Rho_N domain-containing protein
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30030071 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of Rho_N domain-containing protein vs. Ensembl Celegans
Match: ZC53.4 (pep chromosome:WBcel235:X:1925750:1937689:1 gene:WBGene00022511.1 transcript:ZC53.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZC53.4) HSP 1 Score: 185.267 bits (469), Expect = 1.761e-47 Identity = 102/291 (35.05%), Postives = 170/291 (58.42%), Query Frame = 3
Query: 1230 LADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGL-------TFVNKHYIAASEDTEL----LYIDINNLYGWALSQSLPYADFTW-------VYDGLDEVLSECANVVD-IEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSII 2045
+AD F+ FRA ++ L+P ++ PG++W + L + ++ L D+EM+ E GIRGG+ + VN Y + +L LY+D NNLYGWA+ Q LP DF + + +G EV S+ + ++ ++ L G EVD+E P +H ND P+ PE + N ++KL T + ++ +V+H+ L ++LG +++ IHR I FK++ YI+ NT+ R N K + +D YKL NNS++GK++EN+++R+++RL ++K+ ASKP F++ II
Sbjct: 1117 IADVFENFRALSLRVYQLDPCWYFTSPGLAWDAMLKKTKVELDKLHDVEMYLMIEKGIRGGIVNAVKRYSKVNNKYTKNFNEKQLTNFLLYLDANNLYGWAMCQMLPTGDFKFETQSLISILNGEAEVKSDLKDYINYLKKLDRGCIFEVDLEYPKEIHSRHNDSPLCPENVKIDNHVIKKLCNTLFDREKYVIHYENLLQCLQLGLKLKKIHRIITFKESNWLASYIEMNTNPRKNAKNDFEKDFYKLMNNSVFGKTMENVRERVDVRLVTDEDKIKKLASKPNFKRRII 1407 HSP 2 Score: 80.1073 bits (196), Expect = 5.733e-15 Identity = 63/196 (32.14%), Postives = 96/196 (48.98%), Query Frame = 2
Query: 377 VTPPFVIYADFESIL---------PLDIRHHQIHMPIAAGLLLINNYTNTKQYYN---FIGDDCVLAFLKKIDEIALSIV-LPYYKVHCQKPIGPLSFKEKREFKDCRTCYLCKKFIRDKVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHIL------KYGLNNFSSWELNIIPTTTEKFISL 907
V ++IYADFESI+ P + + +A+ ++ + TK+ +N +IG + L F K I +I+ I+ LP ++ F + +E C+ Y + KV+DH H++G+Y G C CN+ RR +PV FHNL+GYD H I+ KY N E+ I + TEKFIS
Sbjct: 872 VKHRYIIYADFESIIWKFSNAHYKPNESWTMDVGEHVASRFCVVVVDSFTKKIHNMKSYIGYNATLEFNKYIIKISQEIMSLPSVRMKKLTQDEWTEFNKNQECPHCQVQYNTEDMKTTKVRDHDHWTGEYRGPFCGSCNILRRKNNFIPVFFHNLKGYDSHLIVGCLESTKYL--NEHEIEIEKISSNTEKFISF 1065
BLAST of Rho_N domain-containing protein vs. Ensembl Celegans
Match: H12I13.3 (pep chromosome:WBcel235:II:6071386:6073251:-1 gene:WBGene00019192.1 transcript:H12I13.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H12I13.3) HSP 1 Score: 106.686 bits (265), Expect = 1.131e-23 Identity = 73/253 (28.85%), Postives = 120/253 (47.43%), Query Frame = 3
Query: 1788 GAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRDLLYTSNYDPAHPLYSRKLDSVIGNFKDE*GSWVCGMGFLKTQVL*FVKY*RYDEG*WGMKLLGQRLSTSHI*IVLIMT*YSRCL 2546
G +++ IHR + FK++ K+YI NT+LR K + +D +KL NNS++GK++EN++ R+N+RL D+ + KP F+ S II ++L++ L K + D+P Y V+ + + +I + DTDS EV+ + + M ++ S+Y HPLY VIG FKDE G F+K +YD G + + ++ L + + RCL
Sbjct: 299 GLKLKKIHRILTFKESAWMKKYIMLNTNLRKQAKNDFEKDFFKLMNNSVFGKTMENIRNRVNIRLVTDDDSALKLIRKPNFKNSTIITEDLLSVELTKTKLVFDKPIYFHYDVM------------------QKHYGDKIKLCYQDTDSLIYEVETEDIYEDMGNM-KEWFDFSDYPKNHPLYDESNKKVIGKFKDELNGKNMDEGV-------FLKPKQYDFNVEGAEKKKSKGVKKNVTKTLTLDDFKRCL 525
BLAST of Rho_N domain-containing protein vs. TrEMBL
Match: A0A2L2YHT1 (Uncharacterized protein (Fragment) OS=Parasteatoda tepidariorum OX=114398 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 1.406e-105 Identity = 172/469 (36.67%), Postives = 259/469 (55.22%), Query Frame = 3
Query: 1044 KAIFPYDFAKSLEVLESTTELPPIWG--------SVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLT-------FVNKHYIAASEDTE-----LLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRDL--LYTSNYDPAHPLYS--RKLDSVIGNFKDE 2378
K ++PYD+ E TT LPP S+S ++Y A+++W ++ +Y Y+K DV LLAD F+ FR + + L+P ++ PG+SW + L IELL D +M F E GIRGG++ N Y+ AS D+ LLY+D NNLYGWA+SQ LP DF WV D VLS + P G+ EVD++ P NLHD +D P+ PE PP K ++L+ T Y K+ +VLH+R LK Y++ G + +HR ++F Q+P K YI NT LR + E + +KL NN+++GK++EN++ R+N++LC+S++K S+ FR I+ + L+A H+ + I ++P IG VLD+SK+ MY+ Y K + ++ +I ++ DTDSF ++ + + M DL TS+Y P +Y RK V+G KDE
Sbjct: 552 KGVYPYDYIDHESKFEETT-LPPQRAFYSKLNDCSISNEDYKHAEEVWQIFKMSSLGEYSDLYVKTDVLLLADVFENFRDVCMRHYNLDPAWYFTAPGLSWDAMLKKTNISIELLTDYDMILFIESGIRGGISQCSHRYGSANNKYMEASYDSSKPSNYLLYLDANNLYGWAMSQPLPLQDFKWVEPPTD-VLSISDDG------PLGFIFEVDLDYPKNLHDNHSDLPLAPETKIPPGCKDKRLLTTLYHKEKYVLHYRNLKFYLQQGLILRKVHRVLQFSQSPWLKSYIDLNTSLRKDATNEFEKSFFKLMNNAVFGKTMENIRNRVNVKLCSSEKKAEKLISRCNFRDRTILTEQLVAIHMGRTEITFNKPISIGMAVLDISKILMYKFHY---TKMKTKYEEKIKLLYTDTDSFIYDI---TTEDVYSDMNEDLDSFDTSDY-PEDNIYGTPRKNKKVLGVMKDE 1005 HSP 2 Score: 125.176 bits (313), Expect = 1.406e-105 Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = 2
