXXXXXVKG---LNIDDVDLDGDKNNLISREIEIFR 801
            APV +  P L  T  +     ++   + P+TTVF+GNIS++  D L+K +L +CGN+LSWKRVQGASGKLQAFGFCEY++PE+T+RC+RLLN  A+ DK L+VKVDPKT++LL +    K+K  E  E   +  T EE    ++    R+ +  ++AL  I K    ++  +GS L  +     +   + ++  +G   L ++D+DLD ++ +LI+REIEIFR
Sbjct:   80 APVTVAAPALAVTTQSETPVVQYVREKPPVTTVFVGNISDRAPDQLIKTLLMRCGNILSWKRVQGASGKLQAFGFCEYEDPESTMRCVRLLNGLAVGDKKLLVKVDPKTEDLLNE---YKKKKEEKGEQGKLGATAEE----VDSSTLRDDEGVKSALEDILKEHESLLDGSGSSLPFSVLRTSDSPRKSDNYSEGPRHLTMEDMDLDDERKDLINREIEIFR 295
[Close]
BLAST of RNA-binding protein 25 vs. TrEMBL
Match: A0A4Z2D2V0 (RNA-binding protein OS=Schistosoma japonicum OX=6182 GN=EWB00_005307 PE=4 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.428e-75
Identity = 180/396 (45.45%), Postives = 245/396 (61.87%), Query Frame = 1 
Query: 1126 KQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFD----------------SMPLVSDDTKPGFIALES--NTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVK-------VNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            K+LEKKLR+KE +YQKRL+ WE RE+K+  +YE E+E    ++ E+  EA++L+ FFEDYDD   D KYYRG+ L +RL  R  EE ADERDR KE+EQ+E+ R+KL++E +PN E+II +MEQ MQEHL K L  D D                ++ +  D++K     ++S  N+ ++ + +  +S    A P    + +    ++  L S + V+         + D   DD  K    S+    LPP     ++    S       N  N+    S  S    E+K ++K+II+GIPT K +LFAYPI+WD +D  FV +RIKPWVDKKIV+YIGE E +LS FICDQVL H  P++ILADIAMVL+EEA+VFV+KMWRLLIYVI EKKAGL
Sbjct:  330 KRLEKKLREKEESYQKRLKQWEIRERKKANEYEHEREHERKRQRELQIEAQRLKEFFEDYDDNVEDPKYYRGSALHQRLKDREIEEAADERDRQKEIEQLETARRKLIEEGDPNAESIIFQMEQKMQEHLIKCLLVDGDMSIGSVDNQCPEPVSENLLITEDESKNTECMVKSDENSNLSPACNGIISEFEPAAPEETTVSLLKDGSNTFLFSMSTVEPVVRKTASAFTDEEQDDKPKKHGLSW----LPPSALKANSISNPSNGANSTQNDSNNLPPVSALST--EEKKAIIKRIIEGIPTHKRELFAYPIDWDMVDADFVNSRIKPWVDKKIVSYIGEAEATLSSFICDQVLRHNPPERILADIAMVLDEEAEVFVVKMWRLLIYVIAEKKAGL 719

HSP 2 Score: 169.859 bits (429), Expect = 2.777e-40
Identity = 96/214 (44.86%), Postives = 135/214 (63.08%), Query Frame = 1 
Query:  166 IPKPQL--PTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSXXXXXXXXXXXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            IP P +  P   + AET Q +   + P+TTVF+GNI+E   D L+K +L +CGN+LSWKRVQGASGKLQAFGFCEY++PE+T+RC+RLLN F +  K L+VKVDPKT++LL +Y+ KK+K  E+          ++  +R          +D    T ++ IIKE  + L      KK+    +    + L I+D+DLD D+ +LI+REIE FR
Sbjct:   41 IPPPNVAAPVVTTVAET-QFYVREKPPVTTVFVGNIAECAPDQLIKTLLMRCGNILSWKRVQGASGKLQAFGFCEYEDPESTMRCVRLLNGFKVGPKPLLVKVDPKTEDLLNEYRKKKEKVGEEGTLGATPDEIDQSTQR----------DDETVKTALENIIKENAAMLEEEGGAKKQDLHMEGP--RHLTIEDMDLDNDRKDLINREIESFR 241
[Close]
BLAST of RNA-binding protein 25 vs. TrEMBL
Match: A0A183K8W0 (PWI domain-containing protein OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS11441 PE=4 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 4.626e-74
Identity = 172/390 (44.10%), Postives = 238/390 (61.03%), Query Frame = 1 
Query: 1165 YQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDTKPGFIA-------------------LESNTI---MNNSSSE--AVSPGNSALPVINDLEISNTSNDHQLC-SANEVKVNYNDSCMDDSQK-------GLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            YQKRL+ WE RE+K+  +YE E++    ++ E+  EA++L+ FFEDYDD   D KYYRG+ L +RL  R  EE ADERDR KE+EQ+E+ R+KL++E +PN E+II +MEQ MQEHL++ L  + D     SD+  P  ++                   LE+N +    N  +SE    +P  +++ ++ D      SN      SA E  V    S   D ++       GL+       LPP     ++    S  N  D N+ +  +    +++   E+K ++K+II+GIPT K +LFAYPI+WD +D  FV +RIKPWVDKKIV+YIGE E +LS FICDQ+L H  P++ILADIAMVL+EEA+VFV+KMWRLLIYVI EKKAGL
Sbjct:  250 YQKRLKQWEIRERKKANEYEHERDHERKRQRELQIEAQRLKEFFEDYDDNVEDPKYYRGSALHQRLKDREIEEAADERDRQKEIEQLETARRKLIEEGDPNAESIIFQMEQKMQEHLRRCLLVNGDMSIESSDNQCPEPVSENLPSAEDESKNLECVVKSLETNNLSPACNGVTSEFEPAAPEETSVSLLKD-----GSNTFLFSMSAVEPVVRKTASAFADEEQDEKPKKHGLS------WLPPSALKANSISNPS--NGGDSNQNDSNNLPPVSALSTEEKKAIIKRIIEGIPTHKRELFAYPIDWDMVDADFVNSRIKPWVDKKIVSYIGEAEATLSSFICDQLLHHNPPERILADIAMVLDEEAEVFVVKMWRLLIYVIAEKKAGL 626
[Close]
BLAST of RNA-binding protein 25 vs. TrEMBL
Match: G4V9Z2 (Putative rna binding motif protein 25 OS=Schistosoma mansoni OX=6183 GN=Smp_078610 PE=4 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.538e-73
Identity = 173/390 (44.36%), Postives = 239/390 (61.28%), Query Frame = 1 
Query: 1165 YQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFD----------------SMPLVSDDTKPGFIA---LESNTI---MNNSSSE--AVSPGNSALPVINDLEISNTSNDHQLC-SANEVKVNYNDSCMDDSQK-------GLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            YQKRL+ WE RE+K+  +YE E++    ++ E+  EA++L+ FFEDYDD   D KYYRG+ L +RL  R  EE ADERDR KE+EQ+E+ R+KL++E +PN E+II +MEQ MQEHL++ L  + D                ++P   D++K    A   LE+N +    N  +SE    +P  + + ++ D      SN      SA E  V    S   D ++       GL+       LPP     ++    S  N  D N+ +  +    +++   E+K ++K+II+GIPT K +LFAYPI+WD +D  FV +RIKPWVDKKIV+YIGE E +LS FICDQ+L H  P++ILADIAMVL+EEA+VFV+KMWRLLIYVI EKKAGL
Sbjct:  319 YQKRLKQWEIRERKKANEYEHERDHERKRQRELQIEAQRLKEFFEDYDDNVEDPKYYRGSALHQRLKDREIEEAADERDRQKEIEQLETARRKLIEEGDPNAESIIFQMEQKMQEHLRRCLLVNGDMSIEPDDNQCPEPVSENLPSAEDESKNPECAVKSLETNNLSPACNGVASEFEPAAPEETTISLLKD-----GSNTFLFSMSAVEPVVRKTASAFADEEQDEKPKKHGLS------WLPPSALKANSITNPS--NGGDSNQNDSNNLPPVSALSTEEKKAIIKRIIEGIPTHKRELFAYPIDWDMVDADFVNSRIKPWVDKKIVSYIGEAEATLSSFICDQLLHHNPPERILADIAMVLDEEAEVFVVKMWRLLIYVIAEKKAGL 695

