UBX domain-containing protein 11-like

Overview
NameUBX domain-containing protein 11-like
Smed IDSMED30029809
Length (bp)1652
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of UBX domain-containing protein 11-like (SMED30029809) t-SNE clustered cells

Violin plots show distribution of expression levels for UBX domain-containing protein 11-like (SMED30029809) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of UBX domain-containing protein 11-like (SMED30029809) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for UBX domain-containing protein 11-like (SMED30029809) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30029809

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 7

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30029809h1SMcG0003927 SmedASXL_014223SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
pharynxSMED30029809h1SMcG0003927 dd_Smed_v4_14940_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30029809h1SMcG0003927 dd_Smed_v6_14940_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
reproductive organSMED30029809h1SMcG0003927 Contig40620uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30029809h1SMcG0003927 Contig40620newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
prepharyngeal regionSMED30029809h1SMcG0003927 PL08006A1F04smed_ncbi_20240424PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
parapharyngeal regionSMED30029809h1SMcG0003927 PL08006A1F04smed_ncbi_20240424PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite colorimetric in situ hybridization evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Human
Match: UBXN11 (UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC:30600])

HSP 1 Score: 180.259 bits (456), Expect = 7.820e-50
Identity = 124/424 (29.25%), Postives = 216/424 (50.94%), Query Frame = 3 
Query:  312 PLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTK-QINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGE------SNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILEN--TLPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTP 1556
            P S D EL++ + +++  LE   + Q  EI  K  +I  LED   L Q  +    +   +R  +LE  C +LQ+Q+ EME FLSDYGL WVGE      S    + E GE + W   +      D   PP+   VD+D+++ ++++L+ L+   ++ +T   P    L+  + +PL LY NGI +F GPF+ F D ST+  ++DI+DG+FPSEL+  YP+GVP  + D RN  +    ++ F G G+ +G Q     L                  + + +   +++T  +FLN+LP   I + G ++ IR  I+D L+N   LP+   E +  T   + + + +          ++ ++I+S +G + + + M+    + ++  +L+    +    F + S++PP     + +L+L+  GL P
Sbjct:   35 PASHDSELMAFMTRKLWDLEQQVKAQTDEILSKDQKIAALED---LVQTLRPHPAEATLQRQEELETMCVQLQRQVREMERFLSDYGLQWVGEPMDQEDSESKTVSEHGERD-WMTAKKFWKPGDSLAPPE---VDFDRLLASLQDLSELVVEGDTQVTPV-PGGARLRTLEPIPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGEGRVVGRQLMHKAL------------------DRVEEHPGSRMTAEKFLNRLPKFVI-RQGEVIDIRGPIRDTLQNCCPLPARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVRALLAQARVMDASAFEIFSTFPPT-LYQDDTLTLQAAGLVP 430
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Human
Match: UBXN11 (UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC:30600])

HSP 1 Score: 180.259 bits (456), Expect = 7.820e-50
Identity = 124/424 (29.25%), Postives = 216/424 (50.94%), Query Frame = 3 
Query:  312 PLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTK-QINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGE------SNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILEN--TLPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTP 1556
            P S D EL++ + +++  LE   + Q  EI  K  +I  LED   L Q  +    +   +R  +LE  C +LQ+Q+ EME FLSDYGL WVGE      S    + E GE + W   +      D   PP+   VD+D+++ ++++L+ L+   ++ +T   P    L+  + +PL LY NGI +F GPF+ F D ST+  ++DI+DG+FPSEL+  YP+GVP  + D RN  +    ++ F G G+ +G Q     L                  + + +   +++T  +FLN+LP   I + G ++ IR  I+D L+N   LP+   E +  T   + + + +          ++ ++I+S +G + + + M+    + ++  +L+    +    F + S++PP     + +L+L+  GL P
Sbjct:   35 PASHDSELMAFMTRKLWDLEQQVKAQTDEILSKDQKIAALED---LVQTLRPHPAEATLQRQEELETMCVQLQRQVREMERFLSDYGLQWVGEPMDQEDSESKTVSEHGERD-WMTAKKFWKPGDSLAPPE---VDFDRLLASLQDLSELVVEGDTQVTPV-PGGARLRTLEPIPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGEGRVVGRQLMHKAL------------------DRVEEHPGSRMTAEKFLNRLPKFVI-RQGEVIDIRGPIRDTLQNCCPLPARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVRALLAQARVMDASAFEIFSTFPPT-LYQDDTLTLQAAGLVP 430
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Human
Match: UBXN11 (UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC:30600])

HSP 1 Score: 180.259 bits (456), Expect = 1.529e-49
Identity = 124/424 (29.25%), Postives = 216/424 (50.94%), Query Frame = 3 
Query:  312 PLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTK-QINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGE------SNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENT--LPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTP 1556
            P S D EL++ + +++  LE   + Q  EI  K  +I  LED   L Q  +    +   +R  +LE  C +LQ+Q+ EME FLSDYGL WVGE      S    + E GE + W   +      D   PP+   VD+D+++ ++++L+ L+   ++ +T   P    L+  + +PL LY NGI +F GPF+ F D ST+  ++DI+DG+FPSEL+  YP+GVP  + D RN  +    ++ F G G+ +G Q     L                  + + +   +++T  +FLN+LP   I + G ++ IR  I+D L+N   LP+   E +  T   + + + +          ++ ++I+S +G + + + M+    + ++  +L+    +    F + S++PP     + +L+L+  GL P
Sbjct:   68 PASHDSELMAFMTRKLWDLEQQVKAQTDEILSKDQKIAALED---LVQTLRPHPAEATLQRQEELETMCVQLQRQVREMERFLSDYGLQWVGEPMDQEDSESKTVSEHGERD-WMTAKKFWKPGDSLAPPE---VDFDRLLASLQDLSELVVEGDTQVTPV-PGGARLRTLEPIPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGEGRVVGRQLMHKAL------------------DRVEEHPGSRMTAEKFLNRLPKFVI-RQGEVIDIRGPIRDTLQNCCPLPARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVRALLAQARVMDASAFEIFSTFPPTL-YQDDTLTLQAAGLVP 463
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Human
Match: UBXN11 (UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC:30600])