Query: 368 VKTVTP-PFVIYADFESIL-PLD----------IRHHQIHMPIAAGLLLINNYTNTKQYYNFIGDDCVLAFLKKIDEIALSIVLPYYKVHCQKPIGPLSFKEKREFKDCRTCYLC-KKFIRD--KVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYIN-KLPVRFIDSMQFVNSSLAKAVKTLT 997
VK P PFVIYADFES+L P+D +Q H PI+ + +K Y + G D F++K+ E AL I + K + P+ L+ K+ ++++ CY+C +F + KVKDHCH + ++ GA+C CN+ ++ +PV+FHNL GYD H +K N + +N+IP TEK+IS Y++ K+ +RFIDS +F+ SSL + + LT
Sbjct: 310 VKHTQPVPFVIYADFESLLKPIDSCGPSSGASFTEKYQKHEPISFCYYVCGIAGLSKPPYVYRGKDAAKIFMEKMREEALII---HEKYNNPLPMKSLTEKQTQQYESATNCYVCDSEFSVENYKVKDHCHVTQEFRGASCNNCNMQTKVPNFIPVIFHNLSGYDSHLFIKELGKNEEN--INVIPENTEKYISFSEYVSGKIFLRFIDSYRFMASSLDQLARNLT 530
BLAST of Rho_N domain-containing protein vs. TrEMBL
Match: K7JB67 (Uncharacterized protein OS=Nasonia vitripennis OX=7425 PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 2.943e-105 Identity = 170/474 (35.86%), Postives = 262/474 (55.27%), Query Frame = 3
Query: 1035 FRAKAIFPYDFAKSLEVLESTTELPPIW--------GSVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLT------------FVNKHYIAASEDTELLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDI-EILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMI---VYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRDLLYTSNYDPAHPLYS--RKLDSVIGNFKDE 2378
+ K +FPYD+ SL L LP +S ++Y A+++W + N +T+ Y YLK DV LLA+ F+ FR+ + L+P ++Y PG+SW + L Q ++LL D++M F E GIRGG++ ++N+ Y A +++ L+Y D NNLYGWA++++LP F WV D + N ++ + P GY +EVD+E P LH D P E MCPP SK +KLM T Y KKN+V+H+R LK + G ++ IHRA++F+Q+ K YI N+D+R N K E + L+KLFNN++YGK++EN +K + ++L E +KPTF I D+ L+A + + +C+ +P YIG +VLDLSK +Y Y + + R C+ ++ DTDS EV + + ++R I + TS+Y P + + R ++G KDE
Sbjct: 593 LKRKGVFPYDYVSSLAKLNEVN-LPTKEDFFSSLYDAHISDEDYEHAKRVWQELNVQTLGQYSDLYLKTDVILLAEVFENFRSNCLQAYGLDPAHYYTTPGLSWDAMLKYTQVRLDLLTDIDMLMFVERGIRGGISQCCNRYAKANNPYMNEGYDANADEKYLVYYDANNLYGWAMTEALPSGKFKWVAD------LQTPNFFNVPDDGPKGYILEVDLEYPIMLHGAHRDMPFCAEHMCPPGSKQKKLMTTLYDKKNYVIHYRALKQALAHGLRLKKIHRALEFEQSKWLKPYIDLNSDMRKNAKNEFEKMLFKLFNNAVYGKTMENERKHVEVKLVTKWEGRYGAEALIAKPTFHNCTIFDEYLVAVQMFRAEVCIKKPIYIGLSVLDLSKTLIYRFHYDYMLE-RAGDKCK--LLYTDTDSLVYEVSNLNVYEMMRIDIHE-FDTSDY-PVNNQFDMPRVNKKIVGLMKDE 1054 HSP 2 Score: 100.523 bits (249), Expect = 2.943e-105 Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 2
Query: 362 NYVKTVTPPFVIYADFESIL-PLDI--RHHQIHMPIAAGLLLINNYTNT----KQYYNFIGDDC-VLAFLKKIDEIALSIVLPYYKVHCQKPIG--PLSFKEKREFKDCRTCYLCKKFIRDK---VKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYINKLPVRF 940
N+V PFV+YADFE +L P+D R +Q H P + G + ++ +T K Y I +D F+ + +AL + Y + PI L+ ++K EF R C++C K +K V+DHCH +G+Y GAA CN++ + + +PVVFHNL GYD H +K F +P++ +K S + + L F
Sbjct: 380 NFVNRNRVPFVVYADFECLLEPVDDHKRAYQQHKPYSVGYFVKCSFNDTLSVYKSYRQSIEEDTPARWFVNSLHALALELQNMY-----KNPIAMRDLTDQQKLEFSMARKCHICNKPFNEKDAKVRDHCHLTGEYRGAAHNSCNLNYQDSRTIPVVFHNLSGYDAHLFIKEIATCFPGHSFRFMPSSLDKLSSYLTELGMLERVF 580 HSP 3 Score: 51.9878 bits (123), Expect = 2.943e-105 Identity = 33/95 (34.74%), Postives = 46/95 (48.42%), Query Frame = 2
Query: 2468 NEVVGTEIEHQSYLDCFNNDIIFTVPQTRIGMRNHQLFTFKNSKIALTNKVDKRNWV-GRNSSLAFGHYLGVDVIDDE*VTHSPRYESTHSPSYD 2749
+ VV IE Y+ C + I T Q I R H+LFT K KIAL+ + DKR G+ +L +GHY +++DE T + P D
Sbjct: 1089 SSVVKATIEFDDYMTCLQENAILTREQRNIRTRQHKLFTEKEIKIALSARNDKRFLQEGKTDTLPWGHY---SIVEDEQPTAALPVRGLEQPIAD 1180 HSP 4 Score: 21.9422 bits (45), Expect = 2.943e-105 Identity = 10/29 (34.48%), Postives = 14/29 (48.28%), Query Frame = 3
Query: 231 TSCKIQI*VHWCPHCLYGFRLKPKFDKHV 317
TS K +H C CL+ F+ + K H
Sbjct: 327 TSRKHSNKIHLCDRCLHYFQTEEKLASHT 355
BLAST of Rho_N domain-containing protein vs. TrEMBL
Match: A0A224XH84 (Putative dna polymerase type b (Fragment) OS=Panstrongylus lignarius OX=156445 PE=4 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 6.819e-105 Identity = 181/472 (38.35%), Postives = 264/472 (55.93%), Query Frame = 3
Query: 1044 KAIFPYDFAKSLEVLESTTELPP--------IWGSVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLTFVNKHYIAAS-----------EDTELLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYK-ELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRDLLYTSNYDPAHPLYSRKLDSVIGNFKDE*GSWVCG 2399
K +FPYDF S + LE T LP S+S ++Y AQ++W+ NC+T+ DY YL+LD LLAD F+ FR+ + + L+P ++Y +PG+SW + L +ELLQD E F E GIRGGL V+ Y A+ E T + Y D NNLYG+++++ LPY +FTW+ +E+ E A+ + YGY +EVDI+ P LH N P PE + +K KL+ K N+++H+ LK ++ G ++E IHR +KF+Q+ K YI N LR+ +DLYKL+NNS+YGK++EN++ R N++L ++++ +KP+F + +NL+A HL K I DRP +IG ++LDLSK MYE Y L KY + + + DTDSF +K L + MI + L TS+Y HP +S K V+G FKDE CG
