BHLH domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30030281 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 11Note: Hover over icons to view figure legend
Homology
BLAST of BHLH domain-containing protein vs. Ensembl Human
Match: CCDC169 (coiled-coil domain containing 169 [Source:HGNC Symbol;Acc:HGNC:34361]) HSP 1 Score: 48.1358 bits (113), Expect = 5.254e-6 Identity = 67/237 (28.27%), Postives = 108/237 (45.57%), Query Frame = 2 Query: 134 LKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMR--SSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELKYMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 838 LK L+E + K V+ S EL I E E +L+ N E +EWKTRY+ Q E ND++ KQI+ +++K+++ D ++R +P ES +L+K L+EE+ L Q + ++ QE+KA+ K N +R+ E+ SG + Q+V +L P + + K R P Q+ + K GP+KK + +LP L Sbjct: 17 LKQQLLEEVRKKDAVQLSIFELRHKITELEAKLNTDN-EGSEWKTRYETQLELNDELEKQIVYLKEKVEKIHGNSSDRLSSIRVYERMPVES-----LNTLLKQLEEEKKTLESQVKYYALKLEQESKAYQKINNERRTYLAEMSQG--------------------------SGLHQVSKRQQVDQL----PRMQENLVKTG-----RYNPAKQKTVSAKRGPVKKITRPNHLPEL 212
BLAST of BHLH domain-containing protein vs. Ensembl Zebrafish
Match: ccdc169 (coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]) HSP 1 Score: 72.4034 bits (176), Expect = 1.446e-14 Identity = 64/198 (32.32%), Postives = 109/198 (55.05%), Query Frame = 2 Query: 152 QEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEI--LSATENINELKYMTDP--GPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKL 733 E+++K +++DS S+L T+A+ E+RL +V E NEW+TRY+ Q E N+Q+ KQI ++++++Q ++ D ++RS YE D +K L E+ L Q D RI+QE KA+ K E+R+A EI LS+T N++ + M + +P ++ +S A ++ S N +R+P+L Sbjct: 20 HEREVKEMLQDSVSDLRNTLADLERRLHSVEEEENEWRTRYETQLELNEQLEKQISVVRERLQTLRSDPSDRLASIRS---YEEMSEDALRQRLKLLSSEKSGLQAQLMDFRMRIVQEGKAYQKVYEERRAYLAEIAKLSSTLNLSRKQQMAEARRTAAAPDKTAGKSTKQHSGAA-----KKGSVNNTPARSRLPRL 209
BLAST of BHLH domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000001146.1 (coiled-coil domain containing 169 [Source:NCBI gene;Acc:100497065]) HSP 1 Score: 68.1662 bits (165), Expect = 6.738e-13 Identity = 55/148 (37.16%), Postives = 88/148 (59.46%), Query Frame = 2 Query: 122 GIKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRS--SVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEI 559 G +L + EK+MK +++ S EL TIAE E+RL++V E NEWKTRY+ Q E N Q+ +QI I+++K + + D ++RS +P LG ++ +K L +E+ + Q +D + RI QE KA++K N +R+ +EI Sbjct: 14 GSYQLTEDIQLEKKMKEMLQISTFELKNTIAELERRLNSVEDEGNEWKTRYETQVELNKQLERQIYILREKSENIRGNPTDRLSSIRSFDQMP----LGALN-QFLKHLDDEKILMENQLKDFELRIEQEAKAYYKVNNERRMYVSEI 156
BLAST of BHLH domain-containing protein vs. Ensembl Mouse
Match: Ccdc169 (coiled-coil domain containing 169 [Source:MGI Symbol;Acc:MGI:2444356]) HSP 1 Score: 59.6918 bits (143), Expect = 4.493e-10 Identity = 67/214 (31.31%), Postives = 118/214 (55.14%), Query Frame = 2 Query: 113 SVEGIK--ELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMR--SSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEI--LSATENINELKYMTDPGP---QSPPRSPKQSVSGQPPT----APVQRVQR---LSTVNP 706 + EG+ LK L+E MK +V+ S E+ IAE E L+ + +EWKTRY+ Q E NDQ+ KQI+ +++K+++ + D ++R +P ES L+K L++E+ L Q ++ +R+ QE+KA+H+ N +R++ E+ +S + +++ + M DP P +SP ++ + + Q T PV++V R L +NP Sbjct: 8 TFEGVSTDRLKLELLEEIHMKDVVQLSTLEIRHKIAELEANLNG-DLAGSEWKTRYETQLELNDQLEKQIVSLKEKMEKMRGNPSDRLSSIRVYEKMPVES-----LNVLLKQLEKEKRSLESQVKEYAFRLEQESKAYHRTNNERRSYIAEMTQVSGSNQVSKRQQM-DPLPRMKESPVKTGRHNSMNQKTTNAKKGPVKKVPRSNHLPKLNP 214