HSP 1 Score: 180.259 bits (456), Expect = 1.529e-49
Identity = 124/424 (29.25%), Postives = 216/424 (50.94%), Query Frame = 3 
Query:  312 PLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTK-QINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGE------SNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENT--LPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTP 1556
            P S D EL++ + +++  LE   + Q  EI  K  +I  LED   L Q  +    +   +R  +LE  C +LQ+Q+ EME FLSDYGL WVGE      S    + E GE + W   +      D   PP+   VD+D+++ ++++L+ L+   ++ +T   P    L+  + +PL LY NGI +F GPF+ F D ST+  ++DI+DG+FPSEL+  YP+GVP  + D RN  +    ++ F G G+ +G Q     L                  + + +   +++T  +FLN+LP   I + G ++ IR  I+D L+N   LP+   E +  T   + + + +          ++ ++I+S +G + + + M+    + ++  +L+    +    F + S++PP     + +L+L+  GL P
Sbjct:   68 PASHDSELMAFMTRKLWDLEQQVKAQTDEILSKDQKIAALED---LVQTLRPHPAEATLQRQEELETMCVQLQRQVREMERFLSDYGLQWVGEPMDQEDSESKTVSEHGERD-WMTAKKFWKPGDSLAPPE---VDFDRLLASLQDLSELVVEGDTQVTPV-PGGARLRTLEPIPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGEGRVVGRQLMHKAL------------------DRVEEHPGSRMTAEKFLNRLPKFVI-RQGEVIDIRGPIRDTLQNCCPLPARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVRALLAQARVMDASAFEIFSTFPPTL-YQDDTLTLQAAGLVP 463
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Human
Match: UBXN11 (UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC:30600])

HSP 1 Score: 133.65 bits (335), Expect = 4.650e-35
Identity = 83/226 (36.73%), Postives = 128/226 (56.64%), Query Frame = 3 
Query:  312 PLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTK-QINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGE------SNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINL 968
            P S D EL++ + +++  LE   + Q  EI  K  +I  LED   L Q  +    +   +R  +LE  C +LQ+Q+ EME FLSDYGL WVGE      S    + E GE + W   +      D   PP+   VD+D+++ ++++L+ L+   ++ +T   P    L+  + +PL LY NGI +F GPF+ F D ST+  ++DI+DG+FPSEL+  YP+GVP  +
Sbjct:   30 PASHDSELMAFMTRKLWDLEQQVKAQTDEILSKDQKIAALED---LVQTLRPHPAEATLQRQEELETMCVQLQRQVREMERFLSDYGLQWVGEPMDQEDSESKTVSEHGERD-WMTAKKFWKPGDSLAPPE---VDFDRLLASLQDLSELVVEGDTQVTPV-PGGARLRTLEPIPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKV 247
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Zebrafish
Match: ubxn11 (UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125])

HSP 1 Score: 211.075 bits (536), Expect = 1.915e-61
Identity = 159/538 (29.55%), Postives = 274/538 (50.93%), Query Frame = 3 
Query:   18 MTNPLSSLN---RYP---------RRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDKEFNDLLDDVTSNMAKNNLKKYSKELMKSNLQPLTGSYTSRTDESVNFKPLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDT--NAERVRQLEYECERLQKQILEMEVFLSDYGLIWVG--ESNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINA-FQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENTLPSSNVETISSTKNASIQID-ETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMK 1577
            MT+PLS L    R P         R+P KE++ S   EKL            QD+ PQ  ++    + D +++  +K   KK +K  + S                        D+EL+S +M++I  LE   + Q  +I+ K  RI +LE+K  + +  K + ++  N  +   L   C +LQKQ+ EME FL+DYG+IWVG  E N             +DE   S          ++ +++D ++ N++ELN+     ES +T   P   +L +K  +PL LY NGI +F+GPFRS+ D +T+  +QD++DG+FPSEL++R+P+GVP  + DRR   F +++  A F G G+T+           DG + ++D+          S+ +  ++++ QFL KLP  ++ K G+++ IR+S+K  L      +   +    + +++Q   E  ND   S  +++ ++++S DG   + I M  T+ + +L Q L          + ++S++P  R+ ++ + +L  CGLTPNA+L ++
Sbjct:    1 MTSPLSILRKNRRAPLPDLHTDGERKPHKERSDSDYEEKL-----------FQDIFPQ--NQPVPRVPDHLSTLRSKFMQKKKAKAAVPS------------------------DFELMSSMMQKICHLERKVKTQAVDIEQKARRIAVLEEKLNILREAKVLEESASNENQDEGLVQFCLKLQKQVWEMENFLNDYGMIWVGGYEEN-------------QDERAESQLTGASSGRKRFEMNFDLVMQNVKELNLEAGEGESHVTAI-PGGAKLTQKPPIPLWLYKNGIVMFNGPFRSYQDPTTQECMQDLMDGFFPSELQERFPNGVPFQVNDRREEEFIVRRPRAEFPGRGQTI-----------DGGQQMMDSSEISSTIPKQSQIAGRKLSMEQFLRKLP-ETVVKAGKVISIRDSVKAHLLGLSDDAKSRSAIIVETSALQSSRECENDSSKSAKDVSTLRVKSEDGTDTFIIKMYFTETIGDLRQYLDVKRGPSAASYDIISAFPQ-RRYSDDTQTLLACGLTPNAALLLR 474
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Xenopus
Match: UBXN11 (UBX domain protein 11 [Source:NCBI gene;Acc:100493049])