HSP 2 Score: 169.474 bits (428), Expect = 2.998e-40
Identity = 95/215 (44.19%), Postives = 139/215 (64.65%), Query Frame = 1 
Query:  163 IIPKPQL--PTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSXXXXXXXXXXXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            IIP P +  P   + AET   +   + P+TTVF+GNI+E   D L+K +L +CGN+LSWKRVQGASGKLQAFGFCEY++PE+T+RC+RLLN F +  K L+VKVDPKT++LL++Y+ KK+K  E+      +   ++  +R          +D    T ++ IIKE  ++    D+   +K+    +  + L I+D+DLD D+ +LI+REIE FR
Sbjct:   17 IIPPPNVAAPVVPTVAET-PIYVREKPPVTTVFVGNIAECAPDQLIKTLLMRCGNILSWKRVQGASGKLQAFGFCEYEDPESTMRCVRLLNGFKVGPKALLVKVDPKTEDLLSEYRKKKEKVGEEGTLGATSDEIDQSTQR----------DDETVKTALENIIKE--NEAMLEDEGAVKKQDLHMEGPRHLTIEDMDLDNDRKDLINREIESFR 218
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Cavefish
Match: rbm25b (RNA binding motif protein 25b [Source:ZFIN;Acc:ZDB-GENE-030131-5547])

HSP 1 Score: 142.124 bits (357), Expect = 1.881e-34
Identity = 61/111 (54.95%), Postives = 84/111 (75.68%), Query Frame = 1 
Query: 1912 ERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            E++  +K +I+ IPT K +LF YP++W  +D + +E RI+PW++KKIV YIGEEE +L  F+C +V+ H TP  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  705 EKRKHIKSLIEKIPTAKPELFNYPLDWSVVDTTLMEKRIRPWINKKIVEYIGEEEATLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLGK 815

HSP 2 Score: 126.716 bits (317), Expect = 1.589e-29
Identity = 67/129 (51.94%), Postives = 89/129 (68.99%), Query Frame = 1 
Query:  148 TAAPVI--IPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLA--KCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKA 522
            T+ PV+  +  P+     S A+ N + S    P TTVF+GNISEK SD L++ +L+  KCG VLSWKRVQGASGKLQ FGFCEY  PE+TLR +RLL++  + +K L+VKVD KT   L ++K KK+ +
Sbjct:   56 TSVPVVSKVAAPRKEAPASRAKENDENSG---PTTTVFVGNISEKASDMLIRQLLSSQKCGLVLSWKRVQGASGKLQ-FGFCEYKEPESTLRALRLLHELQVGEKKLLVKVDAKTKAQLDEWKAKKRSS 180

HSP 3 Score: 62.7734 bits (151), Expect = 1.048e-9
Identity = 61/123 (49.59%), Postives = 88/123 (71.54%), Query Frame = 1 
Query: 1129 QLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQ 1497
            +LE+KLR+KEAAYQ+RL+ WE RE+K+ +DY  E ER   +  E A+E ++L+ F EDYDD++ D KYY G+ L++RL  R  E   DERDR +E E++E  RQ+LL E +P+ +A + RME+
Sbjct:  390 KLERKLREKEAAYQERLKNWELRERKKARDYAKEAEREDERRRETAKEGKRLKEFLEDYDDDRDDPKYY-GSALQKRLRDREKEIELDERDRKREKEELEEIRQRLLAEGHPDPDAELRRMEE 511
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Cavefish
Match: rbm25b (RNA binding motif protein 25b [Source:ZFIN;Acc:ZDB-GENE-030131-5547])

