ATP-dependent RNA helicase
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30030038 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 19
Homology
BLAST of ATP-dependent RNA helicase vs. Ensembl Human
Match: DDX43 (DEAD-box helicase 43 [Source:HGNC Symbol;Acc:HGNC:18677]) HSP 1 Score: 384.03 bits (985), Expect = 1.355e-116 Identity = 214/488 (43.85%), Postives = 313/488 (64.14%), Query Frame = 1 Query: 841 NIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFD-KDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL---MKDHQDYR 2292 +K + TK ++ P+ +NFY+E + S M+ E + + + NF T D KD E+ + IPNP F+++F +P+++ I+K FQ+P+PIQ AWPI++ G DLIG+AQTGTGKTL +L+P FIH+ QP + +R P +L+L+PTRELA+Q++ E KY+Y + SV YGG ++ +QI +LK+ +I++ TPGR+ DL+ S +NLK+++YLVLDEAD+MLDMGFE Q++ ++ VR RQTVMTSATWP V R+A +++K P+ V VGTLDL A +VKQ++ +K + L + DK+I+FV+RKA L+ +L L G + +HGD +Q++RE AL+ ++G I+IATD+ASRGLD+ D+T V N+DFP+NIEEYVHR+GRTGRAGRTG + T + +ND A+ELI IL+ A+Q +P+ L + K HQ R Sbjct: 180 GLKWQKTKWADLPPIKKNFYKESTATSAMSKVEADSWRKE------------------NFNITWDDLKDGEK--------RPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLIL----------GNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAERFKAHQQKR 631 HSP 2 Score: 160.229 bits (404), Expect = 2.630e-59 Identity = 85/228 (37.28%), Postives = 127/228 (55.70%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 PI +NFY+E +S E +S+ RK N I DD + + +P P +F++ F +PE+++ IK F+ PTPIQ WP++L G D IG+AQTGTGKTL +++P IH+ Q + R P +L+L+PTRELA+Q+E E K Y ++SVC YGG + QI L+ +I++ TPGR+NDL + +NLK++ + D Sbjct: 193 PIKKNFYKESTATSAMSKVEADSW--RKENFNITW----------------DDLKDGEKRPIP------NPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLD 396 HSP 3 Score: 91.6633 bits (226), Expect = 2.630e-59 Identity = 42/79 (53.16%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 ++YLVLDEAD+MLDMGFEPQ++ I+ D R RQ++MTSATWP V ++A Y+ P+ V VG+LDL+ SS+ N + Sbjct: 390 ITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVA--VSSVKQNII 466
BLAST of ATP-dependent RNA helicase vs. Ensembl Human
Match: DDX53 (DEAD-box helicase 53 [Source:HGNC Symbol;Acc:HGNC:20083]) HSP 1 Score: 339.732 bits (870), Expect = 5.482e-101 Identity = 175/407 (43.00%), Postives = 272/407 (66.83%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYRIN 2298 ++IP P F+++F +PD+L I + +P+PIQ AWPI++ G DLI +AQTGTGKTL++L+P FIH++ QP RE+R GP +L+L+PTRELA+ ++ E KY+Y + S+ YGG ++ QI + + +I++ TPGR+ DL+ + +NL+ ++YLV+DEAD+MLDM FE Q+ ++ VR RQTVMTSATWP V+++AL+++K+P+ V VG L+L A +TVKQ++ +K E + ++ P DK+I+FV++K DL+ + ++ + A +HG+ +Q ++E A++ +SG I+I TD+ SRGLD+ D+T V NYDFP+NI+ YVHRVG GR G+TG + T + + D A ELI+IL A+Q VP+ L + + Y++N Sbjct: 214 RLIPKPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQ----------GISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRANQSVPEDLVVMA---EQYKLN 607 HSP 2 Score: 151.754 bits (382), Expect = 2.493e-56 Identity = 82/228 (35.96%), Postives = 125/228 (54.82%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 P+ +NFY E +S E++ RK N I CD D + ++P KP F++ F ++P++L I + PTPIQ WP+IL G D I +AQTGTGKTL++++P IH++ Q R+ R GP +L+L+PTRELA+ +E+E K Y +KS+C YGG + QI + +I++ TPGR+NDL + +NL+ + + D Sbjct: 173 PVKKNFYIESKATSCMS--EMQVINWRKENFNIT------------CD----DLKSGEKRLIP------KPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVID 376 HSP 3 Score: 90.1225 bits (222), Expect = 2.493e-56 Identity = 39/68 (57.35%), Postives = 55/68 (80.88%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIV 3678 ++YLV+DEAD+MLDM FEPQ+ I+ D R RQ++MTSATWP+ VRQ+AL Y+ +P+ V VG+L+L+ Sbjct: 370 ITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVA 437
BLAST of ATP-dependent RNA helicase vs. Ensembl Human
Match: DDX5 (DEAD-box helicase 5 [Source:HGNC Symbol;Acc:HGNC:2746]) HSP 1 Score: 309.686 bits (792), Expect = 1.398e-90 Identity = 184/466 (39.48%), Postives = 274/466 (58.80%), Query Frame = 1 Query: 889 RNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYH-DIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKD 2277 +NFY+EHP +++ T E E T+ + E + PK PV NF E+ F +++ I +Q F EP+ IQ WP+ ++G D++G+AQTG+GKTL++LLPA +HI QP E+ GP L+L+PTRELA Q+Q +Y + S YGGA K QI L+ EI + TPGR+ D + G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K+ + +N+G L+L+A H + Q V+ +K ++L+ ++ I + E+K I+FV K +C +L ++ R G A IHGD QQER+ L + G I+IATDVASRGLD+ D+ VINYD+P + E+Y+HR+GRT R+ +TG A+TF N++ ++LI +L++A+Q + L QL++D Sbjct: 56 KNFYQEHPDLARRTAQEVE----------------------------TYRRSKEITVRGHNCPK----PVLNFYEANFP-ANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPF-LERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKM---RRDGW-------PAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVED 477 HSP 2 Score: 132.494 bits (332), Expect = 2.921e-49 Identity = 83/229 (36.24%), Postives = 118/229 (51.53%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 +NFY+EHPD+ + +EVE++ R I ++ HN KP+ +F E + ++D+I NF PT IQ GWPV L G D +G+AQTG+GKTL+++LPA++HI Q P R GP L+L+PTRELA Q++ + + +KS C YGGA K QI L EI + TPGR+ D + G NL+ + D Sbjct: 54 FEKNFYQEHPDLARRTAQEVETYR-RSKEITVR--------------GHN----------------CPKPVLNFYEANFP-ANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ--PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248 HSP 3 Score: 85.8853 bits (211), Expect = 2.921e-49 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + + +N+G+L+L S HN L Sbjct: 241 RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALEL------SANHNIL 314
BLAST of ATP-dependent RNA helicase vs. Ensembl Human
Match: DDX5 (DEAD-box helicase 5 [Source:HGNC Symbol;Acc:HGNC:2746]) HSP 1 Score: 309.301 bits (791), Expect = 1.849e-90 Identity = 184/466 (39.48%), Postives = 274/466 (58.80%), Query Frame = 1 Query: 889 RNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYH-DIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKD 2277 +NFY+EHP +++ T E E T+ + E + PK PV NF E+ F +++ I +Q F EP+ IQ WP+ ++G D++G+AQTG+GKTL++LLPA +HI QP E+ GP L+L+PTRELA Q+Q +Y + S YGGA K QI L+ EI + TPGR+ D + G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K+ + +N+G L+L+A H + Q V+ +K ++L+ ++ I + E+K I+FV K +C +L ++ R G A IHGD QQER+ L + G I+IATDVASRGLD+ D+ VINYD+P + E+Y+HR+GRT R+ +TG A+TF N++ ++LI +L++A+Q + L QL++D Sbjct: 56 KNFYQEHPDLARRTAQEVE----------------------------TYRRSKEITVRGHNCPK----PVLNFYEANFP-ANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPF-LERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKM---RRDGW-------PAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVED 477 HSP 2 Score: 132.494 bits (332), Expect = 3.683e-49 Identity = 83/229 (36.24%), Postives = 118/229 (51.53%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 +NFY+EHPD+ + +EVE++ R I ++ HN KP+ +F E + ++D+I NF PT IQ GWPV L G D +G+AQTG+GKTL+++LPA++HI Q P R GP L+L+PTRELA Q++ + + +KS C YGGA K QI L EI + TPGR+ D + G NL+ + D Sbjct: 54 FEKNFYQEHPDLARRTAQEVETYR-RSKEITVR--------------GHN----------------CPKPVLNFYEANFP-ANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ--PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248 HSP 3 Score: 85.5001 bits (210), Expect = 3.683e-49 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + + +N+G+L+L S HN L Sbjct: 241 RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALEL------SANHNIL 314
BLAST of ATP-dependent RNA helicase vs. Ensembl Human
Match: DDX17 (DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]) HSP 1 Score: 311.997 bits (798), Expect = 2.954e-90 Identity = 181/404 (44.80%), Postives = 252/404 (62.38%), Query Frame = 1 Query: 1081 VIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYT-YHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQ 2283 V P PV F + F ++ + Q F EP+PIQC +P+ ++GRD++GIAQTG+GKTLA+LLPA +HI QP E+ GP L+L+PTRELA Q+Q Y + S YGGA K QI L+ EI + TPGR+ D +SG NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +++ Q+NVG L+L+A H + Q V+ +K +L++++ I + E+K IIFV K +C DL + R G A IHGD Q ER+ L RSG I+IATDVASRGLD+ D+ VINYD+P + E+YVHR+GRT R+ G A+TF ++ A ELI++L++A+Q + L QL+ DH+ Sbjct: 165 VCPKPVFAFHHANFPQ-YVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY-LERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM---RRDGW-------PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLV-DHR 555 HSP 2 Score: 130.183 bits (326), Expect = 1.124e-48 Identity = 82/221 (37.10%), Postives = 114/221 (51.58%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY EHP++ L+ EV+ L RK I ++ P KP+ +F + ++D++ +F PTPIQC G+P+ L GRD +GIAQTG+GKTL ++LPA++HI Q P R GP L+L+PTRELA Q++ K +KS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 130 FEKNFYVEHPEVARLTPYEVDE-LRRKKEITVRGGDVCP-----------------------------KPVFAFHHANFPQ-YVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ--PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLR 317 HSP 3 Score: 86.2705 bits (212), Expect = 1.124e-48 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + Q+NVG+L+L S HN L Sbjct: 318 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLEL------SANHNIL 391
BLAST of ATP-dependent RNA helicase vs. Ensembl Celegans
Match: Y54G11A.3 (pep chromosome:WBcel235:II:14276621:14283973:1 gene:WBGene00013214.1 transcript:Y54G11A.3.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y54G11A.3) HSP 1 Score: 363.999 bits (933), Expect = 1.329e-111 Identity = 194/413 (46.97%), Postives = 274/413 (66.34%), Query Frame = 1 Query: 1084 IPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREK-----RQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPED----KIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYRI 2295 IP PV +FE++F + I+ EIRK F++PSPIQ WP+L++G+D IG++QTG+GKTLAFLLPA +HI+ Q EK + P VL+LSPTRELA QI+ EV+KY+Y+ SV YGG + +Q+ + EIV+ TPGR+ DL + GV++L V+Y+VLDEADRMLDMGFE+ + +++ +R R +TSATWP GV+++ + K V G+LDL +C +V Q E+V + + R+ EI+ + K+IIFV K L+ + +K + + +HG Q +REM+L M+RSG I++ATD+ASRG+D+PD+T V+NYDFP +IEEYVHRVGRTGRAGR GEA +F+ ND SN LI+IL+ ++QEVPD QL +D + YR+ Sbjct: 78 IPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPHDSRFLRVCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMK----------GINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPD---QLRRDAEKYRL 477 HSP 2 Score: 152.91 bits (385), Expect = 9.783e-39 Identity = 89/233 (38.20%), Postives = 131/233 (56.22%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKP-----RQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 PI R+ Y+ + +NLS E+++ L +M K +P + +E V++ P P+ SFE+ F + I+ I+ FE P+PIQ WP++L G+D IG++QTG+GKTL F+LPAL+HI+ Q+ + + P VL+LSPTRELA QIE E+ K Y+ KSVC YGG + Q+ + R EIV+ TPGR+ DL G ++L V + D Sbjct: 35 PIVRDLYKIPNEQKNLSPEQLQE-LYTNGGVM----KVYPFR------------EESTVKIPP-------PVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLD 243 HSP 3 Score: 70.0922 bits (170), Expect = 8.415e-12 Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 3457 LLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 ++ + V+Y+VLDEADRMLDMGFE + I+ + R R +TSATWPE VR++ Y V GSLDL Sbjct: 231 VISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDL 302
BLAST of ATP-dependent RNA helicase vs. Ensembl Celegans
Match: ddx-17 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q9XUW5]) HSP 1 Score: 310.457 bits (794), Expect = 5.996e-92 Identity = 191/466 (40.99%), Postives = 273/466 (58.58%), Query Frame = 1 Query: 871 NFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFL 2259 N P+ ++FY E+ +VS+ +E++ +D+ + G +P PV F E+ P + E+ KFQ+P+ IQ I+WPI M+GRD+I IA+TG+GKTLAF+LPA +HI Q R++ +GP VL+L PTRELA Q+Q + + + C +GGA K Q L+ +IVV TPGR+ D D+G N+K SYLVLDEADRMLDMGFE Q+ +I +R RQT+M SATWP V+ +A K+ +NVG+L+L A H + Q V+ ++ H K +L+E+L HI + E K IIFV K + +L ++R G C IHGD +Q ER+ L+ ++G IM+ATDVA+RGLD+ D+ VINYD+P N E+YVHR+GRTGR+ + G A+TF + S A +L+++L +A Q VP L Sbjct: 86 NLTPIEKDFYHENAAVSR-----REQYEIDQWVSANQVTLEGRG---------------------------VPRPVFEFNEAPL--PGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAH-RQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRA--MRRD-------GWPTLC-IHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQAL 506 HSP 2 Score: 118.242 bits (295), Expect = 7.372e-45 Identity = 66/155 (42.58%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 2960 GIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYH-NIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 G+ +P+ F E P + + F+ PT IQ I WP+ + GRD I IA+TG+GKTL F+LPAL+HI Q RQ GP VL+L PTRELA Q++ + + +K C +GGA K Q L +IVV TPGR+ D + G N+K Sbjct: 124 GVPRPVFEFNEA--PLPGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAH-RQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMK 275 HSP 3 Score: 84.3445 bits (207), Expect = 7.372e-45 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 K SYLVLDEADRMLDMGFEPQ+ II R RQ++M SATWP+ VR +A + + +NVGSL+L + Sbjct: 276 KCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAAN 345
BLAST of ATP-dependent RNA helicase vs. Ensembl Celegans
Match: ddx-17 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q9XUW5]) HSP 1 Score: 310.457 bits (794), Expect = 5.996e-92 Identity = 191/466 (40.99%), Postives = 273/466 (58.58%), Query Frame = 1 Query: 871 NFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFL 2259 N P+ ++FY E+ +VS+ +E++ +D+ + G +P PV F E+ P + E+ KFQ+P+ IQ I+WPI M+GRD+I IA+TG+GKTLAF+LPA +HI Q R++ +GP VL+L PTRELA Q+Q + + + C +GGA K Q L+ +IVV TPGR+ D D+G N+K SYLVLDEADRMLDMGFE Q+ +I +R RQT+M SATWP V+ +A K+ +NVG+L+L A H + Q V+ ++ H K +L+E+L HI + E K IIFV K + +L ++R G C IHGD +Q ER+ L+ ++G IM+ATDVA+RGLD+ D+ VINYD+P N E+YVHR+GRTGR+ + G A+TF + S A +L+++L +A Q VP L Sbjct: 86 NLTPIEKDFYHENAAVSR-----REQYEIDQWVSANQVTLEGRG---------------------------VPRPVFEFNEAPL--PGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAH-RQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRA--MRRD-------GWPTLC-IHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQAL 506 HSP 2 Score: 118.242 bits (295), Expect = 7.372e-45 Identity = 66/155 (42.58%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 2960 GIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYH-NIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 G+ +P+ F E P + + F+ PT IQ I WP+ + GRD I IA+TG+GKTL F+LPAL+HI Q RQ GP VL+L PTRELA Q++ + + +K C +GGA K Q L +IVV TPGR+ D + G N+K Sbjct: 124 GVPRPVFEFNEA--PLPGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAH-RQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMK 275 HSP 3 Score: 84.3445 bits (207), Expect = 7.372e-45 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 K SYLVLDEADRMLDMGFEPQ+ II R RQ++M SATWP+ VR +A + + +NVGSL+L + Sbjct: 276 KCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAAN 345
BLAST of ATP-dependent RNA helicase vs. Ensembl Celegans
Match: ddx-17 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q9XUW5]) HSP 1 Score: 310.457 bits (794), Expect = 5.996e-92 Identity = 191/466 (40.99%), Postives = 273/466 (58.58%), Query Frame = 1 Query: 871 NFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFL 2259 N P+ ++FY E+ +VS+ +E++ +D+ + G +P PV F E+ P + E+ KFQ+P+ IQ I+WPI M+GRD+I IA+TG+GKTLAF+LPA +HI Q R++ +GP VL+L PTRELA Q+Q + + + C +GGA K Q L+ +IVV TPGR+ D D+G N+K SYLVLDEADRMLDMGFE Q+ +I +R RQT+M SATWP V+ +A K+ +NVG+L+L A H + Q V+ ++ H K +L+E+L HI + E K IIFV K + +L ++R G C IHGD +Q ER+ L+ ++G IM+ATDVA+RGLD+ D+ VINYD+P N E+YVHR+GRTGR+ + G A+TF + S A +L+++L +A Q VP L Sbjct: 86 NLTPIEKDFYHENAAVSR-----REQYEIDQWVSANQVTLEGRG---------------------------VPRPVFEFNEAPL--PGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAH-RQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRA--MRRD-------GWPTLC-IHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQAL 506 HSP 2 Score: 118.242 bits (295), Expect = 7.372e-45 Identity = 66/155 (42.58%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 2960 GIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYH-NIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 G+ +P+ F E P + + F+ PT IQ I WP+ + GRD I IA+TG+GKTL F+LPAL+HI Q RQ GP VL+L PTRELA Q++ + + +K C +GGA K Q L +IVV TPGR+ D + G N+K Sbjct: 124 GVPRPVFEFNEA--PLPGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAH-RQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMK 275 HSP 3 Score: 84.3445 bits (207), Expect = 7.372e-45 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 K SYLVLDEADRMLDMGFEPQ+ II R RQ++M SATWP+ VR +A + + +NVGSL+L + Sbjct: 276 KCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAAN 345
BLAST of ATP-dependent RNA helicase vs. Ensembl Celegans
Match: ddx-17 (DEAD boX helicase homolog [Source:UniProtKB/TrEMBL;Acc:Q9XUW5]) HSP 1 Score: 310.457 bits (794), Expect = 5.996e-92 Identity = 191/466 (40.99%), Postives = 273/466 (58.58%), Query Frame = 1 Query: 871 NFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFL 2259 N P+ ++FY E+ +VS+ +E++ +D+ + G +P PV F E+ P + E+ KFQ+P+ IQ I+WPI M+GRD+I IA+TG+GKTLAF+LPA +HI Q R++ +GP VL+L PTRELA Q+Q + + + C +GGA K Q L+ +IVV TPGR+ D D+G N+K SYLVLDEADRMLDMGFE Q+ +I +R RQT+M SATWP V+ +A K+ +NVG+L+L A H + Q V+ ++ H K +L+E+L HI + E K IIFV K + +L ++R G C IHGD +Q ER+ L+ ++G IM+ATDVA+RGLD+ D+ VINYD+P N E+YVHR+GRTGR+ + G A+TF + S A +L+++L +A Q VP L Sbjct: 86 NLTPIEKDFYHENAAVSR-----REQYEIDQWVSANQVTLEGRG---------------------------VPRPVFEFNEAPL--PGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAH-RQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKECKTIIFVETKRKADELTRA--MRRD-------GWPTLC-IHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQAL 506 HSP 2 Score: 118.242 bits (295), Expect = 7.372e-45 Identity = 66/155 (42.58%), Postives = 89/155 (57.42%), Query Frame = 2 Query: 2960 GIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYH-NIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 G+ +P+ F E P + + F+ PT IQ I WP+ + GRD I IA+TG+GKTL F+LPAL+HI Q RQ GP VL+L PTRELA Q++ + + +K C +GGA K Q L +IVV TPGR+ D + G N+K Sbjct: 124 GVPRPVFEFNEA--PLPGQIHELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAH-RQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMK 275 HSP 3 Score: 84.3445 bits (207), Expect = 7.372e-45 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 K SYLVLDEADRMLDMGFEPQ+ II R RQ++M SATWP+ VR +A + + +NVGSL+L + Sbjct: 276 KCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAAN 345
BLAST of ATP-dependent RNA helicase vs. Ensembl Fly