HSP 1 Score: 232.261 bits (591), Expect = 6.799e-69
Identity = 143/424 (33.73%), Postives = 240/424 (56.60%), Query Frame = 3 
Query:  324 DYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLIT-MTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYF-DIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDIL----ENTLPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMK 1577
            D++L++  MKR+ +LE   R QE+EI+ K   I+ LE K K  Q     N T+  R ++LE++C+ L K+I EME FL DYGL+WVGE+N          ++  +    ++ P    P   ++ D+D ++ N+ +LN+L    ES I    G  R  L+  ++VPLTLY NGI +F GPFRS+ +KST++ I+DI+DGYFPSEL+ R+P+GV   + D RN+ F + ++ + F G G+T+G  S+ S L  +                   K    Q++  QFLN+LP  S+ + GRI+ +R+++++ L    EN +P   +      ++  +  +++T D++     ++ ++IRS  G+K YK+ M S++ L +L   LSS        + +++ +P C    + + +L++ GL PNA L ++
Sbjct:  133 DFDLLNSTMKRLGELERRVRAQEQEIQSKDQEIRDLEKKIKRLQQLHSGNATSGRREQELEHQCKELNKKISEMERFLGDYGLVWVGENNA---------DVSPESTARTWSPGPSSP-TSFLPDFDLVLENLRDLNVLGGEGESHIEYQKGGAR--LRAPESVPLTLYKNGIIMFQGPFRSYKEKSTQLCIRDIMDGYFPSELQARFPNGVTFQVTDNRNVIFQEQRRWDDFPGSGQTIG--SSGSNLQTN-------------------KKPGPQLSTDQFLNRLP-KSVIRGGRIVHVRSAVREALQGSEENEMPKEIL-----VESPQLSKEQSTQDNM----VVSTLRIRSESGDKTYKVRMLSSETLADLRNYLSSCRAPDLSSYNIITPFPYC-VYEDDTCTLEEVGLVPNAFLVLR 512
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Mouse
Match: Ubxn11 (UBX domain protein 11 [Source:MGI Symbol;Acc:MGI:1914836])

HSP 1 Score: 176.792 bits (447), Expect = 9.678e-49
Identity = 124/421 (29.45%), Postives = 223/421 (52.97%), Query Frame = 3 
Query:  321 EDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVE--SGEINLWKDEEVNSFDPDKEYPP-DKYI---VDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENT--LPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPN 1559
             D EL++ + +++ +LE   + Q  E+  K  +I  LED  +  Q  +  N+   +R  +LE +C +LQ+QI EME FLSDYGL WVGE    P+ +  S E  + +++E +     K + P D ++   VD+DK++ ++++L+ L++ E  +  + G  R   +  + +PL +Y NGI +F GPFR F D ST+  ++DI+DG+FPSEL+  YP GVP  + D RN  +    +  F G G+ +G Q                       T+ + + S +++T  QFLN+LP   I + G ++ IR  I+D L+N   +P+   E I  T   + +   +          ++ ++I+S +G + + + M     + ++ ++L+   ++    F ++S++PP     + +++L+  GL PN
Sbjct:   69 HDSELMASMTRKLQELEQQLQAQNDEMLSKERKILDLEDLVQTLQQHQ--NNAALQRQEELETQCIQLQRQIGEMERFLSDYGLQWVGE----PMDQENSEEKTVSENDERDWMKAKKFWKPGDSFVPPEVDFDKLMASLQDLSELVEGEAQVTPVPGGAR--FRTLEPIPLKVYRNGIMMFDGPFRPFYDPSTQRCLRDILDGFFPSELQRLYPDGVPFKVSDLRNQIYPEDGLGQFPGEGRVVGRQKMRK------------------VTDRVEETSGSRMTAEQFLNRLP-KCIIRQGEVIDIRGPIRDTLQNCCPMPARIQEIIVETPALASERQRSQESPDMPMPLLSMLRIKSENGEQAFLLMMWPEDTIGDVRKLLAQARDMDSAAFEILSTFPPT-VYQDDTVTLQAAGLVPN 461
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Mouse
Match: Ubxn11 (UBX domain protein 11 [Source:MGI Symbol;Acc:MGI:1914836])

HSP 1 Score: 134.806 bits (338), Expect = 1.777e-34
Identity = 84/301 (27.91%), Postives = 156/301 (51.83%), Query Frame = 3 
Query:  663 DKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENT--LPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPN 1559
            D   PP+   VD+DK++ ++++L+ L++ E  +  + G  R   +  + +PL +Y NGI +F GPFR F D ST+  ++DI+DG+FPSEL+  YP GVP  + D RN  +    +  F G G+ +G Q                       T+ + + S +++T  QFLN+LP   I + G ++ IR  I+D L+N   +P+   E I  T   + +   +          ++ ++I+S +G + + + M     + ++ ++L+   ++    F ++S++PP     + +++L+  GL PN
Sbjct:   68 DSFVPPE---VDFDKLMASLQDLSELVEGEAQVTPVPGGAR--FRTLEPIPLKVYRNGIMMFDGPFRPFYDPSTQRCLRDILDGFFPSELQRLYPDGVPFKVSDLRNQIYPEDGLGQFPGEGRVVGRQKMRK------------------VTDRVEETSGSRMTAEQFLNRLP-KCIIRQGEVIDIRGPIRDTLQNCCPMPARIQEIIVETPALASERQRSQESPDMPMPLLSMLRIKSENGEQAFLLMMWPEDTIGDVRKLLAQARDMDSAAFEILSTFPPT-VYQDDTVTLQAAGLVPN 343
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Mouse
Match: Ubxn11 (UBX domain protein 11 [Source:MGI Symbol;Acc:MGI:1914836])