Sbjct: 490 KGVFPYDFVTSWDRLE-VTSLPSREDFYNRLTGASISDEDYLHAQKVWSAFNCQTLGDYSDHYLQLDTLLLADCFEHFRSITLNTHQLDPCHYYTLPGLSWDAMLKFTGVRLELLQDYEQIMFIESGIRGGLCQVSHRYCKANNQYLADYNPNLETTYISYQDCNNLYGFSMTKCLPYGEFTWI--SSEELNLETAD----DNGEYGYILEVDIDYPKKLHRLHNSLPFLPETLVV--NKQRKLIPNLNDKHNYIVHYVTLKQALKHGLQIEKIHRILKFRQSNWLKSYIDYNATLRAVATNTFDKDLYKLYNNSVYGKTMENIRNRKNIKLVCDNKQLEKLIAKPSFLDRTLYSENLVAVHLAKTKIKFDRPIFIGMSILDLSKNVMYEYYYDIMLPKYGLD---NLILTYMDTDSFIYYIKTNDLYEDILGMI-EYLDTSDYPVNHPCHSLKNKKVLGKFKDE----ACG 944 HSP 2 Score: 114.775 bits (286), Expect = 6.819e-105 Identity = 82/225 (36.44%), Postives = 118/225 (52.44%), Query Frame = 2
Query: 389 FVIYADFESIL-----------PLDIRHHQ-----IHMPIAAGLLLINNYTNTKQYYNFIGDDCVLAFLKKIDEIALSIVLPYYKVHCQKPIGPLSFKEKREFKDCRTCYLCKK--FIRDK-VKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYINK-LPVRFIDSMQFVNSSLAKAVKTLTDL 1003
FV+YADFESIL + + H+ ++ + +++ TK Y + G + F+K I IA + Y + P+ PLS EK F TCY+C K F DK V DHCH +GK+ GAA KCN+ ++ LPV+ HNL GYD H I+K + + +++IP T EK+IS INK + VRF+D+ +F+ +SL VK L L
Sbjct: 254 FVVYADFESILHPIKKGLVDKFSIPFQKHEAMSFCTYVKFTDDMEEMSSNLPTKPYI-YRGKNAPAHFMKFIKNIAEEVSKIY---KLKTPMIPLSENEKIAFDSATTCYMCNKTFFKNDKKVHDHCHITGKFRGAAHNKCNLRYQVPSVLPVLIHNLSGYDSHFIIKEL--GYDNKRIDVIPHTEEKYISFSKQINKDISVRFLDTFRFMPTSLNNLVKNLPQL 472 HSP 3 Score: 27.7202 bits (60), Expect = 6.819e-105 Identity = 16/54 (29.63%), Postives = 27/54 (50.00%), Query Frame = 2
Query: 2489 IEHQSYLDCFNNDIIFTVPQTRIGMRNHQLFTFKNSKIALTNKVDKRNWVGRNS 2650
I + Y+ C N +I I + HQLFT + +K++L+ D + +G N
Sbjct: 982 IRFKDYVKCLNGNINMRTVVNCIQSKQHQLFTVEINKLSLS-PFDTKRVIGSNG 1034
BLAST of Rho_N domain-containing protein vs. TrEMBL
Match: A0A2L2YHS0 (Uncharacterized protein (Fragment) OS=Parasteatoda tepidariorum OX=114398 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 7.599e-105 Identity = 170/468 (36.32%), Postives = 259/468 (55.34%), Query Frame = 3
Query: 1044 KAIFPYDFAKSLEVLESTTELPPIWG--------SVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLT-------FVNKHYIAASEDTE----LLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRDL--LYTSNYDPAHPLYS--RKLDSVIGNFKDE 2378
K ++PYD+ E TT LPP S+S ++Y A+++W ++ +Y Y+K DV LLAD F+ FR + + L+P ++ PG+SW + L IELL D +M F E GIRGG++ N Y+ A + ++ LLY+D NNLYGWA+SQ LP DF WV D VLS + P G+ EVD++ P NLHD +D P+ PE PP K ++L+ T Y K+ +VLH+R LK Y++ G + +HR ++F Q+P K YI NT LR + E + +KL NN+++GK++EN++ R+N++LC+S++K S+ FR I+ + L+A H+ + I ++P IG VLD+SK+ MY+ Y K + ++ +I ++ DTDSF ++ + + M DL TS+Y P +Y RK V+G KDE
Sbjct: 552 KGVYPYDYIDHESKFEETT-LPPQRAFYSKLNDCSISNEDYKHAEEVWQIFKMSSLGEYSDLYVKTDVLLLADVFENFRDVCMRHYNLDPAWYFTAPGLSWDAMLKKTNISIELLTDYDMILFIESGIRGGISQCSHRYGSANNKYMEAYDSSKSSNYLLYLDANNLYGWAMSQPLPLQDFKWVEPPTD-VLSISDDG------PLGFIFEVDLDYPKNLHDNHSDLPLAPETKIPPGCKDKRLLTTLYHKEKYVLHYRNLKFYLQQGLILRKVHRVLQFSQSPWLKSYIDLNTSLRKDATNEFEKSFFKLMNNAVFGKTMENIRNRVNVKLCSSEKKAEKLISRCNFRDRTILTEQLVAIHMGRTEITFNKPISIGMAVLDISKILMYKFHY---TKMKTKYEEKIKLLYTDTDSFIYDI---TTEDVYSDMNEDLDSFDTSDY-PEDNIYGTPRKNKKVLGVMKDE 1004 HSP 2 Score: 125.176 bits (313), Expect = 7.599e-105 Identity = 83/226 (36.73%), Postives = 127/226 (56.19%), Query Frame = 2
Query: 368 VKTVTP-PFVIYADFESIL-PLD----------IRHHQIHMPIAAGLLLINNYTNTKQYYNFIGDDCVLAFLKKIDEIALSIVLPYYKVHCQKPIGPLSFKEKREFKDCRTCYLC-KKFIRD--KVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYIN-KLPVRFIDSMQFVNSSLAKAVKTLT 997
VK P PFVIYADFES+L P+D +Q H PI+ + +K Y + G D F++K+ E AL I + K + P+ L+ K+ ++++ CY+C +F + KVKDHCH + ++ GA+C CN+ ++ +PV+FHNL GYD H +K N + +N+IP TEK+IS Y++ K+ +RFIDS +F+ SSL + + LT
Sbjct: 310 VKHTQPVPFVIYADFESLLKPIDSCGPSSGASFTEKYQKHEPISFCYYVCGIAGLSKPPYVYRGKDAAKIFMEKMREEALII---HEKYNNPLPMKSLTEKQTQQYESATNCYVCDSEFSVENYKVKDHCHVTQEFRGASCNNCNMQTKVPNFIPVIFHNLSGYDSHLFIKELGKNEEN--INVIPENTEKYISFSEYVSGKIFLRFIDSYRFMASSLDQLARNLT 530
BLAST of Rho_N domain-containing protein vs. TrEMBL
Match: D7GXL4 (Rho_N domain-containing protein OS=Tribolium castaneum OX=7070 GN=TcasGA2_TC006914 PE=4 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.208e-104 Identity = 177/458 (38.65%), Postives = 256/458 (55.90%), Query Frame = 3