Match: CG7878 (gene:FBgn0037549 transcript:FBtr0113205) HSP 1 Score: 414.846 bits (1065), Expect = 2.071e-127 Identity = 231/480 (48.12%), Postives = 311/480 (64.79%), Query Frame = 1 Query: 838 ANIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYV-DYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMK 2274 A+I + S P+ +NFY+E P V+ +T E E+ + N + ++ +P+E PIP NPV FE+ F ++PD+L EI K F +PSPIQ AWPIL+ G D+IGIAQTGTGKTLAFLLP IH E Q PR R G VL+L+PTRELA+QI+ EV+KY++ + +V YGG ++ QI L+ EI++ TPGR+ DL + V+++ ++YLVLDEADRMLDMGFE Q+ ++ +R RQT+MTSATWP GV+R+A ++MKNP+QV VG+LDL A H+VKQ ++ + D DK + + ++ DKIIIF RK + DL+ EL L G + C IHG+ DQ +RE A+ ++SG I++ATDVASRGLDI D+T VINYDFP NIEEYVHRVGRTGRAGR G + +F + D + A ELI ILQ+A+QEVPD L + + Sbjct: 216 ASIAATAARWSKCPPLTKNFYKEAPEVANLTKSEIERIREEN-----------------NKITVSYVFEPKEGETSPPIP----NPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKYSFRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTL---------DGFMTQC-IHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMAR 664 HSP 2 Score: 181.415 bits (459), Expect = 9.559e-47 Identity = 89/228 (39.04%), Postives = 133/228 (58.33%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 P+ +NFY+E P++ NL+ E+E N I + + F+ + E P P P+ +FE+ F ++P++L+ I + F P+PIQ WP++L G D IGIAQTGTGKTL F+LP +IH E Q PR R G VL+L+PTRELA+QIE E+ K + +K+VC YGG + QI+ L EI++ TPGR+NDL++ +++ + + D Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYV-----------------FEPKEGETSPPIP---NPVWTFEQCFAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKYSFRGMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLD 437 HSP 3 Score: 100.138 bits (248), Expect = 7.042e-21 Identity = 45/77 (58.44%), Postives = 59/77 (76.62%), Query Frame = 1 Query: 3451 VDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 +++ + ++YLVLDEADRMLDMGFEPQ+ ++ D R RQ+IMTSATWP VR++A YM NP+QV VGSLDL + Sbjct: 423 ANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAAT 499
BLAST of ATP-dependent RNA helicase vs. Ensembl Fly
Match: Rm62 (gene:FBgn0003261 transcript:FBtr0302597) HSP 1 Score: 324.324 bits (830), Expect = 1.867e-96 Identity = 189/487 (38.81%), Postives = 285/487 (58.52%), Query Frame = 1 Query: 841 NIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPD-ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI----KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQ 2283 ++ M+ SN P +NFY+EHP+V+ + E +++ EE EI + +PNP+++F E PD ++ EIR+Q ++ P+ IQ WPI M+G + +GIA+TG+GKTL ++LPA +HI Q +P ++ GP L+L+PTRELA QIQ ++ C +GGA K Q+ L+ EIV+ TPGR+ D +G NLK +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A + N +Q+N+G+L+L+A H ++Q V+ D K ++L +L+ I + KIIIFV K + +L + RS G V+ IHGD Q ER+ L+ RSG NI++ATDVA+RGLD+ + VIN+D+P+N E+Y+HR+GRTGR+ G +F F KN+ A L+ +L++A+QE+ L L ++ + Sbjct: 87 DLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYR-------------------------------EE--QEITVRGQVPNPIQDFSEVHL--PDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ-QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNL---VRFIRSFG-------VRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNSR 527 HSP 2 Score: 134.806 bits (338), Expect = 5.831e-51 Identity = 79/226 (34.96%), Postives = 121/226 (53.54%), Query Frame = 2 Query: 2756 IYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIE---SEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 + P +NFY+EHP++ N S EV+ + +E ++ V P PI+ F E+ P+ ++ I+ ++ PT IQ GWP+ + G +F+GIA+TG+GKTL ++LPA++HI Q +P Q GP L+L+PTRELA QI+ +E Y +++ C +GGA K Q+ L+ EIV+ TPGR+ D + G NLK Sbjct: 98 LAPFKKNFYQEHPNVANRSPYEVQRYR-----------------------------EEQEITVRGQVP---NPIQDFSEVHL--PDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ-QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSY--VRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLK 286 HSP 3 Score: 88.1965 bits (217), Expect = 5.831e-51 Identity = 38/67 (56.72%), Postives = 54/67 (80.60%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ V+Q+A ++ N +Q+N+GSL+L Sbjct: 287 RCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLEL 353
BLAST of ATP-dependent RNA helicase vs. Ensembl Fly
Match: Rm62 (gene:FBgn0003261 transcript:FBtr0078653) HSP 1 Score: 324.324 bits (830), Expect = 1.867e-96 Identity = 189/487 (38.81%), Postives = 285/487 (58.52%), Query Frame = 1 Query: 841 NIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPD-ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI----KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQ 2283 ++ M+ SN P +NFY+EHP+V+ + E +++ EE EI + +PNP+++F E PD ++ EIR+Q ++ P+ IQ WPI M+G + +GIA+TG+GKTL ++LPA +HI Q +P ++ GP L+L+PTRELA QIQ ++ C +GGA K Q+ L+ EIV+ TPGR+ D +G NLK +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A + N +Q+N+G+L+L+A H ++Q V+ D K ++L +L+ I + KIIIFV K + +L + RS G V+ IHGD Q ER+ L+ RSG NI++ATDVA+RGLD+ + VIN+D+P+N E+Y+HR+GRTGR+ G +F F KN+ A L+ +L++A+QE+ L L ++ + Sbjct: 87 DLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYR-------------------------------EE--QEITVRGQVPNPIQDFSEVHL--PDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ-QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNL---VRFIRSFG-------VRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNSR 527 HSP 2 Score: 134.806 bits (338), Expect = 5.831e-51 Identity = 79/226 (34.96%), Postives = 121/226 (53.54%), Query Frame = 2 Query: 2756 IYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIE---SEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 + P +NFY+EHP++ N S EV+ + +E ++ V P PI+ F E+ P+ ++ I+ ++ PT IQ GWP+ + G +F+GIA+TG+GKTL ++LPA++HI Q +P Q GP L+L+PTRELA QI+ +E Y +++ C +GGA K Q+ L+ EIV+ TPGR+ D + G NLK Sbjct: 98 LAPFKKNFYQEHPNVANRSPYEVQRYR-----------------------------EEQEITVRGQVP---NPIQDFSEVHL--PDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ-QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSY--VRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLK 286 HSP 3 Score: 88.1965 bits (217), Expect = 5.831e-51 Identity = 38/67 (56.72%), Postives = 54/67 (80.60%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ V+Q+A ++ N +Q+N+GSL+L Sbjct: 287 RCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLEL 353
BLAST of ATP-dependent RNA helicase vs. Ensembl Fly
Match: Rm62 (gene:FBgn0003261 transcript:FBtr0301947) HSP 1 Score: 323.939 bits (829), Expect = 2.008e-96 Identity = 189/487 (38.81%), Postives = 285/487 (58.52%), Query Frame = 1 Query: 841 NIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPD-ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI----KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQ 2283 ++ M+ SN P +NFY+EHP+V+ + E +++ EE EI + +PNP+++F E PD ++ EIR+Q ++ P+ IQ WPI M+G + +GIA+TG+GKTL ++LPA +HI Q +P ++ GP L+L+PTRELA QIQ ++ C +GGA K Q+ L+ EIV+ TPGR+ D +G NLK +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A + N +Q+N+G+L+L+A H ++Q V+ D K ++L +L+ I + KIIIFV K + +L + RS G V+ IHGD Q ER+ L+ RSG NI++ATDVA+RGLD+ + VIN+D+P+N E+Y+HR+GRTGR+ G +F F KN+ A L+ +L++A+QE+ L L ++ + Sbjct: 84 DLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYR-------------------------------EE--QEITVRGQVPNPIQDFSEVHL--PDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ-QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNL---VRFIRSFG-------VRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNSR 524 HSP 2 Score: 135.191 bits (339), Expect = 5.458e-51 Identity = 79/226 (34.96%), Postives = 121/226 (53.54%), Query Frame = 2 Query: 2756 IYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIE---SEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 + P +NFY+EHP++ N S EV+ + +E ++ V P PI+ F E+ P+ ++ I+ ++ PT IQ GWP+ + G +F+GIA+TG+GKTL ++LPA++HI Q +P Q GP L+L+PTRELA QI+ +E Y +++ C +GGA K Q+ L+ EIV+ TPGR+ D + G NLK Sbjct: 95 LAPFKKNFYQEHPNVANRSPYEVQRYR-----------------------------EEQEITVRGQVP---NPIQDFSEVHL--PDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ-QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSY--VRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLK 283 HSP 3 Score: 88.1965 bits (217), Expect = 5.458e-51 Identity = 38/67 (56.72%), Postives = 54/67 (80.60%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ V+Q+A ++ N +Q+N+GSL+L Sbjct: 284 RCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLEL 350
BLAST of ATP-dependent RNA helicase vs. Ensembl Fly
Match: Rm62 (gene:FBgn0003261 transcript:FBtr0078650) HSP 1 Score: 323.939 bits (829), Expect = 2.008e-96 Identity = 189/487 (38.81%), Postives = 285/487 (58.52%), Query Frame = 1 Query: 841 NIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPD-ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI----KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQ 2283 ++ M+ SN P +NFY+EHP+V+ + E +++ EE EI + +PNP+++F E PD ++ EIR+Q ++ P+ IQ WPI M+G + +GIA+TG+GKTL ++LPA +HI Q +P ++ GP L+L+PTRELA QIQ ++ C +GGA K Q+ L+ EIV+ TPGR+ D +G NLK +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A + N +Q+N+G+L+L+A H ++Q V+ D K ++L +L+ I + KIIIFV K + +L + RS G V+ IHGD Q ER+ L+ RSG NI++ATDVA+RGLD+ + VIN+D+P+N E+Y+HR+GRTGR+ G +F F KN+ A L+ +L++A+QE+ L L ++ + Sbjct: 84 DLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYR-------------------------------EE--QEITVRGQVPNPIQDFSEVHL--PDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ-QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNL---VRFIRSFG-------VRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNSR 524 HSP 2 Score: 135.191 bits (339), Expect = 5.458e-51 Identity = 79/226 (34.96%), Postives = 121/226 (53.54%), Query Frame = 2 Query: 2756 IYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIE---SEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 + P +NFY+EHP++ N S EV+ + +E ++ V P PI+ F E+ P+ ++ I+ ++ PT IQ GWP+ + G +F+GIA+TG+GKTL ++LPA++HI Q +P Q GP L+L+PTRELA QI+ +E Y +++ C +GGA K Q+ L+ EIV+ TPGR+ D + G NLK Sbjct: 95 LAPFKKNFYQEHPNVANRSPYEVQRYR-----------------------------EEQEITVRGQVP---NPIQDFSEVHL--PDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ-QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSY--VRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLK 283 HSP 3 Score: 88.1965 bits (217), Expect = 5.458e-51 Identity = 38/67 (56.72%), Postives = 54/67 (80.60%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ V+Q+A ++ N +Q+N+GSL+L Sbjct: 284 RCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLEL 350
BLAST of ATP-dependent RNA helicase vs. Ensembl Zebrafish
Match: ddx43 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]) HSP 1 Score: 398.282 bits (1022), Expect = 4.220e-121 Identity = 202/405 (49.88%), Postives = 289/405 (71.36%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYR 2292 + IPNPV FEE+F +P I+ I + F++P+PIQ AWP+++ G DLIGIAQTGTGKTLA+LLP FIH++GQP PR+KR GP +L+L+PTRELA+QI+ E KY+Y S+ YGG D+ QI + +IV+ TPGR+ DL+ + ++NL+ ++YLVLDEADRMLDMGFE Q++ +I +R RQTVMTSATWP GV+R+A +++K+P+ V VGTLDL A +TV+Q V +V +K + + + ++P DK++IFV +K + DL+ +L L+ + +HGD +Q +RE AL+ + G I++ATD+ASRGLD+ D+T V NYDFP+N+EEYVHRVGRTGRAGR+GE+ T + + D AAELI IL+ + Q+VP+ L + + ++ +R Sbjct: 270 RTIPNPVCTFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGFIHMDGQPMPRDKRNGPGMLVLTPTRELALQIEAECNKYSYKGFKSICIYGGGDRNAQIKVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDFIHRMEPLDKVLIFVGKKLKADDLSSDLCLQ----------GIAVQSLHGDREQCDREEALQDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTREDWRVAAELITILERSGQDVPEELVLMAERYEKHR 664 HSP 2 Score: 177.178 bits (448), Expect = 3.634e-45 Identity = 93/227 (40.97%), Postives = 130/227 (57.27%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 + +NFY E + S EEV+ + NNI + +LK D D+ I P+ +FEE F +P I++ I + F+ PTPIQ WPV+L G D IGIAQTGTGKTL ++LP IH++GQ PR R GP +L+L+PTRELA+QIE+E K Y KS+C YGG ++ QI + +IV+ TPGR+NDL + +NL+ + + D Sbjct: 230 LKKNFYIEAKSVAARSAEEVKIWRKENNNIFVDDLK--------DGDKRT----------------IPNPVCTFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGFIHMDGQPMPRDKRNGPGMLVLTPTRELALQIEAECNKYSYKGFKSICIYGGGDRNAQIKVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLD 432 HSP 3 Score: 95.1301 bits (235), Expect = 3.425e-19 Identity = 43/73 (58.90%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 3454 DLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 +L+ + ++YLVLDEADRMLDMGFEPQ++ II D R RQ++MTSATWP VR++A Y+ +P+ V VG+LDL Sbjct: 419 ELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDL 491
BLAST of ATP-dependent RNA helicase vs. Ensembl Zebrafish
Match: ddx5 (DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]) HSP 1 Score: 310.842 bits (795), Expect = 1.065e-92 Identity = 177/401 (44.14%), Postives = 252/401 (62.84%), Query Frame = 1 Query: 1087 PNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDH 2280 P P+ F E+ F ++ I KQ + +P+PIQ WP+ ++G+D++GIAQTG+GKTL++LLPA +HI QP E GP L+L+PTRELA Q+Q +Y I S YGGA K QI L+ EI + TPGR+ D ++G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K +Q+NVG L L+A H + Q V+ + +K +L+ +L I + E+K IIFV K +C DL + R G A IHGD +QQER+ L + G I+IATDVASRGLD+ D+ VIN+D+P N E+Y+HR+GRT R+ +TG A+TF N+M A +L+ +L++A+Q + L Q+ +D Sbjct: 92 PKPIVKFHEANFPK-YVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPF-LEHGDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRM---RRDGW-------PAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMAEDR 480 HSP 2 Score: 138.658 bits (348), Expect = 1.556e-51 Identity = 87/221 (39.37%), Postives = 118/221 (53.39%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEM-FWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY+E+PD+ S +EVE + R I +K G G KPI F E F K+ ++D+I N+ PTPIQ GWPV L G+D +GIAQTG+GKTL+++LPA++HI Q ++ GP L+L+PTRELA Q++ + K IKS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 56 FEKNFYQENPDVARRSAQEVEHYR-RSKEITVK-----------------------------GRDG-PKPIVKFHEANFPKY--VMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQ-PFLEHGDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR 242 HSP 3 Score: 87.0409 bits (214), Expect = 1.556e-51 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ +Q+NVG+L L S HN L Sbjct: 243 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQL------SANHNIL 316
BLAST of ATP-dependent RNA helicase vs. Ensembl Zebrafish
Match: ddx5 (DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]) HSP 1 Score: 308.916 bits (790), Expect = 1.497e-90 Identity = 176/397 (44.33%), Postives = 250/397 (62.97%), Query Frame = 1 Query: 1087 PNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 P P+ F E+ F ++ I KQ + +P+PIQ WP+ ++G+D++GIAQTG+GKTL++LLPA +HI QP E GP L+L+PTRELA Q+Q +Y I S YGGA K QI L+ EI + TPGR+ D ++G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K +Q+NVG L L+A H + Q V+ + +K +L+ +L I + E+K IIFV K +C DL + R G A IHGD +QQER+ L + G I+IATDVASRGLD+ D+ VIN+D+P N E+Y+HR+GRT R+ +TG A+TF N+M A +L+ +L++A+Q + L Q+ Sbjct: 92 PKPIVKFHEANFPK-YVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPF-LEHGDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDDLTRRM---RRDGW-------PAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQM 476 HSP 2 Score: 138.658 bits (348), Expect = 1.566e-51 Identity = 87/221 (39.37%), Postives = 118/221 (53.39%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEM-FWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY+E+PD+ S +EVE + R I +K G G KPI F E F K+ ++D+I N+ PTPIQ GWPV L G+D +GIAQTG+GKTL+++LPA++HI Q ++ GP L+L+PTRELA Q++ + K IKS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 56 FEKNFYQENPDVARRSAQEVEHYR-RSKEITVK-----------------------------GRDG-PKPIVKFHEANFPKY--VMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQ-PFLEHGDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR 242 HSP 3 Score: 87.0409 bits (214), Expect = 1.566e-51 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ +Q+NVG+L L S HN L Sbjct: 243 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQL------SANHNIL 316
BLAST of ATP-dependent RNA helicase vs. Ensembl Zebrafish
Match: DDX17 (si:dkey-156n14.5 [Source:ZFIN;Acc:ZDB-GENE-030131-18]) HSP 1 Score: 304.294 bits (778), Expect = 2.636e-88 Identity = 175/398 (43.97%), Postives = 250/398 (62.81%), Query Frame = 1 Query: 1087 PNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLM 2271 P PV NF ++ F ++ + +Q F+EP+ IQ +P+ ++GRD++GIAQTG+GKTLA+LLPA +HI QP E+ GP L+L+PTRELA Q+Q Y I S YGGA K QI L+ EI + TPGR+ D + G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +++ VQ+N+G L+L+A H + Q V+ ++K +L++++ I + E+K IIFV K +C +L + R G A IHGD Q ER+ L RSG I+IATDVASRGLD+ D+ VINYD+P + E+YVHR+GRT R+ G A+TF ++ A +L+R+L++A Q + L QL+ Sbjct: 91 PKPVTNFHQAQFPQ-YVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY-LERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRM---RRDGW-------PAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLV 476 HSP 2 Score: 131.339 bits (329), Expect = 6.389e-50 Identity = 80/221 (36.20%), Postives = 116/221 (52.49%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY E+P++ ++S +VE + RK I ++ G KP+ +F + + ++D++ NF+ PT IQ G+P+ L GRD +GIAQTG+GKTL ++LPA++HI Q P R GP L+L+PTRELA Q++ K IKS C YGGA K QI L EI + TPGR+ D + +G NL+ Sbjct: 55 FEKNFYNENPEVHHMSQYDVEEYR-RKREITVR------------------------------GSGCPKPVTNFHQAQFPQ-YVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ--PYLERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLR 241 HSP 3 Score: 88.9669 bits (219), Expect = 6.389e-50 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 3448 EVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 EV + + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + VQ+N+G+L+L S HN L Sbjct: 234 EVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALEL------SANHNIL 315
BLAST of ATP-dependent RNA helicase vs. Ensembl Zebrafish