HSP 1 Score: 141.354 bits (355), Expect = 3.304e-34
Identity = 61/111 (54.95%), Postives = 84/111 (75.68%), Query Frame = 1 
Query: 1912 ERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            E++  +K +I+ IPT K +LF YP++W  +D + +E RI+PW++KKIV YIGEEE +L  F+C +V+ H TP  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:  698 EKRKHIKSLIEKIPTAKPELFNYPLDWSVVDTTLMEKRIRPWINKKIVEYIGEEEATLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLGK 808

HSP 2 Score: 136.346 bits (342), Expect = 1.158e-32
Identity = 68/127 (53.54%), Postives = 90/127 (70.87%), Query Frame = 1 
Query:  148 TAAPVI--IPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKA 522
            T+ PV+  +  P+     S A+ N + S    P TTVF+GNISEK SD L++ +L+KCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL++  + +K L+VKVD KT   L ++K KK+ +
Sbjct:   57 TSVPVVSKVAAPRKEAPASRAKENDENSG---PTTTVFVGNISEKASDMLIRQLLSKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHELQVGEKKLLVKVDAKTKAQLDEWKAKKRSS 180
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Cavefish
Match: cstf2 (cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:103042269])

HSP 1 Score: 55.0694 bits (131), Expect = 2.084e-7
Identity = 27/81 (33.33%), Postives = 48/81 (59.26%), Query Frame = 1 
Query:  223 SSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQG-ASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
             + +R + +VF+GNI  + ++  +KD+ ++ G V+S++ V    +GK + +GFCEY + E  L  +R LN    S + L V
Sbjct:   16 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 96
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Cavefish
Match: cstf2 (cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:103042269])

HSP 1 Score: 55.0694 bits (131), Expect = 2.283e-7
Identity = 27/81 (33.33%), Postives = 48/81 (59.26%), Query Frame = 1 
Query:  223 SSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQG-ASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
             + +R + +VF+GNI  + ++  +KD+ ++ G V+S++ V    +GK + +GFCEY + E  L  +R LN    S + L V
Sbjct:   16 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 96
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Cavefish
Match: cstf2 (cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:103042269])

HSP 1 Score: 55.0694 bits (131), Expect = 2.324e-7
Identity = 27/81 (33.33%), Postives = 48/81 (59.26%), Query Frame = 1 
Query:  223 SSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQG-ASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
             + +R + +VF+GNI  + ++  +KD+ ++ G V+S++ V    +GK + +GFCEY + E  L  +R LN    S + L V
Sbjct:   16 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 96
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004295.1 (pep scaffold:Pmarinus_7.0:GL477124:56243:73234:1 gene:ENSPMAG00000003899.1 transcript:ENSPMAT00000004295.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 139.043 bits (349), Expect = 3.514e-34
Identity = 60/111 (54.05%), Postives = 85/111 (76.58%), Query Frame = 1 
Query: 1912 ERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            E++  +K +I+ IPT K +LFAY ++W  +D + +E R+KPW++KKI+ YIGEEEP+L +FIC ++L H  P  IL D++MVL++EA+VFV+KMWRLLIY  E KK GL K
Sbjct:  738 EKRKHIKSLIEKIPTAKPELFAYTLDWTMVDSTLMERRVKPWINKKIIEYIGEEEPTLVEFICTKILAHSAPQSILDDVSMVLDDEAEVFVVKMWRLLIYETEAKKFGLVK 848

HSP 2 Score: 134.035 bits (336), Expect = 1.622e-32
Identity = 64/122 (52.46%), Postives = 85/122 (69.67%), Query Frame = 1 
Query:  160 VIIPKPQ---LPTTVSNAETNQKFSS-FERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKK 513
            V++P P    LP     A   ++ +  +  P TTVF+GNI++K SD L++ +LAKCG V++WKRVQGASGK QAFGFCEY  P ++LR IRLL+DF + DK L+VKVD KT   L ++K KK
Sbjct:   59 VLLPTPNIPALPVKPLMARVRERPAEEYNGPTTTVFVGNITDKASDVLIRQMLAKCGTVVTWKRVQGASGKQQAFGFCEYSEPASSLRAIRLLHDFQLGDKKLLVKVDAKTKAQLEEWKAKK 180

HSP 3 Score: 51.9878 bits (123), Expect = 5.226e-7
Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 1 
Query: 1159 AAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRG 1341
            AAYQ+RL+ WEAREKK+ +DYE E ER   +  E+A+EA++L+ F EDYDD++ D KYY+G
Sbjct:  402 AAYQERLKNWEAREKKKARDYEKEMEREAERRREMAKEAKRLKEFLEDYDDDRDDPKYYKG 462
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009751.1 (pep scaffold:Pmarinus_7.0:GL485909:19:7776:-1 gene:ENSPMAG00000008808.1 transcript:ENSPMAT00000009751.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 97.8265 bits (242), Expect = 7.349e-22
Identity = 65/168 (38.69%), Postives = 96/168 (57.14%), Query Frame = 1 
Query:  301 VLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYA-READEDRNALTQIKKIIKEAGSXXXXXXXXXXXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            ++ KCG VL+WKRVQG SGKLQAFGFCEY  P ++LR +RLL+D  + D+ L+VKVD KT  LL  +K ++Q +                 + ++L  A R  DE      +I+ +I+E  S L+         +  +    K  ++D++D++ DK +LISREI  FR
Sbjct:    3 LVQKCGTVLNWKRVQGPSGKLQAFGFCEYREPGSSLRALRLLHDLELGDRHLLVKVDAKTKALLDAWKAQQQAS-----TAAAAAAAATTADGVDLDEATRRVDE--ATQQEIRAVIREHESQLSGESGGADNFQRRRRKERK-DDLDNMDIEDDKKDLISREISKFR 162

HSP 2 Score: 76.6406 bits (187), Expect = 5.340e-15
Identity = 57/124 (45.97%), Postives = 88/124 (70.97%), Query Frame = 1 
Query: 1126 KQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYE--TEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRM 1491
            K+LEK+L +KEA+YQ+RL+ W AREKKR K YE   +KERN  +  ++ +EA++L++FFE+YDD++ D KY+ G  L +RL  R  E  +DERDR +E E+++  R + ++E  P+ +  ILR+
Sbjct:  300 KRLEKRLWEKEASYQERLKNWVAREKKRCKLYEKDAKKERN--RRRDMTKEAKRLRVFFEEYDDDRDDPKYFMGNALAKRLWEREKELESDERDRWREREELQELRLRFIREGRPDPDGDILRV 421
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Yeast
Match: PAB1 (Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967])