BLAST of BHLH domain-containing protein vs. Ensembl Mouse
Match: Ccdc169 (coiled-coil domain containing 169 [Source:MGI Symbol;Acc:MGI:2444356]) HSP 1 Score: 53.5286 bits (127), Expect = 5.516e-8 Identity = 56/174 (32.18%), Postives = 100/174 (57.47%), Query Frame = 2 Query: 113 SVEGIK--ELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMR--SSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEI--LSATENINELKYMTDPGPQ 616 + EG+ LK L+E MK +V+ S E+ IAE E L+ + +EWKTRY+ Q E NDQ+ KQI+ +++K+++ + D ++R +P ES L+K L++E+ L Q ++ +R+ QE+KA+H+ N +R++ E+ +S + +++ + M DP P+ Sbjct: 8 TFEGVSTDRLKLELLEEIHMKDVVQLSTLEIRHKIAELEANLNG-DLAGSEWKTRYETQLELNDQLEKQIVSLKEKMEKMRGNPSDRLSSIRVYEKMPVES-----LNVLLKQLEKEKRSLESQVKEYAFRLEQESKAYHRTNNERRSYIAEMTQVSGSNQVSKRQQM-DPLPR 174
BLAST of BHLH domain-containing protein vs. UniProt/SwissProt
Match: sp|Q3KPT0|CC169_XENLA (Coiled-coil domain-containing protein 169 OS=Xenopus laevis OX=8355 GN=ccdc169 PE=2 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 1.282e-9 Identity = 51/137 (37.23%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 155 EKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRS--SVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEI 559 EK K +++ S EL TIAE E+RL++V E NEWKTRY+ Q E N Q+ +QI I+++K + + D ++RS +P +G ++ +K L +E+ L Q ++ + RI QE KA++K N +R+ +EI Sbjct: 25 EKNKKEMLQMSTFELKNTIAELEQRLNSVEDEGNEWKTRYETQIELNKQLERQIYILREKSENIRGNPTDRLSSIRSLDQMP----VGALN-QFVKHLDDEKILLENQLKNFELRIEQEAKAYYKVNNERRMYISEI 156
BLAST of BHLH domain-containing protein vs. UniProt/SwissProt
Match: sp|Q8BXX9|CC169_MOUSE (Coiled-coil domain-containing protein 169 OS=Mus musculus OX=10090 GN=Ccdc169 PE=2 SV=2) HSP 1 Score: 59.6918 bits (143), Expect = 3.143e-9 Identity = 67/214 (31.31%), Postives = 118/214 (55.14%), Query Frame = 2 Query: 113 SVEGIK--ELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMR--SSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEI--LSATENINELKYMTDPGP---QSPPRSPKQSVSGQPPT----APVQRVQR---LSTVNP 706 + EG+ LK L+E MK +V+ S E+ IAE E L+ + +EWKTRY+ Q E NDQ+ KQI+ +++K+++ + D ++R +P ES L+K L++E+ L Q ++ +R+ QE+KA+H+ N +R++ E+ +S + +++ + M DP P +SP ++ + + Q T PV++V R L +NP Sbjct: 8 TFEGVSTDRLKLELLEEIHMKDVVQLSTLEIRHKIAELEANLNG-DLAGSEWKTRYETQLELNDQLEKQIVSLKEKMEKMRGNPSDRLSSIRVYEKMPVES-----LNVLLKQLEKEKRSLESQVKEYAFRLEQESKAYHRTNNERRSYIAEMTQVSGSNQVSKRQQM-DPLPRMKESPVKTGRHNSMNQKTTNAKKGPVKKVPRSNHLPKLNP 214
BLAST of BHLH domain-containing protein vs. TrEMBL
Match: A0A1I8HTG9 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig008072g1 PE=4 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.319e-42 Identity = 97/248 (39.11%), Postives = 150/248 (60.48%), Query Frame = 2 Query: 125 IKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELK----------YMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 838 ++ L+ + +QE QMK +VE+SC+EL T+AE EKR + + E+NEWKTR++IQ+E N+Q+ KQI+I+Q+K+ Q+ +D+Q+ ++S+ ++ G + ++IK LQ+E+ L+ Q++D+DWR+ QE KA+HKANE+RK + EI N+ +++ P+SP SPK+S+ GQ RNIPPDQR+IDP+ GPIKK +AVK LP L Sbjct: 9 LERLRATLMQETQMKEMVEESCNELAVTVAELEKRYEGIEDESNEWKTRFEIQQEINEQLRKQIVILQEKVMQASKTTKDIQRIVKSNT-ITTEFGSATPNMIKLLQKEKTGLINQRKDIDWRVDQEAKAYHKANEERKNIQEEINQINANLGDIRKSNALTTGGEGGAGGRPKSPRGSPKRSI-GQ--------------------------------RNIPPDQRVIDPRKGPIKKTAAVKQLPSL 222