Match: si:dkey-156n14.5 (si:dkey-156n14.5 [Source:ZFIN;Acc:ZDB-GENE-030131-18]) HSP 1 Score: 303.908 bits (777), Expect = 3.634e-88 Identity = 176/408 (43.14%), Postives = 252/408 (61.76%), Query Frame = 1 Query: 1087 PNPVRNFEESFFDHPD----------ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLM 2271 P PV NF ++ F H + ++ + +Q F+EP+ IQ +P+ ++GRD++GIAQTG+GKTLA+LLPA +HI QP E+ GP L+L+PTRELA Q+Q Y I S YGGA K QI L+ EI + TPGR+ D + G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +++ VQ+N+G L+L+A H + Q V+ ++K +L++++ I + E+K IIFV K +C +L + R G A IHGD Q ER+ L RSG I+IATDVASRGLD+ D+ VINYD+P + E+YVHR+GRT R+ G A+TF ++ A +L+R+L++A Q + L QL+ Sbjct: 91 PKPVTNFHQAQFPHLNNQFSHFILFYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY-LERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDELTRRM---RRDGW-------PAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLV 487 HSP 2 Score: 129.413 bits (324), Expect = 1.954e-49 Identity = 81/231 (35.06%), Postives = 117/231 (50.65%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE----------ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY E+P++ ++S +VE + RK I ++ G KP+ +F + + H ++D++ NF+ PT IQ G+P+ L GRD +GIAQTG+GKTL ++LPA++HI Q P R GP L+L+PTRELA Q++ K IKS C YGGA K QI L EI + TPGR+ D + +G NL+ Sbjct: 55 FEKNFYNENPEVHHMSQYDVEEY-RRKREITVR------------------------------GSGCPKPVTNFHQAQFPHLNNQFSHFILFYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ--PYLERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLR 252 HSP 3 Score: 88.9669 bits (219), Expect = 1.954e-49 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 3448 EVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 EV + + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + VQ+N+G+L+L S HN L Sbjct: 245 EVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALEL------SANHNIL 326
BLAST of ATP-dependent RNA helicase vs. Ensembl Xenopus
Match: ddx43 (DEAD-box helicase 43 [Source:NCBI gene;Acc:779928]) HSP 1 Score: 404.445 bits (1038), Expect = 9.627e-124 Identity = 214/483 (44.31%), Postives = 316/483 (65.42%), Query Frame = 1 Query: 847 KMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYRI 2295 K + K ++ P+ + FY+E P V+ M+ DE EK+ E C+ +L +E + IPNPV FE++F P++++ + K F+ P+PIQ AWP+++ G DLIGIAQTGTGKTLA+LLP FIH++ QP PRE++ GP +L+L+PTRELA+Q++ E KY Y +S+ YGG D+ +QI ++ + +IV+ TPGR+ DL+ + +NLK ++YLVLDEADRMLDMGFE Q++ ++ +R R T+MTSATWP GV+R+A +++K+P+ V VGTLDL A +TV QHV + +K ++ + +KP+DK+I+FV +K DL+ + L+ + +HG+ +Q +RE AL + G I++ATD+ASRGLD+ D+T V+N+DFP+NIEEYVHRVGRTGRAGRTGE+ T + + D A ELI IL+ A+QEVP L + + +Q ++I Sbjct: 201 KYEAMKWADMPPIAKAFYKESPEVASMSRDEVEKW------------RKENNNIICD-----------DLKEE---KRSIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDLAAVNTVTQHVLVIPEEEKRAFVLHFIDSLKPQDKVIVFVGKKLVADDLSSDFSLQ----------GIPVQSLHGNREQCDREQALDDFKKGKVRILVATDLASRGLDVHDVTHVLNFDFPRNIEEYVHRVGRTGRAGRTGESITLVTRKDWKVAGELISILERANQEVPGDLFDMAERYQQFKI 647 HSP 2 Score: 179.104 bits (453), Expect = 1.817e-65 Identity = 92/228 (40.35%), Postives = 134/228 (58.77%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 PI + FY+E P++ ++S +EVE + NNI+ DD E++ I P+ FE+ F PE++ ++ FE PTPIQ WPVIL G D IGIAQTGTGKTL ++LP IH++ Q PR+ + GP +L+L+PTRELA+Q+++E K KY +S+C YGG ++ QIN + +IV+ TPGR+NDL + +NLK + + D Sbjct: 212 PIAKAFYKESPEVASMSRDEVEKWRKENNNIIC------------------DDLKEEKR-------SIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLD 414 HSP 3 Score: 93.5893 bits (231), Expect = 1.817e-65 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 ++YLVLDEADRMLDMGFEPQ++ I+ D R R +IMTSATWP+ VR++A Y+ +P+ V VG+LDL Sbjct: 408 ITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDL 473
BLAST of ATP-dependent RNA helicase vs. Ensembl Xenopus
Match: ddx43 (DEAD-box helicase 43 [Source:NCBI gene;Acc:779928]) HSP 1 Score: 378.252 bits (970), Expect = 4.366e-117 Identity = 191/388 (49.23%), Postives = 276/388 (71.13%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQ 2241 + IPNPV FE++F P++++ + K F+ P+PIQ AWP+++ G DLIGIAQTGTGKTLA+LLP FIH++ QP PRE++ GP +L+L+PTRELA+Q++ E KY Y +S+ YGG D+ +QI ++ + +IV+ TPGR+ DL+ + +NLK ++YLVLDEADRMLDMGFE Q++ ++ +R R T+MTSATWP GV+R+A +++K+P+ V VGTLDL A +TV QHV + +K ++ + +KP+DK+I+FV +K DL+ + L+ + +HG+ +Q +RE AL + G I++ATD+ASRGLD+ D+T V+N+DFP+NIEEYVHRVGRTGRAGRTGE+ T + + D A ELI IL+ A+Q Sbjct: 26 RSIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDLAAVNTVTQHVLVIPEEEKRAFVLHFIDSLKPQDKVIVFVGKKLVADDLSSDFSLQ----------GIPVQSLHGNREQCDREQALDDFKKGKVRILVATDLASRGLDVHDVTHVLNFDFPRNIEEYVHRVGRTGRAGRTGESITLVTRKDWKVAGELISILERANQ 403 HSP 2 Score: 162.155 bits (409), Expect = 8.920e-60 Identity = 87/213 (40.85%), Postives = 124/213 (58.22%), Query Frame = 2 Query: 2807 LSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 +S +EVE + NNI+ CD D E++ I P+ FE+ F PE++ ++ FE PTPIQ WPVIL G D IGIAQTGTGKTL ++LP IH++ Q PR+ + GP +L+L+PTRELA+Q+++E K KY +S+C YGG ++ QIN + +IV+ TPGR+NDL + +NLK + + D Sbjct: 1 MSRDEVEKWRKENNNII--------------CD----DLKEEK-------RSIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLD 188 HSP 3 Score: 91.6633 bits (226), Expect = 8.920e-60 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 ++YLVLDEADRMLDMGFEPQ++ I+ D R R +IMTSATWP+ VR++A Y+ +P+ V VG+LDL Sbjct: 182 ITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDL 247
BLAST of ATP-dependent RNA helicase vs. Ensembl Xenopus
Match: ddx43 (DEAD-box helicase 43 [Source:NCBI gene;Acc:779928]) HSP 1 Score: 377.096 bits (967), Expect = 1.329e-116 Identity = 191/388 (49.23%), Postives = 276/388 (71.13%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQ 2241 + IPNPV FE++F P++++ + K F+ P+PIQ AWP+++ G DLIGIAQTGTGKTLA+LLP FIH++ QP PRE++ GP +L+L+PTRELA+Q++ E KY Y +S+ YGG D+ +QI ++ + +IV+ TPGR+ DL+ + +NLK ++YLVLDEADRMLDMGFE Q++ ++ +R R T+MTSATWP GV+R+A +++K+P+ V VGTLDL A +TV QHV + +K ++ + +KP+DK+I+FV +K DL+ + L+ + +HG+ +Q +RE AL + G I++ATD+ASRGLD+ D+T V+N+DFP+NIEEYVHRVGRTGRAGRTGE+ T + + D A ELI IL+ A+Q Sbjct: 68 RSIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDLAAVNTVTQHVLVIPEEEKRAFVLHFIDSLKPQDKVIVFVGKKLVADDLSSDFSLQ----------GIPVQSLHGNREQCDREQALDDFKKGKVRILVATDLASRGLDVHDVTHVLNFDFPRNIEEYVHRVGRTGRAGRTGESITLVTRKDWKVAGELISILERANQ 445 HSP 2 Score: 162.54 bits (410), Expect = 7.130e-60 Identity = 82/191 (42.93%), Postives = 116/191 (60.73%), Query Frame = 2 Query: 2888 LDEDCDQHN-----DDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 D C + N DD E++ I P+ FE+ F PE++ ++ FE PTPIQ WPVIL G D IGIAQTGTGKTL ++LP IH++ Q PR+ + GP +L+L+PTRELA+Q+++E K KY +S+C YGG ++ QIN + +IV+ TPGR+NDL + +NLK + + D Sbjct: 47 FDYSCRKENNNIICDDLKEEK-------RSIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLD 230 HSP 3 Score: 91.6633 bits (226), Expect = 7.130e-60 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 ++YLVLDEADRMLDMGFEPQ++ I+ D R R +IMTSATWP+ VR++A Y+ +P+ V VG+LDL Sbjct: 224 ITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDL 289
BLAST of ATP-dependent RNA helicase vs. Ensembl Xenopus
Match: ddx43 (DEAD-box helicase 43 [Source:NCBI gene;Acc:779928]) HSP 1 Score: 377.481 bits (968), Expect = 1.407e-116 Identity = 191/388 (49.23%), Postives = 276/388 (71.13%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQ 2241 + IPNPV FE++F P++++ + K F+ P+PIQ AWP+++ G DLIGIAQTGTGKTLA+LLP FIH++ QP PRE++ GP +L+L+PTRELA+Q++ E KY Y +S+ YGG D+ +QI ++ + +IV+ TPGR+ DL+ + +NLK ++YLVLDEADRMLDMGFE Q++ ++ +R R T+MTSATWP GV+R+A +++K+P+ V VGTLDL A +TV QHV + +K ++ + +KP+DK+I+FV +K DL+ + L+ + +HG+ +Q +RE AL + G I++ATD+ASRGLD+ D+T V+N+DFP+NIEEYVHRVGRTGRAGRTGE+ T + + D A ELI IL+ A+Q Sbjct: 82 RSIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDLAAVNTVTQHVLVIPEEEKRAFVLHFIDSLKPQDKVIVFVGKKLVADDLSSDFSLQ----------GIPVQSLHGNREQCDREQALDDFKKGKVRILVATDLASRGLDVHDVTHVLNFDFPRNIEEYVHRVGRTGRAGRTGESITLVTRKDWKVAGELISILERANQ 459 HSP 2 Score: 162.155 bits (409), Expect = 8.843e-60 Identity = 80/186 (43.01%), Postives = 116/186 (62.37%), Query Frame = 2 Query: 2888 LDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 D C + N++ D ++ I P+ FE+ F PE++ ++ FE PTPIQ WPVIL G D IGIAQTGTGKTL ++LP IH++ Q PR+ + GP +L+L+PTRELA+Q+++E K KY +S+C YGG ++ QIN + +IV+ TPGR+NDL + +NLK + + D Sbjct: 61 FDYSCRKENNNIICDDLK--EEKRSIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLD 244 HSP 3 Score: 91.6633 bits (226), Expect = 8.843e-60 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 ++YLVLDEADRMLDMGFEPQ++ I+ D R R +IMTSATWP+ VR++A Y+ +P+ V VG+LDL Sbjct: 238 ITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDL 303
BLAST of ATP-dependent RNA helicase vs. Ensembl Xenopus
Match: ddx43 (DEAD-box helicase 43 [Source:NCBI gene;Acc:779928]) HSP 1 Score: 376.711 bits (966), Expect = 3.576e-116 Identity = 191/388 (49.23%), Postives = 276/388 (71.13%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQ 2241 + IPNPV FE++F P++++ + K F+ P+PIQ AWP+++ G DLIGIAQTGTGKTLA+LLP FIH++ QP PRE++ GP +L+L+PTRELA+Q++ E KY Y +S+ YGG D+ +QI ++ + +IV+ TPGR+ DL+ + +NLK ++YLVLDEADRMLDMGFE Q++ ++ +R R T+MTSATWP GV+R+A +++K+P+ V VGTLDL A +TV QHV + +K ++ + +KP+DK+I+FV +K DL+ + L+ + +HG+ +Q +RE AL + G I++ATD+ASRGLD+ D+T V+N+DFP+NIEEYVHRVGRTGRAGRTGE+ T + + D A ELI IL+ A+Q Sbjct: 94 RSIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDLAAVNTVTQHVLVIPEEEKRAFVLHFIDSLKPQDKVIVFVGKKLVADDLSSDFSLQ----------GIPVQSLHGNREQCDREQALDDFKKGNFRILVATDLASRGLDVHDVTHVLNFDFPRNIEEYVHRVGRTGRAGRTGESITLVTRKDWKVAGELISILERANQ 471 HSP 2 Score: 162.155 bits (409), Expect = 7.679e-60 Identity = 80/186 (43.01%), Postives = 116/186 (62.37%), Query Frame = 2 Query: 2888 LDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 D C + N++ D ++ I P+ FE+ F PE++ ++ FE PTPIQ WPVIL G D IGIAQTGTGKTL ++LP IH++ Q PR+ + GP +L+L+PTRELA+Q+++E K KY +S+C YGG ++ QIN + +IV+ TPGR+NDL + +NLK + + D Sbjct: 73 FDYSCRKENNNIICDDLK--EEKRSIPNPVPRFEDAFHPFPEVMSALEKSGFERPTPIQSQAWPVILQGIDLIGIAQTGTGKTLAYLLPGFIHLDLQPIPREQQDGPGMLVLAPTRELALQVKAECSKYKYKGFESICIYGGGDRNNQINKVTKGVDIVIATPGRLNDLQMNNFVNLKSITYLVLD 256 HSP 3 Score: 91.6633 bits (226), Expect = 7.679e-60 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 ++YLVLDEADRMLDMGFEPQ++ I+ D R R +IMTSATWP+ VR++A Y+ +P+ V VG+LDL Sbjct: 250 ITYLVLDEADRMLDMGFEPQIMKILIDIRPDRHTIMTSATWPDGVRRLAKSYLKDPMMVYVGTLDL 315
BLAST of ATP-dependent RNA helicase vs. Ensembl Mouse
Match: Ddx43 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]) HSP 1 Score: 394.045 bits (1011), Expect = 2.580e-120 Identity = 212/473 (44.82%), Postives = 311/473 (65.75%), Query Frame = 1 Query: 844 IKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFD-KDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFL 2259 +K + K ++ P+ +NFY E + S M+ + + + + NF T D KD E+ + IPNP+ FE++F +P+++ I++ FQ+P+PIQ AWPI++ G DLIG+AQTGTGKTL++L+P FIH++ QP RE+R GP +L+L+PTRELA+Q++ E KY+Y D+ SV YGG D+ QI + + +I++ TPGR+ DL+ + +NLK V+YLVLDEAD+MLDMGFE Q++ ++ VR RQT+MTSATWP+ V+R+A +++K P+ V VGTLDL A TVKQ++ +K + L ++ P+DK+I+FV+RKA L+ +L L+ + +HG+ +Q +RE AL+ ++G I+IATD+ASRGLD+ D+T V NYDFP+NIEEYVHRVGRTGRAGRTG + T + +ND A ELI IL+ A+Q +P+ L Sbjct: 179 LKWEKKKWADLPPIKKNFYIESATTSSMSQVQIDNWRKE------------------NFNITCDDLKDGEK--------RPIPNPICKFEDAFQSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLSYLMPGFIHLDSQPLAREQRNGPGMLVLTPTRELALQVEAECSKYSYGDLKSVCVYGGGDRDGQIQDVSKGVDIIIATPGRLNDLQMNNFVNLKSVTYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTIMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIITTEEEKRTHIQTFLENMSPKDKVIVFVSRKAVADHLSSDLILRH----------ISVESLHGNREQSDREKALENFKTGKVRILIATDLASRGLDVHDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGMSITLITRNDWRVATELINILERANQNIPEEL 615 HSP 2 Score: 172.17 bits (435), Expect = 8.277e-63 Identity = 91/228 (39.91%), Postives = 133/228 (58.33%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 PI +NFY E ++S +++++ RK N I CD D E P I PI FE+ F +PE+++ IK F+ PTPIQ WP++L G D IG+AQTGTGKTL++++P IH++ Q R+ R GP +L+L+PTRELA+Q+E+E K Y ++KSVC YGG ++ QI + +I++ TPGR+NDL + +NLK V + D Sbjct: 191 PIKKNFYIESATTSSMSQVQIDNW--RKENFNIT------------CDDLKDG------EKRP----IPNPICKFEDAFQSYPEVMENIKRAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLSYLMPGFIHLDSQPLAREQRNGPGMLVLTPTRELALQVEAECSKYSYGDLKSVCVYGGGDRDGQIQDVSKGVDIIIATPGRLNDLQMNNFVNLKSVTYLVLD 394 HSP 3 Score: 90.8929 bits (224), Expect = 8.277e-63 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIV 3678 V+YLVLDEAD+MLDMGFEPQ++ I+ D R RQ+IMTSATWP VR++A Y+ P+ V VG+LDL+ Sbjct: 388 VTYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTIMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVA 455
BLAST of ATP-dependent RNA helicase vs. Ensembl Mouse
Match: Ddx17 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Source:MGI Symbol;Acc:MGI:1914290]) HSP 1 Score: 311.997 bits (798), Expect = 3.501e-91 Identity = 181/404 (44.80%), Postives = 252/404 (62.38%), Query Frame = 1 Query: 1081 VIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYT-YHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQ 2283 V P PV F + F ++ + Q F EP+PIQC +P+ ++GRD++GIAQTG+GKTLA+LLPA +HI QP E+ GP L+L+PTRELA Q+Q Y + S YGGA K QI L+ EI + TPGR+ D +SG NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +++ Q+NVG L+L+A H + Q V+ +K +L++++ I + E+K IIFV K +C DL + R G A IHGD Q ER+ L RSG I+IATDVASRGLD+ D+ VINYD+P + E+YVHR+GRT R+ G A+TF ++ A ELI++L++A+Q + L QL+ DH+ Sbjct: 86 VCPKPVFAFHHANFPQ-YVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY-LERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM---RRDGW-------PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLV-DHR 476 HSP 2 Score: 130.183 bits (326), Expect = 8.371e-49 Identity = 85/228 (37.28%), Postives = 117/228 (51.32%), Query Frame = 2 Query: 2747 DLGIYP-IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 DL P +NFY EHP++ L+ EV+ L RK I ++ P KP+ +F + ++D++ +F PTPIQC G+P+ L GRD +GIAQTG+GKTL ++LPA++HI Q P R GP L+L+PTRELA Q++ K +KS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 44 DLSELPKFEKNFYVEHPEVARLTPYEVDE-LRRKKEITVRGGDVCP-----------------------------KPVFAFHHANFPQ-YVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ--PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLR 238 HSP 3 Score: 86.2705 bits (212), Expect = 8.371e-49 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + Q+NVG+L+L S HN L Sbjct: 239 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLEL------SANHNIL 312
BLAST of ATP-dependent RNA helicase vs. Ensembl Mouse
Match: Ddx17 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Source:MGI Symbol;Acc:MGI:1914290]) HSP 1 Score: 311.997 bits (798), Expect = 3.681e-91 Identity = 181/404 (44.80%), Postives = 252/404 (62.38%), Query Frame = 1 Query: 1081 VIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYT-YHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQ 2283 V P PV F + F ++ + Q F EP+PIQC +P+ ++GRD++GIAQTG+GKTLA+LLPA +HI QP E+ GP L+L+PTRELA Q+Q Y + S YGGA K QI L+ EI + TPGR+ D +SG NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +++ Q+NVG L+L+A H + Q V+ +K +L++++ I + E+K IIFV K +C DL + R G A IHGD Q ER+ L RSG I+IATDVASRGLD+ D+ VINYD+P + E+YVHR+GRT R+ G A+TF ++ A ELI++L++A+Q + L QL+ DH+ Sbjct: 86 VCPKPVFAFHHANFPQ-YVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY-LERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM---RRDGW-------PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLV-DHR 476 HSP 2 Score: 130.183 bits (326), Expect = 8.371e-49 Identity = 85/228 (37.28%), Postives = 117/228 (51.32%), Query Frame = 2 Query: 2747 DLGIYP-IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 DL P +NFY EHP++ L+ EV+ L RK I ++ P KP+ +F + ++D++ +F PTPIQC G+P+ L GRD +GIAQTG+GKTL ++LPA++HI Q P R GP L+L+PTRELA Q++ K +KS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 44 DLSELPKFEKNFYVEHPEVARLTPYEVDE-LRRKKEITVRGGDVCP-----------------------------KPVFAFHHANFPQ-YVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ--PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLR 238 HSP 3 Score: 86.2705 bits (212), Expect = 8.371e-49 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + Q+NVG+L+L S HN L Sbjct: 239 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLEL------SANHNIL 312
BLAST of ATP-dependent RNA helicase vs. Ensembl Mouse
Match: Ddx5 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:MGI Symbol;Acc:MGI:105037]) HSP 1 Score: 307.76 bits (787), Expect = 3.514e-90 Identity = 183/466 (39.27%), Postives = 274/466 (58.80%), Query Frame = 1 Query: 889 RNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYH-DIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKD 2277 +NFY+EHP +++ T E + T+ + E + PK PV NF E+ F +++ I +Q F EP+ IQ WP+ ++G D++G+AQTG+GKTL++LLPA +HI QP E+ GP L+L+PTRELA Q+Q +Y + S YGGA K QI L+ EI + TPGR+ D + G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K+ + +N+G L+L+A H + Q V+ +K ++L+ ++ I + E+K I+FV K +C +L ++ R G A IHGD QQER+ L + G I+IATDVASRGLD+ D+ VINYD+P + E+Y+HR+GRT R+ +TG A+TF N++ ++LI +L++A+Q + L QL++D Sbjct: 56 KNFYQEHPDLARRTAQEVD----------------------------TYRRSKEITVRGHNCPK----PVLNFYEANFP-ANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPF-LERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKM---RRDGW-------PAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVED 477 HSP 2 Score: 130.954 bits (328), Expect = 6.426e-49 Identity = 82/229 (35.81%), Postives = 118/229 (51.53%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 +NFY+EHPD+ + +EV+++ R I ++ HN KP+ +F E + ++D+I NF PT IQ GWPV L G D +G+AQTG+GKTL+++LPA++HI Q P R GP L+L+PTRELA Q++ + + +KS C YGGA K QI L EI + TPGR+ D + G NL+ + D Sbjct: 54 FEKNFYQEHPDLARRTAQEVDTYR-RSKEITVR--------------GHN----------------CPKPVLNFYEANFP-ANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ--PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLD 248 HSP 3 Score: 85.5001 bits (210), Expect = 6.426e-49 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + + +N+G+L+L S HN L Sbjct: 241 RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALEL------SANHNIL 314
BLAST of ATP-dependent RNA helicase vs. Ensembl Mouse