HSP 1 Score: 50.0618 bits (118), Expect = 1.148e-6
Identity = 24/83 (28.92%), Postives = 46/83 (55.42%), Query Frame = 1 
Query:  244 TTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELL 492
            T +++ NI+ + +D   +++ AK G ++S    + A GKL+ FGF  Y+  E  ++ +  LND  ++ + L V    K +E +
Sbjct:  219 TNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERM 301
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Nematostella
Match: EDO32076 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SW43])

HSP 1 Score: 105.916 bits (263), Expect = 1.297e-27
Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 1 
Query: 2014 VETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            +E RI+PW++KKIV YIGEEEP+L++FIC +VL    P  IL D++MVL+EEA+VFV+KMWRLLIY  E KK GL K
Sbjct:    1 MERRIRPWINKKIVEYIGEEEPTLTEFICSKVLSGSPPKSILDDVSMVLDEEAEVFVVKMWRLLIYETEAKKIGLVK 77
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Nematostella
Match: EDO25939 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TDB3])

HSP 1 Score: 86.2705 bits (212), Expect = 1.186e-19
Identity = 36/54 (66.67%), Postives = 46/54 (85.19%), Query Frame = 1 
Query:  310 KCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVD 471
            KCG V+SWKRVQGA+GKLQAFGFCEY +PEA+LR IRLL++  + DK+LV+ + 
Sbjct:    1 KCGIVVSWKRVQGANGKLQAFGFCEYSDPEASLRAIRLLHNLQVGDKSLVLSIS 54
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Nematostella
Match: EDO33206 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SSV8])

HSP 1 Score: 53.5286 bits (127), Expect = 2.863e-7
Identity = 35/131 (26.72%), Postives = 62/131 (47.33%), Query Frame = 1 
Query:  193 VSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERIN 585
            +S  E  +K  +  +  T V++ N  + + D  MK++ A+ G ++S K +    GK + FGF  ++ PE     + +LN   I  + L              + G+ +K  E R AE     E++++ERIN
Sbjct:  177 MSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRL--------------WAGRAKKRAE-RAAEVKAEIEKKRQERIN 292
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Medaka
Match: rbm25a (RNA binding motif protein 25a [Source:ZFIN;Acc:ZDB-GENE-090312-142])

HSP 1 Score: 151.369 bits (381), Expect = 8.386e-40
Identity = 127/371 (34.23%), Postives = 196/371 (52.83%), Query Frame = 1 
Query: 1261 IAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAII---------------LRMEQSMQEHLQKRLKFDFD------------SMPLVSDDTKPGFIALESNTIMNNSSSEA----VSPGNSAL---------PVIN-DLEISNTSNDHQLCSANEVKVNYNDSCMD--DSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            + +EA++L+ F EDYDDE+ D KYYRG+  ++RL  R  E   DERDR +E E++E  RQ+LL E +P+ +A +               L++E   +EH  +   F  D            +M  ++  T P   +   N   N+ S+E+    + PG +           P I   L++  T++  QL +    K+   DS  +  D  +      K  ++P         + +  D  E        SA  G S+   E++  +K +I+ IPT + +LF+YP++W  +D   ++ RI+PW++KKI+ YIGEEEP+L  F+C +V+ H TP  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL K
Sbjct:    1 MMKEAKRLKEFLEDYDDERDDLKYYRGSAFQKRLRDREKEIEMDERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEEEAERRRQPPPLKLEP--EEHNGEEDIFRDDEASQEAKPQPKPAMRPIT--TAPSVSSASGNATPNSPSNESPCGIIIPGENTPDLQPLDEHRPKIGLSLKLGATNSPAQLNAVKRKKLAPVDSVFNKFDDDEADEQPRKRKLVP--LDYGDDDKSLGLDGAE-------MSAPKG-SVNTEEKRKHIKSLIEKIPTARPELFSYPLDWAMVDSILMDRRIRPWINKKIIEYIGEEEPTLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK 357
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Medaka
Match: rbm25b (RNA-binding protein 25-like [Source:NCBI gene;Acc:101165683])

HSP 1 Score: 148.288 bits (373), Expect = 1.855e-36
Identity = 90/194 (46.39%), Postives = 121/194 (62.37%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQ-----KAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKE-AGSXXXXXXXXXXXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFR 801
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQAFGFCEY  PE+TLR +RLL+D  I DK L+VKVD KT   L ++K KK+     KA ED   +DV   E +KK+ +                 I  +++E A      +  E+ +++  K +  +  +I+ +D++ DK +LISREI  FR
Sbjct:   75 PTTTVFVGNISEKASDMLIRQLLAKCGIVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGDKNLLVKVDAKTKAQLDEWKAKKKTANGNKAPEDEGDDDVLDEETKKKDEV-------------VKGAIDGLMREYAAELNAPSQDEESQRRKRKKEKKEEDDINTIDIEEDKRDLISREISKFR 255

HSP 2 Score: 139.813 bits (351), Expect = 9.305e-34
Identity = 58/109 (53.21%), Postives = 83/109 (76.15%), Query Frame = 1 
Query: 1912 ERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            E++  +K +I+ IPT K +LF YP++W  +D + +E R++PW++KKI+ YIGEEE +L  F+C +V+ H TP  IL D+AMVL+EEA+VF++KMWRLLIY  E KK GL
Sbjct:  699 EKRKHIKSLIEKIPTAKPELFTYPLDWSMVDTTLMERRVRPWINKKIIEYIGEEEATLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGL 807