HSP 1 Score: 55.0694 bits (131), Expect = 1.815e-8
Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 3 
Query:  324 DYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGE 587
            D EL++ + +++ +LE   + Q  E+  K  +I  LED  +  Q  +  N+   +R  +LE +C +LQ+QI EME FLSDYGL WVGE
Sbjct:   69 DSELMASMTRKLQELEQQLQAQNDEMLSKERKILDLEDLVQTLQQHQ--NNAALQRQEELETQCIQLQRQIGEMERFLSDYGLQWVGE 154
[Close]
BLAST of UBX domain-containing protein 11-like vs. UniProt/SwissProt
Match: sp|Q8R512|UBX11_RAT (UBX domain-containing protein 11 OS=Rattus norvegicus OX=10116 GN=Ubxn11 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.623e-52
Identity = 128/428 (29.91%), Postives = 227/428 (53.04%), Query Frame = 3 
Query:  321 EDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGE------SNGPPIVESGEINLWKDEEVNSFDP-DKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENT--LPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMK 1577
             D EL++ + +++ +LE   + + +E+  K  +I  LED   L Q  +Q + ++  R  +LE +C +LQ+Q+ EME FL+DYGL WVGE      S G  I ES E +  K ++   + P D   PP+   VD+D+++ ++++L+ L+   E+ +T   P   + +  + +PL LY NGI +F GPFR F D  T+  ++DI+DG+FPSEL+  YP GVP  + D RN  +    +  F G G+ +G Q                       T+ + + S +++T  +FLN+LP   I + G ++ IR  I+D L+N   +P    E I  T   + +   T          ++ ++I+S +G + + + MR    + ++  +L+   ++    F ++S++PP     + +++L+  GL PNA+L ++
Sbjct:   67 HDSELLTSMARKLQELEQQLKARNEEMLSKEQKILALED---LVQTLQQ-HQSSTTREEELETQCIQLQRQVGEMERFLNDYGLQWVGEPMDQENSEGKIISESDERDWMKAKKF--WKPGDSIVPPE---VDFDRLLSSLQDLSELVVEGEAQVTPV-PGGAQFRTLEPIPLKLYRNGIMMFDGPFRPFYDPYTQRCLRDILDGFFPSELQRLYPDGVPFKVSDLRNQVYPEDGLGPFPGEGRVVGRQKIRK------------------VTDRVEETSGSRMTAEKFLNRLPKCVI-RQGEVIDIRGPIRDTLQNCCPMPVRIQEIIVETPALASERQRTQESPNMPVPPLSMLRIKSENGEQAFLLMMRPEDTIGDVRNLLAQARDMDSAAFEILSTFPPT-VYRDDTVTLQAAGLVPNATLLLR 464
[Close]
BLAST of UBX domain-containing protein 11-like vs. UniProt/SwissProt
Match: sp|Q5T124|UBX11_HUMAN (UBX domain-containing protein 11 OS=Homo sapiens OX=9606 GN=UBXN11 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 7.343e-49
Identity = 124/424 (29.25%), Postives = 216/424 (50.94%), Query Frame = 3 
Query:  312 PLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTK-QINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGE------SNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENT--LPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTP 1556
            P S D EL++ + +++  LE   + Q  EI  K  +I  LED   L Q  +    +   +R  +LE  C +LQ+Q+ EME FLSDYGL WVGE      S    + E GE + W   +      D   PP+   VD+D+++ ++++L+ L+   ++ +T   P    L+  + +PL LY NGI +F GPF+ F D ST+  ++DI+DG+FPSEL+  YP+GVP  + D RN  +    ++ F G G+ +G Q     L                  + + +   +++T  +FLN+LP   I + G ++ IR  I+D L+N   LP+   E +  T   + + + +          ++ ++I+S +G + + + M+    + ++  +L+    +    F + S++PP     + +L+L+  GL P
Sbjct:   68 PASHDSELMAFMTRKLWDLEQQVKAQTDEILSKDQKIAALED---LVQTLRPHPAEATLQRQEELETMCVQLQRQVREMERFLSDYGLQWVGEPMDQEDSESKTVSEHGERD-WMTAKKFWKPGDSLAPPE---VDFDRLLASLQDLSELVVEGDTQVTPV-PGGARLRTLEPIPLKLYRNGIMMFDGPFQPFYDPSTQRCLRDILDGFFPSELQRLYPNGVPFKVSDLRNQVYLEDGLDPFPGEGRVVGRQLMHKAL------------------DRVEEHPGSRMTAEKFLNRLPKFVI-RQGEVIDIRGPIRDTLQNCCPLPARIQEIVVETPTLAAERERSQESPNTPAPPLSMLRIKSENGEQAFLLMMQPDNTIGDVRALLAQARVMDASAFEIFSTFPPTL-YQDDTLTLQAAGLVP 463
[Close]
BLAST of UBX domain-containing protein 11-like vs. UniProt/SwissProt
Match: sp|Q9D572|UBX11_MOUSE (UBX domain-containing protein 11 OS=Mus musculus OX=10090 GN=Ubxn11 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 6.770e-48
Identity = 124/421 (29.45%), Postives = 223/421 (52.97%), Query Frame = 3 
Query:  321 EDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVE--SGEINLWKDEEVNSFDPDKEYPP-DKYI---VDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENT--LPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPN 1559
             D EL++ + +++ +LE   + Q  E+  K  +I  LED  +  Q  +  N+   +R  +LE +C +LQ+QI EME FLSDYGL WVGE    P+ +  S E  + +++E +     K + P D ++   VD+DK++ ++++L+ L++ E  +  + G  R   +  + +PL +Y NGI +F GPFR F D ST+  ++DI+DG+FPSEL+  YP GVP  + D RN  +    +  F G G+ +G Q                       T+ + + S +++T  QFLN+LP   I + G ++ IR  I+D L+N   +P+   E I  T   + +   +          ++ ++I+S +G + + + M     + ++ ++L+   ++    F ++S++PP     + +++L+  GL PN
Sbjct:   69 HDSELMASMTRKLQELEQQLQAQNDEMLSKERKILDLEDLVQTLQQHQ--NNAALQRQEELETQCIQLQRQIGEMERFLSDYGLQWVGE----PMDQENSEEKTVSENDERDWMKAKKFWKPGDSFVPPEVDFDKLMASLQDLSELVEGEAQVTPVPGGAR--FRTLEPIPLKVYRNGIMMFDGPFRPFYDPSTQRCLRDILDGFFPSELQRLYPDGVPFKVSDLRNQIYPEDGLGQFPGEGRVVGRQKMRK------------------VTDRVEETSGSRMTAEQFLNRLP-KCIIRQGEVIDIRGPIRDTLQNCCPMPARIQEIIVETPALASERQRSQESPDMPMPLLSMLRIKSENGEQAFLLMMWPEDTIGDVRKLLAQARDMDSAAFEILSTFPPT-VYQDDTVTLQAAGLVPN 461
[Close]
BLAST of UBX domain-containing protein 11-like vs. TrEMBL
Match: V3ZLB7 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_233217 PE=4 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 4.559e-73
Identity = 189/558 (33.87%), Postives = 297/558 (53.23%), Query Frame = 3 
Query:   18 MTNPLSSLNRYPRRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDKEFNDLLDDVTSNMAKNNLKK--YSKELMKSNLQPL--TGS-----YTSRTDESVNFKPLSE---DYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEI------------NLWK-DEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYF-DIKQINAFQGIGKTLGGQSTTSKLLND--GEKIIVDNKYTQPFTEI---MSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILE----NTLPSSNVET-ISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMKMV 1583
            M++PL SL + P    K + F      L  + G       Q   P   D E + LLD++T+NMA N +K    S     +   PL  TGS      T  T   +N    S    D++L+S +M +++ LE   +FQ KE+ +K  R++ILEDK ++ +N  + N+    +V++LE +C  LQ+QI EME FLSDYG+IW+GE +        E              +W+    V+S  P        + +DYD++I NI++LN+L     + +T T      LK  +A+PLTL+ NGI L+ GPFR FSD  T++ IQD++DGYFPSEL+ RYP G+P  + D+R+I F D +    F+G G+ LGG++  S+L+     E+       T+  + +    S+     + V   LNKLP  S+ +DG+++ IRNSI   ++    NT+  S VET +S      ++ +   ++   +   I  ++I+S  GN  Y + M+ T  + EL Q L      I+ +F ++S+Y P R  T+ + +L+DCGL PNA L ++ +
Sbjct:    1 MSSPLHSLKKGP----KSRMFVGTGLSLDNV-GQRPVPFRQ---PNYTDDE-SRLLDEITTNMATNRIKAQNISTTTGSNGPSPLPSTGSPSLPKLTKNTSSRLNHMTHSSGPTDHDLMSLMMNKVTLLEQRVQFQNKEMSEKDKRVRILEDKIRIMKNASESNEPG--QVKELEKKCLLLQQQIHEMETFLSDYGMIWMGEKSSEESEVYLEEEEEEEEEETEDEGMWRPGSSVSSIRP--------HHLDYDQLIENIKDLNILAGEGVAKVTKTT-DGARLKIPEAIPLTLFRNGIMLYQGPFRPFSDPETQLCIQDLMDGYFPSELQHRYPDGIPFAVSDKRDIKFSDKRNKKIFEGSGQILGGETKPSRLIPSKLAERSGRGRNITESDSRVGLETSEIPGGLVRVDDLLNKLPK-SVIRDGKVIDIRNSIGQHIKGDGNNTVGVSVVETPVSLHMMKRLEENGKRSERPVTPRNITTLRIKSECGNHTYIVKMKFTDTIGELKQYLQKHRPGIRKKFTVMSTY-PTRSYTDDTATLEDCGLVPNAVLHLRSI 536
[Close]
BLAST of UBX domain-containing protein 11-like vs. TrEMBL