Query: 1044 KAIFPYDFAKSLEVLESTTELPPI--------WGSVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYN-TLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLTFVNKHYIAASEDTELLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILP--YGYTMEVDIEIPDNL--HDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRDLLYTSNYDPAHPLYSRKLDSVIGNFKDE 2378
K I+PY++ S E T+LP I +S +E+ A ++W + + ++ YLKLDV LL D F+ FR + + L+P+ +Y PG++W L +ELL D EM+ F+E GIRGG++ + Y A E+T+++YID NNLYGWALSQ LP DF W+ E NV I + GY +EVD+ P +L H+ ND P+ PE PP KVEKL+ Y KKN+++H++ LKLY LG + +HR IKF Q+ Y++ NT+ R K + +D +KL N+ YGKS+++++ + N++L +EK+ +KP F+ I +L A H K + ++P YIGQ VLDLSKL MY Y + K EFN + ++ GDTDSF E+K+ ++ D TS+Y H LYS K VIG FKDE
Sbjct: 775 KGIYPYEYMDSFEKF-FETKLPSIDKFYSSLTKEGISQEEFEHAVKVWKHFKIKNLGEWHDLYLKLDVLLLTDVFENFRDLCLEKSYGLDPVWYYTTPGLAWDCMLKYTSVELELLTDYEMYLFFEKGIRGGISQCSNRYSQADENTQIIYIDANNLYGWALSQKLPEKDFKWL------TCDEIKNVDGILVSDSDTGYVLEVDLAFPVDLAIHNKFNDLPLAPENRIPPGGKVEKLLCHFYDKKNYIIHYKTLKLYKSLGIRITKVHRGIKFTQSNFIAPYVKFNTEQRQKAKNDFEKDFWKLMVNAPYGKSMQSVRNQQNIKLYCDEEKLQKAINKPNFKHRTIFSKHLAAVHNFKTKVLFNKPIYIGQAVLDLSKLLMYNFHYNVIKK---EFNQNVKLLYGDTDSFIYEIKNADFYEFMKNN-PDYFDTSDYPKDHSLYSDKNKKVIGKFKDE 1221 HSP 2 Score: 107.842 bits (268), Expect = 1.208e-104 Identity = 81/238 (34.03%), Postives = 117/238 (49.16%), Query Frame = 2
Query: 362 NYVKTVTPPFVIYADFESIL---------PLDIRHH--QIHMPIAAGLLLINNYTNTKQYYN-FIGDDCVLAFLKKIDEIALSIVLPYYKVHCQKPIGPLSFKEKREFKDCRTCYLCKKFI---RDKVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYINK-----LPVRFIDSMQFVNSSLAKAVKTLTDLPLTD 1015
N + + P+VIY+DFESIL P H Q H+P GL + + Y N + G++ F+K+I E +I Y + KPI + E E++ + CYLC+ KV+DH H++GKY GAAC KCN+ R +P++FHNL YD H +K L S +L +IP EK+IS + + +RFIDS +F+ SSL L L +
Sbjct: 522 NIQRMLRHPYVIYSDFESILKPIPTCEPNPESSYTHKTQFHVPCGYGLYIKSAYNNIDNPLEIYRGEESDKRFIKRITEHTRTI---YKLLKENKPIKDI---ELEEYEKTKICYLCENVFSIENPKVRDHDHYTGKYRGAACRKCNLKYRQPLFIPILFHNLSSYDCHLFIK-NLGEDKS-QLKLIPNNEEKYISFGKILRMDDNGYIELRFIDSFRFLASSLDNLSSNLESSQLRE 751 HSP 3 Score: 32.7278 bits (73), Expect = 1.208e-104 Identity = 22/68 (32.35%), Postives = 35/68 (51.47%), Query Frame = 2
Query: 2474 VVGTEIEHQSYLDCFNNDIIFTVPQTRIGMRNHQLFTFKNSKIALTNKVDKRNWVGRNS-SLAFGHYL 2674
V+ EI + Y +C N + Q I H +FT + K +L+ K DKR + ++ +LA+GH L
Sbjct: 1257 VLKKEISFEDYKNCLFNQKEYFHTQKVIRSHKHDIFTEEVKKKSLSWKDDKRYLLPDSTDTLAYGHVL 1324 HSP 4 Score: 21.9422 bits (45), Expect = 1.208e-104 Identity = 19/67 (28.36%), Postives = 30/67 (44.78%), Query Frame = 3
Query: 144 IYLPFLEDGDNYHYTSVFHLDKLMNCH-AITSCKIQI*VHWCPHCL-YGFRLKPKFDKHVSFWIINQ 338
I L + + DN HY + +L +L+N I K ++C CL Y R + KH + N+
Sbjct: 444 IDLLYFGNKDNNHYCWIKNLSRLLNDQLEINRSK----KYFCRRCLNYSARTEDALKKHQNVCFSNE 506
BLAST of Rho_N domain-containing protein vs. Ensembl Nematostella
Match: EDO46109 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RR56]) HSP 1 Score: 257.299 bits (656), Expect = 2.038e-88 Identity = 160/470 (34.04%), Postives = 250/470 (53.19%), Query Frame = 3
Query: 1044 KAIFPYDFAKSLEVLESTTELPPIWG--------SVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLTFVNKHYIAASE------DTEL-----LYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKEL-AKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRDLLYTSNYDPAHP--LYSRKLDSVIGNFKDE*GS 2387
K +FPYD+ + + L++ +LPP +S ++Y AQ++W TM DY YL+ DV LLAD F+ FR + L+P +Y PG++W +AL + +ELL D +M +E GIRGG++ ++ + A+ D L Y+D NNLYGWA+S+ LP F W+ D+ L E + +EVD+ P +LHD +D+P+ PE + +KV KL+ K +V+H LKLY LG +V +HR I F+++ K YI NT LR+ + +D +KL NNS++GK++EN++ R+++RL ++++ SKP ++ I +NL A H+ K + ++P Y+G +LDLSK MY+ Y + KY D + ++ DTDS E++ + +R + TSNY HP + S +IG FKDE G
Sbjct: 1063 KGVFPYDWFCNFDQLDAI-QLPPKEAFYSTLNDTDISEEDYQHAQKVWETFKMSTMRDYHDLYLESDVLLLADVFENFRDVCLENYGLDPAWYYTAPGLAWDAALKITRVELELLTDCDMLLMFEEGIRGGVSMISTRHSKANNPYMREYDPNLPTKYITYLDANNLYGWAMSKPLPTHGFRWM---TDQELKEWGR--------HPCVVEVDMAYPRHLHDSHDDYPLAPESI--KINKVGKLIPNLNDKTKYVVHHETLKLYESLGLKVTKVHRGITFEESGWLKTYIDLNTSLRAKATNDFEKDFFKLMNNSVFGKTMENIRNRVDIRLITNEKQARKLISKPNYKHRTIFCENLAAIHMRKTRLVFNKPVYLGMCILDLSKNLMYDFHYGYVKPKYGD----KAKLLFTDTDSLMYEIETEDFYKDISGDVRSMFDTSNYPRNHPSGIESGLNKKIIGMFKDETGG 1514 HSP 2 Score: 88.9669 bits (219), Expect = 2.038e-88 Identity = 73/244 (29.92%), Postives = 113/244 (46.31%), Query Frame = 2
Query: 362 NYVKTVTPPFVIYADFESIL-------PLDIR----HHQIHMPIAAGLLLINNYTN-------TKQYYNFIGDDCVLAFLKKIDEIALSIVLPYYKVHCQKPIGPLSFKEKREFKDCRTCYLCK-KFIRDKVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYI--------------NKLPVRFIDSMQFVNSSLAKAVKTL 994