HSP 3 Score: 81.2629 bits (199), Expect = 2.265e-15
Identity = 59/117 (50.43%), Postives = 85/117 (72.65%), Query Frame = 1 
Query: 1126 KQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEA 1476
            ++LE+KLRDKEAAYQ+RL+ WE RE+K+ +DY  + ER   +  E  +E ++L+ F EDYDDE+ D KYYRG+ L++RL  R  E   DERDR +E E++E  RQ+LL+E +P+ +A
Sbjct:  374 RKLERKLRDKEAAYQERLKNWELRERKKARDYAKDTEREDERRRETLKEGKRLKEFLEDYDDERDDPKYYRGSALQKRLRDREKEIEVDERDRKREKEELEEIRQRLLEEGHPDPDA 490
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Medaka
Match: ENSORLT00000037745.1 (pep primary_assembly:ASM223467v1:22:1892808:1894478:1 gene:ENSORLG00000024690.1 transcript:ENSORLT00000037745.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 111.694 bits (278), Expect = 1.398e-28
Identity = 61/95 (64.21%), Postives = 75/95 (78.95%), Query Frame = 1 
Query:  238 PITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKA 522
            P TTVF+GNISEK SD L++ +LAKCG VLSWKRVQGASGKLQ FGFCEY  PE+TLR +RLL++  + DK L+VKVD KT   L ++K K++ A
Sbjct:   34 PTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRVQGASGKLQ-FGFCEYKEPESTLRALRLLHELLLGDKKLLVKVDAKTKAQLEEWKAKRRSA 127
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Medaka
Match: cstf2 (cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:101163985])

HSP 1 Score: 55.8398 bits (133), Expect = 1.142e-7
Identity = 27/81 (33.33%), Postives = 48/81 (59.26%), Query Frame = 1 
Query:  223 SSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQG-ASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
             + +R + +VF+GNI  + ++  +KD+ ++ G V+S++ V    +GK + +GFCEY + E  L  +R LN    S + L V
Sbjct:   22 PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 102
[Close]
BLAST of RNA-binding protein 25 vs. Ensembl Medaka
Match: cstf2 (cleavage stimulation factor subunit 2 [Source:NCBI gene;Acc:101163985])

HSP 1 Score: 55.8398 bits (133), Expect = 1.363e-7
Identity = 27/81 (33.33%), Postives = 48/81 (59.26%), Query Frame = 1 
Query:  223 SSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQG-ASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVV 462
             + +R + +VF+GNI  + ++  +KD+ ++ G V+S++ V    +GK + +GFCEY + E  L  +R LN    S + L V
Sbjct:   22 PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 102
[Close]
BLAST of RNA-binding protein 25 vs. Planmine SMEST
Match: SMESG000074815.1 (SMESG000074815.1)

HSP 1 Score: 1116.29 bits (2886), Expect = 0.000e+0
Identity = 727/727 (100.00%), Postives = 727/727 (100.00%), Query Frame = 1 
Query:   64 MSYPNQXXXXXXXXXXXXXXXXXXXXXXTAAPVIIPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSXXXXXXXXXXXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNXXXXXXXXXXXXXXXQPNEEERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            MSYPNQSPHMYPYIPPPYIHPPIGISISTAAPVIIPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSDLTTNDKEKKEKKLEKNDLVKGLNIDDVDLDGDKNNLISREIEIFRNKHKDDDNNDDKEERYKRLREREKRRERDRERSKDVNRHRRHRSRSRSKASRQPNEEERQRKISRADSRSSSITSKKRRSGSQDTQKSSKRSKKDSDKEYDEYETTMFKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGTELERRLTARRAEELADERDRMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK
Sbjct:    1 MSYPNQSPHMYPYIPPPYIHPPIGISISTAAPVIIPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSDLTTNDKEKKEKKLEKNDLVKGLNIDDVDLDGDKNNLISREIEIFRNKHKDDDNNDDKEERYKRLREREKRRERDRERSKDVNRHRRHRSRSRSKASRQPNEEERQRKISRADSRSSSITSKKRRSGSQDTQKSSKRSKKDSDKEYDEYETTMFKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGTELERRLTARRAEELADERDRMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 727
[Close]
BLAST of RNA-binding protein 25 vs. Planmine SMEST
Match: SMESG000074815.1 (SMESG000074815.1)

HSP 1 Score: 1102.43 bits (2850), Expect = 0.000e+0
Identity = 720/727 (99.04%), Postives = 724/727 (99.59%), Query Frame = 1 
Query:   64 MSYPNQXXXXXXXXXXXXXXXXXXXXXXTAAPVIIPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSXXXXXXXXXXXXXXXXXXXVKGLNIDDVDLDGDKNNLISREIEIFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNXXXXXXXXXXXXXXXQPNEEERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 2244
            MSYPNQSPHMYPYIPPPYIHPPIGISISTAAPVIIPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSDLTTNDKEKKEKKLEKNDLVKGLNIDDVDLDGDKNNLISREIEIFRNKHKDDDNNDDKEERYKRLREREKRRERDRERSKDVNRHRRHRSRSRSKASRQPNEEERQRKISRADSRSSSITSKKRRSGSQDTQKSSKRSKKDSDKEYDEYETTMFKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGTELERRLTARRAEELADERDRMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDTKPGFIALESNT+ ++ S +AVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK
Sbjct:    1 MSYPNQSPHMYPYIPPPYIHPPIGISISTAAPVIIPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGSDLTTNDKEKKEKKLEKNDLVKGLNIDDVDLDGDKNNLISREIEIFRNKHKDDDNNDDKEERYKRLREREKRRERDRERSKDVNRHRRHRSRSRSKASRQPNEEERQRKISRADSRSSSITSKKRRSGSQDTQKSSKRSKKDSDKEYDEYETTMFKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGTELERRLTARRAEELADERDRMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDTKPGFIALESNTVSDSFSFKAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGLDK 727
[Close]
BLAST of RNA-binding protein 25 vs. Planmine SMEST
Match: SMESG000074806.1 (SMESG000074806.1)