Match: A0A1S3JFB3 (UBX domain-containing protein 11 OS=Lingula unguis OX=7574 GN=LOC106172768 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 4.845e-71
Identity = 179/540 (33.15%), Postives = 289/540 (53.52%), Query Frame = 3 
Query:   18 MTNPLSSLNRYPRRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDKEFNDLLDDVTSNMAKNNLKKYSKELMKSNLQPLTGSYTSRTDESVNFKPLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIV------ESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMT-GPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYF-DIKQINAFQGIGKTLGGQSTTSKL----LNDGEKIIVDNKYTQPFTEI-MSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDIL----ENTLPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMKMVK 1586
            M++PLSSL +  + P              T +G+ +        P+  + E + LL+++T+N++ +   K   +     L  L  + TS+  ++V+      D +L++ +M RIS +E   +FQ KEI +K  +IKILEDK ++ Q  K  ND    RV +LE +C  LQ+QI EM+ FL DYG++WVG+ + P         E+ +     DE  + + P+  Y   ++ VDYD I+ NI ELN +     + I  T G  R  LK    V LTLYANGI +FSGPFR F+D  T+  +QD++DGYFP EL+ RYP GVP  L D+RN++F D +  + F+G G+ LGG +  S+L    + D  K     K       I  S+    ++TV QFL++LP + I K+G+++ IR SI + +    E+   S  +      K    ++D   +    S   +  ++I+S  G++ Y + M+ST  + ++ Q L +      + + ++++Y P +   + S +L+ CGL PNA+L ++ VK
Sbjct:    1 MSSPLSSLKKPKKSPL-------------TPTGSRNVPFRH---PEYTEDE-SKLLEEITTNISTSK-NKQRLDPFGGGLPKLKDTTTSKPTKTVS---APSDMDLMATMMSRISIMEQKIQFQAKEINEKEKKIKILEDKLRILQKAK--NDDKPGRVAELEKKCLLLQQQIHEMDAFLMDYGMVWVGDKSNPDSEKYYDEDEAFDAMSDSDEPTSMWRPETSYSNQEFKVDYDLIVENINELNAIAGEGVAKIQHTTGGAR--LKIPDPVQLTLYANGILMFSGPFRPFTDPLTQQCVQDLMDGYFPGELQIRYPDGVPFILTDKRNVHFKDKRNTDVFKGTGQLLGGDTKPSRLVPSNIQDINKATNTTKAQHQENRIEESEVPGPKLTVDQFLHRLPQNVI-KNGKVIDIRGSIANTVGGKGEDKQNSVTLVETDVVKEMKERLDMDQSSRPPSARNLTTLRIKSESGDQTYILKMKSTDTIGKVRQYLDNQRPRGAEPYKILTAY-PNKVYDDNSATLEKCGLVPNAALHLRAVK 513
[Close]
BLAST of UBX domain-containing protein 11-like vs. TrEMBL
Match: F7AR48 (Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 7.471e-69
Identity = 149/433 (34.41%), Postives = 254/433 (58.66%), Query Frame = 3 
Query:  324 DYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEV-------NSFDPDKEY--PPDKYIVDYDKIIFNIEELNMLMKSEESLITMT-GPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYF-DIKQINAFQGIGKTLGGQSTTSKLLNDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENT----LPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMK 1577
            D EL+S +MKRI+QLE    F  KE+ +K  RIKILEDK  L++N +        +V QLE +C +LQ++I EME FL+DYG+IWVGE + P    S E     D+ V        S+   K    PP+ + VDYD ++ NI+ELN++    ++ I  T G  +++ +K   VPL LYANGI LF+GPFR  SD +T+  + DI DGYFPSEL++RYP GVPI + D+R+I F D ++   F G+G++L  +   +K L +  ++                    +++V QFL+K+P  S+ + G+++ IR+S+K+ L ++    + +  VET  + KN   +++    +   S  ++  I+++S DG+K++ + ++ +  +++L   +       ++ + ++S++ P ++ +++  +++D GL PNA+L +K
Sbjct:    7 DMELLSTMMKRITQLEKQVAFYSKEVVEKDTRIKILEDKLALFKNKESKESDEPGKVAQLEMKCLQLQQEIYEMEAFLADYGMIWVGEKSNP---NSKEYLENDDDSVPVATVTDGSWAQGKTIYPPPENFKVDYDLVLRNIQELNIIAGDGQADIVKTKGGAKLQAQK--TVPLILYANGIMLFNGPFRPLSDVTTQRCLCDITDGYFPSELQERYPDGVPIQVTDKRHIKFKDARKAEIFPGVGRSLLDKDNIAKNLEESSEL-----------------PGLRMSVEQFLDKVP-KSVIRGGKVVDIRSSLKESLTDSTRGKVTTEIVET-EAVKNMQHRMEIPQQERPVSARDVTTIRVKSEDGSKIFILKLKFSDTIQDLRNYIKKQRPRHREPYDILSTF-PNQKHSDLKKTMQDSGLVPNATLFLK 414
[Close]
BLAST of UBX domain-containing protein 11-like vs. TrEMBL
Match: A0A2G8KU47 (Putative UBX domain-containing protein 11 OS=Stichopus japonicus OX=307972 GN=BSL78_11589 PE=4 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.844e-68
Identity = 146/430 (33.95%), Postives = 252/430 (58.60%), Query Frame = 3 
Query:  324 DYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQIN--DTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEVNSFDPDKEYPPD-KYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYF-DIKQINAFQGIGKTLGGQSTTSKLL------NDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENTLPSSNVETISSTKNASIQIDETTNDDLNSTAE---IAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCM 1574
            D++L++ +M +I++LE+  +   KE+ +K  +I IL++K KL +    +   + NA+++++LE +C  LQ QI EME FL+DYG+++VG S+      +G      D   N + PD        + VD+DKI+ N+ ELN+L    E  +  T  +  +L  K+++PLT+YANGI +F+GPFRSF ++ T+  +QD++DG+FPSEL+ +YP GVPI L D+R+  F D +    F GIG+ LGG++T S+++           +  + K  + F +  S+    Q+++ QFLNKLP  S+ KDG+++ IR+S+   L +    ++V       N   QI    N D  ++++   IA ++++S  G++ + I M+    +++L   L  + +     + LV+S+ P +    + ++L +CGLTPNA+L M
Sbjct:   80 DFDLMNGMMNKIAKLELQVQLYAKEVIEKDKKIGILQEKVKLKEKYSSMGHQENNAQKLKELETKCVELQNQIKEMEDFLADYGMVFVGSSHSQ---VAGVYEELADVRENVWRPDLSIAGSTNFHVDFDKIVKNVRELNVLGGEGEKKVQHT-VKGAKLTTKESIPLTIYANGIFMFNGPFRSFENQETQQCVQDLMDGFFPSELQKKYPDGVPIELNDQRDTLFEDSRSREHFPGIGQLLGGENTPSRIVPSNLDKTTNTDVTNEGKGMKTFHQT-SRPPGIQMSMEQFLNKLPP-SVLKDGKVIDIRSSVASNLMDKAQHTSVTETPVVANTKCQI----NQDGRASSDQSMIATLRVKSETGDQTFIIKMKYEDTIQDLRDQLDRIRSASAPAYELVTSF-PYQVYQNLDMTLDECGLTPNATLHM 498
[Close]
BLAST of UBX domain-containing protein 11-like vs. TrEMBL
Match: A0A1W2WQK1 (UBX domain-containing protein 11-like OS=Ciona intestinalis OX=7719 GN=LOC100185765 PE=4 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 6.441e-68
Identity = 152/440 (34.55%), Postives = 264/440 (60.00%), Query Frame = 3 
Query:  324 DYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEE------VNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMT-GPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYF-DIKQINAFQGIGKTLGGQ----STTSKLLNDGEKIIVDNKYTQPFT------EIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENT----LPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMK 1577
            D EL+S +MKRI+QLE    F  KE+ +K  RIKILEDK  L++N +        +V QLE +C +LQ++I EME FL+DYG+IWVGE + P   E     L  D++      V      ++ PP+ + VDYD ++ NI+ELN++    ++ I  T G  +++ +K   VPL LYANGI LF+GPFR  SD +T+  + DI DGYFPSEL++RYP GVPI + D+R+I F D ++   F G+G++L  +     T++++L+  + +   +K T   T      E  S+    +++V QFL+K+P  S+ + G+++ IR+S+K+ L ++    + +  VET  + KN   +++    +   S  ++  I+++S DG+K++ + ++ +  +++L   +       ++ + ++S++ P ++ +++  +++D GL PNA+L +K
Sbjct:  108 DMELLSTMMKRITQLEKQVAFYSKEVVEKDTRIKILEDKLALFKNKESKESDEPGKVAQLEMKCLQLQQEIYEMEAFLADYGMIWVGEKSNPNSKEY----LENDDDSVPVATVTDGSWAQDPPPENFKVDYDLVLRNIQELNIIAGDGQADIVKTKGGAKLQAQK--TVPLILYANGIMLFNGPFRPLSDVTTQRCLCDITDGYFPSELQERYPDGVPIQVTDKRHIKFKDARKAEIFPGVGRSLLDKDNIAKTSTQILHKEDLV---SKQTNTGTSSPDDLEESSELPGLRMSVEQFLDKVP-KSVIRGGKVVDIRSSLKESLTDSTRGKVTTEIVET-EAVKNMQHRMEIPQQERPVSARDVTTIRVKSEDGSKIFILKLKFSDTIQDLRNYIKKQRPRHREPYDILSTF-PNQKHSDLKKTMQDSGLVPNATLFLK 535
[Close]
BLAST of UBX domain-containing protein 11-like vs. Ensembl Cavefish
Match: ubxn11 (UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125])