N+ + + PFV+YADFES P + R +Q H P L+ + + ++ +D F++ ++ I Y K K + ++ +++ + + C++C + DKV DHCH +GKY GAA CN+ R K PV+FHNL GYD H +K L S ++N IP EK+IS + K +RFIDS +F+++SL VK L
Sbjct: 803 NFNRKMRVPFVVYADFESFTENIDTCSPDESRSFTKQYQKHKPSGFCYLIKCSIDDGVFSPKLVQRTVQGSAEDVAQLFVESLESDIKEI---YNKFKFPKEV-EMTREDEMNYDNATHCHICGGELGEDKVLDHCHLTGKYRGAAHNACNLRFRAPKFFPVLFHNLSGYDSHLFVK-NLGT-SEGKINCIPNNEEKYISFTKQVVVDRFTNKEGKQVDVKRDIRFIDSFKFMSASLDSLVKNL 1040
BLAST of Rho_N domain-containing protein vs. Ensembl Nematostella
Match: EDO45323 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RT38]) HSP 1 Score: 84.3445 bits (207), Expect = 2.452e-17 Identity = 80/276 (28.99%), Postives = 125/276 (45.29%), Query Frame = 3
Query: 1617 EVDIEIPDNLHDFLNDF-PI-----GPEKMCPPNSKV------------EKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLR----SNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRDLLYTSNYDPAHPLYSRKLDSVIGNFKDE 2378
+VDI P+NL + +F P+ PE++ P + K K +L K +L+ LLK Y+ G EV IH+ IK+ FK + ++ R SN + D YKL NS YGK +E+L+K DE + A + F + + ++ K + ++RP G V L+KLRM E Y L KY D + E ++ DTDS ++ + + LD +++ ++D Y+ N S+ D G FK E
Sbjct: 3 QVDIHAPENLREKFEEFSPLFVVDSVPEELVPEHMKQYQKDTDRKTLKGTKKLLGVTKAKKILLYTPLLKWYLTHGLEVTAIHKIIKYVSGRPFKWFPDEVSNARRDGDSNPALKQLGDTYKLKGNSFYGKMIEDLEKHTKTSYTQ-DEAEVDKAFRSPFFDDLEVINDTYELKERKRQVTINRPYQCGIAVYQLAKLRMLEFYYDFLDKYVDRKDFE--LIQMDTDSLYMALSNENLDEIIKPKLQD-EYSQNGKAEFLSTSKYHDRTPGLFKLE 274
BLAST of Rho_N domain-containing protein vs. Planmine SMEST
Match: SMESG000066165.1 (SMESG000066165.1) HSP 1 Score: 826.624 bits (2134), Expect = 0.000e+0 Identity = 396/448 (88.39%), Postives = 417/448 (93.08%), Query Frame = 3
Query: 1038 RAKAIFPYDFAKSLEVLESTTELPPIWGSVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLTFVNKHYIAASEDTELLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRD-LLYTSNYDPAHPLYSRKLDSVIGNFKDE 2378
+AK IFPYDFA SL+VLEST ELPP W SVS DEYATAQ IWTQQNC TMLDYMLTYLKLDVFLLADYFQQFRAKAIAYN LEPLNFYGIPGMSWASALMTL+EPIELLQDMEMFNFYEGGIRGGLTFVNKH++A+SEDTELLYIDINNLYGWALSQ+LPY DF WV+D L++VLSEC N +IE LPYGYTMEVDI IP+ +H +LNDFP+ PEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQ+PIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNS EKMIVYASKPTF+KSI I D+LIA HLNKDSICLDRPSYIGQ+VLDLSKLRMY+LQY ELAKYR EFNC+INIVAGDTDSFFLEVKHCKLD LL AMIRD LL TSNYDPAHPLYSRKLDSVIG FKDE
Sbjct: 528 KAKGIFPYDFAVSLKVLESTYELPPKWDSVSDDEYATAQLIWTQQNCTTMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNGLEPLNFYGIPGMSWASALMTLKEPIELLQDMEMFNFYEGGIRGGLTFVNKHHVASSEDTELLYIDINNLYGWALSQNLPYGDFVWVHDNLNDVLSECVNA-NIEFLPYGYTMEVDINIPERVHQYLNDFPLAPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQSPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSAEKMIVYASKPTFKKSIKIVDDLIAAHLNKDSICLDRPSYIGQSVLDLSKLRMYQLQYNELAKYRSEFNCDINIVAGDTDSFFLEVKHCKLDILLPAMIRDNLLDTSNYDPAHPLYSRKLDSVIGKFKDE 974 HSP 2 Score: 258.07 bits (658), Expect = 0.000e+0 Identity = 124/171 (72.51%), Postives = 145/171 (84.80%), Query Frame = 2
Query: 548 KKIDEIALSIVLPYYKVHCQKPIGPLSFKEKREFKDCRTCYLCKKFIRDKVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYINKLPVRFIDSMQFVNSSLAKAVKTLTDLPLTDSVFDGAI-*SQGYFP 1057
KK++EIA++IVLPYY+ H +KP+ L+ E+++F CRTCYLCKK IR+KVKDH HF+G+YLGAAC CN++R+I KQLP+VFHNLRGYDLHHILKYGLN F SW+LNIIPTTTEKFISLI I KL VRFIDSMQFVN SLAKAVKTLTDLPLT S FDG I ++G FP
Sbjct: 364 KKVEEIAVTIVLPYYENHGKKPMNNLTSNEEQQFIACRTCYLCKKLIRNKVKDHDHFTGQYLGAACRNCNINRKISKQLPIVFHNLRGYDLHHILKYGLNEFPSWKLNIIPTTTEKFISLIVNIKKLAVRFIDSMQFVNCSLAKAVKTLTDLPLTCSAFDGLIVKAKGIFP 534 HSP 3 Score: 123.635 bits (309), Expect = 2.792e-35 Identity = 58/97 (59.79%), Postives = 76/97 (78.35%), Query Frame = 2
Query: 2465 GNEVVGTEIEHQSYLDCFNNDIIFTVPQTRIGMRNHQLFTFKNSKIALTNKVDKRNWVGRNSSLAFGHYLGVDVI--DDE*VTHSPRYESTHSPSYD 2749
G +++GT+I+HQSYLDC+N +++FTVPQ+RIG RNHQL+TFKNSKIAL+N DKR WVG+N+S+AFGHY GVD I D P + + SPS+D
Sbjct: 1004 GVKLLGTDIKHQSYLDCYNKNVVFTVPQSRIGTRNHQLYTFKNSKIALSNNDDKRLWVGKNTSIAFGHYFGVDAIVSDQVNFLDEPLFGGS-SPSFD 1099 HSP 4 Score: 45.8246 bits (107), Expect = 2.792e-35 Identity = 21/30 (70.00%), Postives = 21/30 (70.00%), Query Frame = 1
Query: 2377 SKDLGYAEWVFLRLKFYSLLNTKDTMRVNG 2466
SK LGY EWVFLR K YSLL DTMR G
Sbjct: 975 SKGLGYKEWVFLRPKCYSLLGKSDTMRAKG 1004
BLAST of Rho_N domain-containing protein vs. Planmine SMEST
Match: SMESG000066165.1 (SMESG000066165.1) HSP 1 Score: 826.239 bits (2133), Expect = 0.000e+0 Identity = 396/448 (88.39%), Postives = 417/448 (93.08%), Query Frame = 3