HSP 1 Score: 313.538 bits (802), Expect = 6.419e-96
Identity = 194/392 (49.49%), Postives = 260/392 (66.33%), Query Frame = 1 
Query: 1120 MFKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEIAEEARKLQIFFEDYDDEKWDSKYYRGXXXXXXXXXXXXXXXXXXXXXMKEVEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSDDT-------------KPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSANEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQI---SEDN---VEDHNRINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESFVETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLEEEADVFVMKMWRLLIYVIEEKKAGL 2238
            +FK+LEKKLRDKEA+YQKRLQ WE REK++ K+Y  E+ER   K+N+++EEA+KLQIFFE+YDDE  D+KYY  +ELERR   R+ EE AD +DR KE+EQIE+TR++LLKE+NP+VE +IL+MEQSMQEHL+KRL  +     L S  T             K   I LE N     S+ + ++      PV+ +  +    +D +       ++ +N  C  D+              P+T+      Q+    +D     E+ +  N  + +  ++    +RK+++KKIID IPT K +LF+Y IEWD IDE+FVE  +KPW++KKI+ YIGEEEP+LSKFICDQVL+HKTPDQIL DI+MVLEEEA++FVMKMWRLLIYVIEEKK GL
Sbjct:  301 VFKKLEKKLRDKEASYQKRLQAWELREKRQAKEYLIEEEREKTKKNDLSEEAKKLQIFFEEYDDEISDAKYYMNSELERRWAVRQTEESADAKDRSKEIEQIENTRRRLLKENNPDVEEVILKMEQSMQEHLKKRLTDNSVDATLASVKTEKENVPNEMIKSEKRETIPLEDNI----STHDLLNNNIVDKPVVVEGVVKECVSDQKPG-----EIQHNSKCQVDNNPA----------DPETSNHGNHEQLLLPCDDKKPLPENESNPNEGNTNPLSTPEKVDRKVMMKKIIDAIPTSKEELFSYIIEWDMIDENFVEMSMKPWINKKIIEYIGEEEPTLSKFICDQVLEHKTPDQILDDISMVLEEEAEIFVMKMWRLLIYVIEEKKIGL 673