Match: Ddx17 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Source:MGI Symbol;Acc:MGI:1914290]) HSP 1 Score: 263.462 bits (672), Expect = 4.342e-77 Identity = 161/399 (40.35%), Postives = 222/399 (55.64%), Query Frame = 1 Query: 889 RNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKY-TYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDL 2076 +NFY EHP V+++T E ++ K+ + G C P PV F + F ++ + Q F EP+PIQC +P+ ++GRD++GIAQTG+GKTLA+LLPA +HI QP E+ GP L+L+PTRELA Q+Q Y + S YGGA K QI L+ EI + TPGR+ D +SG NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +++ Q+NVG L+L+A H + Q V+ +K +L++++ I + E+K IIFV K +C DL + R G A IHGD Q ER+ L RSG I+IATDVASRGL P L Sbjct: 53 KNFYVEHPEVARLTPYEVDEL-------RRKKEITVRGGDVC------------------------PKPVFAFHHANFPQ-YVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY-LERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRM---RRDGW-------PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLGSPAL 408 HSP 2 Score: 129.028 bits (323), Expect = 1.526e-48 Identity = 85/228 (37.28%), Postives = 117/228 (51.32%), Query Frame = 2 Query: 2747 DLGIYP-IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 DL P +NFY EHP++ L+ EV+ L RK I ++ P KP+ +F + ++D++ +F PTPIQC G+P+ L GRD +GIAQTG+GKTL ++LPA++HI Q P R GP L+L+PTRELA Q++ K +KS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 44 DLSELPKFEKNFYVEHPEVARLTPYEVDE-LRRKKEITVRGGDVCP-----------------------------KPVFAFHHANFPQ-YVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ--PYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLR 238 HSP 3 Score: 86.2705 bits (212), Expect = 1.526e-48 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + Q+NVG+L+L S HN L Sbjct: 239 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLEL------SANHNIL 312
BLAST of ATP-dependent RNA helicase vs. UniProt/SwissProt
Match: sp|Q9NXZ2|DDX43_HUMAN (Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens OX=9606 GN=DDX43 PE=1 SV=2) HSP 1 Score: 384.03 bits (985), Expect = 6.506e-116 Identity = 214/488 (43.85%), Postives = 313/488 (64.14%), Query Frame = 1 Query: 841 NIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFD-KDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL---MKDHQDYR 2292 +K + TK ++ P+ +NFY+E + S M+ E + + + NF T D KD E+ + IPNP F+++F +P+++ I+K FQ+P+PIQ AWPI++ G DLIG+AQTGTGKTL +L+P FIH+ QP + +R P +L+L+PTRELA+Q++ E KY+Y + SV YGG ++ +QI +LK+ +I++ TPGR+ DL+ S +NLK+++YLVLDEAD+MLDMGFE Q++ ++ VR RQTVMTSATWP V R+A +++K P+ V VGTLDL A +VKQ++ +K + L + DK+I+FV+RKA L+ +L L G + +HGD +Q++RE AL+ ++G I+IATD+ASRGLD+ D+T V N+DFP+NIEEYVHR+GRTGRAGRTG + T + +ND A+ELI IL+ A+Q +P+ L + K HQ R Sbjct: 180 GLKWQKTKWADLPPIKKNFYKESTATSAMSKVEADSWRKE------------------NFNITWDDLKDGEK--------RPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLIL----------GNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAERFKAHQQKR 631 HSP 2 Score: 160.229 bits (404), Expect = 1.172e-58 Identity = 85/228 (37.28%), Postives = 127/228 (55.70%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 PI +NFY+E +S E +S+ RK N I DD + + +P P +F++ F +PE+++ IK F+ PTPIQ WP++L G D IG+AQTGTGKTL +++P IH+ Q + R P +L+L+PTRELA+Q+E E K Y ++SVC YGG + QI L+ +I++ TPGR+NDL + +NLK++ + D Sbjct: 193 PIKKNFYKESTATSAMSKVEADSW--RKENFNITW----------------DDLKDGEKRPIP------NPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLD 396 HSP 3 Score: 91.6633 bits (226), Expect = 1.172e-58 Identity = 42/79 (53.16%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 ++YLVLDEAD+MLDMGFEPQ++ I+ D R RQ++MTSATWP V ++A Y+ P+ V VG+LDL+ SS+ N + Sbjct: 390 ITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVA--VSSVKQNII 466
BLAST of ATP-dependent RNA helicase vs. UniProt/SwissProt
Match: sp|Q86TM3|DDX53_HUMAN (Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens OX=9606 GN=DDX53 PE=1 SV=3) HSP 1 Score: 339.732 bits (870), Expect = 2.633e-100 Identity = 175/407 (43.00%), Postives = 272/407 (66.83%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYRIN 2298 ++IP P F+++F +PD+L I + +P+PIQ AWPI++ G DLI +AQTGTGKTL++L+P FIH++ QP RE+R GP +L+L+PTRELA+ ++ E KY+Y + S+ YGG ++ QI + + +I++ TPGR+ DL+ + +NL+ ++YLV+DEAD+MLDM FE Q+ ++ VR RQTVMTSATWP V+++AL+++K+P+ V VG L+L A +TVKQ++ +K E + ++ P DK+I+FV++K DL+ + ++ + A +HG+ +Q ++E A++ +SG I+I TD+ SRGLD+ D+T V NYDFP+NI+ YVHRVG GR G+TG + T + + D A ELI+IL A+Q VP+ L + + Y++N Sbjct: 214 RLIPKPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQ----------GISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRANQSVPEDLVVMA---EQYKLN 607 HSP 2 Score: 151.754 bits (382), Expect = 1.111e-55 Identity = 82/228 (35.96%), Postives = 125/228 (54.82%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 P+ +NFY E +S E++ RK N I CD D + ++P KP F++ F ++P++L I + PTPIQ WP+IL G D I +AQTGTGKTL++++P IH++ Q R+ R GP +L+L+PTRELA+ +E+E K Y +KS+C YGG + QI + +I++ TPGR+NDL + +NL+ + + D Sbjct: 173 PVKKNFYIESKATSCMS--EMQVINWRKENFNIT------------CD----DLKSGEKRLIP------KPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVID 376 HSP 3 Score: 90.1225 bits (222), Expect = 1.111e-55 Identity = 39/68 (57.35%), Postives = 55/68 (80.88%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIV 3678 ++YLV+DEAD+MLDM FEPQ+ I+ D R RQ++MTSATWP+ VRQ+AL Y+ +P+ V VG+L+L+ Sbjct: 370 ITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVA 437
BLAST of ATP-dependent RNA helicase vs. UniProt/SwissProt
Match: sp|Q755N4|DBP2_ASHGO (ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP2 PE=3 SV=2) HSP 1 Score: 336.65 bits (862), Expect = 3.969e-100 Identity = 201/460 (43.70%), Postives = 279/460 (60.65%), Query Frame = 1 Query: 889 RNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPD-ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQP--KPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEIL--AHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVP 2250 +NFY EH V KM+ DE E+F K+ E I + +P P+R F+E+ F P+ +L E++++ F++P+ IQC WP+ ++GRD+IG+A TG+GKTL++ LP +HI QP P + GP VL+L+PTRELA+QIQ E K+ I + YGG K QI L+ EI++ TPGR+ D+ + G NLK V+YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP VQ++A ++ +P+QVN+G+L+L A HT+ Q VE V DK RLV+ L A + KIIIF + K C ++ L R G A IHGD QQER+ L R+G IM+ATDVA+RG+D+ + VINYD P NIE+YVHR+GRTGRAG TG A +F + + + A+LI I+++A QE+P Sbjct: 76 KNFYVEHEDVQKMSTDEVEQF----------------------------RKENEMKI----VGHDVPKPIRTFDEAGF--PEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGD---GPVVLVLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIASKDKDSKIIIFASTKRTCDEITSYL---RQDGW-------PALAIHGDKQQQERDWVLNEFRTGRSPIMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLGAQLISIMREAKQEIP 488 HSP 2 Score: 150.984 bits (380), Expect = 1.228e-36 Identity = 93/231 (40.26%), Postives = 129/231 (55.84%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQ--MKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 +NFY EH D++ +S +EVE F RK N E+K H+ + KPIR+F+E + PE +L +K FE PT IQC GWP+ L GRD IG+A TG+GKTL++ LP ++HI Q + P GP VL+L+PTRELA+QI+ E K + I++ C YGG K QI L+ EI++ TPGR+ D++ +G NLK V + D Sbjct: 74 FEKNFYVEHEDVQKMSTDEVEQF--RKEN----EMKIVG---------HD----------------VPKPIRTFDEAGF--PEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGD---GPVVLVLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLD 268 HSP 3 Score: 95.5153 bits (236), Expect = 1.082e-18 Identity = 43/78 (55.13%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 3448 EVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 E+ + +V+YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ V+Q+A Y+ +P+QVN+GSL+L S Sbjct: 253 EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLHDPIQVNIGSLELAAS 330
BLAST of ATP-dependent RNA helicase vs. UniProt/SwissProt
Match: sp|P0CQ76|DBP2_CRYNJ (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP2 PE=3 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 1.134e-99 Identity = 193/402 (48.01%), Postives = 261/402 (64.93%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPD-ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQP--KPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPED-KIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 K +P P+ FEE+ F PD I++EIR+ F PS IQC AWP+ ++GRDL+ IA+TG+GKT++F LPA +HI QP P + GP VLIL+PTRELA+QIQ E K+ I + YGGA K QI L+ EI V TPGR+ D+ ++G NLK V+YLV+DEADRMLDMGFE Q+ ++ +R RQT++ SATWP VQR+A+ + + +QVN+G+LDL A H V QHVE DK +L+ L I E+ K++IFVA K DL FL+ A IHGD Q ER+ L +SG IM+ATDVASRGLD+ D+ VINYDFP N E+Y+HR+GRTGRAGR G ++T+ ++ A EL++IL+++ ++P L ++ Sbjct: 103 KNVPRPITTFEEAGF--PDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGD---GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLT--KFLRMD--------GWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEM 489 HSP 2 Score: 133.265 bits (334), Expect = 3.521e-49 Identity = 86/239 (35.98%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 2741 YTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQ--MKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 + + + +NFY + P + S EVE+F R M + K P +PI +FEE + P+ I+ I+ + F P+ IQC WP+ L GRD + IA+TG+GKT++F LPA++HI Q + P GP VLIL+PTRELA+QI++E K + I++ YGGA K QI L+ EI V TPGR+ D++ G NLK V + D Sbjct: 62 WQNQSLAKFEKNFYVQDPRVTARSDAEVEAF--RAEKEMKIQGKNVP-----------------------------RPITTFEEAGF--PDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGD---GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMD 264 HSP 3 Score: 86.6557 bits (213), Expect = 3.521e-49 Identity = 37/70 (52.86%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 +V+YLV+DEADRMLDMGFEPQ+ I++ R RQ+++ SATWP+ V+++A+ ++ + +QVN+GSLDL + Sbjct: 257 RVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTAN 326
BLAST of ATP-dependent RNA helicase vs. UniProt/SwissProt
Match: sp|P0CQ77|DBP2_CRYNB (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP2 PE=3 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 1.134e-99 Identity = 193/402 (48.01%), Postives = 261/402 (64.93%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPD-ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQP--KPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPED-KIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 K +P P+ FEE+ F PD I++EIR+ F PS IQC AWP+ ++GRDL+ IA+TG+GKT++F LPA +HI QP P + GP VLIL+PTRELA+QIQ E K+ I + YGGA K QI L+ EI V TPGR+ D+ ++G NLK V+YLV+DEADRMLDMGFE Q+ ++ +R RQT++ SATWP VQR+A+ + + +QVN+G+LDL A H V QHVE DK +L+ L I E+ K++IFVA K DL FL+ A IHGD Q ER+ L +SG IM+ATDVASRGLD+ D+ VINYDFP N E+Y+HR+GRTGRAGR G ++T+ ++ A EL++IL+++ ++P L ++ Sbjct: 103 KNVPRPITTFEEAGF--PDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGD---GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLT--KFLRMD--------GWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEM 489 HSP 2 Score: 133.265 bits (334), Expect = 3.521e-49 Identity = 86/239 (35.98%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 2741 YTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQ--MKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 + + + +NFY + P + S EVE+F R M + K P +PI +FEE + P+ I+ I+ + F P+ IQC WP+ L GRD + IA+TG+GKT++F LPA++HI Q + P GP VLIL+PTRELA+QI++E K + I++ YGGA K QI L+ EI V TPGR+ D++ G NLK V + D Sbjct: 62 WQNQSLAKFEKNFYVQDPRVTARSDAEVEAF--RAEKEMKIQGKNVP-----------------------------RPITTFEEAGF--PDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGD---GPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMD 264 HSP 3 Score: 86.6557 bits (213), Expect = 3.521e-49 Identity = 37/70 (52.86%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 +V+YLV+DEADRMLDMGFEPQ+ I++ R RQ+++ SATWP+ V+++A+ ++ + +QVN+GSLDL + Sbjct: 257 RVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTAN 326
BLAST of ATP-dependent RNA helicase vs. TrEMBL
Match: A0A1B6GVC3 (Uncharacterized protein (Fragment) OS=Cuerna arida OX=1464854 GN=g.12726 PE=3 SV=1) HSP 1 Score: 451.44 bits (1160), Expect = 1.595e-140 Identity = 248/475 (52.21%), Postives = 326/475 (68.63%), Query Frame = 1 Query: 880 PVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL------MKDHQD 2286 P+ + FY+E P V M + ++F L+K NI++ E GE+ IPNPV FE++F +PDIL I Q F EPSPIQC AWPIL++G+DLIGIAQTGTGKTLAFLLPAFIHIEGQP PR +R GP VLIL+PTRELA QIQ E KY+Y I S+ YGG D+R+QI L++ EI+V TPGR+ DL +G +NL V+YLVLDEADRMLDMGFE ++ + +R RQTVMTSATWP GV+R+A ++M+NP+QV VG+LDL A HTV Q +E +D +K +L+E ++ PEDK+++FV +K++ D++ EL LK ++ IHGD +Q +RE AL ++SG I+IATDVASRG+DI D+T +INYDFP+NIEEYVHRVGRTGRAGRTGEA +F+ + D + A ELI +L++A+Q VP+ L Q+ MK+ +D Sbjct: 27 PIVKEFYKEDPQVKNMDSEMVKQFRLEKKNIVVSHTFGECGEA-------------------------IPNPVITFEQAFAPYPDILELIYNQNFTEPSPIQCQAWPILLSGKDLIGIAQTGTGKTLAFLLPAFIHIEGQPVPRSQRGGPNVLILAPTRELAQQIQMEANKYSYRGIKSICIYGGGDRREQINSLRQGVEIIVATPGRMNDLIQAGEINLNAVTYLVLDEADRMLDMGFEPEIRKTLLDIRPDRQTVMTSATWPPGVRRLAQSYMQNPIQVYVGSLDLAATHTVTQTIEIIDEDEKDNKLMEFFCNMAPEDKVMVFVGKKSRADDISSELALK----------SIICDVIHGDREQCDREKALYDLKSGEIRILIATDVASRGIDIQDITHIINYDFPRNIEEYVHRVGRTGRAGRTGEAISFVTRQDWAQARELIAMLEEANQIVPEELYQMADRFEAMKEKRD 466 HSP 2 Score: 206.838 bits (525), Expect = 1.296e-71 Identity = 108/228 (47.37%), Postives = 140/228 (61.40%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 PI + FY+E P ++N+ E V+ F L K NI++ TF +C + I P+ +FE+ F +P+IL++I NF P+PIQC WP++L G+D IGIAQTGTGKTL F+LPA IHIEGQ PR R GP VLIL+PTRELA QI+ E K Y IKS+C YGG ++ QINSLR EI+V TPGR+NDL+ G +NL V + D Sbjct: 27 PIVKEFYKEDPQVKNMDSEMVKQFRLEKKNIVVSH--TFG-----ECGE-----------------AIPNPVITFEQAFAPYPDILELIYNQNFTEPSPIQCQAWPILLSGKDLIGIAQTGTGKTLAFLLPAFIHIEGQPVPRSQRGGPNVLILAPTRELAQQIQMEANKYSYRGIKSICIYGGGDRREQINSLRQGVEIIVATPGRMNDLIQAGEINLNAVTYLVLD 230 HSP 3 Score: 96.2857 bits (238), Expect = 1.296e-71 Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 V+YLVLDEADRMLDMGFEP++ + D R RQ++MTSATWP VR++A YM NP+QV VGSLDL + Sbjct: 224 VTYLVLDEADRMLDMGFEPEIRKTLLDIRPDRQTVMTSATWPPGVRRLAQSYMQNPIQVYVGSLDLAAT 292
BLAST of ATP-dependent RNA helicase vs. TrEMBL
Match: A0A1B6L5T6 (Uncharacterized protein (Fragment) OS=Graphocephala atropunctata OX=36148 GN=g.5971 PE=3 SV=1) HSP 1 Score: 452.595 bits (1163), Expect = 1.673e-140 Identity = 253/483 (52.38%), Postives = 329/483 (68.12%), Query Frame = 1 Query: 859 TKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACE-IHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL------MKDHQD 2286 K S PV + FY E P V M + ++F LDK NI++ E GE+ IPNPV FE++F +PDIL I QKF EPSPIQC AWPIL+ G+DLIGIAQTGTGKTLAFLLPAFIHIEGQP PR +R GP VLIL+PTRELA QIQ E KY+Y I S+ YGG D+R+QI L++ EI+V TPGR+ DL +G +NL V+YLVLDEADRMLDMGFE ++ + +R RQT+MTSATWP GV+R+A ++M+NP+QV VG+LDL A HTV Q +E +D +K RL+E ++ PEDK+++FV +K++ D++ EL L KG++ C+ IHGD +Q +RE AL ++SG I+IATDVASRG+DI D+T +INYDFP+NIEEYVHRVGRTGRAGRTGEA + + + D + A ELI +L++A+Q +P+ L Q+ MK+ +D Sbjct: 51 AKWSQCPPVIKEFYEEDPQVKNMHPEMVKQFRLDKKNIVVNYTFGECGET-------------------------IPNPVMTFEQAFAPYPDILQLIYNQKFTEPSPIQCQAWPILLGGKDLIGIAQTGTGKTLAFLLPAFIHIEGQPVPRSQRGGPNVLILAPTRELAQQIQMEANKYSYRGIKSICIYGGGDRREQINSLRQGVEIIVATPGRMNDLIQAGEINLNAVTYLVLDEADRMLDMGFEPEIRKTLLDIRPDRQTIMTSATWPPGVRRLAQSYMQNPIQVYVGSLDLAATHTVTQTIEIIDEGEKEDRLMEFFCNMAPEDKVMVFVGKKSRADDISSELAL---KGIV--------CDVIHGDREQCDREKALYDLKSGEIRILIATDVASRGIDIQDITHIINYDFPRNIEEYVHRVGRTGRAGRTGEAISLVTRQDWAQARELIGMLEEANQIIPEELYQMADRFEAMKEKKD 497 HSP 2 Score: 204.527 bits (519), Expect = 3.096e-71 Identity = 108/228 (47.37%), Postives = 139/228 (60.96%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 P+ + FYEE P ++N+ E V+ F L K NI++ TF +C + I P+ +FE+ F +P+IL +I F P+PIQC WP++LGG+D IGIAQTGTGKTL F+LPA IHIEGQ PR R GP VLIL+PTRELA QI+ E K Y IKS+C YGG ++ QINSLR EI+V TPGR+NDL+ G +NL V + D Sbjct: 58 PVIKEFYEEDPQVKNMHPEMVKQFRLDKKNIVVN--YTFG-----ECGET-----------------IPNPVMTFEQAFAPYPDILQLIYNQKFTEPSPIQCQAWPILLGGKDLIGIAQTGTGKTLAFLLPAFIHIEGQPVPRSQRGGPNVLILAPTRELAQQIQMEANKYSYRGIKSICIYGGGDRREQINSLRQGVEIIVATPGRMNDLIQAGEINLNAVTYLVLD 261 HSP 3 Score: 97.4413 bits (241), Expect = 3.096e-71 Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 V+YLVLDEADRMLDMGFEP++ + D R RQ+IMTSATWP VR++A YM NP+QV VGSLDL + Sbjct: 255 VTYLVLDEADRMLDMGFEPEIRKTLLDIRPDRQTIMTSATWPPGVRRLAQSYMQNPIQVYVGSLDLAAT 323
BLAST of ATP-dependent RNA helicase vs. TrEMBL
Match: A0A087ZUZ1 (Uncharacterized protein OS=Apis mellifera OX=7460 GN=LOC411450 PE=3 SV=1) HSP 1 Score: 455.292 bits (1170), Expect = 9.899e-140 Identity = 244/477 (51.15%), Postives = 331/477 (69.39%), Query Frame = 1 Query: 862 KDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYR 2292 K S F P+ +NFY+EHP+V+ MT ++ NNI +K + E G + +D + IPNP+ FE++F +P+IL EIRKQKF +PSPIQ AWPIL++GRDLIGIAQTGTGKTLAFLLPA IHIEGQ PR +R+GP VLI++PTRELA+QI+ EV KY+YH I +V YGG ++ Q+ + E EIV+ TPGR+ DL ++ +LN+ ++YLVLDEADRMLDMGFE Q+ + +R RQTVMTSATWP GV+R+A ++MKNP+QV VG+LDL HTV Q V VD +KT + E + P DK+IIF +K + D+A +L L+ +V IHG +Q +RE AL+ +++G I++ATDVASRG+DI D+T V+NYDFP++IEEYVHRVGRTGRAGR+GE+ TFM + D ++A +LI IL++A+QEVP+ L Q+ + H+ ++ Sbjct: 154 KWSKFAPIIKNFYKEHPTVTAMTKEQVAHIRKTNNNIEVKHVFEEQGNN----------------VDLLK----IPNPIETFEQAFEIYPEILDEIRKQKFVKPSPIQSQAWPILLSGRDLIGIAQTGTGKTLAFLLPALIHIEGQQIPRVERKGPNVLIMAPTRELALQIEKEVNKYSYHGIKAVCLYGGGSRKKQVNVVTEGVEIVIATPGRLNDLVEAKILNISSITYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDLATVHTVMQKVYIVDEEEKTDMMYEFFRKMSPNDKVIIFFGKKTKVDDVASDLALQ----------SVNCQSIHGGREQSDREQALEDLKTGEVQILLATDVASRGIDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRSGESITFMTRKDWTHAKDLINILEEANQEVPEELYQMAERHKAWK 600 HSP 2 Score: 206.453 bits (524), Expect = 3.447e-52 Identity = 108/230 (46.96%), Postives = 142/230 (61.74%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDE--DQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 PI +NFY+EHP + ++ E+V NNI +K + F+E + V++L I PI +FE+ F +PEILD I+ F P+PIQ WP++L GRD IGIAQTGTGKTL F+LPALIHIEGQ PR R GP VLI++PTRELA+QIE E+ K YH IK+VC YGG + Q+N + + EIV+ TPGR+NDLV LN+ + + D Sbjct: 160 PIIKNFYKEHPTVTAMTKEQVAHIRKTNNNIEVKHV-----------------FEEQGNNVDLLK----IPNPIETFEQAFEIYPEILDEIRKQKFVKPSPIQSQAWPILLSGRDLIGIAQTGTGKTLAFLLPALIHIEGQQIPRVERKGPNVLIMAPTRELALQIEKEVNKYSYHGIKAVCLYGGGSRKKQVNVVTEGVEIVIATPGRLNDLVEAKILNISSITYLVLD 368 HSP 3 Score: 102.449 bits (254), Expect = 3.004e-18 Identity = 47/75 (62.67%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 3448 EVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 E +L I ++YLVLDEADRMLDMGFEPQ+ + D R RQ++MTSATWP+ VR++A YM NP+QV VGSLDL Sbjct: 353 EAKILNISSITYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDL 427
BLAST of ATP-dependent RNA helicase vs. TrEMBL