Query: 1038 RAKAIFPYDFAKSLEVLESTTELPPIWGSVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLTFVNKHYIAASEDTELLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRD-LLYTSNYDPAHPLYSRKLDSVIGNFKDE 2378
+AK IFPYDFA SL+VLEST ELPP W SVS DEYATAQ IWTQQNC TMLDYMLTYLKLDVFLLADYFQQFRAKAIAYN LEPLNFYGIPGMSWASALMTL+EPIELLQDMEMFNFYEGGIRGGLTFVNKH++A+SEDTELLYIDINNLYGWALSQ+LPY DF WV+D L++VLSEC N +IE LPYGYTMEVDI IP+ +H +LNDFP+ PEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQ+PIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNS EKMIVYASKPTF+KSI I D+LIA HLNKDSICLDRPSYIGQ+VLDLSKLRMY+LQY ELAKYR EFNC+INIVAGDTDSFFLEVKHCKLD LL AMIRD LL TSNYDPAHPLYSRKLDSVIG FKDE
Sbjct: 590 KAKGIFPYDFAVSLKVLESTYELPPKWDSVSDDEYATAQLIWTQQNCTTMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNGLEPLNFYGIPGMSWASALMTLKEPIELLQDMEMFNFYEGGIRGGLTFVNKHHVASSEDTELLYIDINNLYGWALSQNLPYGDFVWVHDNLNDVLSECVNA-NIEFLPYGYTMEVDINIPERVHQYLNDFPLAPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQSPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSAEKMIVYASKPTFKKSIKIVDDLIAAHLNKDSICLDRPSYIGQSVLDLSKLRMYQLQYNELAKYRSEFNCDINIVAGDTDSFFLEVKHCKLDILLPAMIRDNLLDTSNYDPAHPLYSRKLDSVIGKFKDE 1036 HSP 2 Score: 270.011 bits (689), Expect = 0.000e+0 Identity = 130/180 (72.22%), Postives = 152/180 (84.44%), Query Frame = 2
Query: 521 GDDCVLAFLKKIDEIALSIVLPYYKVHCQKPIGPLSFKEKREFKDCRTCYLCKKFIRDKVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYINKLPVRFIDSMQFVNSSLAKAVKTLTDLPLTDSVFDGAI-*SQGYFP 1057
G +CVL FLKK++EIA++IVLPYY+ H +KP+ L+ E+++F CRTCYLCKK IR+KVKDH HF+G+YLGAAC CN++R+I KQLP+VFHNLRGYDLHHILKYGLN F SW+LNIIPTTTEKFISLI I KL VRFIDSMQFVN SLAKAVKTLTDLPLT S FDG I ++G FP
Sbjct: 417 GLECVLEFLKKVEEIAVTIVLPYYENHGKKPMNNLTSNEEQQFIACRTCYLCKKLIRNKVKDHDHFTGQYLGAACRNCNINRKISKQLPIVFHNLRGYDLHHILKYGLNEFPSWKLNIIPTTTEKFISLIVNIKKLAVRFIDSMQFVNCSLAKAVKTLTDLPLTCSAFDGLIVKAKGIFP 596 HSP 3 Score: 123.635 bits (309), Expect = 2.933e-35 Identity = 58/97 (59.79%), Postives = 76/97 (78.35%), Query Frame = 2
Query: 2465 GNEVVGTEIEHQSYLDCFNNDIIFTVPQTRIGMRNHQLFTFKNSKIALTNKVDKRNWVGRNSSLAFGHYLGVDVI--DDE*VTHSPRYESTHSPSYD 2749
G +++GT+I+HQSYLDC+N +++FTVPQ+RIG RNHQL+TFKNSKIAL+N DKR WVG+N+S+AFGHY GVD I D P + + SPS+D
Sbjct: 1066 GVKLLGTDIKHQSYLDCYNKNVVFTVPQSRIGTRNHQLYTFKNSKIALSNNDDKRLWVGKNTSIAFGHYFGVDAIVSDQVNFLDEPLFGGS-SPSFD 1161 HSP 4 Score: 45.8246 bits (107), Expect = 2.933e-35 Identity = 21/30 (70.00%), Postives = 21/30 (70.00%), Query Frame = 1
Query: 2377 SKDLGYAEWVFLRLKFYSLLNTKDTMRVNG 2466
SK LGY EWVFLR K YSLL DTMR G
Sbjct: 1037 SKGLGYKEWVFLRPKCYSLLGKSDTMRAKG 1066 HSP 5 Score: 71.633 bits (174), Expect = 3.155e-12 Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 3
Query: 108 IIYCFKFTVGTAIYLPFLEDGDNYHYTSVFHLDKLMNCHAITSCKIQI*VHWCPHCLYGFRLKPKFDKHV 317
+I+ K G I L L+DGDN+HYT++F+L++L+NC + + C +I V WCPHCL G +F K V
Sbjct: 359 LIHRTKVIGGNPINLLLLQDGDNFHYTAIFNLNRLLNCRSSSECNTRIHVKWCPHCLNGLECVLEFLKKV 428
BLAST of Rho_N domain-containing protein vs. Planmine SMEST
Match: SMESG000066165.1 (SMESG000066165.1) HSP 1 Score: 825.854 bits (2132), Expect = 0.000e+0 Identity = 396/448 (88.39%), Postives = 417/448 (93.08%), Query Frame = 3
Query: 1038 RAKAIFPYDFAKSLEVLESTTELPPIWGSVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLTFVNKHYIAASEDTELLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRD-LLYTSNYDPAHPLYSRKLDSVIGNFKDE 2378
+AK IFPYDFA SL+VLEST ELPP W SVS DEYATAQ IWTQQNC TMLDYMLTYLKLDVFLLADYFQQFRAKAIAYN LEPLNFYGIPGMSWASALMTL+EPIELLQDMEMFNFYEGGIRGGLTFVNKH++A+SEDTELLYIDINNLYGWALSQ+LPY DF WV+D L++VLSEC N +IE LPYGYTMEVDI IP+ +H +LNDFP+ PEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQ+PIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNS EKMIVYASKPTF+KSI I D+LIA HLNKDSICLDRPSYIGQ+VLDLSKLRMY+LQY ELAKYR EFNC+INIVAGDTDSFFLEVKHCKLD LL AMIRD LL TSNYDPAHPLYSRKLDSVIG FKDE
Sbjct: 552 KAKGIFPYDFAVSLKVLESTYELPPKWDSVSDDEYATAQLIWTQQNCTTMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNGLEPLNFYGIPGMSWASALMTLKEPIELLQDMEMFNFYEGGIRGGLTFVNKHHVASSEDTELLYIDINNLYGWALSQNLPYGDFVWVHDNLNDVLSECVNA-NIEFLPYGYTMEVDINIPERVHQYLNDFPLAPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQSPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSAEKMIVYASKPTFKKSIKIVDDLIAAHLNKDSICLDRPSYIGQSVLDLSKLRMYQLQYNELAKYRSEFNCDINIVAGDTDSFFLEVKHCKLDILLPAMIRDNLLDTSNYDPAHPLYSRKLDSVIGKFKDE 998 HSP 2 Score: 270.396 bits (690), Expect = 0.000e+0 Identity = 130/180 (72.22%), Postives = 152/180 (84.44%), Query Frame = 2