HSP 2 Score: 171.785 bits (434), Expect = 1.168e-44
Identity = 86/165 (52.12%), Postives = 118/165 (71.52%), Query Frame = 1 
Query:  166 IPKPQLPTTVSNAETNQKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKLQAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKKQKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAG 660
            +P P +   ++N+           P+  +FI NISEKI D  MK +L KCG +L+WKRVQGASGKLQAFG CEY+NPEATLRCIRLLN   ++DK+L+VKVDPKTDELL +Y  K +K I D + E++  +EEEK+E+IN I  +  +ED+  L+++KKI+++ G
Sbjct:   14 VPPPAIYPAINNS-----------PVVALFISNISEKIPDPEMKTILDKCGEILNWKRVQGASGKLQAFGLCEYENPEATLRCIRLLNGLKVADKSLLVKVDPKTDELLKEYLMKVKKTI-DEKYENL--SEEEKQEKINQIDMKRNNEDKVCLSEVKKILEDIG 164
The following BLAST results are available for this feature:
BLAST of RNA-binding protein 25 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RBM252.927e-3761.82RNA binding motif protein 25 [Source:HGNC Symbol;A... [more]
RBM256.344e-3746.38RNA binding motif protein 25 [Source:HGNC Symbol;A... [more]
RBM256.864e-3745.41RNA binding motif protein 25 [Source:HGNC Symbol;A... [more]
RBM253.354e-3446.38RNA binding motif protein 25 [Source:HGNC Symbol;A... [more]
RBM253.354e-3446.38RNA binding motif protein 25 [Source:HGNC Symbol;A... [more]
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BLAST of RNA-binding protein 25 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm-252.113e-4028.02RNA Binding Motif protein homolog [Source:UniProt... [more]
rbm-253.299e-3928.02RNA Binding Motif protein homolog [Source:UniProt... [more]
rbm-251.687e-3828.30RNA Binding Motif protein homolog [Source:UniProt... [more]
rbm-251.687e-3828.30RNA Binding Motif protein homolog [Source:UniProt... [more]
rbm-251.687e-3828.30RNA Binding Motif protein homolog [Source:UniProt... [more]
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BLAST of RNA-binding protein 25 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 3
Match NameE-valueIdentityDescription
CG41191.639e-3049.59gene:FBgn0028474 transcript:FBtr0340463[more]
CG41191.639e-3049.59gene:FBgn0028474 transcript:FBtr0070799[more]
CstF646.242e-1037.50gene:FBgn0027841 transcript:FBtr0083660[more]
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BLAST of RNA-binding protein 25 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm25a1.590e-4433.25RNA binding motif protein 25a [Source:ZFIN;Acc:ZDB... [more]
rbm25b4.164e-3549.21RNA binding motif protein 25b [Source:ZFIN;Acc:ZDB... [more]
rbm25a5.587e-3363.33RNA binding motif protein 25a [Source:ZFIN;Acc:ZDB... [more]
rbm25b2.153e-3242.86RNA binding motif protein 25b [Source:ZFIN;Acc:ZDB... [more]
rbm25a8.939e-2758.23RNA binding motif protein 25a [Source:ZFIN;Acc:ZDB... [more]
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BLAST of RNA-binding protein 25 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm254.599e-3454.05RNA binding motif protein 25 [Source:NCBI gene;Acc... [more]
rbm255.247e-3454.05RNA binding motif protein 25 [Source:NCBI gene;Acc... [more]
rbm256.025e-3454.05RNA binding motif protein 25 [Source:NCBI gene;Acc... [more]
mcm3ap9.709e-832.95minichromosome maintenance complex component 3 ass... [more]
mcm3ap1.021e-732.95minichromosome maintenance complex component 3 ass... [more]
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BLAST of RNA-binding protein 25 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rbm253.074e-3763.64RNA binding motif protein 25 [Source:MGI Symbol;Ac... [more]
Rbm251.348e-3446.38RNA binding motif protein 25 [Source:MGI Symbol;Ac... [more]
Rbm258.693e-3452.03RNA binding motif protein 25 [Source:MGI Symbol;Ac... [more]
Rbm258.356e-3073.24RNA binding motif protein 25 [Source:MGI Symbol;Ac... [more]
Pabpc4l6.358e-832.79poly(A) binding protein, cytoplasmic 4-like [Sourc... [more]
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BLAST of RNA-binding protein 25 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P49756|RBM25_HUMAN1.611e-3346.38RNA-binding protein 25 OS=Homo sapiens OX=9606 GN=... [more]
sp|B2RY56|RBM25_MOUSE6.081e-3352.03RNA-binding protein 25 OS=Mus musculus OX=10090 GN... [more]
sp|Q8WZK0|US107_SCHPO4.936e-1133.33U1 snRNP-associated protein usp107 OS=Schizosaccha... [more]
sp|Q8C7E9|CSTFT_MOUSE5.261e-733.75Cleavage stimulation factor subunit 2 tau variant ... [more]
sp|Q9H0L4|CSTFT_HUMAN7.006e-733.75Cleavage stimulation factor subunit 2 tau variant ... [more]
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BLAST of RNA-binding protein 25 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4S2LAD43.316e-8142.82Uncharacterized protein OS=Opisthorchis felineus O... [more]
A0A3R7HBH03.992e-8042.58RNA-binding protein 25 OS=Clonorchis sinensis OX=7... [more]
A0A4Z2D2V01.428e-7545.45RNA-binding protein OS=Schistosoma japonicum OX=61... [more]
A0A183K8W04.626e-7444.10PWI domain-containing protein OS=Schistosoma curas... [more]
G4V9Z21.538e-7344.36Putative rna binding motif protein 25 OS=Schistoso... [more]
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BLAST of RNA-binding protein 25 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm25b1.881e-3454.95RNA binding motif protein 25b [Source:ZFIN;Acc:ZDB... [more]
rbm25b3.304e-3454.95RNA binding motif protein 25b [Source:ZFIN;Acc:ZDB... [more]
cstf22.084e-733.33cleavage stimulation factor subunit 2 [Source:NCBI... [more]
cstf22.283e-733.33cleavage stimulation factor subunit 2 [Source:NCBI... [more]
cstf22.324e-733.33cleavage stimulation factor subunit 2 [Source:NCBI... [more]
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BLAST of RNA-binding protein 25 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ENSPMAT00000004295.13.514e-3454.05pep scaffold:Pmarinus_7.0:GL477124:56243:73234:1 g... [more]
ENSPMAT00000009751.17.349e-2238.69pep scaffold:Pmarinus_7.0:GL485909:19:7776:-1 gene... [more]
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BLAST of RNA-binding protein 25 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
PAB11.148e-628.92Poly(A) binding protein; part of the 3'-end RNA-pr... [more]
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BLAST of RNA-binding protein 25 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 3
Match NameE-valueIdentityDescription
EDO320761.297e-2763.64Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO259391.186e-1966.67Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO332062.863e-726.72Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of RNA-binding protein 25 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rbm25a8.386e-4034.23RNA binding motif protein 25a [Source:ZFIN;Acc:ZDB... [more]
rbm25b1.855e-3646.39RNA-binding protein 25-like [Source:NCBI gene;Acc:... [more]
ENSORLT00000037745.11.398e-2864.21pep primary_assembly:ASM223467v1:22:1892808:189447... [more]
cstf21.142e-733.33cleavage stimulation factor subunit 2 [Source:NCBI... [more]
cstf21.363e-733.33cleavage stimulation factor subunit 2 [Source:NCBI... [more]
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BLAST of RNA-binding protein 25 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000074815.10.000e+0100.00SMESG000074815.1[more]
SMESG000074815.10.000e+099.04SMESG000074815.1[more]
SMESG000074806.16.419e-9649.49SMESG000074806.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30030342 ID=SMED30030342|Name=RNA-binding protein 25|organism=Schmidtea mediterranea sexual|type=transcript|length=2350bp
AATTCGGTAGCCGCGTTGTTTAAATTTTCCTTGATATAAGATATATTTCT
TAAATTTAAAAAAATGTCATATCCCAATCAGTCACCTCATATGTATCCAT
ATATTCCTCCTCCATATATTCATCCTCCGATTGGTATTTCTATTAGCACA
GCCGCTCCGGTTATAATTCCAAAACCACAATTACCAACCACAGTATCTAA
TGCAGAAACTAATCAAAAGTTTTCATCTTTTGAGCGTCCAATCACAACAG
TTTTTATCGGTAATATTTCGGAAAAAATTTCAGATTCATTGATGAAAGAT
GTTCTTGCAAAATGTGGTAATGTATTGAGTTGGAAAAGGGTACAAGGGGC
GTCTGGCAAATTACAAGCTTTTGGATTTTGTGAATACGATAATCCAGAAG
CAACTTTACGTTGCATTCGATTATTGAATGACTTTGCTATTTCTGATAAG
ACTCTCGTTGTAAAAGTTGATCCTAAAACTGATGAATTGTTAACAGACTA
TAAAGGTAAAAAACAGAAAGCCATTGAAGATAGAGAAGCGGAAGATGTAA
CTCGAACAGAAGAAGAAAAGAAGGAACGAATTAATTTGATTTACGCCAGA
GAAGCTGACGAAGATAGAAATGCTTTAACTCAAATCAAAAAAATAATTAA
AGAAGCTGGCTCTGATTTGACAACAAATGATAAAGAAAAAAAAGAAAAAA
AATTAGAAAAAAATGATCTAGTTAAAGGATTGAATATTGATGATGTGGAT
TTAGATGGAGATAAAAATAATTTAATTTCACGGGAAATTGAAATATTTAG
GAATAAACATAAGGATGATGATAATAATGACGATAAAGAAGAGCGCTATA
AAAGACTAAGAGAACGAGAGAAGCGTAGGGAACGGGACAGAGAGCGCAGT
AAAGATGTAAACCGACATCGTCGGCATAGAAGTAGATCAAGATCTAAAGC
AAGCCGTCAACCGAATGAAGAAGAACGACAACGAAAAATATCTAGAGCAG
ATTCGAGAAGTTCTTCTATAACATCAAAAAAACGAAGATCTGGTTCCCAA
GATACTCAGAAAAGTTCTAAAAGATCAAAAAAAGATTCCGATAAAGAATA
CGATGAATATGAAACTACGATGTTTAAACAACTGGAGAAAAAGCTTAGAG
ACAAAGAAGCAGCATATCAAAAACGTCTTCAAACTTGGGAAGCAAGAGAG
AAGAAACGACTTAAGGATTATGAAACGGAAAAAGAGAGGAACATTTGCAA
AGAGAACGAAATAGCCGAGGAAGCAAGAAAGCTGCAAATATTCTTTGAGG
ATTATGACGATGAAAAGTGGGACTCGAAATATTACCGAGGAACGGAATTG
GAGAGACGCTTGACTGCTAGGCGTGCTGAAGAATTAGCAGACGAGAGAGA
TCGAATGAAAGAAGTTGAGCAAATTGAAAGTACTCGACAAAAACTACTGA
AAGAACACAATCCGAATGTCGAGGCCATAATATTACGAATGGAGCAATCT
ATGCAAGAACATCTACAGAAACGCCTGAAATTCGATTTTGATTCAATGCC
TCTTGTTAGTGATGATACCAAGCCGGGTTTCATTGCTCTAGAATCCAACA
CGATAATGAATAATTCATCATCAGAAGCTGTTTCTCCTGGCAACAGTGCG
CTTCCCGTTATCAACGATCTGGAAATATCAAATACCAGCAACGACCATCA
GTTATGTTCCGCCAATGAAGTGAAAGTGAATTATAATGATTCCTGCATGG
ACGACAGTCAGAAAGGATTAAATGATTCATTCAAACCAATGATTCTACCT
CCACAAACAACCGTGACGTCTGCTGCTAGGCAAATTTCCGAGGATAATGT
CGAGGATCACAACAGAATAAATCACAAATCTGCACATTCAGGAACATCAA
TTCCTCACACAGAAAGAAAATTACTCGTCAAGAAAATCATTGATGGAATT
CCAACAATTAAAGCCGATCTCTTTGCCTATCCGATTGAATGGGATACGAT
AGATGAAAGTTTTGTCGAAACCCGCATCAAGCCATGGGTTGATAAGAAAA
TCGTCGCATATATCGGTGAGGAAGAGCCGTCTCTGTCGAAATTTATCTGT
GATCAAGTATTAGATCATAAAACCCCTGATCAAATTCTCGCTGATATTGC
AATGGTACTGGAAGAAGAAGCTGATGTATTCGTTATGAAAATGTGGCGCT
TACTAATCTACGTTATTGAAGAGAAAAAGGCCGGTTTGGATAAATGAAAA
AATTTTTTTCAACAAACTTCTTTTTGTAATATCAGTTTGTTTCCTGTTGT
ACAGAAAAAAGAATTTAAATATAATTTCATAATTTGTCTTAGTTCATTTG
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protein sequence of SMED30030342-orf-1