Match: A0A2A3E7G4 (ATP-dependent RNA helicase OS=Apis cerana cerana OX=94128 GN=APICC_00802 PE=3 SV=1) HSP 1 Score: 453.366 bits (1165), Expect = 4.571e-139 Identity = 241/477 (50.52%), Postives = 328/477 (68.76%), Query Frame = 1 Query: 862 KDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYR 2292 K S F P+ +NFY+EHP+V+ MT ++ +I E F G+ D L+ IPNP+ FE++F +P+IL EI+KQKF +PSPIQ AWPIL++GRDLIGIAQTGTGKTLAFLLPA IHIEGQ PR +R+GP VLI++PTRELA+QI+ EV KY+YH I +V YGG ++ Q+ + E EIV+ TPGR+ DL ++ +LN+ ++YLVLDEADRMLDMGFE Q+ + +R RQTVMTSATWP GV+R+A ++MK+P+QV VG+LDL HTV Q V VD +KT + E + P DK+IIF +K + D+A +L L+ +V IHG +Q +RE AL+ +++G I++ATDVASRG+DI D+T V+NYDFP++IEEYVHRVGRTGRAGR+GE+ TFM + D ++A +LI IL++A+QEVP+ L Q+ + H+ ++ Sbjct: 154 KWSKFPPIIKNFYKEHPTVTAMTKEQ-------VAHIRKTNNNIEVKHVFEEKGNNNVD-----LLK-------IPNPIETFEQAFEVYPEILDEIKKQKFVKPSPIQSQAWPILLSGRDLIGIAQTGTGKTLAFLLPALIHIEGQQTPRVERKGPNVLIMAPTRELALQIEKEVNKYSYHGIKAVCLYGGGSRKKQVNVVTEGVEIVIATPGRLNDLVEAKILNISSITYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPQGVRRLAQSYMKHPIQVFVGSLDLATVHTVMQKVYIVDEEEKTDMMYEFFRKMTPNDKVIIFFGKKTKVDDVASDLALQ----------SVNCQSIHGGREQSDREQALEDLKTGEVQILLATDVASRGIDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRSGESITFMTRKDWTHAKDLINILEEANQEVPEELYQMAERHKAWK 601 HSP 2 Score: 208.764 bits (530), Expect = 5.824e-53 Identity = 109/231 (47.19%), Postives = 142/231 (61.47%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDE---DQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 PI +NFY+EHP + ++ E+V NNI +K + F+E + V++L I PI +FE+ F +PEILD IK F P+PIQ WP++L GRD IGIAQTGTGKTL F+LPALIHIEGQ PR R GP VLI++PTRELA+QIE E+ K YH IK+VC YGG + Q+N + + EIV+ TPGR+NDLV LN+ + + D Sbjct: 160 PIIKNFYKEHPTVTAMTKEQVAHIRKTNNNIEVKHV-----------------FEEKGNNNVDLLK----IPNPIETFEQAFEVYPEILDEIKKQKFVKPSPIQSQAWPILLSGRDLIGIAQTGTGKTLAFLLPALIHIEGQQTPRVERKGPNVLIMAPTRELALQIEKEVNKYSYHGIKAVCLYGGGSRKKQVNVVTEGVEIVIATPGRLNDLVEAKILNISSITYLVLD 369 HSP 3 Score: 100.908 bits (250), Expect = 1.102e-17 Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 1 Query: 3448 EVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 E +L I ++YLVLDEADRMLDMGFEPQ+ + D R RQ++MTSATWP+ VR++A YM +P+QV VGSLDL Sbjct: 354 EAKILNISSITYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPQGVRRLAQSYMKHPIQVFVGSLDL 428
BLAST of ATP-dependent RNA helicase vs. TrEMBL
Match: A0A0L7QSF0 (Putative ATP-dependent RNA helicase DDX43 OS=Habropoda laboriosa OX=597456 GN=WH47_06660 PE=3 SV=1) HSP 1 Score: 449.129 bits (1154), Expect = 1.557e-137 Identity = 235/467 (50.32%), Postives = 317/467 (67.88%), Query Frame = 1 Query: 862 KDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEI---PIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPD 2253 K S PV +NFY+EHP+V+ MT E N T + + + + DE IPNP+ FE++F P+IL EIRKQ+F +PSPIQC AWPIL++G+DLIGIAQTGTGKTLAFLLPA IHIEGQP PR +R GP VL+++PTRELA+QI+ EV KY+YH +V YGG +++Q+ + + EIV+ TPGR+ DL +S +LNL ++YLVLDEADRMLDMGFE Q+ + +R RQTVMTSATWP GV+R+A ++MKNP+QV VG+LDL HTV Q + ++ +KT + + + P DK+++F +K++ D+A +L L+ V IHG +Q +RE AL+ +++G I++ATDVASRG+DI D+T V+NYDFP++IEEYVHRVGRTGRAGRTGE+ TFM + D S+A ELI IL++A+QEVP+ Sbjct: 155 KWSKCVPVIKNFYKEHPAVANMT-----------------------KEQVANIRKTNNNIEVKYMFDEQGNDTEQSSIPNPIETFEQAFEIFPEILEEIRKQRFTKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLLPALIHIEGQPIPRSERNGPNVLVMAPTRELALQIEKEVNKYSYHGFKAVCLYGGGSRKEQVNVVTKGVEIVIATPGRLNDLVESNILNLNSITYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDLATVHTVLQKIYIIEETEKTDMMYQFFREMAPTDKVMVFFGKKSRVDDIASDLALQ----------GVNCQSIHGGREQCDREQALEDLKTGEVQILLATDVASRGIDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFMTRRDWSHAKELINILEEANQEVPE 588 HSP 2 Score: 208.379 bits (529), Expect = 9.190e-53 Identity = 104/228 (45.61%), Postives = 140/228 (61.40%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 P+ +NFY+EHP + N++ E+V + NNI +K + D+ +D ++ I PI +FE+ F PEIL+ I+ F P+PIQC WP++L G+D IGIAQTGTGKTL F+LPALIHIEGQ PR R GP VL+++PTRELA+QIE E+ K YH K+VC YGG + Q+N + EIV+ TPGR+NDLV LNL + + D Sbjct: 161 PVIKNFYKEHPAVANMTKEQVANIRKTNNNIEVKYM----------FDEQGNDTEQ---------SSIPNPIETFEQAFEIFPEILEEIRKQRFTKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLLPALIHIEGQPIPRSERNGPNVLVMAPTRELALQIEKEVNKYSYHGFKAVCLYGGGSRKEQVNVVTKGVEIVIATPGRLNDLVESNILNLNSITYLVLD 369 HSP 3 Score: 101.293 bits (251), Expect = 6.889e-18 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 3448 EVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 E ++L + ++YLVLDEADRMLDMGFEPQ+ + D R RQ++MTSATWP+ VR++A YM NP+QV VGSLDL Sbjct: 354 ESNILNLNSITYLVLDEADRMLDMGFEPQIRKTLLDIRPDRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDL 428
BLAST of ATP-dependent RNA helicase vs. Ensembl Cavefish
Match: ddx43 (DEAD-box helicase 43 [Source:NCBI gene;Acc:103021425]) HSP 1 Score: 396.741 bits (1018), Expect = 1.708e-120 Identity = 206/403 (51.12%), Postives = 285/403 (70.72%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQD 2286 +VIP PV F E+F +P+I+ I + FQ+P+PIQ AWP+++ G DLIGIAQTGTGKTLA+LLP FIH++ QP PR K+ GP +L+L+PTRELA+QI+ E KY+Y S+ YGG D+R QI + +IV+ TPGR+ DL+ + ++NL+ ++YLVLDEADRMLDMGFE Q++ +I +R RQTVMTSATWP GV+R+A +++K+P+ V VGTLDL A +TV+Q V +V +K + + + +++P DK++IFV +K DL+ +L L+ + +HGD +Q +RE AL+ + G I++ATD+ASRGLD+ D+T V NYDFP+NIEEYVHRVGRTGRAGR+G + T + + D AAELI IL+ A QEVPD L LM + D Sbjct: 277 RVIPYPVYTFLEAFQHYPEIMENIHRVGFQKPTPIQSQAWPVVLKGLDLIGIAQTGTGKTLAYLLPGFIHMDEQPVPRNKQSGPGMLVLTPTRELALQIEVECNKYSYKGFKSICVYGGGDRRAQIKMVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMTSATWPAGVRRLARSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEEEKKAYVFDFIHNMEPLDKVLIFVGKKIVADDLSSDLCLR----------GIAVQSLHGDREQCDREEALQDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPRNIEEYVHRVGRTGRAGRSGASVTLITRGDWKWAAELIHILERAGQEVPDEL-VLMAERYD 668 HSP 2 Score: 174.481 bits (441), Expect = 2.632e-44 Identity = 91/228 (39.91%), Postives = 128/228 (56.14%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 P+ +NFY E + S EE+ + NNI + DD E + V+P P+ +F E F +PEI++ I + F+ PTPIQ WPV+L G D IGIAQTGTGKTL ++LP IH++ Q PR + GP +L+L+PTRELA+QIE E K Y KS+C YGG ++ QI + +IV+ TPGR+NDL + +NL+ + + D Sbjct: 236 PLKKNFYIEDEAVARRSAEEITVWRKENNNIFV------------------DDLKEGEKRVIP------YPVYTFLEAFQHYPEIMENIHRVGFQKPTPIQSQAWPVVLKGLDLIGIAQTGTGKTLAYLLPGFIHMDEQPVPRNKQSGPGMLVLTPTRELALQIEVECNKYSYKGFKSICVYGGGDRRAQIKMVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLD 439 HSP 3 Score: 95.9005 bits (237), Expect = 1.597e-19 Identity = 43/73 (58.90%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 3454 DLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 +L+ + ++YLVLDEADRMLDMGFEPQ++ II D R RQ++MTSATWP VR++A Y+ +P+ V VG+LDL Sbjct: 426 ELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMTSATWPAGVRRLARSYLKDPMMVYVGTLDL 498
BLAST of ATP-dependent RNA helicase vs. Ensembl Cavefish
Match: ddx43 (DEAD-box helicase 43 [Source:NCBI gene;Acc:103021425]) HSP 1 Score: 329.331 bits (843), Expect = 7.081e-98 Identity = 163/350 (46.57%), Postives = 228/350 (65.14%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVH 2127 +VIP PV F E+F +P+I+ I + FQ+P+PIQ AWP+++ G DLIGIAQTGTGKTLA+LLP FIH++ QP PR K+ GP +L+L+PTRELA+QI+ E KY+Y S+ YGG D+R QI + +IV+ TPGR+ DL+ + ++NL+ ++YLVLDEADRMLDMGFE Q++ +I +R RQTVMTSATWP GV+R+A +++K+P+ V VGTLDL + + + ++ R DL+ +L L+ + +HGD +Q +RE AL+ + G I++ATD+ASRGLD+ D+T V NYDFP+NIEEYVH Sbjct: 245 RVIPYPVYTFLEAFQHYPEIMENIHRVGFQKPTPIQSQAWPVVLKGLDLIGIAQTGTGKTLAYLLPGFIHMDEQPVPRNKQSGPGMLVLTPTRELALQIEVECNKYSYKGFKSICVYGGGDRRAQIKMVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMTSATWPAGVRRLARSYLKDPMMVYVGTLDLAVSWDMFNVLSWENF------------------------LRPLMADDLSSDLCLR----------GIAVQSLHGDREQCDREEALQDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPRNIEEYVH 560 HSP 2 Score: 173.711 bits (439), Expect = 8.025e-45 Identity = 91/228 (39.91%), Postives = 128/228 (56.14%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 P+ +NFY E + S EE+ + NNI + DD E + V+P P+ +F E F +PEI++ I + F+ PTPIQ WPV+L G D IGIAQTGTGKTL ++LP IH++ Q PR + GP +L+L+PTRELA+QIE E K Y KS+C YGG ++ QI + +IV+ TPGR+NDL + +NL+ + + D Sbjct: 204 PLKKNFYIEDEAVARRSAEEITVWRKENNNIFV------------------DDLKEGEKRVIP------YPVYTFLEAFQHYPEIMENIHRVGFQKPTPIQSQAWPVVLKGLDLIGIAQTGTGKTLAYLLPGFIHMDEQPVPRNKQSGPGMLVLTPTRELALQIEVECNKYSYKGFKSICVYGGGDRRAQIKMVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLD 407 HSP 3 Score: 97.4413 bits (241), Expect = 4.063e-20 Identity = 49/93 (52.69%), Postives = 70/93 (75.27%), Query Frame = 1 Query: 3454 DLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS--LYSSL-YHNFLSDII 3723 +L+ + ++YLVLDEADRMLDMGFEPQ++ II D R RQ++MTSATWP VR++A Y+ +P+ V VG+LDL VS +++ L + NFL ++ Sbjct: 394 ELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMTSATWPAGVRRLARSYLKDPMMVYVGTLDLAVSWDMFNVLSWENFLRPLM 486
BLAST of ATP-dependent RNA helicase vs. Ensembl Cavefish
Match: DDX5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:103046784]) HSP 1 Score: 317.39 bits (812), Expect = 1.620e-93 Identity = 192/467 (41.11%), Postives = 274/467 (58.67%), Query Frame = 1 Query: 889 RNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTE-IRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKD 2277 +NFY+EHP +++ ++ E E++ K T +D P PV F E+ F P+ + E I KQ + EP+PIQ WP+ ++G+D++GIAQTG+GKTLA+LLPA +HI QP E GP L+L+PTRELA Q+Q +Y + S YGGA K QI L+ EI + TPGR+ D ++G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K VQ+N+G L L+A H + Q V+ + +K +L+ +L I + E+K IIFV K +C +L + R G A IHGD QQER+ L + G I+IATDVASRGLD+ D+ VINYD+P + E+Y+HR+GRT R+ +TG A+TF N+M A +LI +L++A+Q + L Q+ +D Sbjct: 56 KNFYKEHPDITRRSMQEVEQYRRAKEV-------------------TVKGRD-------------CPKPVMKFNEATF--PNYVMEVINKQAWSEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPF-LEHGDGPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINIGALQLSANHNILQIVDVCNDGEKDDKLIRLLEEIMSEKENKTIIFVETKRRCDELTRRM---RRDGW-------PAMGIHGDKSQQERDWVLNEFKYGKACILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQANDLISVLREANQAINPKLLQMAED 477 HSP 2 Score: 136.732 bits (343), Expect = 5.279e-51 Identity = 80/220 (36.36%), Postives = 116/220 (52.73%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY+EHPDI S++EVE + R + +K DC KP+ F E + + ++++I + PTPIQ GWP+ L G+D +GIAQTG+GKTL ++LPA++HI Q ++ GP L+L+PTRELA Q++ + + +KS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 54 FEKNFYKEHPDITRRSMQEVEQY-RRAKEVTVK---------GRDC---------------------PKPVMKFNEATFPN-YVMEVINKQAWSEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQ-PFLEHGDGPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR 240 HSP 3 Score: 87.0409 bits (214), Expect = 5.279e-51 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ VQ+N+G+L L S HN L Sbjct: 241 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINIGALQL------SANHNIL 314
BLAST of ATP-dependent RNA helicase vs. Ensembl Cavefish
Match: ddx5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:103024726]) HSP 1 Score: 313.153 bits (801), Expect = 4.645e-92 Identity = 191/464 (41.16%), Postives = 270/464 (58.19%), Query Frame = 1 Query: 889 RNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPI-PKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 +NFY+EHP V + T E E++ K EI + + P PV F ES F ++ I KQ + +P+PIQ WP+ ++G+D++GIAQTG+GKTL++LLPA +HI QP E+ GP L+L+PTRELA Q+Q +Y + S YGGA K QI L+ EI + TPGR+ D ++G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K VQ+NVG L L+A H + Q V+ + +K +L+ +L I + E+K IIFV K +C DL + R G A IHGD QQER+ L + G I+IATDVASRGLD+ D+ VIN+D+P N E+Y+HR+GRT R+ +TG A+TF N+M A +L+ +L++A+Q + L Q+ Sbjct: 58 KNFYQEHPDVGRRTPQEVEQYRRSK---------------------------------EITVKGRECPKPVMRFHESNFPS-YVMDVISKQNWTDPTPIQAQGWPLALSGQDMVGIAQTGSGKTLSYLLPAIVHINHQPF-LERGDGPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINVGALQLSANHNILQIVDVCNDGEKEDKLLRLLEEIMSEKENKTIIFVETKRRCDDLTRRM---RRDGW-------PAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQM 476 HSP 2 Score: 134.035 bits (336), Expect = 1.953e-50 Identity = 82/221 (37.10%), Postives = 116/221 (52.49%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY+EHPD+ + +EVE + R I +K +C KP+ F E + ++D+I N+ PTPIQ GWP+ L G+D +GIAQTG+GKTL+++LPA++HI Q P R GP L+L+PTRELA Q++ + + +KS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 56 FEKNFYQEHPDVGRRTPQEVEQYR-RSKEITVK---------GREC---------------------PKPVMRFHESNFPS-YVMDVISKQNWTDPTPIQAQGWPLALSGQDMVGIAQTGSGKTLSYLLPAIVHINHQ--PFLERGDGPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR 242 HSP 3 Score: 87.4261 bits (215), Expect = 1.953e-50 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ VQ+NVG+L L S HN L Sbjct: 243 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINVGALQL------SANHNIL 316
BLAST of ATP-dependent RNA helicase vs. Ensembl Cavefish
Match: ddx46 (DEAD-box helicase 46 [Source:NCBI gene;Acc:103041720]) HSP 1 Score: 283.493 bits (724), Expect = 2.059e-78 Identity = 178/470 (37.87%), Postives = 270/470 (57.45%), Query Frame = 1 Query: 874 FYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIP-KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDL--KDSG-VLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 + +NFY E P +++MT +E ++ L+ ++ I + K P P++ + + +L ++K +++P+PIQ A P +M+GRDLIGIA+TG+GKT+AFLLP F HI Q +P E+ +GP +I++PTRELA+QI E +K++ VVC YGG +QI +LK EI+V TPGR+ D+ +SG V NL+ V+Y+V+DEADRM DMGFE QV+ ++ VR RQTVM SAT+P ++ +A + PV+V VG + C V+QHV ++ K +L+EIL H + + +IIFV ++ L +L K + +HG +DQ +R+ + ++GA +M+AT VA+RGLD+ L V+NY+ P + E+YVHR GRTGRAG G A+TF+ A ++I+ L+ + VP L QL Sbjct: 330 YESYRKNFYVEVPELARMTPEEVNEYRLE--------------------------------LEGITVKGKGCPKPIKTWVQCGTSM-KVLNALKKHNYEKPTPIQSQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQ-RPLEEGEGPIAVIMTPTRELALQITKECKKFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVVDEADRMFDMGFEPQVMRIMDNVRPDRQTVMFSATFPRAMEALARRILNKPVEVQVGGRSV-VCSDVEQHVIVIEEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLM----------KASYPCMSLHGGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGFAYTFITDEQARYAGDIIKALELSGSAVPSELEQL 754 HSP 2 Score: 120.168 bits (300), Expect = 3.717e-43 Identity = 75/211 (35.55%), Postives = 109/211 (51.66%), Query Frame = 2 Query: 2768 HRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLV 3397 +NFY E P++ ++ EEV + L I +K G KPI+++ + ++L+ +K N+E PTPIQ P I+ GRD IGIA+TG+GKT+ F+LP HI Q +P + GP +I++PTRELA+QI E K K ++ VC YGG QI L+ EI+V TPGR+ D++ Sbjct: 334 RKNFYVEVPELARMTPEEVNEYRLELEGITVK------------------------------GKGCPKPIKTWVQC-GTSMKVLNALKKHNYEKPTPIQSQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQ-RPLEEGEGPIAVIMTPTRELALQITKECKKFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDML 512 HSP 3 Score: 77.0258 bits (188), Expect = 3.717e-43 Identity = 33/70 (47.14%), Postives = 51/70 (72.86%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 +V+Y+V+DEADRM DMGFEPQV+ I+++ R RQ++M SAT+P + +A ++ PV+V VG ++ S Sbjct: 524 RVTYVVVDEADRMFDMGFEPQVMRIMDNVRPDRQTVMFSATFPRAMEALARRILNKPVEVQVGGRSVVCS 593
BLAST of ATP-dependent RNA helicase vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006773.1 (pep scaffold:Pmarinus_7.0:GL491147:244:6091:-1 gene:ENSPMAG00000006112.1 transcript:ENSPMAT00000006773.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 264.233 bits (674), Expect = 1.371e-79 Identity = 144/323 (44.58%), Postives = 199/323 (61.61%), Query Frame = 1 Query: 790 PTYLEEEKPIRKRPDNANIKMK-----CTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDL 1743 P + E P RK D +I + K ++ P+ +NFY E PSV++M E L + + + C G + IPNPVR F ++F PDIL I + F PSPIQ AWP+++ G DL+GIAQTGTGKTLAFL P FIH+ QP PRE+R+GP +LIL+PTRELA+QI++E KY+Y I SV YGG ++R+QI +IV+ TPGR+ DL +G ++++ ++YLVLDEAD MLD+GFE Q++ ++ VR RQT MTSATWP GV+R+A +++K+PV V VG+L+L Sbjct: 14 PASEDTENPPRKCVDWTSINERQADFVALKWNDCPPIKKNFYFESPSVTRM---EPWPLLATRKSNNNISVVD-----MCEEGG-----------------RSIPNPVRTFADAFEHFPDILDNICRAGFTTPSPIQSQAWPVVLLGWDLVGIAQTGTGKTLAFLFPGFIHLTLQPIPREQREGPGMLILTPTRELALQIKSECSKYSYQGITSVCIYGGGNRREQIDIATRGVDIVIATPGRLNDLMMNGHISMRGITYLVLDEAD-MLDLGFEPQIMKILLDVRPDRQTTMTSATWPPGVRRLARSYLKDPVLVYVGSLNL 310 HSP 2 Score: 167.162 bits (422), Expect = 1.927e-59 Identity = 90/228 (39.47%), Postives = 127/228 (55.70%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 PI +NFY E P + + + + NNI + ++ C++ G I P+R+F + F P+ILD I F TP+PIQ WPV+L G D +GIAQTGTGKTL F+ P IH+ Q PR+ R GP +LIL+PTRELA+QI+SE K Y I SVC YGG + QI+ +IV+ TPGR+NDL++ G ++++ + + D Sbjct: 49 PIKKNFYFESPSVTRMEPWPLLATRKSNNNISVVDM----------CEE--------------GGRSIPNPVRTFADAFEHFPDILDNICRAGFTTPSPIQSQAWPVVLLGWDLVGIAQTGTGKTLAFLFPGFIHLTLQPIPREQREGPGMLILTPTRELALQIKSECSKYSYQGITSVCIYGGGNRREQIDIATRGVDIVIATPGRLNDLMMNGHISMRGITYLVLD 252 HSP 3 Score: 82.0333 bits (201), Expect = 1.927e-59 Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 ++YLVLDEAD MLD+GFEPQ++ I+ D R RQ+ MTSATWP VR++A Y+ +PV V VGSL+L Sbjct: 246 ITYLVLDEAD-MLDLGFEPQIMKILLDVRPDRQTTMTSATWPPGVRRLARSYLKDPVLVYVGSLNL 310
BLAST of ATP-dependent RNA helicase vs. Ensembl Sea Lamprey
Match: ddx46 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:NCBI gene;Acc:321948]) HSP 1 Score: 281.567 bits (719), Expect = 1.337e-78 Identity = 176/469 (37.53%), Postives = 264/469 (56.29%), Query Frame = 1 Query: 874 FYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDL--KDSG-VLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 + P RNFY E P ++KMT +E + L E+ + K P P++ + + IL ++KQ +++P+PIQ A P +M+GRDLIGIA+TG+GKT+ FLLP F H+ Q +P E+ +GP +I++PTRELA+QI E +K+T VVC YGG +QI +LK EI+V TPGR+ D+ +SG V N + +Y+VLDEADRM DMGFE QV+ +I R RQTVM SAT+P ++ +A + PV+V VG + C V+QHV ++ K +L+E+L + + +I+FV ++ L +L K + +HG +DQ +R+ + +SG +M+AT VA+RGLD+ L V+NYD P + E+YVHRVGRTGRAG G ++TF+ + ++I+ L+ + +P L +L Sbjct: 325 YEPFRRNFYVEVPELAKMTAEEVSAYRL-------------------------------EMEGVMVKGKGCPKPIKTWVQCGISM-KILNTLKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIGFLLPMFRHVMDQ-RPLEEGEGPIGVIMTPTRELALQIAKECRKFTKQLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNFRRATYMVLDEADRMFDMGFEPQVMRIIETSRPDRQTVMFSATFPRAMEALARRILNKPVEVQVGGRSV-VCSDVEQHVIVIEEDTKFYKLLELLGLYQEKGAVIVFVDKQEHADTLLKDLM----------KASYPCLSLHGGIDQYDRDSIINDFKSGVCRLMVATSVAARGLDVKHLIMVVNYDCPNHYEDYVHRVGRTGRAGNKGYSYTFITSEQERYSGDIIKALELSGTPLPPDLERL 749 HSP 2 Score: 129.798 bits (325), Expect = 1.937e-47 Identity = 78/222 (35.14%), Postives = 116/222 (52.25%), Query Frame = 2 Query: 2735 VVYTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLV 3397 V ++ + P RNFY E P++ ++ EEV ++ L +M+K G KPI+++ + +IL+ +K N+E PTPIQ P I+ GRD IGIA+TG+GKT+ F+LP H+ Q +P + GP +I++PTRELA+QI E K K ++ VC YGG QI L+ EI+V TPGR+ D++ Sbjct: 318 VDHSKIAYEPFRRNFYVEVPELAKMTAEEVSAYRLEMEGVMVK------------------------------GKGCPKPIKTWVQCGISM-KILNTLKKQNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIGFLLPMFRHVMDQ-RPLEEGEGPIGVIMTPTRELALQIAKECRKFTKQLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDML 507 HSP 3 Score: 79.337 bits (194), Expect = 1.937e-47 Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 + +Y+VLDEADRM DMGFEPQV+ II +R RQ++M SAT+P + +A ++ PV+V VG ++ S Sbjct: 519 RATYMVLDEADRMFDMGFEPQVMRIIETSRPDRQTVMFSATFPRAMEALARRILNKPVEVQVGGRSVVCS 588