HSP 1 Score: 206.068 bits (523), Expect = 1.502e-59
Identity = 142/434 (32.72%), Postives = 235/434 (54.15%), Query Frame = 3 
Query:  324 DYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQIN---DTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVES-------GEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLN---DGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENTLPSSNVETISSTKNASIQIDE---TTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMK 1577
            D+EL+S +MKR+ QLE   + Q  +I  K+ RI +LE+K +L Q  +  N   D  AER       C +LQ+Q+ EME FL+DYG+IWVG  NG    +         E  LW+        P     P  + V++D ++ N+ +LN+L    ES +T   P    L +   V L LY NGI +F+GPFRS+ D ST+  +QD++DGYFPSEL+DR+P GV   + DRR   F  ++   F G G T+GG  T  + L+   +  +I++D   +Q         +  +I++ +FL+KLP  ++ K G+++ IR+S+K  L+ +   +   + +  +  ++Q       + + + S AE+  ++++S DG K + + M  T  +  L Q L +        + ++S + P R  ++ + +L+  GLTPNA+L ++
Sbjct:   81 DFELMSSMMKRLGQLEKKVKTQALDINSKMKRIAVLEEKLQLLQGRRDRNGQEDHLAER-------CSKLQRQVWEMEKFLNDYGMIWVG--NGEDDDDDDAAEEAVSEDQLWR--------PGASVVPG-FSVNFDLVVQNVLDLNILAGEGESCVTSV-PGGARLTRPDPVSLQLYKNGIVMFNGPFRSYQDPSTQRCMQDLMDGYFPSELQDRFPDGVIFQIQDRRGEEFRGRRPIGFPGKGHTVGG--TEEEPLDQQKETNQILLDQNQSQ--------RTGHKISMERFLSKLP-ENVVKGGKVISIRSSLKAHLQGSSDGAESHSATVIETPALQALRERLESREAIGSAAEVTTLRVKSEDGEKTFIMKMLFTDTIGHLRQHLDAHRGSSSPAYDIISGF-PQRCHSDDTQTLQAYGLTPNAALLLR 483
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Nematostella
Match: EDO29444 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T3M1])