BLAST of BHLH domain-containing protein vs. TrEMBL
Match: A0A1I8FUN8 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.269e-41 Identity = 97/248 (39.11%), Postives = 150/248 (60.48%), Query Frame = 2 Query: 125 IKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELK----------YMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 838 ++ L+ + +QE QMK +VE+SC+EL T+AE EKR + + E+NEWKTR++IQ+E N+Q+ KQI+I+Q+K+ Q+ +D+Q+ ++S+ ++ G + ++IK LQ+E+ L+ Q++D+DWR+ QE KA+HKANE+RK + EI N+ +++ P+SP SPK+S+ GQ RNIPPDQR+IDP+ GPIKK +AVK LP L Sbjct: 57 LERLRATLMQETQMKEMVEESCNELAVTVAELEKRYEGIEDESNEWKTRFEIQQEINEQLRKQIVILQEKVMQASKTTKDIQRIVKSNT-ITTEFGSATPNMIKLLQKEKTGLINQRKDIDWRVDQEAKAYHKANEERKNIQEEINQINANLGDIRKSNALTTGGEGGAGGRPKSPRGSPKRSI-GQ--------------------------------RNIPPDQRVIDPRKGPIKKTAAVKQLPSL 270
BLAST of BHLH domain-containing protein vs. TrEMBL
Match: A0A1I8F213 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.394e-33 Identity = 91/248 (36.69%), Postives = 142/248 (57.26%), Query Frame = 2 Query: 125 IKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELK----------YMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 838 ++ L+ + +QE QMK +VE+SC+EL T+AE EKR + + E+NEWKTR++IQ+E N+Q+ KQI+I+Q+K+ Q+ +D+Q+ ++S+ ++ G + ++IK LQ+E+ L+ Q++D+DWR+ QE K A K + EI N+ +++ P+SP SPK+S+ GQ RNIPPDQR+IDP+ GPIKK +AVK LP L Sbjct: 9 LERLRATLMQETQMKEMVEESCNELAVTVAELEKRYEGIEDESNEWKTRFEIQQEINEQLRKQIVILQEKVMQASKTTKDIQRIVKSNT-ITTEFGSATPNMIKLLQKEKTGLINQRKDIDWRVDQEAKPTRSA----KNIQEEINQINANLGDIRKSNALTTGGEGGAGGRPKSPRGSPKRSI-GQ--------------------------------RNIPPDQRVIDPRKGPIKKTAAVKQLPSL 218
BLAST of BHLH domain-containing protein vs. TrEMBL
Match: A0A210QE62 (Uncharacterized protein OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT12520 PE=4 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.564e-32 Identity = 92/229 (40.17%), Postives = 135/229 (58.95%), Query Frame = 2 Query: 152 QEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELKYMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 838 QEKQMK ++E S SEL TI E EKR D V E NEWKTR + Q+E NDQ+ KQI ++Q K+Q++K+ L+D K+ + ++ DL D + +++ L++E++ L Q RD++WR+ QE+KA+HKA+E+RK + EI +A N L P+ + + P+ +R P+ RNIP DQRI+DPK GPI+K +AVK+LP L Sbjct: 20 QEKQMKEMLEQSSSELRYTIEELEKRYDGVVDEGNEWKTRCETQQEMNDQLDKQIFMLQSKVQEAKSNLKDAGKSTKDMKNFD-DLSDATPHMVRMLEKEKNMLHNQMRDIEWRLDQESKAYHKAHEERKTYSTEIHAAATR-NRL--------------------------PITHRE----LEPIPGSRTPR----DMGRNIPEDQRILDPKRGPIRKTAAVKSLPSL 212
BLAST of BHLH domain-containing protein vs. TrEMBL