BLAST of ATP-dependent RNA helicase vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006776.1 (pep scaffold:Pmarinus_7.0:GL491147:247:4468:-1 gene:ENSPMAG00000006112.1 transcript:ENSPMAT00000006776.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 249.98 bits (637), Expect = 8.352e-76 Identity = 122/228 (53.51%), Postives = 166/228 (72.81%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQP-----KPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDL 1743 + IPNPVR F ++F PDIL I + F PSPIQ AWP+++ G DL+GIAQTGTGKTLAFL P FIH+ QP +PRE+R+GP +LIL+PTRELA+QI++E KY+Y VC YGG ++R+QI +IV+ TPGR+ DL +G ++++ ++YLVLDEAD MLD+GFE Q++ ++ VR RQT MTSATWP GV+R+A +++K+PV V VG+L+L Sbjct: 5 RSIPNPVRTFADAFEHFPDILDNICRAGFTTPSPIQSQAWPVVLLGWDLVGIAQTGTGKTLAFLFPGFIHLTLQPIQIGGRPREQREGPGMLILTPTRELALQIKSECSKYSYQSCTRSVCIYGGGNRREQIDIATRGVDIVIATPGRLNDLMMNGHISMRGITYLVLDEAD-MLDLGFEPQIMKILLDVRPDRQTTMTSATWPPGVRRLARSYLKDPVLVYVGSLNL 231 HSP 2 Score: 152.14 bits (383), Expect = 4.376e-55 Identity = 78/171 (45.61%), Postives = 108/171 (63.16%), Query Frame = 2 Query: 2951 GTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQ-----MKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHN-IKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 G I P+R+F + F P+ILD I F TP+PIQ WPV+L G D +GIAQTGTGKTL F+ P IH+ Q +PR+ R GP +LIL+PTRELA+QI+SE K Y + +SVC YGG + QI+ +IV+ TPGR+NDL++ G ++++ + + D Sbjct: 3 GGRSIPNPVRTFADAFEHFPDILDNICRAGFTTPSPIQSQAWPVVLLGWDLVGIAQTGTGKTLAFLFPGFIHLTLQPIQIGGRPREQREGPGMLILTPTRELALQIKSECSKYSYQSCTRSVCIYGGGNRREQIDIATRGVDIVIATPGRLNDLMMNGHISMRGITYLVLD 173 HSP 3 Score: 82.4185 bits (202), Expect = 4.376e-55 Identity = 40/66 (60.61%), Postives = 52/66 (78.79%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 ++YLVLDEAD MLD+GFEPQ++ I+ D R RQ+ MTSATWP VR++A Y+ +PV V VGSL+L Sbjct: 167 ITYLVLDEAD-MLDLGFEPQIMKILLDVRPDRQTTMTSATWPPGVRRLARSYLKDPVLVYVGSLNL 231
BLAST of ATP-dependent RNA helicase vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003898.1 (pep scaffold:Pmarinus_7.0:GL481305:13824:21767:-1 gene:ENSPMAG00000003524.1 transcript:ENSPMAT00000003898.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 255.758 bits (652), Expect = 9.045e-74 Identity = 163/434 (37.56%), Postives = 250/434 (57.60%), Query Frame = 1 Query: 1051 ELIDEIPIPKV---IPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHI-EGQP--------------KPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLI----YAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQ 2283 E D+IP+ P + +F E I++ + +++ P+P+Q A PI+ RDL+ AQTG+GKT AFLLP I G P K +++Q P L+L+PTRELA+QI +E +K+ Y + V YGGAD +Q+ +L++ ++V TPGR+ D+ + G + L YLVLDEADRMLDMGFE Q+ ++ + RQT+M SAT+P +Q +A +++ + + VG + +A + Q V +V+ DK L+++L + ++FV K L +G L +G IHGD Q++RE AL + R+G R I++AT VA+RGLDIP++ VIN+D P +IEEYVHR+GRTGR G G+A +F N+ + + EL+ +L +A QEVP +L + ++H+ Sbjct: 40 EKYDDIPVEATGNDCPPHIESFHELELGE-IIMSSVTLCRYERPTPVQKYAIPIIKAKRDLMACAQTGSGKTAAFLLPILSQIYSGGPGKVVEDTKNQQETVKYGQRKQYPMSLVLAPTRELALQIYDEARKFAYRSCVRPCVVYGGADIGNQVRELQKGCHLLVATPGRLVDMMERGKVGLDHCRYLVLDEADRMLDMGFEPQIRRIVEQDVMPTKGDRQTLMFSATFPKEIQILARDFLEDYIFLAVGRVG-SASENITQKVVWVEEMDKRSFLLDLLNATGRDSLTLVFVETKKGADAL---------QGFLCSEG-YSCTSIHGDRSQRDREEALSLFRTGRRPILVATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGQATSFYNEKNENMTRELLHLLVEAHQEVPSWLETMAQEHR 461 HSP 2 Score: 89.3521 bits (220), Expect = 9.041e-30 Identity = 52/151 (34.44%), Postives = 78/151 (51.66%), Query Frame = 2 Query: 3014 ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHI---------------EGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHN-IKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNL 3418 I+ + +E PTP+Q P+I RD + AQTG+GKT F+LP L I + +K Q + P L+L+PTRELA+QI E K Y + ++ YGGA+ Q+ L+ ++V TPGR+ D++ G + L Sbjct: 70 IMSSVTLCRYERPTPVQKYAIPIIKAKRDLMACAQTGSGKTAAFLLPILSQIYSGGPGKVVEDTKNQQETVKYGQRKQYPMSLVLAPTRELALQIYDEARKFAYRSCVRPCVVYGGADIGNQVRELQKGCHLLVATPGRLVDMMERGKVGL 220 HSP 3 Score: 60.4622 bits (145), Expect = 9.041e-30 Identity = 30/66 (45.45%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 3481 YLVLDEADRMLDMGFEPQVVSIIND----TRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSL 3666 YLVLDEADRMLDMGFEPQ+ I+ T+ RQ++M SAT+P+ ++ +A ++++ + + VG + Sbjct: 225 YLVLDEADRMLDMGFEPQIRRIVEQDVMPTKGDRQTLMFSATFPKEIQILARDFLEDYIFLAVGRV 290
BLAST of ATP-dependent RNA helicase vs. Ensembl Sea Lamprey
Match: ddx42 (DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]) HSP 1 Score: 254.603 bits (649), Expect = 1.727e-71 Identity = 160/389 (41.13%), Postives = 224/389 (57.58%), Query Frame = 1 Query: 1087 PNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYT-YHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVE-YVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEV 2247 P P +F FD +L IRK +F +P+PIQC PI ++GRD+IGIA+TG+GKT +F+ P +HI Q K + GP LI PTREL QI E +++ +++ SV YGG +Q L+E EIVV TPGR+ D NL+ V+YLV DEADRM DMGFE QV ++ VR RQT++ SAT+ V+++A + +P++V G + A V Q VE + + K L L ++IFV RK +L+ +L + + +HGD+DQ ER + + IM+ATDVA+RGLDIP + V+NYD ++I+ + HRVGRTGRAG G AFT M DM+ A +L+R L+ A+Q V Sbjct: 245 PKPCSSFGHFGFDE-QLLNLIRKSEFTQPTPIQCQGIPIALSGRDIIGIAKTGSGKTASFIWPMLVHIMAQ-KELKPGDGPIGLICVPTRELCQQINVECKRFGKAYNLHSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTMLYSATFRMRVEKLARDILIDPIRVVQGDIG-EANEDVTQRVEIFSNGAAKWNWLCSHLVEFTSSGSVLIFVTRKDNSEELSNDL----------EQEGFQVGLLHGDMDQSERNKVISDFKKKVIPIMVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRVGRTGRAGEKGTAFTLMTHKDMNFAGDLVRNLEGANQHV 620 HSP 2 Score: 127.487 bits (319), Expect = 1.741e-41 Identity = 88/241 (36.51%), Postives = 118/241 (48.96%), Query Frame = 2 Query: 2732 SVVYTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQ--MKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 S+ ++++ P +NFY EH +I +L E ELK +V P KP SF F ++L++I+ F PTPIQC G P+ L GRD IGIA+TG+GKT +F+ P L+HI Q +KP GP LI PTREL QI E + K +N+ SV YGG Q +L++ EIVV TPGR+ D V NL+ V +FD Sbjct: 202 SIDHSEIEYEPFDKNFYVEHEEISSLGASEAH------------ELK---------------------AQVSGAAP--PKPCSSFGH-FGFDEQLLNLIRKSEFTQPTPIQCQGIPIALSGRDIIGIAKTGSGKTASFIWPMLVHIMAQKELKPGD---GPIGLICVPTRELCQQINVECKRFGKAYNLHSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFD 403 HSP 3 Score: 61.6178 bits (148), Expect = 1.741e-41 Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSL 3666 +V+YLV DEADRM DMGFE QV SI N R RQ+++ SAT+ V ++A + +P++V G + Sbjct: 396 RVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTMLYSATFRMRVEKLARDILIDPIRVVQGDI 460
BLAST of ATP-dependent RNA helicase vs. Ensembl Yeast
Match: DBP2 (ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; interacts with YRA1; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites [Source:SGD;Acc:S000005056]) HSP 1 Score: 325.865 bits (834), Expect = 2.651e-98 Identity = 186/403 (46.15%), Postives = 259/403 (64.27%), Query Frame = 1 Query: 1084 IPNPVRNFEESFFDHPD-ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQP--KPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEIL--AHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMK 2274 IP P+ F+E+ F PD +L E++ + F +P+ IQC WP+ ++GRD++GIA TG+GKTL++ LP +HI QP P + GP VL+L+PTRELA+QIQ E K+ + I + YGG K QI L EIV+ TPGR+ D+ + G NLK V+YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A ++ +P+QV VG+L+L+A H + Q VE V +K RL + L A E K +IF + K C D+ L R G A IHGD DQ+ER+ L+ R+G IM+ATDVA+RG+D+ + VINYD P NIE+YVHR+GRTGRAG TG A +F + + A+LI I+++A+Q +P P+L+K Sbjct: 108 IPKPITTFDEAGF--PDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGD---GPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYL---REDGW-------PALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIP---PELLK 492 HSP 2 Score: 145.976 bits (367), Expect = 8.129e-37 Identity = 89/231 (38.53%), Postives = 124/231 (53.68%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQ--MKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHN-IKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 +NFY EH +R+ S E+ F RK N M P KPI +F+E + P+ +L+ +KA F+ PT IQC GWP+ L GRD +GIA TG+GKTL++ LP ++HI Q + P GP VL+L+PTRELA+QI++E K + + I++ C YGG K QI L EIV+ TPGR+ D++ +G NLK V + D Sbjct: 73 FEKNFYVEHESVRDRSDSEIAQF--RKENEMTISGHDIP-----------------------------KPITTFDEAGF--PDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGD---GPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLD 267 HSP 3 Score: 94.3597 bits (233), Expect = 3.404e-20 Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 3451 VDLLIIIK-----VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 +D+L I K V+YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ V+Q+A Y+++P+QV VGSL+L S Sbjct: 248 IDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSAS 329
BLAST of ATP-dependent RNA helicase vs. Ensembl Yeast
Match: DBP3 (RNA-Dependent ATPase, member of DExD/H-box family; involved in cleavage of site A3 within the ITS1 spacer during rRNA processing; not essential for growth, but deletion causes severe slow-growth phenotype [Source:SGD;Acc:S000003046]) HSP 1 Score: 266.929 bits (681), Expect = 5.583e-78 Identity = 170/404 (42.08%), Postives = 249/404 (61.63%), Query Frame = 1 Query: 1120 FDHPDILTEIRKQ--KFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAV-RRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLD-LNACHTVKQHVEYVDYHDKTQRLVEILA--HIKPE--DKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL-----MKDHQDY 2289 FD+ + + I+ + KF +P+PIQ +AWP L++G+D++G+A+TG+GKT AF +PA H+ +K++G VL++SPTRELA QI + + T C YGG K +Q QLK++ ++VV TPGR+ DL G ++L V+YLVLDEADRML+ GFE + N+I +RQT+M +ATWP V+ +A T M NP++V++G D L A + Q VE VD K ++L+E+L H P+ +K++IF K + + + E LK + IHGDL QQ+R AL +SG N+++ATDVA+RGLDIP++ VIN FP +E+YVHR+GRTGRAG+TG A T + + A L+ +L A+Q VP+ L + K+H Y Sbjct: 116 FDYLSLDSSIQAEISKFPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMND----QKKRGIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARV--ERNLKYN--------GYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDLIKFGTHTKKKEHSAY 504 HSP 2 Score: 107.457 bits (267), Expect = 3.620e-40 Identity = 65/178 (36.52%), Postives = 98/178 (55.06%), Query Frame = 2 Query: 2897 DCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCC-YGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDV 3427 D D++ F E+++ V +P+ SF+ + +I K F PTPIQ + WP +L G+D +G+A+TG+GKT F +PA+ H+ K R G VL++SPTRELA QI ++ + CC YGG K Q L+ + ++VV TPGR+ DL+ G ++L V Sbjct: 90 DIDEY---FKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK---FPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKR----GIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQV 256 HSP 3 Score: 76.6406 bits (187), Expect = 3.620e-40 Identity = 34/71 (47.89%), Postives = 56/71 (78.87%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDT-RKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 +V+YLVLDEADRML+ GFE + +II +T +RQ++M +ATWP+ VR++A +M+NP++V++G+ D + + Sbjct: 255 QVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTA 325
BLAST of ATP-dependent RNA helicase vs. Ensembl Yeast
Match: DED1 (ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase; required for translation initiation of all yeast mRNAs; binds to mRNA cap-associated factors, and binding stimulates Ded1p RNA-dependent ATPase activity; mutation in human homolog DBY is associated with male infertility; human homolog DDX3X complements ded1 null mutation; DED1 has a paralog, DBP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005730]) HSP 1 Score: 268.085 bits (684), Expect = 1.703e-77 Identity = 168/430 (39.07%), Postives = 249/430 (57.91%), Query Frame = 1 Query: 1060 DEIPI---PKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIH-IEGQPKPREKRQG--------PTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLI----YAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYRIN 2298 D+IP+ K +P P+ F D +L I+ +F +P+P+Q + PI+ GRDL+ AQTG+GKT FL P + P P+ + QG PT +I++PTRELA QI +E +K+TY + + V YGG+ +Q+ +++ +++V TPGR+ DL + G ++L +V YLVLDEADRMLDMGFE Q+ +++ +RQT+M SAT+P +Q +A + + + ++VG + + + Q V YV+ DK L+++L+ + +IFV K L L ++ +A IHGD Q ERE AL RSGA +++AT VA+RGLDIP++T VINYD P ++++YVHR+GRTGRAG TG A F N + + L IL +A+QEVP FL M R N Sbjct: 126 DDIPVDASGKDVPEPITEFTSPPLDGL-LLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVG-STSENITQKVLYVENQDKKSALLDLLS-ASTDGLTLIFVETKRMADQLTDFLIMQN----------FRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLKDAMMSAPGSRSN 542 HSP 2 Score: 98.2117 bits (243), Expect = 3.055e-21 Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 2 Query: 3014 ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHI---------EGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHN-IKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDV 3427 +L+ IK F PTP+Q P++ GRD + AQTG+GKT F+ P L E Q Q + PT +I++PTRELA QI E K Y + +K+ YGG+ Q+ + +++V TPGR+NDL+ G ++L +V Sbjct: 153 LLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANV 300 HSP 3 Score: 63.929 bits (154), Expect = 1.300e-10 Identity = 35/84 (41.67%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 3421 RRNTVVIRYEVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTR----KQRQSIMTSATWPECVRQIALLYMDNPVQVNVG 3660 R N ++ R ++ L V YLVLDEADRMLDMGFEPQ+ I+ D +RQ++M SAT+P ++ +A ++ + + ++VG Sbjct: 285 RLNDLLERGKISL---ANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVG 365
BLAST of ATP-dependent RNA helicase vs. Ensembl Yeast
Match: DBP1 (Putative ATP-dependent RNA helicase of the DEAD-box protein family; mutants show reduced stability of the 40S ribosomal subunit scanning through 5' untranslated regions of mRNAs; protein abundance increases in response to DNA replication stress; DBP1 has a paralog, DED1, that arose from the whole genome duplication [Source:SGD;Acc:S000006040]) HSP 1 Score: 264.618 bits (675), Expect = 3.012e-76 Identity = 168/422 (39.81%), Postives = 246/422 (58.29%), Query Frame = 1 Query: 1060 DEIPI---PKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHI-EGQPKPR-EKRQG-------PTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLI----YAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMK 2274 D IP+ K +P P+ +F D ++ I+ F +P+P+Q + PI+ GRDL+ AQTG+GKT FL P F + P P EK Q P+ L+L+PTRELA QI E +K+TY + V YGGA +Q+ ++ +++V TPGR+ DL + G ++L ++ YLVLDEADRMLDMGFE Q+ +++ RQT+M SAT+P +Q +A + N + ++VG + + + Q + YVD DK L+++L+ + + +IFV K L L ++ KA IHGD Q ERE AL ++ +I++AT VA+RGLDIP++T VINYD P +I++YVHR+GRTGRAG TG A +F N N+ + L+ IL +A+QEVP FL L + Sbjct: 138 DNIPVDASGKDVPEPILDFSSPPLDEL-LMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVG-STSENITQRILYVDDMDKKSALLDLLS-AEHKGLTLIFVETKRMADQLTDFLIMQN----------FKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFLSDLSR 546 HSP 2 Score: 90.1225 bits (222), Expect = 1.200e-18 Identity = 50/148 (33.78%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 3014 ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHI---------EGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHN-IKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDV 3427 +++ IK +F PTP+Q P++ GRD + AQTG+GKT F+ P + E + P+ L+L+PTRELA QI E K Y + ++ YGGA Q+ + +++V TPGR+NDL+ G ++L ++ Sbjct: 165 LMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANI 312 HSP 3 Score: 66.6254 bits (161), Expect = 1.928e-11 Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 3421 RRNTVVIRYEVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIIND----TRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSL 3666 R N ++ R +V L + YLVLDEADRMLDMGFEPQ+ I+ + + + RQ++M SAT+P ++ +A ++DN + ++VG + Sbjct: 297 RLNDLLERGKVSL---ANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRV 379
BLAST of ATP-dependent RNA helicase vs. Ensembl Yeast
Match: PRP28 (RNA binding protein; involved in RNA isomerization at the 5' splice site and for exchange of U6 for U1 snRNA at the 5' splice site; similar to the RNA helicases of the DEAD-box family [Source:SGD;Acc:S000002651]) HSP 1 Score: 216.853 bits (551), Expect = 2.732e-60 Identity = 155/408 (37.99%), Postives = 232/408 (56.86%), Query Frame = 1 Query: 1084 IPNPVRNFEESFFDHPDIL-TEIRKQKFQEPSPIQCIAWPILMTG---RDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKR----QGPTVLILSPTRELAIQIQNEVQKYTY-------HDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAV------RRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDY-HDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMN-KNDMSNAAELIRILQDAD 2238 + NP+RN+EE D+L I++ +F P+PIQ I P + RD +G+A TG+GKTLAF++P I + P PR GP LIL+PTREL QIQ E QK T +D + GG + + L E +I+V TPGR+ D ++ +L +K V LVLDEAD+M+D+GFE QV N++ V RQT+M +AT +++IA +M+ PV +G ++ + ++Q VEY D DK ++L I+A P IIIF+ K Q +D E F K + +K +HG Q++RE +L++ R+ IMIAT+VA+RGLDIP+++ V+N+ K +++Y+HR+GRTGRA G A +F++ D S EL + ++ D Sbjct: 167 VENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSP-PRPPSLKIIDGPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIG-VETGSEPLIQQVVEYADNDEDKFKKLKPIVAKYDPP--IIIFINYK-QTADWLAEKFQKETN--------MKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIRELYKYVRKHD 561 HSP 2 Score: 86.6557 bits (213), Expect = 1.184e-17 Identity = 64/171 (37.43%), Postives = 96/171 (56.14%), Query Frame = 2 Query: 2963 IAKPIRSFEEMFWKHPEILD-IIKALNFETPTPIQCIGWPVILGG---RDFIGIAQTGTGKTLTFVLPALIHIEGQMKPR----QYRYGPTVLILSPTRELAMQIESEILKI-------KYHNIKSVCCYGGAEKMYQIN-SLRDNPEIVVGTPGRINDLVLMGCLNLKDV 3427 + P+R++EE+ ++L II+ L F +PTPIQ I P + RDF+G+A TG+GKTL FV+P LI + + PR + GP LIL+PTREL QI+ E K+ ++ K + GG + +I+ SL + +I+V TPGR+ D + L +K V Sbjct: 167 VENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKM-SRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGG-HSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQV 335 HSP 3 Score: 60.077 bits (144), Expect = 2.360e-9 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 3448 EVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIIN------DTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVG 3660 E LL++ +V LVLDEAD+M+D+GFE QV +I+ D+ RQ++M +AT + +IA YM PV +G Sbjct: 326 ENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIG 402
BLAST of ATP-dependent RNA helicase vs. Ensembl Nematostella