HSP 1 Score: 137.117 bits (344), Expect = 7.637e-37
Identity = 85/226 (37.61%), Postives = 132/226 (58.41%), Query Frame = 3 
Query:  324 DYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEVNS-----------FDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINL 968
            D+EL+  ++ R++Q E   R  +KEI DK  +IKIL++K +L    +  +      +  LE +C+ LQ Q+ EME FL+DYG++WVG S+     ES  + L  D   N            ++P        + V++D ++ N++ELN+L     ++I+ T      LK   ++PL LY NGI +F GPFR F+D +T+  ++DI++GYFPSEL+ RYP GVPIN+
Sbjct:   39 DHELMGSMVSRLAQAENELRNAKKEIIDKDKKIKILQEKVQLLDKARGYSSGT---IGDLERKCQALQAQVHEMEEFLADYGMVWVGNSS---PTESAYMPLDDDAHPNEDSMVTPTGCGVWNPAASVANPSFEVNFDLVLKNVKELNVLAGEGCAVISRTK-DGARLKVPDSIPLALYYNGIVMFEGPFRPFTDPTTQQCMRDIMEGYFPSELQSRYPDGVPINV 257
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BLAST of UBX domain-containing protein 11-like vs. Planmine SMEST
Match: SMESG000021828.1 (SMESG000021828.1)