Query: 521 GDDCVLAFLKKIDEIALSIVLPYYKVHCQKPIGPLSFKEKREFKDCRTCYLCKKFIRDKVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYINKLPVRFIDSMQFVNSSLAKAVKTLTDLPLTDSVFDGAI-*SQGYFP 1057
G +CVL FLKK++EIA++IVLPYY+ H +KP+ L+ E+++F CRTCYLCKK IR+KVKDH HF+G+YLGAAC CN++R+I KQLP+VFHNLRGYDLHHILKYGLN F SW+LNIIPTTTEKFISLI I KL VRFIDSMQFVN SLAKAVKTLTDLPLT S FDG I ++G FP
Sbjct: 379 GLECVLEFLKKVEEIAVTIVLPYYENHGKKPMNNLTSNEEQQFIACRTCYLCKKLIRNKVKDHDHFTGQYLGAACRNCNINRKISKQLPIVFHNLRGYDLHHILKYGLNEFPSWKLNIIPTTTEKFISLIVNIKKLAVRFIDSMQFVNCSLAKAVKTLTDLPLTCSAFDGLIVKAKGIFP 558 HSP 3 Score: 123.635 bits (309), Expect = 2.909e-35 Identity = 58/97 (59.79%), Postives = 76/97 (78.35%), Query Frame = 2
Query: 2465 GNEVVGTEIEHQSYLDCFNNDIIFTVPQTRIGMRNHQLFTFKNSKIALTNKVDKRNWVGRNSSLAFGHYLGVDVI--DDE*VTHSPRYESTHSPSYD 2749
G +++GT+I+HQSYLDC+N +++FTVPQ+RIG RNHQL+TFKNSKIAL+N DKR WVG+N+S+AFGHY GVD I D P + + SPS+D
Sbjct: 1028 GVKLLGTDIKHQSYLDCYNKNVVFTVPQSRIGTRNHQLYTFKNSKIALSNNDDKRLWVGKNTSIAFGHYFGVDAIVSDQVNFLDEPLFGGS-SPSFD 1123 HSP 4 Score: 45.8246 bits (107), Expect = 2.909e-35 Identity = 21/30 (70.00%), Postives = 21/30 (70.00%), Query Frame = 1
Query: 2377 SKDLGYAEWVFLRLKFYSLLNTKDTMRVNG 2466
SK LGY EWVFLR K YSLL DTMR G
Sbjct: 999 SKGLGYKEWVFLRPKCYSLLGKSDTMRAKG 1028
BLAST of Rho_N domain-containing protein vs. Planmine SMEST
Match: SMESG000037212.1 (SMESG000037212.1) HSP 1 Score: 796.579 bits (2056), Expect = 0.000e+0 Identity = 384/447 (85.91%), Postives = 408/447 (91.28%), Query Frame = 3
Query: 1038 RAKAIFPYDFAKSLEVLESTTELPPIWGSVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLTFVNKHYIAASEDTELLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRDLLYTSNYDPAHPLYSRKLDSVIGNFKDE 2378
+AK IFPYDFA SLEVLEST ELPP W SVS DEYATAQ IWTQQNC TMLDYMLTYLKLDVFLLADYFQQFRAKAIAYN LEPLNFYGIPGMSWASALMTL+EPIELLQDMEMFNFYEGGIRGGLTFVNKH++A+SEDTELL+IDINNLYGWALSQ+LPY DF WV+ L++VLSEC N +IE LPYGYTMEVDI IP+ +H +LNDFP+ PEKMCPPNSKVEKLMLTHYSKKNHVLHW+LLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSN+KCEL+RDLYKLFNNSLYGKSVENLKKRMNLRLCNS EKMIVYASKPTF+KSI I D+LIA HLNKDSICLDR SYIGQ+VLDLSKLRMY+LQY ELAKYR EFNC+INIVAGDTDSFFLEVKHCKLD LL AMIRD L + HPLYSRKLDSVIG FKDE
Sbjct: 1145 KAKGIFPYDFAVSLEVLESTYELPPKWDSVSDDEYATAQLIWTQQNCTTMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNGLEPLNFYGIPGMSWASALMTLKEPIELLQDMEMFNFYEGGIRGGLTFVNKHHVASSEDTELLHIDINNLYGWALSQNLPYGDFVWVHYNLNDVLSECVNA-NIEFLPYGYTMEVDINIPERVHQYLNDFPLAPEKMCPPNSKVEKLMLTHYSKKNHVLHWKLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNSKCELHRDLYKLFNNSLYGKSVENLKKRMNLRLCNSAEKMIVYASKPTFKKSIKIVDDLIAAHLNKDSICLDRLSYIGQSVLDLSKLRMYQLQYNELAKYRSEFNCDINIVAGDTDSFFLEVKHCKLDILLPAMIRDSLLDT-----HPLYSRKLDSVIGKFKDE 1585 HSP 2 Score: 126.716 bits (317), Expect = 3.360e-29 Identity = 59/97 (60.82%), Postives = 78/97 (80.41%), Query Frame = 2
Query: 2465 GNEVVGTEIEHQSYLDCFNNDIIFTVPQTRIGMRNHQLFTFKNSKIALTNKVDKRNWVGRNSSLAFGHYLGVDVIDDE*VT--HSPRYESTHSPSYD 2749
G +++GT+I+HQSYLDC+N +++FTVPQ+RIG RNHQL+TFKNSKIAL+N DKR WVG+N+S+AFGHY GVD ID + V P + + SPS+D
Sbjct: 1595 GVKLLGTDIKHQSYLDCYNKNVVFTVPQSRIGTRNHQLYTFKNSKIALSNNDDKRLWVGKNTSIAFGHYFGVDAIDSDQVNFLDEPLFGGS-SPSFD 1690 HSP 3 Score: 67.3958 bits (163), Expect = 5.457e-11 Identity = 37/48 (77.08%), Postives = 39/48 (81.25%), Query Frame = 2
Query: 917 INKLPVRFIDSMQFVNSSLAKAVKTLTDLPLTDSVFDGAI-*SQGYFP 1057
I KL VRFIDSMQFVN SLAKAVKTLTDLPLT S FDG I ++G FP
Sbjct: 1104 IRKLAVRFIDSMQFVNCSLAKAVKTLTDLPLTCSAFDGLIVKAKGIFP 1151 HSP 4 Score: 51.9878 bits (123), Expect = 2.584e-6 Identity = 21/48 (43.75%), Postives = 33/48 (68.75%), Query Frame = 3
Query: 108 IIYCFKFTVGTAIYLPFLEDGDNYHYTSVFHLDKLMNCHAITSCKIQI 251
+I+ K G I L L+DGDNYHYT++F+L++ +NCH+ + C +I
Sbjct: 1057 LIHRTKVIGGNPINLLLLQDGDNYHYTAIFNLNRQLNCHSSSECNTRI 1104
BLAST of Rho_N domain-containing protein vs. Planmine SMEST
Match: SMESG000062279.1 (SMESG000062279.1) HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0 Identity = 385/448 (85.94%), Postives = 402/448 (89.73%), Query Frame = 3
Query: 1038 RAKAIFPYDFAKSLEVLESTTELPPIWGSVSADEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNFYGIPGMSWASALMTLQEPIELLQDMEMFNFYEGGIRGGLTFVNKHYIAASEDTELLYIDINNLYGWALSQSLPYADFTWVYDGLDEVLSECANVVDIEILPYGYTMEVDIEIPDNLHDFLNDFPIGPEKMCPPNSKVEKLMLTHYSKKNHVLHWRLLKLYIELGAEVECIHRAIKFKQAPIFKEYIQRNTDLRSNTKCELYRDLYKLFNNSLYGKSVENLKKRMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLRAMIRD-LLYTSNYDPAHPLYSRKLDSVIGNFKDE 2378