Match: EDO39699 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9G4]) HSP 1 Score: 406.371 bits (1043), Expect = 2.417e-128 Identity = 215/420 (51.19%), Postives = 288/420 (68.57%), Query Frame = 1 Query: 1078 KVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYL-----------VLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEE-----YVHXXXXXX--XXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQ 2283 + IPNPV FEE+F +P+IL EI+K F +PSPIQC AWP++M+G DLIGIAQTGTGKTLAFLLPAF+HI+GQ REKR GP+VL+LSPTRELA+QI+ EV+KY Y I SV YGG ++DQI +++ EIV+ TPGR+ DL +L+++ V+YL VLDEADRMLDMGFE ++ ++ +R RQTVMTSATWP GVQR+A +M +PV+V VG LDLNAC V Q VE VD K +R++E + + P +K++IFV +K DL+ +L L G+ C IHGD +Q +RE AL ++G I+IATDVASRGLDI D+T VINYDFP++IEE Y+ + + R+G + TF+++ D +A +LI+I+ A+QEVPDFL + K ++ Sbjct: 16 RAIPNPVTKFEEAFEQYPEILEEIKKAGFVKPSPIQCQAWPVVMSGMDLIGIAQTGTGKTLAFLLPAFLHIDGQELAREKRGGPSVLVLSPTRELALQIEQEVKKYHYRGIRSVCIYGGGSRKDQIGVVEKGVEIVIATPGRLNDLLMHDILSVRSVTYLVSMSGHNICSIVLDEADRMLDMGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDLNACENVTQLVEEVDGSLKKERVIEFIEGMAPGEKVLIFVGKKVLADDLSSDLMLHGIDGV--------QC-IHGDREQYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEEGGGGCYLTQTLSLSFCFSSRSGTSLTFISREDWRSAHKLIKIMVQANQEVPDFLHDMAKRYE 426 HSP 2 Score: 180.644 bits (457), Expect = 7.160e-64 Identity = 84/156 (53.85%), Postives = 109/156 (69.87%), Query Frame = 2 Query: 2960 GIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDV 3427 I P+ FEE F ++PEIL+ IK F P+PIQC WPV++ G D IGIAQTGTGKTL F+LPA +HI+GQ R+ R GP+VL+LSPTRELA+QIE E+ K Y I+SVC YGG + QI + EIV+ TPGR+NDL++ L+++ V Sbjct: 17 AIPNPVTKFEEAFEQYPEILEEIKKAGFVKPSPIQCQAWPVVMSGMDLIGIAQTGTGKTLAFLLPAFLHIDGQELAREKRGGPSVLVLSPTRELALQIEQEVKKYHYRGIRSVCIYGGGSRKDQIGVVEKGVEIVIATPGRLNDLLMHDILSVRSV 172 HSP 3 Score: 84.3445 bits (207), Expect = 7.160e-64 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 3454 DLLIIIKVSYLV-----------LDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 D+L + V+YLV LDEADRMLDMGFEP++ I+ D R RQ++MTSATWP V+++A YM +PV+V VG LDL Sbjct: 165 DILSVRSVTYLVSMSGHNICSIVLDEADRMLDMGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDL 248
BLAST of ATP-dependent RNA helicase vs. Ensembl Nematostella
Match: EDO38061 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SDX5]) HSP 1 Score: 302.368 bits (773), Expect = 9.099e-91 Identity = 180/392 (45.92%), Postives = 243/392 (61.99%), Query Frame = 1 Query: 1084 IPNPVRNFEESFFDHPD-ILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYH-DIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEV 2247 +P PV FEES F PD I + +++ F EP+ IQ WP+ +TGR+L+GIAQTG+GKTL+F+LP +HI QP + GP VL+L PTRELA Q+Q H + S YGGA K QI +L+ EI + TPGR+ D+ +S NL+ +YLVLDEADRMLDMGFE Q+ +I +R RQT+M SATWP VQ +A + + V + VG+L L A H + Q V+ + H+K +L+++L I + E+K +IF K + +L +L RS G A IHGD Q ER+ L R G I++ATDVASRGLDI D+ VIN+DFP E+YVHR+GRT R+ RTG ++TF N+ A EL+ +LQ+A Q V Sbjct: 53 VPKPVTTFEESAF--PDYIQSYFKREGFTEPTMIQAQGWPVALTGRNLVGIAQTGSGKTLSFILPGIVHINHQPL-LQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLTANHKILQIVDVCEDHEKEHKLLKLLEEIMGEKENKTLIFTETKRRADELTRKL---RSDGW-------PAMCIHGDKAQPERDWVLSEFRKGHAPILVATDVASRGLDISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKELVSVLQEAKQHV 431 HSP 2 Score: 124.79 bits (312), Expect = 4.317e-46 Identity = 79/221 (35.75%), Postives = 113/221 (51.13%), Query Frame = 2 Query: 2771 RNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQ--MKPRQYRYGPTVLILSPTRELAMQIESEILKIKYH-NIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY EHP ++ EV+++ R++ + + P KP+ +FEE + P+ I K F PT IQ GWPV L GR+ +GIAQTG+GKTL+F+LP ++HI Q ++P GP VL+L PTRELA Q++ + H ++S C YGGA K QI L EI + TPGR+ D++ NL+ Sbjct: 20 KNFYREHPVVQARGQHEVDAY--RRSKDLTVNGRNVP-----------------------------KPVTTFEESAF--PDYIQSYFKREGFTEPTMIQAQGWPVALTGRNLVGIAQTGSGKTLSFILPGIVHINHQPLLQPGD---GPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLIDMLESRKTNLR 204 HSP 3 Score: 80.4925 bits (197), Expect = 4.317e-46 Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 + +YLVLDEADRMLDMGFEPQ+ +II+ R RQ++M SATWP+ V+ +A ++ + V + VGSL L + Sbjct: 205 RCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLTAN 274
BLAST of ATP-dependent RNA helicase vs. Ensembl Nematostella
Match: EDO42894 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S034]) HSP 1 Score: 277.33 bits (708), Expect = 1.711e-78 Identity = 179/478 (37.45%), Postives = 277/478 (57.95%), Query Frame = 1 Query: 874 FYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPI-PKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTY-HDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDL---KDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYR 2292 + P ++FY E P ++KMT +E ++F L ++ I + K P PV+ + ++ IL ++K +++P+PIQ A P++M+GRD+IGIA+TG+GKTLAFL+P F HI+ QP P E+ +GP ++++PTRELAIQI E +K+ +++ V YGG +QI +LK EI+V TPGR+ D+ + V N + +YLVLDEADRM DMGFE QV+ +I +R RQTVM SAT+P ++ +A + P+++ VG + C V+Q+V ++ DK +L+E+L + + +++FV K +D F+ LKRS L +HG +DQ +R+ + ++G +MIAT VA+RGLD+ L V+NYD P + E+YVHRVGRTGRAG G A+TF+ A ++I+ L+ A+ VP+ + L + + R Sbjct: 93 YQPFRKDFYVEVPELAKMTPEETDEFRLS--------------------------------LENIHVRGKNAPKPVKTWAQTGV-QLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIGIAKTGSGKTLAFLIPMFRHIKDQP-PLEREEGPIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVGGRSV-VCSDVEQNVVVIEEDDKFLKLLELLGLYQEQGSVLVFV-EKQDSADSLFKDLLKRSYPCLS---------LHGGMDQFDRDSTIADFKNGVTKLMIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRVGRTGRAGNKGTAYTFLTPEQGRFAIDVIKALEMAENPVPEDVRNLANTYIETR 525 HSP 2 Score: 129.028 bits (323), Expect = 1.699e-46 Identity = 80/223 (35.87%), Postives = 121/223 (54.26%), Query Frame = 2 Query: 2732 SVVYTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLV 3397 +VVY P ++FY E P++ ++ EE + F L NI ++ K P KP++++ + + +ILD++K ++E PTPIQ PVI+ GRD IGIA+TG+GKTL F++P HI+ Q P + GP ++++PTRELA+QI E K K +N++ VC YGG QI L+ EI+V TPGR+ D++ Sbjct: 90 TVVYQ-----PFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRG-KNAP-----------------------------KPVKTWAQTGVQL-KILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIGIAKTGSGKTLAFLIPMFRHIKDQ-PPLEREEGPIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDML 275 HSP 3 Score: 77.7962 bits (190), Expect = 1.699e-46 Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVS 3681 + +YLVLDEADRM DMGFEPQV+ II+ R RQ++M SAT+P + +A +D P+++ VG ++ S Sbjct: 287 RCTYLVLDEADRMFDMGFEPQVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEIQVGGRSVVCS 356
BLAST of ATP-dependent RNA helicase vs. Ensembl Nematostella
Match: EDO43557 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RY08]) HSP 1 Score: 261.151 bits (666), Expect = 1.271e-75 Identity = 188/525 (35.81%), Postives = 272/525 (51.81%), Query Frame = 1 Query: 751 PSESYVQDDDW-------GIPTYLEEEKPIRKRP--DNANIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYT-YHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVE-YVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYR 2292 P SY D+D G P E+ K I P D++ I K P ++NFY EHP ++K + E + + + + SF +FG FD+ ++ IRK ++ +P+ IQC A PI ++GRD+IGIA+TG+GKT AFL PA +HI QP+ + GP VLI +PTREL QI E +++ ++I V +GG +K +Q L+E EIVV TPGR+ D + NL V+YLV DEADRM DMGFE QV ++ VR RQT++ SAT+ V+ + + +PV+V +G L A V Q V + K + L + L ++IFV +K +LA L K + +HGD+DQ ER L + I++ATDVA+RGLDIP + VINYD ++I + HR+GRTGRAG G A+T + ++D + A +L+R L+ A+Q VP+ L L + +R Sbjct: 21 PVVSYTDDEDLEIEYDSDGNPIVPEKSKIIEPLPRVDHSEIDYK--------PFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFG---FDEQ------------------------------MMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPE-LQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQTLLFSATFKKKVEHLCRDILVDPVRVVIGELG-EANEDVTQIVHIFNSMPSKWEWLTQNLVSFASAGSVLIFVTKKLNSEELATNL----------RKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVATDVAARGLDIPSIKTVINYDVARDITTHTHRIGRTGRAGEKGNAYTLLTQSDQNFAGDLVRNLEIANQVVPESLMALAMKNSWFR 492 HSP 2 Score: 133.265 bits (334), Expect = 1.880e-45 Identity = 86/238 (36.13%), Postives = 122/238 (51.26%), Query Frame = 2 Query: 2735 VVYTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVIQ*LFD 3445 V ++++ P ++NFYEEHP+I S +E++ L +K I + +P P I+ F+E +++ I+ L + PT IQC P+ L GRD IGIA+TG+GKT F+ PAL+HI Q + Q GP VLI +PTREL QI +E + K +NI V +GG K Q +L++ EIVV TPGR+ D V NL V +FD Sbjct: 56 VDHSEIDYKPFNKNFYEEHPEITKQSKQEIDD-LRKKMGIKVS-------------------------GAMPARPCISFAHFGFDE------QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPE-LQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFD 260 HSP 3 Score: 69.707 bits (169), Expect = 1.880e-45 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSL 3666 +V+YLV DEADRM DMGFEPQV SI N+ R RQ+++ SAT+ + V + + +PV+V +G L Sbjct: 253 RVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQTLLFSATFKKKVEHLCRDILVDPVRVVIGEL 317
BLAST of ATP-dependent RNA helicase vs. Ensembl Nematostella
Match: PL10 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SM49]) HSP 1 Score: 263.848 bits (673), Expect = 4.426e-75 Identity = 169/423 (39.95%), Postives = 247/423 (58.39%), Query Frame = 1 Query: 1051 ELIDEIPIPKVIPNPVRNFEESFFDHPDI----LTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAF--IHIEGQPKPRE------KRQGPTVLILSPTRELAIQIQNEVQKYTYHDI-DSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLI----YAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 E D+IP+ +N E F+ D+ L + +++P+P+Q A PI+ RDL+ AQTG+GKT AFL+P I++EG P P + +RQ P L+L+PTRELA+QI +E +K++Y + V YGGAD Q+ +L N ++V TPGR+ D+ D G + L + +LVLDEADRMLDMGFE Q+ ++ RQT+M SAT+P +Q +A ++N + + VG + + + Q V +VD DK L+++L P+ ++FV K A E+FL K IHGD Q+ERE AL+ R G I++AT VA+RGLDIP++ VIN+D P +IEEYVHR+GRTGR G TG A +F N + + A EL+ IL+++ QE+P +L + Sbjct: 173 EKYDDIPVEATGQECPKNIE--LFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPILSRIYMEGPPAPPDIKHAGRRRQYPICLVLAPTRELAVQIFDEARKFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKVG-STSENITQKVVWVDEFDKRSFLLDLLNASGPQQLTLVFVETKKGAD--ALEMFLA--------KDGYYCTSIHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIGRTGRVGHTGLATSFFNHKNKNVAKELMDILEESKQEIPSWLESM 582 HSP 2 Score: 94.7449 bits (234), Expect = 2.244e-30 Identity = 56/150 (37.33%), Postives = 83/150 (55.33%), Query Frame = 2 Query: 3014 ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPAL--IHIEGQMKP---------RQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVC-CYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDV 3427 +L + ++ PTP+Q P++ G RD + AQTG+GKT F++P L I++EG P RQY P L+L+PTRELA+QI E K Y ++ C YGGA+ Q+ L N ++V TPGR+ D++ G + L + Sbjct: 203 LLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPILSRIYMEGPPAPPDIKHAGRRRQY---PICLVLAPTRELAVQIFDEARKFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSI 349 HSP 3 Score: 58.151 bits (139), Expect = 2.244e-30 Identity = 30/68 (44.12%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIIN-DTRKQ---RQSIMTSATWPECVRQIALLYMDNPVQVNVGSL 3666 + +LVLDEADRMLDMGFEPQ+ I++ D+ + RQ++M SAT+P+ ++ +A +++N + + VG + Sbjct: 349 IRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYIFLAVGKV 416
BLAST of ATP-dependent RNA helicase vs. Ensembl Medaka
Match: ddx43 (DEAD-box helicase 43 [Source:NCBI gene;Acc:101166328]) HSP 1 Score: 390.193 bits (1001), Expect = 5.213e-119 Identity = 219/471 (46.50%), Postives = 309/471 (65.61%), Query Frame = 1 Query: 880 PVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYR 2292 P+ + FY E SVS +T +E ++ D + F D E + P IPNP R F E+F +P+I+ I + F P+PIQ AWP+L++G DLI IAQTGTGKTLA+LLP FIH++GQP PR + GP +L+L+PTRELA+QI+ E +KY+Y S+ YGG D+R QI +K +IV+ TPGR+ DL+ + ++NL ++YLVLDEADRMLDMGFE Q++ ++ +R RQTVMTSATWP GV+R+A +++KNP+ V VGTLDL A TV+Q + V +K +++ + ++ P+DK IIFV +K + DL+ +L L +GL AV++ +HGD +Q++RE ALK + I++ATD+ASRGLD+ D+T V NYDFP+NIEEYVHRVGRTGRAGR+G A T + + D A ELI IL+ + QEVP L + + ++ ++ Sbjct: 176 PLKKKFYCEAESVSALTPEEVAEWRKDN--------------------NNIFVDDLMEGGERRP----IPNPCRTFLEAFERYPEIMENIDRVGFVRPTPIQSQAWPVLLSGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPRAEWGGPGMLVLTPTRELALQIETECKKYSYKGYKSICIYGGGDRRGQINLVKSGVDIVIATPGRLNDLQMNELINLFSITYLVLDEADRMLDMGFEPQIMKILLDIRPDRQTVMTSATWPSGVRRLAKSYLKNPMMVYVGTLDLAAVDTVQQTITIVQEEEKKAFVMDFIRNMLPQDKAIIFVGKKIKADDLSSDLCL---QGL-----AVQS--LHGDREQRDREEALKDFKESRVRILVATDLASRGLDVHDITHVFNYDFPRNIEEYVHRVGRTGRAGRSGAAVTLVTREDWRMAPELIPILERSGQEVPHELVLMAERYEKHK 612 HSP 2 Score: 169.474 bits (428), Expect = 3.280e-64 Identity = 91/219 (41.55%), Postives = 125/219 (57.08%), Query Frame = 2 Query: 2762 PIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNL 3418 P+ + FY E + L+ EEV + NNI + +L + E P I P R+F E F ++PEI++ I + F PTPIQ WPV+L G D I IAQTGTGKTL ++LP IH++GQ PR GP +L+L+PTRELA+QIE+E K Y KS+C YGG ++ QIN ++ +IV+ TPGR+NDL + +NL Sbjct: 176 PLKKKFYCEAESVSALTPEEVAEWRKDNNNIFVDDLM-------------------EGGERRP----IPNPCRTFLEAFERYPEIMENIDRVGFVRPTPIQSQAWPVLLSGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPRAEWGGPGMLVLTPTRELALQIETECKKYSYKGYKSICIYGGGDRRGQINLVKSGVDIVIATPGRLNDLQMNELINL 371 HSP 3 Score: 98.2117 bits (243), Expect = 3.280e-64 Identity = 43/73 (58.90%), Postives = 58/73 (79.45%), Query Frame = 1 Query: 3454 DLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 +L+ + ++YLVLDEADRMLDMGFEPQ++ I+ D R RQ++MTSATWP VR++A Y+ NP+ V VG+LDL Sbjct: 367 ELINLFSITYLVLDEADRMLDMGFEPQIMKILLDIRPDRQTVMTSATWPSGVRRLAKSYLKNPMMVYVGTLDL 439
BLAST of ATP-dependent RNA helicase vs. Ensembl Medaka
Match: ddx5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:101160075]) HSP 1 Score: 322.398 bits (825), Expect = 3.038e-95 Identity = 185/401 (46.13%), Postives = 255/401 (63.59%), Query Frame = 1 Query: 1087 PNPVRNFEESFFDHPDILTE-IRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKD 2277 PNP+ +F E+ F P + E I KQ + EP+PIQ WP+ ++G+D++GIAQTG+GKTL++LLPA +HI QP E+ GP L+L+PTRELA Q+Q +Y + S YGGA K QI L+ EI + TPGR+ D +SG NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K VQ+NVG L L+A H + Q V+ +K +LV +L I + E+K IIFV K +C DL + R G A IHGD QQER+ L + G I+IATDVASRGLD+ D+ VINYD+P N E+Y+HR+GRT R+ +TG A+TF N+M A++LI +L++A+Q + L Q+ +D Sbjct: 98 PNPITHFHEASF--PSYVMEVINKQNWTEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPF-LERGDGPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINVGALQLSANHNILQIVDVCTDGEKENKLVRLLEEIMSEKENKTIIFVETKRRCDDLTRRM---RRDGW-------PAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYDYPNNSEDYIHRIGRTARSSKTGTAYTFFTANNMRQASDLIAVLREANQAINPKLLQMAED 485 HSP 2 Score: 130.568 bits (327), Expect = 2.203e-49 Identity = 78/221 (35.29%), Postives = 115/221 (52.04%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY++H D+ S +EVE + R+ ++ + + P PI F E + ++++I N+ PTPIQ GWP+ L G+D +GIAQTG+GKTL+++LPA++HI Q P R GP L+L+PTRELA Q++ + + +KS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 62 FEKNFYQQHADVARRSPQEVEQY--RRTKVITVKGRECPN-----------------------------PITHFHEASFPS-YVMEVINKQNWTEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQ--PFLERGDGPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLR 248 HSP 3 Score: 87.4261 bits (215), Expect = 2.203e-49 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ VQ+NVG+L L S HN L Sbjct: 249 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINVGALQL------SANHNIL 322
BLAST of ATP-dependent RNA helicase vs. Ensembl Medaka
Match: DDX5 (probable ATP-dependent RNA helicase DDX5 [Source:NCBI gene;Acc:101167926]) HSP 1 Score: 310.457 bits (794), Expect = 4.826e-91 Identity = 190/467 (40.69%), Postives = 270/467 (57.82%), Query Frame = 1 Query: 886 HRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKD 2277 +NFY+EHP V+ + E E++ K T +D P P+ F E+ F ++ I KQ F +P+PIQ WP+ ++G+D++GIAQTG+GKTLA+LLPA +HI+ QP E GP L+L+PTRELA Q+Q +Y + S YGGA K QI L+ EI + TPGR+ D + NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K+ VQ+N+G L L+A H + Q V+ + +K +L+ +L I + E+K IIFV K +C +L + R G A IHGD QQER+ L R G I+IATDVASRGLD+ D+ VINYD+P + E+Y+HR+GRT R+ +TG A+TF N+M A +LI +L++A+Q + L Q+ +D Sbjct: 61 QKNFYQEHPDVTHRSPQEIEQYRRSKEV-------------------TVKGRD-------------CPKPMIKFNEASFPS-YVMDMIVKQNFTDPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPF-LEHGDGPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECNKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCDELTRRM---RRDGW-------PAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAGDLISVLREANQAINPKLIQMAED 483 HSP 2 Score: 136.346 bits (342), Expect = 4.843e-51 Identity = 82/221 (37.10%), Postives = 117/221 (52.94%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKP-RQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY+EHPD+ + S +E+E + R + +K DC KP+ F E + ++D+I NF PTPIQ GWPV L G+D +GIAQTG+GKTL ++LPA++HI Q +P ++ GP L+L+PTRELA Q++ + + +KS C YGGA K QI L EI + TPGR+ D + NL+ Sbjct: 60 FQKNFYQEHPDVTHRSPQEIEQY-RRSKEVTVK---------GRDC---------------------PKPMIKFNEASFPS-YVMDMIVKQNFTDPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHI--QHQPFLEHGDGPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECNKTNLR 246 HSP 3 Score: 87.4261 bits (215), Expect = 4.843e-51 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ + VQ+N+G+L L S HN L Sbjct: 247 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVQINIGALQL------SANHNIL 320
BLAST of ATP-dependent RNA helicase vs. Ensembl Medaka
Match: ENSORLT00000031911.1 (probable ATP-dependent RNA helicase DDX17 [Source:NCBI gene;Acc:101171584]) HSP 1 Score: 307.375 bits (786), Expect = 5.693e-90 Identity = 175/399 (43.86%), Postives = 251/399 (62.91%), Query Frame = 1 Query: 1087 PNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMK 2274 P P+ +F ++ F ++ + +Q F+EP+ IQ +P+ ++GRD++GIAQTG+GKTLA+LLPA +HI QP ++ GP L+L+PTRELA Q+Q Y I S YGGA K QI L+ EI + TPGR+ D +SG NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A +K VQ+N+G L+L+A H + Q V+ +K Q+L++++ I + E+K IIFV K +C DL + R G A IHGD Q ER+ L RSG ++IATDVASRGLD+ D+ VINYD+P + E+Y+HR+GRT R+ G A+TF ++ A EL+R+L++A Q + L QL++ Sbjct: 89 PKPLTSFHQAQFPQ-YVIDVLMQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY-LDRGDGPICLVLAPTRELAQQVQQVACDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINIGALELSANHNILQIVDVCTESEKDQKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRRM---RRDGW-------PAMCIHGDKSQPERDWVLSEFRSGKAPVLIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTNKGTAYTFFTPGNVRQARELVRVLEEARQAINPKLLQLVE 475 HSP 2 Score: 131.339 bits (329), Expect = 1.329e-49 Identity = 83/222 (37.39%), Postives = 115/222 (51.80%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPE-ILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY EH ++ +S +VE F RK I ++ G KP+ SF + + P+ ++D++ NF+ PT IQ G+P+ L GRD +GIAQTG+GKTL ++LPA++HI Q P R GP L+L+PTRELA Q++ K IKS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 53 FEKNFYSEHAEVERMSQFDVEEFR-RKKEITVR------------------------------GSGCPKPLTSFHQA--QFPQYVIDVLMQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ--PYLDRGDGPICLVLAPTRELAQQVQQVACDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLR 239 HSP 3 Score: 87.4261 bits (215), Expect = 1.329e-49 Identity = 42/80 (52.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ VQ+N+G+L+L S HN L Sbjct: 240 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVQINIGALEL------SANHNIL 313