Match: A0A2T7PLU9 (Uncharacterized protein OS=Pomacea canaliculata OX=400727 GN=C0Q70_05677 PE=4 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.002e-30 Identity = 86/222 (38.74%), Postives = 130/222 (58.56%), Query Frame = 2 Query: 173 LVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELKYMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 838 +++ S +EL ATI E EKR D++ E NEWKTRY+ Q+E N Q+ +QI+++Q+K++++++ L++ K R + ++ DL D S ++K L E+ L Q RDL+WR+ QE+KA+HKAN++RK EI +A +I+E+K +P GQP T R R + NIP DQRIIDP+ GPIK+ + VK+LP L Sbjct: 97 MLDQSAAELKATIDELEKRFDSIENEGNEWKTRYETQQEMNQQLERQIILLQNKVEEARHNLKEANKTPRDNRNFD-DLSDASPQMVKALDREKQLLHNQLRDLEWRLDQESKAYHKANDERKQYVLEINAAKGSISEMKTRQRQALMAP---------GQPETGSSPRTYRDNAG------------------NIPDDQRIIDPRRGPIKRTAGVKSLPSL 290
BLAST of BHLH domain-containing protein vs. Ensembl Cavefish
Match: ccdc169 (coiled-coil domain-containing protein 169-like [Source:NCBI gene;Acc:111195093]) HSP 1 Score: 60.4622 bits (145), Expect = 1.729e-10 Identity = 49/144 (34.03%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 152 QEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENIN 583 QE+++K ++ S S+L +T+ + E+RL +V E NEW+TRY+ Q E N Q+ +QI ++Q+K++ D ++RS Y+ D +K L E+ L Q + RI QE KA+ KA ++R+A EI + I+ Sbjct: 20 QEREVKEMLVGSVSDLRSTLTDLEQRLHSVEGEGNEWRTRYETQLELNGQLERQIGVVQEKLEGHSGNPMDRLASIRS---YDEMTVDALRQRLKLLSTEKTTLQNQLLEYRLRIDQEGKAYQKAYDERRAYLTEIAKVSSAID 160
BLAST of BHLH domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003020.1 (pep scaffold:Pmarinus_7.0:GL477049:63953:68183:1 gene:ENSPMAG00000002756.1 transcript:ENSPMAT00000003020.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 48.9062 bits (115), Expect = 2.185e-7 Identity = 36/127 (28.35%), Postives = 68/127 (53.54%), Query Frame = 2 Query: 257 EWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELKYMTDPGPQ--SPPRS 631 EW+TRY+ Q+E N+++ Q+ ++ K+++ ++ LR+ M+ Y + L+ +EER L D +WRI QE KA+HK +++ V N++ + + ++Y P+ S PR+ Sbjct: 4 EWRTRYETQRELNERLRLQLEEMRTKVKEGRDTLRERMNVMQG---YNQQSKESLKQLLWKKEEERQSLQETLVDYEWRIAQEAKAYHKVINEKREVLNQLGEVSACMCSIQYQFKALPRKVSTPRA 127
BLAST of BHLH domain-containing protein vs. Ensembl Nematostella
Match: EDO37982 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SE60]) HSP 1 Score: 93.5893 bits (231), Expect = 4.517e-22 Identity = 82/247 (33.20%), Postives = 127/247 (51.42%), Query Frame = 2 Query: 125 IKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAM----RSSVPYE-SDLGDISMSLIKTL--QEERDKLV--RQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELKYMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 838 I+ L+ QEKQMK ++E S EL TI E + + + E+NEWKTR++ Q E N Q+ KQI++ LRD + M R P+ ++ + +K L Q ERDKL Q RDL+WR+ E+KA+HK +E+RK + + I++ K R+ +++++ R S A + K+ + ++F +P +QRIIDPK GPIKK +AV+ LP + Sbjct: 70 IERLRAEIQQEKQMKEMLEQSSEELDKTIVELQGKFEIAGDEDNEWKTRFETQHEMNTQLEKQIIL-----------LRDKLEQMKIPSREGKPHPLRTYNGLTDADVKKLMRQTERDKLQLEGQLRDLEWRLDNESKAYHKISEERKQYFTALNETSAVIDDTKTKRKHALIESQRNSEETLA------------RFS------QATMRKIDSNSSF-GLPDNQRIIDPKKGPIKKTAAVRKLPKI 286
BLAST of BHLH domain-containing protein vs. Planmine SMEST
Match: SMESG000019789.1 (SMESG000019789.1) HSP 1 Score: 459.144 bits (1180), Expect = 8.936e-165 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 2 Query: 101 MAETSVEGIKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELKYMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 838 MAETSVEGIKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNDQISKQILIIQDKIQQSKNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELKYMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL Sbjct: 1 MAETSVEGIKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNDQISKQILIIQDKIQQSKNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELKYMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 246