RAKAIFPYDFAKSLEVLESTTELPPIWGSVS DEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNF +E L DMEMFNFYEGGIRGGLTFVNKHY+A+ EDTE LYIDINNLYGWALSQ LPYADF WVYDGLD+VL+EC NV DIEILPYGYTMEVDI+IPD LH+FLNDFPIGPEKMCPPNSKVEKLMLTH+ KKNHVLHWRLL+LY+ LG V +HRAIKFKQAPIF YI +NT LR+ + ELYR+L+KL+NNSLYGKSVENLKK MNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLL AMIRD LL TSNYDPAHPLYSRKLDSVIG FKDE
Sbjct: 1571 RAKAIFPYDFAKSLEVLESTTELPPIWGSVSVDEYATAQQIWTQQNCETMLDYMLTYLKLDVFLLADYFQQFRAKAIAYNTLEPLNF------------------MEFL-DMEMFNFYEGGIRGGLTFVNKHYVASFEDTEFLYIDINNLYGWALSQYLPYADFVWVYDGLDDVLNECMNVADIEILPYGYTMEVDIDIPDYLHNFLNDFPIGPEKMCPPNSKVEKLMLTHWPKKNHVLHWRLLRLYLSLGVNVVKVHRAIKFKQAPIFHAYIDKNTKLRAQSTSELYRNLFKLYNNSLYGKSVENLKKWMNLRLCNSDEKMIVYASKPTFRKSIIIDDNLIATHLNKDSICLDRPSYIGQTVLDLSKLRMYELQYKELAKYRDEFNCEINIVAGDTDSFFLEVKHCKLDTLLPAMIRDSLLDTSNYDPAHPLYSRKLDSVIGKFKDE 1999 HSP 2 Score: 462.225 bits (1188), Expect = 0.000e+0 Identity = 217/225 (96.44%), Postives = 223/225 (99.11%), Query Frame = 2
Query: 362 NYVKTVTPPFVIYADFESILPLDIRHHQIHMPIAAGLLLINNYTNTKQYYNFIGDDCVLAFLKKIDEIALSIVLPYYKVHCQKPIGPLSFKEKREFKDCRTCYLCKKFIRDKVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYINKLPVRFIDSMQFVNSSLAKAVKTLTDLPLTDSVFDGAI 1036
N+ K++TPPFVIYADFESILPLDIRHHQIHMPIAAGLLLINNYTNTKQY+NFIGDDCVLAFLKKIDEIALSIVLPYY+VHCQKPIGPLSFKE REFKDCRTCYLCKKFIRDKVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYINKLPVRFIDSMQF+NSSLAKAVKTLTDLPLTDSVFDGAI
Sbjct: 1345 NFAKSITPPFVIYADFESILPLDIRHHQIHMPIAAGLLLINNYTNTKQYFNFIGDDCVLAFLKKIDEIALSIVLPYYEVHCQKPIGPLSFKEDREFKDCRTCYLCKKFIRDKVKDHCHFSGKYLGAACMKCNVSRRIQKQLPVVFHNLRGYDLHHILKYGLNNFSSWELNIIPTTTEKFISLIAYINKLPVRFIDSMQFINSSLAKAVKTLTDLPLTDSVFDGAI 1569 HSP 3 Score: 97.4413 bits (241), Expect = 6.858e-28 Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 2
Query: 2465 GNEVVGTEIEHQSYLDCFNNDIIFTVPQTRIGMRNHQLFTFKNSKIALTNKVDKRN 2632
G +++GTEI+HQSYLDCF ND IFTVPQTRIG RNHQLFTFKN+KIALTN DKRN
Sbjct: 2029 GVKLLGTEIDHQSYLDCFENDTIFTVPQTRIGTRNHQLFTFKNNKIALTNNDDKRN 2084 HSP 4 Score: 47.3654 bits (111), Expect = 6.858e-28 Identity = 22/30 (73.33%), Postives = 23/30 (76.67%), Query Frame = 1
Query: 2377 SKDLGYAEWVFLRLKFYSLLNTKDTMRVNG 2466
SK LGY EWVFLR K YSLL TKD+MR G
Sbjct: 2000 SKGLGYKEWVFLRPKCYSLLGTKDSMRAKG 2029 HSP 5 Score: 122.479 bits (306), Expect = 8.784e-28 Identity = 57/81 (70.37%), Postives = 62/81 (76.54%), Query Frame = 3
Query: 102 FDIIYCFKFTVGTAIYLPFLEDGDNYHYTSVFHLDKLMNCHAITSCKIQI*VHWCPHCLYGFRLKPKFDKHVSFWIINQTG 344
DII+ K T GT IYL LEDGDNYHYT+VF L+KLMNCHA TSC +QI VHWCPHCL GFRLKP FD HV+ NQTG
Sbjct: 1249 LDIIHRSKVTDGTPIYLLLLEDGDNYHYTAVFDLNKLMNCHATTSCNVQISVHWCPHCLNGFRLKPAFDAHVALCSKNQTG 1329 The following BLAST results are available for this feature:
BLAST of Rho_N domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Rho_N domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of Rho_N domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Rho_N domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Rho_N domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Rho_N domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of Rho_N domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of Rho_N domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Rho_N domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Rho_N domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Rho_N domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Rho_N domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Rho_N domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Rho_N domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30030071 ID=SMED30030071|Name=Rho_N domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2908bpback to top protein sequence of SMED30030071-orf-1 >SMED30030071-orf-1 ID=SMED30030071-orf-1|Name=SMED30030071-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=196bp MPIAAGLLLINNYTNTKQYYNFIGDDCVLAFLKKIDEIALSIVLPYYKVHback to top protein sequence of SMED30030071-orf-2 >SMED30030071-orf-2 ID=SMED30030071-orf-2|Name=SMED30030071-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=452bp MVQFRAKAIFPYDFAKSLEVLESTTELPPIWGSVSADEYATAQQIWTQQNback to top Annotated Terms
The following terms have been associated with this transcript:
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