>SMED30030342-orf-1 ID=SMED30030342-orf-1|Name=SMED30030342-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=728bp
MSYPNQSPHMYPYIPPPYIHPPIGISISTAAPVIIPKPQLPTTVSNAETN
QKFSSFERPITTVFIGNISEKISDSLMKDVLAKCGNVLSWKRVQGASGKL
QAFGFCEYDNPEATLRCIRLLNDFAISDKTLVVKVDPKTDELLTDYKGKK
QKAIEDREAEDVTRTEEEKKERINLIYAREADEDRNALTQIKKIIKEAGS
DLTTNDKEKKEKKLEKNDLVKGLNIDDVDLDGDKNNLISREIEIFRNKHK
DDDNNDDKEERYKRLREREKRRERDRERSKDVNRHRRHRSRSRSKASRQP
NEEERQRKISRADSRSSSITSKKRRSGSQDTQKSSKRSKKDSDKEYDEYE
TTMFKQLEKKLRDKEAAYQKRLQTWEAREKKRLKDYETEKERNICKENEI
AEEARKLQIFFEDYDDEKWDSKYYRGTELERRLTARRAEELADERDRMKE
VEQIESTRQKLLKEHNPNVEAIILRMEQSMQEHLQKRLKFDFDSMPLVSD
DTKPGFIALESNTIMNNSSSEAVSPGNSALPVINDLEISNTSNDHQLCSA
NEVKVNYNDSCMDDSQKGLNDSFKPMILPPQTTVTSAARQISEDNVEDHN
RINHKSAHSGTSIPHTERKLLVKKIIDGIPTIKADLFAYPIEWDTIDESF
VETRIKPWVDKKIVAYIGEEEPSLSKFICDQVLDHKTPDQILADIAMVLE
EEADVFVMKMWRLLIYVIEEKKAGLDK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0008234cysteine-type peptidase activity
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
Vocabulary: INTERPRO
TermDefinition
IPR034268RBM25_RRM
IPR036483PWI_dom_sf
IPR035979RBD_domain_sf
IPR025773AV_PCPbeta
IPR000504RRM_dom
IPR002483PWI_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: biological process
TermDefinition
GO:0006397mRNA processing
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 358..378
NoneNo IPR availableCOILSCoilCoilcoord: 248..275
NoneNo IPR availableGENE3DG3DSA:1.20.1390.10coord: 610..727
e-value: 5.4E-41
score: 141.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..347
NoneNo IPR availablePANTHERPTHR18806RBM25 PROTEINcoord: 7..727
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 62..134
e-value: 2.2E-11
score: 53.8
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 63..131
e-value: 8.4E-9
score: 35.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 61..138
score: 11.861
IPR002483PWI domainSMARTSM00311pwi_2coord: 647..720
e-value: 3.6E-24
score: 96.3
IPR002483PWI domainPFAMPF01480PWIcoord: 654..719
e-value: 1.3E-12
score: 47.9
IPR002483PWI domainPROSITEPS51025PWIcoord: 634..727
score: 28.19
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 52..172
e-value: 3.1E-13
score: 51.9
IPR034268RBM25, RNA recognition motifCDDcd12446RRM_RBM25coord: 61..143
e-value: 2.56938E-37
score: 131.963
IPR036483PWI domain superfamilySUPERFAMILYSSF101233PWI domaincoord: 654..718
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 51..138