BLAST of ATP-dependent RNA helicase vs. Ensembl Medaka
Match: si:dkey-156n14.5 (probable ATP-dependent RNA helicase DDX17 [Source:NCBI gene;Acc:101158507]) HSP 1 Score: 303.908 bits (777), Expect = 1.448e-88 Identity = 173/398 (43.47%), Postives = 250/398 (62.81%), Query Frame = 1 Query: 1087 PNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHD-IDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHI--KPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLM 2271 P PV F ++ F ++ + +Q F+EP+ IQ +P+ ++G+D++GIAQTG+GKTLA+LLPA +HI QP E+ GP L+L+PTRELA Q+Q Y I S YGGA K QI L+ EI + TPGR+ D ++G NL+ +YLVLDEADRMLDMGFE Q+ ++ +R RQT+M SATWP V+++A ++ +Q+N+G L+L+A H + Q V+ ++K +L++++ I + E+K IIFV K +C DL ++ R G A IHGD Q ER+ L RSG I+IATDVASRGLD+ D+ VINYD+P + E+YVHR+GRT R+ G A+TF ++ A +L+R+L++A Q + L QL+ Sbjct: 92 PKPVTAFHQAHFPQ-YVMDVLMQQNFKEPTAIQSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPY-LERGDGPICLVLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLREYIQINIGALELSANHNILQIVDVCMENEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTRKM---RRDGW-------PAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLV 477 HSP 2 Score: 135.191 bits (339), Expect = 1.930e-50 Identity = 84/221 (38.01%), Postives = 116/221 (52.49%), Query Frame = 2 Query: 2765 IHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRY-GPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLK 3421 +NFY EHP+++++S EVE F RK I I+ G KP+ +F + + ++D++ NF+ PT IQ G+PV L G+D +GIAQTG+GKTL ++LPA++HI Q P R GP L+L+PTRELA Q++ K IKS C YGGA K QI L EI + TPGR+ D + G NL+ Sbjct: 56 FEKNFYIEHPEVQHVSQFEVEEFR-RKKEITIR------------------------------GSGCPKPVTAFHQAHFPQ-YVMDVLMQQNFKEPTAIQSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQ--PYLERGDGPICLVLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR 242 HSP 3 Score: 86.6557 bits (213), Expect = 1.930e-50 Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIVSLYSSLYHNFL 3711 + +YLVLDEADRMLDMGFEPQ+ I++ R RQ++M SATWP+ VRQ+A ++ +Q+N+G+L+L S HN L Sbjct: 243 RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLREYIQINIGALEL------SANHNIL 316
BLAST of ATP-dependent RNA helicase vs. Planmine SMEST
Match: SMESG000011907.1 (SMESG000011907.1) HSP 1 Score: 1505.73 bits (3897), Expect = 0.000e+0 Identity = 894/895 (99.89%), Postives = 894/895 (99.89%), Query Frame = 1 Query: 37 MNDERTTIYVPSRHLGLIIGKGGSRIKELSEECGCRINIKKDQAVNDEVPVYLEGSSRNIEKAKSKIDEITRRQHKRHMNDNDSHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWKRKSPNDDRNERSYDKDKYNSSRTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDHDNDYSHGSSKQXXXXXXXXXXXXXXXXXXXXXXXXXXADMDALIFSGEELMKSNLKSNFVPSESYVQDDDWGIPTYLEEEKPIRKRPDNANIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYRINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRNGSNFNRRNKFDDTDDVQTDSSWPDFTNRSLSINSKLSKCYIQDEASDNEYWGNWNQEVITEKEAQPDIVMLSPNKVEQQQQPNIKISTQHCIKPFILANKDRSEY 2721 MNDERTTIYVPSRHLGLIIGKGGSRIKELSEECGCRINIKKDQAVNDEVPVYLEGSSRNIEKAKSKIDEITRRQHKRHMNDNDSHYNESDNDKSFSNSNYSNKRSSKYNDDDDYDNSSSWKRKSPNDDRNERSYDKDKYNSSRTDDSSWRNGNSRNNNSYNDNNNDYNSNSRSSYKDHDNDYSHGSSKQRANNVSRNNVANGDDWGGWGKKNDDNADMDALIFSGEELMKSNLKSNFVPSESYVQDDDWGIPTYLEEEKPIRKRPDNANIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDKNNIIIKEIESETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHRVGRTGRAGRTGEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYRINGGGRGGRFGGRGGGRGRGGGGGGFGGGDRDRGGQRNGSNFNRRNKFDDTDDVQTDSSWPDFTNRSLSINSKLSKCYIQDEASDNEYWGNWNQEVITEKEAQPDIVMLSPNKVEQQQQPNIKISTQHCIKPFILANKDRS Y Sbjct: 1 MNDERTTIYVPSRHLGLIIGKGGSRIKELSEECGCRINIKKDQAVNDEVPVYLEGSSRNIEKAKSKIDEITRRQHKRHMNDNDSHYNESDNDKSFSNSNYSNKRSSKYNDDDDYDNSSSWKRKSPNDDRNERSYDKDKYNSSRTDDSSWRNGNSRNNNSYNDNNNDYNSNSRSSYKDHDNDYSHGSSKQRANNVSRNNVANGDDWGGWGKKNDDNADMDALIFSGEELMKSNLKSNFVPSESYVQDDDWGIPTYLEEEKPIRKRPDNANIKMKCTKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDKNNIIIKEIESETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHRVGRTGRAGRTGEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMKDHQDYRINGGGRGGRFGGRGGGRGRGGGGGGFGGGDRDRGGQRNGSNFNRRNKFDDTDDVQTDSSWPDFTNRSLSINSKLSKCYIQDEASDNEYWGNWNQEVITEKEAQPDIVMLSPNKVEQQQQPNIKISTQHCIKPFILANKDRSIY 895 HSP 2 Score: 477.248 bits (1227), Expect = 2.581e-169 Identity = 229/242 (94.63%), Postives = 231/242 (95.45%), Query Frame = 2 Query: 2702 IKTEVSI*GFSVVYTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDV 3427 I T+ I F + D IYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDV Sbjct: 876 ISTQHCIKPFILANKDRSIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDV 1117 HSP 3 Score: 140.198 bits (352), Expect = 2.581e-169 Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 1 Query: 3475 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIV 3678 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLI Sbjct: 1117 VSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIA 1184 HSP 4 Score: 494.197 bits (1271), Expect = 2.224e-148 Identity = 260/468 (55.56%), Postives = 334/468 (71.37%), Query Frame = 1 Query: 862 KDSNFYPVHRNFYREHPSVSKMTIDEKEKFLL---DXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDF 2256 KD + YP+HRNFY EHP + ++++E E FLL + +K ++ E C+ + FD+D E++ P I P+R+FEE F+ HP+IL I+ F+ P+PIQCI WP+++ GRD IGIAQTGTGKTL F+LPA IHIEGQ KPR+ R GPTVLILSPTRELA+QI++E+ K YH+I SV CYGGA+K QI L++NPEIVVGTPGRI DL G LNLKDVSYLVLDEADRMLDMGFE QVV++I R+QRQ++MTSATWP V++IAL +M NPVQVNVG+LDL AC+ V Q +++V DKT L+ I+ + DK+I+FV RK QC L L L P ++ CEIHGDL Q++RE +L R G +I+IAT+VASRGLDI D+T V+NYDFPK+IEEYVHRVGRTGRAG+ G++ TFMN+ D ++ EL IL ++Q P + Sbjct: 890 KDRSIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDED-CDQHNDDFDEDQVEVLPGTP---GIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDLIACNDVVQEIKFVTNFDKTNELINIICDMNETDKVIVFVTRKVQCRSLTKYLDKLIRSNQLSPFASI--CEIHGDLSQEDREQSLSWFRDGHCSILIATNVASRGLDIADITCVVNYDFPKDIEEYVHRVGRTGRAGKAGKSITFMNEADWKHSFELRNILIQSNQNAPSW 1351 HSP 5 Score: 269.24 bits (687), Expect = 3.779e-95 Identity = 132/230 (57.39%), Postives = 168/230 (73.04%), Query Frame = 2 Query: 2747 DLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTP---GIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNLKDV 3427 D YP+HRNFY EHP + ++++E E FLL KNNI+IKE+++ + C+ + FD+D E++ P I P+R+FEE F+ HP+IL I+ F+ P+PIQCI WP+++ GRD IGIAQTGTGKTL F+LPA IHIEGQ KPR+ R GPTVLILSPTRELA+QI++E+ K YH+I SV CYGGA+K QI L++NPEIVVGTPGRI DL G LNLKDV Sbjct: 277 DSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDKNNIIIKEIESETGE--SFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDV 504 HSP 6 Score: 101.293 bits (251), Expect = 3.779e-95 Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 1 Query: 3457 LLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 +L + VSYLVLDEADRMLDMGFE QVV++I R+QRQ++MTSATWP V++IAL +M NPVQVNVG+LDL Sbjct: 498 VLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDL 569
BLAST of ATP-dependent RNA helicase vs. Planmine SMEST
Match: SMESG000005969.1 (SMESG000005969.1) HSP 1 Score: 340.117 bits (871), Expect = 7.612e-102 Identity = 199/465 (42.80%), Postives = 281/465 (60.43%), Query Frame = 1 Query: 880 PVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYHDIDSVVC-YGGADKRDQIYQL-KENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 P +NFY EHP V+ + E ++F ++ +E+ + K +P P+ NF E F + ILT I K K+ P+PIQC WP+ M+GR+++GIAQTG+GKT AFLLPA IHI QP P GP L+L PTRELA Q+++ V+++ ++VC YGG+D+++QI L + PEI+V TPGR+ DL NL+ +YLVLDEADRMLDMGFE Q+ ++ VR RQ ++ SATWP V+R+A + +QVN+G + L+A H + Q+VE +D K +RL+E+L K ++FVA K +C ++ ++ RS KA +HGD Q+ERE AL+ R+G NIM+ATDVASRGLDI D+ VINYDFP IE+YVHR+GRT R + G ++TF N+ +A +L+ IL++A Q + D L L Sbjct: 42 PFKKNFYIEHPIVTARSSYEIDRF-----------------------------RNEKEMT---VVGKNVPRPIFNFSEMNFPN-FILTTILKNKWVRPTPIQCQGWPMAMSGRNVVGIAQTGSGKTAAFLLPALIHIRAQP-PLVAGDGPICLVLVPTRELAQQVESVVEEFGISGGFNMVCVYGGSDRQNQIKNLHTKRPEILVATPGRLLDLLKQNETNLRRTTYLVLDEADRMLDMGFEPQIRAVLNQVRPDRQMLLWSATWPLEVRRLAEDFLNEYIQVNIGAMSLHANHNICQYVEVIDEFGKERRLIELLKQFNGL-KTLVFVALKKRCDRMS-DMLNSRS---------FKALAMHGDKPQRERERALENFRNGRSNIMVATDVASRGLDIDDIMLVINYDFPTQIEDYVHRIGRTARQEKKGTSYTFFTNNEKKHAQKLVSILEEATQNISDKLYDL 461 HSP 2 Score: 128.642 bits (322), Expect = 8.114e-47 Identity = 81/224 (36.16%), Postives = 115/224 (51.34%), Query Frame = 2 Query: 2756 IYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYH-NIKSVCCYGGAEKMYQINSLR-DNPEIVVGTPGRINDLVLMGCLNLK 3421 + P +NFY EHP + S E++ F ++ E+ + +PI +F EM + + + I+K + PTPIQC GWP+ + GR+ +GIAQTG+GKT F+LPALIHI Q P GP L+L PTRELA Q+ES + + VC YGG+++ QI +L PEI+V TPGR+ DL+ NL+ Sbjct: 40 LMPFKKNFYIEHPIVTARSSYEIDRF-------------------------------RNEKEMTVVGKNVPRPIFNFSEMNFPNFILTTILKN-KWVRPTPIQCQGWPMAMSGRNVVGIAQTGSGKTAAFLLPALIHIRAQ-PPLVAGDGPICLVLVPTRELAQQVESVVEEFGISGGFNMVCVYGGSDRQNQIKNLHTKRPEILVATPGRLLDLLKQNETNLR 230 HSP 3 Score: 80.4925 bits (197), Expect = 8.114e-47 Identity = 35/67 (52.24%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 + +YLVLDEADRMLDMGFEPQ+ +++N R RQ ++ SATWP VR++A +++ +QVN+G++ L Sbjct: 231 RTTYLVLDEADRMLDMGFEPQIRAVLNQVRPDRQMLLWSATWPLEVRRLAEDFLNEYIQVNIGAMSL 297
BLAST of ATP-dependent RNA helicase vs. Planmine SMEST
Match: SMESG000033908.1 (SMESG000033908.1) HSP 1 Score: 315.079 bits (806), Expect = 2.041e-93 Identity = 186/467 (39.83%), Postives = 274/467 (58.67%), Query Frame = 1 Query: 871 NFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYH-DIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 N P +NFYRE+P VS + E E ++ T D I P+ +F E +I++ IR K+ EP+PIQ P+ ++GR+L+G+A+TG+GKT ++L+PA +H++ QP P + GP LI+ PTRELA Q+Q + I SV YGGA+K DQI QL+ EI+V TPGR+ DL S + NL +Y+VLDEADRMLDMGFE Q+ + VR+ RQT+M SATWP VQR+A + +QVN+G+ +L+A ++Q VE +D + K +RL+E+++ P DK+I+F K + + FL+ + +G +HGD Q +RE L R NI++ATDVASRGLD+ D+ VINYDFP E+Y+HR+GRTGR G++G ++TF N+ + +A +L++++++A+Q V D L L Sbjct: 95 NLIPFEKNFYRENPVVSNRSSSEIE--------------------NYRRLKEMTVKGDN------------INKPIFSFNEIDLSR-EIMSVIRNNKWNEPTPIQAQGLPMALSGRNLVGVARTGSGKTASYLIPAIVHLKAQP-PLRRGDGPICLIVVPTRELAQQVQTVANDFCESVGIRSVCVYGGANKGDQIRQLRSGAEIIVATPGRLIDLLKSSITNLHRTTYVVLDEADRMLDMGFEPQIRKIFSQVRQDRQTLMWSATWPKEVQRLAQDFLGKYIQVNIGSQELHANPNIEQIVEILDEYSKDKRLLEVVSKT-PRDKMIVFAETKKKADMIC--SFLRSKQFRVGA--------MHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 516 HSP 2 Score: 135.191 bits (339), Expect = 1.079e-48 Identity = 82/230 (35.65%), Postives = 121/230 (52.61%), Query Frame = 2 Query: 2732 SVVYTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNL 3418 SV + + P +NFY E+P + N S E+E++ + LK + D I KPI SF E+ EI+ +I+ + PTPIQ G P+ L GR+ +G+A+TG+GKT ++++PA++H++ Q P + GP LI+ PTRELA Q+++ + I+SVC YGGA K QI LR EI+V TPGR+ DL+ NL Sbjct: 88 SVDWNSQNLIPFEKNFYRENPVVSNRSSSEIENY---------RRLKEMTVKGD----------------------NINKPIFSFNEIDLSR-EIMSVIRNNKWNEPTPIQAQGLPMALSGRNLVGVARTGSGKTASYLIPAIVHLKAQ-PPLRRGDGPICLIVVPTRELAQQVQTVANDFCESVGIRSVCVYGGANKGDQIRQLRSGAEIIVATPGRLIDLLKSSITNL 284 HSP 3 Score: 80.1073 bits (196), Expect = 1.079e-48 Identity = 35/67 (52.24%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 + +Y+VLDEADRMLDMGFEPQ+ I + R+ RQ++M SATWP+ V+++A ++ +QVN+GS +L Sbjct: 286 RTTYVVLDEADRMLDMGFEPQIRKIFSQVRQDRQTLMWSATWPKEVQRLAQDFLGKYIQVNIGSQEL 352
BLAST of ATP-dependent RNA helicase vs. Planmine SMEST
Match: SMESG000033916.1 (SMESG000033916.1) HSP 1 Score: 314.309 bits (804), Expect = 2.946e-93 Identity = 186/467 (39.83%), Postives = 274/467 (58.67%), Query Frame = 1 Query: 871 NFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYH-DIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIPDLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQL 2268 N P +NFYRE+P VS + E E ++ T D I P+ +F E +I++ IR K+ EP+PIQ P+ ++GR+L+G+A+TG+GKT ++L+PA +H++ QP P + GP LI+ PTRELA Q+Q + I SV YGGA+K DQI QL+ EI+V TPGR+ DL S + NL +Y+VLDEADRMLDMGFE Q+ + VR+ RQT+M SATWP VQR+A + +QVN+G+ +L+A ++Q VE +D + K +RL+E+++ P DK+I+F K + + FL+ + +G +HGD Q +RE L R NI++ATDVASRGLD+ D+ VINYDFP E+Y+HR+GRTGR G++G ++TF N+ + +A +L++++++A+Q V D L L Sbjct: 89 NLIPFEKNFYRENPVVSNRSSSEIE--------------------NYRRLKEMTVKGDN------------INKPIFSFNEIDLSR-EIMSVIRNNKWNEPTPIQAQGLPMALSGRNLVGVARTGSGKTASYLIPAIVHLKAQP-PLRRGDGPICLIVVPTRELAQQVQTVANDFCESVGIRSVCVYGGANKGDQIRQLRNGAEIIVATPGRLIDLLKSSITNLHRTTYVVLDEADRMLDMGFEPQIRKIFSQVRQDRQTLMWSATWPKEVQRLAQDFLGKYIQVNIGSQELHANPNIEQIVEILDEYSKDKRLLEVVSKT-PRDKMIVFAETKKKADMICS--FLRSKQFRVG--------AMHGDKSQSDREYILNGFRGENLNILVATDVASRGLDVDDIKVVINYDFPIQFEDYIHRIGRTGRRGKSGVSYTFFNRKNSKSARQLVKVMEEANQSVSDSLYDL 510 HSP 2 Score: 136.346 bits (342), Expect = 5.384e-49 Identity = 82/230 (35.65%), Postives = 122/230 (53.04%), Query Frame = 2 Query: 2732 SVVYTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKI-KYHNIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNL 3418 SV + + P +NFY E+P + N S E+E++ + LK + D I KPI SF E+ EI+ +I+ + PTPIQ G P+ L GR+ +G+A+TG+GKT ++++PA++H++ Q P + GP LI+ PTRELA Q+++ + I+SVC YGGA K QI LR+ EI+V TPGR+ DL+ NL Sbjct: 82 SVDWNSQNLIPFEKNFYRENPVVSNRSSSEIENY---------RRLKEMTVKGD----------------------NINKPIFSFNEIDLSR-EIMSVIRNNKWNEPTPIQAQGLPMALSGRNLVGVARTGSGKTASYLIPAIVHLKAQ-PPLRRGDGPICLIVVPTRELAQQVQTVANDFCESVGIRSVCVYGGANKGDQIRQLRNGAEIIVATPGRLIDLLKSSITNL 278 HSP 3 Score: 80.1073 bits (196), Expect = 5.384e-49 Identity = 35/67 (52.24%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 + +Y+VLDEADRMLDMGFEPQ+ I + R+ RQ++M SATWP+ V+++A ++ +QVN+GS +L Sbjct: 280 RTTYVVLDEADRMLDMGFEPQIRKIFSQVRQDRQTLMWSATWPKEVQRLAQDFLGKYIQVNIGSQEL 346
BLAST of ATP-dependent RNA helicase vs. Planmine SMEST
Match: SMESG000033348.1 (SMESG000033348.1) HSP 1 Score: 315.849 bits (808), Expect = 3.197e-93 Identity = 192/501 (38.32%), Postives = 283/501 (56.49%), Query Frame = 1 Query: 859 TKDSNFYPVHRNFYREHPSVSKMTIDEKEKFLLDXXXXXXXXXXSETGESFCNFGSTTFDKDPEELIDEIPIPKVIPNPVRNFEESFFDHPDILTEIRKQKFQEPSPIQCIAWPILMTGRDLIGIAQTGTGKTLAFLLPAFIHIEGQPKPREKRQGPTVLILSPTRELAIQIQNEVQKYTYH-DIDSVVCYGGADKRDQIYQLKENPEIVVGTPGRIQDLKDSGVLNLKDVSYLVLDEADRMLDMGFEIQVVNLIYAVRRQRQTVMTSATWPFGVQRIALTHMKNPVQVNVGTLDLNACHTVKQHVEYVDYHDKTQRLVEILAHIKPEDKIIIFVARKAQCSDLAFELFLKRSKGLLGPKGAVKACEIHGDLDQQEREMALKMMRSGARNIMIATDVASRGLDIP-------------------DLTKVINYDFPKNIEEYVHXXXXXXXXXXXXEAFTFMNKNDMSNAAELIRILQDADQEVPDFLPQLMK-DHQDYRIN 2298 + D NF P +NFY+E+ VS + E E + E N F DEI + + +I++ IR K+ EP+PIQ P+ ++GR+L+G+A+TG+GKT ++L+PA +H++ QP P + GP LI+ PTRELA Q+Q ++ I SV YGGA+K DQI QL+ EI+V TPGR+ DL S + NL +Y+VLDEADRMLDMGFE Q+ + VR+ RQT+M SATWP VQR+A + +QVN+G+ +L+A ++Q VE +D H K +RL+EI++ P DK+I+F K + + + FL+ + +G +HGD Q +R+ LK R NI++ATDVASRGL IP D+ VINYDFP E+Y+HR+GRTGR +TG ++TF N+N+ +AA L+++++ ++Q VP+ L + + DY +N Sbjct: 131 SNDQNFIPFQKNFYQENRVVSNRSSSEIENY----------RRLKEMTVKGDNINKPIFS------FDEIDLSR-----------------EIMSVIRNNKWNEPTPIQAQGLPMALSGRNLVGVARTGSGKTASYLIPAIVHLKAQP-PLRRGDGPICLIVVPTRELAQQVQTVANDFSQSVGIRSVCVYGGANKGDQIRQLRYGAEIIVATPGRLIDLLQSSITNLHRTTYVVLDEADRMLDMGFEPQIRKIFSQVRQDRQTLMWSATWPKEVQRLAQDFLGKYIQVNIGSQELHANPNIEQIVEIIDEHAKDKRLLEIVSK-NPNDKMIVFAETKKKADIICY--FLRSKQFRVGA--------MHGDKSQSDRDYILKGFRGQHLNILVATDVASRGLVIPNYKWVINLNLLAYRYSNIDDIKIVINYDFPNQFEDYIHRIGRTGRKDKTGLSYTFFNENNSRSAASLVKVMEKSNQIVPEALYNFIHYKNNDYAVN 586 HSP 2 Score: 132.494 bits (332), Expect = 2.272e-48 Identity = 81/229 (35.37%), Postives = 119/229 (51.97%), Query Frame = 2 Query: 2735 VVYTDLGIYPIHRNFYEEHPDIRNLSLEEVESFLLRKNNIMIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKHPEILDIIKALNFETPTPIQCIGWPVILGGRDFIGIAQTGTGKTLTFVLPALIHIEGQMKPRQYRYGPTVLILSPTRELAMQIESEILKIKYH-NIKSVCCYGGAEKMYQINSLRDNPEIVVGTPGRINDLVLMGCLNL 3418 V D P +NFY+E+ + N S E+E++ + LK + D I KPI SF+E+ EI+ +I+ + PTPIQ G P+ L GR+ +G+A+TG+GKT ++++PA++H++ Q P + GP LI+ PTRELA Q+++ I+SVC YGGA K QI LR EI+V TPGR+ DL+ NL Sbjct: 129 VNSNDQNFIPFQKNFYQENRVVSNRSSSEIENY---------RRLKEMTVKGD----------------------NINKPIFSFDEIDLSR-EIMSVIRNNKWNEPTPIQAQGLPMALSGRNLVGVARTGSGKTASYLIPAIVHLKAQ-PPLRRGDGPICLIVVPTRELAQQVQTVANDFSQSVGIRSVCVYGGANKGDQIRQLRYGAEIIVATPGRLIDLLQSSITNL 324 HSP 3 Score: 81.6481 bits (200), Expect = 2.272e-48 Identity = 35/67 (52.24%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 3472 KVSYLVLDEADRMLDMGFEPQVVSIINDTRKQRQSIMTSATWPECVRQIALLYMDNPVQVNVGSLDL 3672 + +Y+VLDEADRMLDMGFEPQ+ I + R+ RQ++M SATWP+ V+++A ++ +QVN+GS +L Sbjct: 326 RTTYVVLDEADRMLDMGFEPQIRKIFSQVRQDRQTLMWSATWPKEVQRLAQDFLGKYIQVNIGSQEL 392 The following BLAST results are available for this feature:
BLAST of ATP-dependent RNA helicase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of ATP-dependent RNA helicase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30030038 ID=SMED30030038|Name=ATP-dependent RNA helicase|organism=Schmidtea mediterranea sexual|type=transcript|length=4761bpback to top protein sequence of SMED30030038-orf-1 >SMED30030038-orf-1 ID=SMED30030038-orf-1|Name=SMED30030038-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=108bp MLEFKRRNTVVIRYEVDLLIIIKVSYLVLDEADRMLDMGFEPQVVSIINDback to top protein sequence of SMED30030038-orf-2 >SMED30030038-orf-2 ID=SMED30030038-orf-2|Name=SMED30030038-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=913bp MNDERTTIYVPSRHLGLIIGKGGSRIKELSEECGCRINIKKDQAVNDEVPback to top protein sequence of SMED30030038-orf-3 >SMED30030038-orf-3 ID=SMED30030038-orf-3|Name=SMED30030038-orf-3|organism=Schmidtea mediterranea sexual|type=polypeptide|length=194bp MIKELKTFPTQLDEDCDQHNDDFDEDQVEVLPGTPGIAKPIRSFEEMFWKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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