BLAST of BHLH domain-containing protein vs. Planmine SMEST
Match: SMESG000019789.1 (SMESG000019789.1) HSP 1 Score: 237.654 bits (605), Expect = 6.552e-79 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 2 Query: 101 MAETSVEGIKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENK 511 MAETSVEGIKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNDQISKQILIIQDKIQQSKNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENK Sbjct: 1 MAETSVEGIKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNDQISKQILIIQDKIQQSKNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENK 137
BLAST of BHLH domain-containing protein vs. Planmine SMEST
Match: SMESG000052476.1 (SMESG000052476.1) HSP 1 Score: 132.109 bits (331), Expect = 9.309e-37 Identity = 94/240 (39.17%), Postives = 141/240 (58.75%), Query Frame = 2 Query: 119 EGIKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYENNEWKTRYDIQKETNXXXXXXXXXXXXXXXXXXNQLRDVQKAMRSSVPYESDLGDISMSLIKTLQEERDKLVRQKRDLDWRIIQENKAFHKANEQRKAVTNEILSATENINELKYMTDPGPQSPPRSPKQSVSGQPPTAPVQRVQRLSTVNPMIAARVPKLSTATAFRNIPPDQRIIDPKMGPIKKESAVKNLPPL 838 E I+ L + E+ + ++E S SE+ +++ EK++ + E+NEWKTRYDIQ E NDQ +KQIL++QDK+ SKNQL++VQK++R++ G+I+ ++ L+ E++ L+ Q++D+DWRI QE KA+HKA E RK E+ +A N+ ELK + Q Q V ST++ PK + RNIP +QRIID K GPIKK +A+K LP + Sbjct: 5 EEIERLNAAIEHERNYRDMIEQSTSEIRNALSDIEKQMTNIEDESNEWKTRYDIQCEINDQYNKQILLLQDKLLSSKNQLKEVQKSVRTNTLQADFGGEITSHTVRLLEREKENLINQRKDIDWRIDQEAKAYHKACEDRKNCQIELAAAQLNMIELK-----------------IKNQKEMDAQQMVTSRSTISH--TRHSPKRT--IGLRNIPQNQRIIDRKFGPIKKTAAIKALPSI 223 The following BLAST results are available for this feature:
BLAST of BHLH domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 1
BLAST of BHLH domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of BHLH domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of BHLH domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of BHLH domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of BHLH domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 2
BLAST of BHLH domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 2
BLAST of BHLH domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of BHLH domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of BHLH domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of BHLH domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of BHLH domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of BHLH domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of BHLH domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30030281 ID=SMED30030281|Name=BHLH domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=997bpback to top protein sequence of SMED30030281-orf-1 >SMED30030281-orf-1 ID=SMED30030281-orf-1|Name=SMED30030281-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=247bp MAETSVEGIKELKDSALQEKQMKALVEDSCSELLATIAEYEKRLDAVNYEback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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