HSP 1 Score: 707.983 bits (1826), Expect = 0.000e+0
Identity = 353/371 (95.15%), Postives = 355/371 (95.69%), Query Frame = 3 
Query:   18 MTNPLSSLNRYPRRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDKEFNDLLDDVTSNMAKNNLKKY--------------SKELMKSNLQPLTGSYTSRTDESVNFKPLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKII 1088
            MTNPLSSLNRYPRRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDKEFNDLLDDVTS+MA NNLKK               SKELMKSNLQPLTGSYTSRTDESVNFKPLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKI+
Sbjct:    1 MTNPLSSLNRYPRRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDKEFNDLLDDVTSDMAINNLKKCFLFDFINYLFYQVDSKELMKSNLQPLTGSYTSRTDESVNFKPLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGYFPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLLNDGEKIM 371
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BLAST of UBX domain-containing protein 11-like vs. Planmine SMEST
Match: SMESG000021828.1 (SMESG000021828.1)

HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 291/308 (94.48%), Postives = 292/308 (94.81%), Query Frame = 3 
Query:   18 MTNPLSSLNRYPRRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDKEFNDLLDDVTSNMAKNNLKKY--------------SKELMKSNLQPLTGSYTSRTDESVNFKPLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQ 899
            MTNPLSSLNRYPRRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDKEFNDLLDDVTS+MA NNLKK               SKELMKSNLQPLTGSYTSRTDESVNFKPLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQ
Sbjct:    1 MTNPLSSLNRYPRRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDKEFNDLLDDVTSDMAINNLKKCFLFDFINYLFYQVDSKELMKSNLQPLTGSYTSRTDESVNFKPLSEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQINDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESGEINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLITMTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQ 308
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BLAST of UBX domain-containing protein 11-like vs. Planmine SMEST
Match: SMESG000021820.1 (SMESG000021820.1)

HSP 1 Score: 306.99 bits (785), Expect = 4.878e-103
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 3 
Query: 1125 MSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENTLPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMKMVK 1586
            MSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENTLPSSNVETISSTKNASIQIDETTNDDLNST EIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMKMVK
Sbjct:    1 MSKDSSTQITVGQFLNKLPAHSISKDGRIMIIRNSIKDILENTLPSSNVETISSTKNASIQIDETTNDDLNSTGEIAQIKIRSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLTEMSLSLKDCGLTPNASLCMKMVK 154
The following BLAST results are available for this feature:
BLAST of UBX domain-containing protein 11-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
UBXN117.820e-5029.25UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC... [more]
UBXN117.820e-5029.25UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC... [more]
UBXN111.529e-4929.25UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC... [more]
UBXN111.529e-4929.25UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC... [more]
UBXN114.650e-3536.73UBX domain protein 11 [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ubxn111.915e-6129.55UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-10... [more]
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
UBXN116.799e-6933.73UBX domain protein 11 [Source:NCBI gene;Acc:100493... [more]
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Ubxn119.678e-4929.45UBX domain protein 11 [Source:MGI Symbol;Acc:MGI:1... [more]
Ubxn111.777e-3427.91UBX domain protein 11 [Source:MGI Symbol;Acc:MGI:1... [more]
Ubxn111.815e-840.91UBX domain protein 11 [Source:MGI Symbol;Acc:MGI:1... [more]
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BLAST of UBX domain-containing protein 11-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q8R512|UBX11_RAT2.623e-5229.91UBX domain-containing protein 11 OS=Rattus norvegi... [more]
sp|Q5T124|UBX11_HUMAN7.343e-4929.25UBX domain-containing protein 11 OS=Homo sapiens O... [more]
sp|Q9D572|UBX11_MOUSE6.770e-4829.45UBX domain-containing protein 11 OS=Mus musculus O... [more]
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BLAST of UBX domain-containing protein 11-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
V3ZLB74.559e-7333.87Uncharacterized protein OS=Lottia gigantea OX=2251... [more]
A0A1S3JFB34.845e-7133.15UBX domain-containing protein 11 OS=Lingula unguis... [more]
F7AR487.471e-6934.41Uncharacterized protein OS=Ciona intestinalis OX=7... [more]
A0A2G8KU473.844e-6833.95Putative UBX domain-containing protein 11 OS=Stich... [more]
A0A1W2WQK16.441e-6834.55UBX domain-containing protein 11-like OS=Ciona int... [more]
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ubxn111.502e-5932.72UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-10... [more]
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO294447.637e-3737.61Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of UBX domain-containing protein 11-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of UBX domain-containing protein 11-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3
Match NameE-valueIdentityDescription
SMESG000021828.10.000e+095.15SMESG000021828.1[more]
SMESG000021828.10.000e+094.48SMESG000021828.1[more]
SMESG000021820.14.878e-10399.35SMESG000021820.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30029809 ID=SMED30029809|Name=UBX domain-containing protein 11-like|organism=Schmidtea mediterranea sexual|type=transcript|length=1652bp
AATTTTAAATTCTAAAAATGACAAATCCCTTAAGTAGTTTAAATCGATAT
CCACGGAGACCATTTAAAGAAAAAAACTTTTCTAAATTATCTGAAAAACT
TGCAACTCTTAGTGGAGCTTTTGATACTTCAATATGCCAAGATTTATCAC
CTCAAATTTTGGATAAAGAATTCAATGACTTGCTCGACGATGTCACTAGT
AACATGGCTAAAAACAATTTGAAAAAATATTCAAAAGAATTAATGAAATC
AAATTTGCAACCTTTAACGGGAAGTTACACATCACGTACTGACGAATCAG
TGAATTTTAAACCATTAAGTGAAGACTATGAACTAATATCCAAATTAATG
AAAAGAATAAGCCAATTGGAAGTTTCTCAAAGATTTCAGGAAAAAGAAAT
TAAGGATAAAGTATTAAGGATAAAAATTTTAGAAGATAAATGTAAACTAT
ATCAAAATACTAAACAAATCAATGACACAAATGCCGAAAGGGTCAGACAA
CTAGAATATGAATGTGAAAGATTGCAGAAACAAATTTTAGAAATGGAAGT
TTTTCTCTCAGATTACGGTTTGATATGGGTGGGAGAATCAAATGGGCCCC
CTATCGTTGAATCAGGTGAAATAAACTTATGGAAAGACGAAGAAGTAAAT
TCATTTGATCCGGATAAAGAGTATCCTCCAGACAAATATATAGTAGACTA
TGATAAAATTATTTTTAATATAGAAGAATTAAATATGCTTATGAAATCAG
AAGAATCTCTCATTACCATGACAGGGCCCCAACGGATGGAATTAAAGAAA
AAGCAAGCAGTTCCGTTGACTTTGTATGCAAATGGCATATCATTATTTAG
CGGTCCTTTTAGATCATTCTCAGACAAATCAACTAGAATTGTTATTCAAG
ATATTATTGATGGGTACTTTCCGTCTGAACTTGAAGATAGATATCCTTCA
GGTGTACCGATTAATTTGTTTGATAGAAGAAACATATATTTTGATATTAA
ACAAATTAATGCATTCCAAGGAATTGGTAAAACCCTTGGAGGACAATCAA
CGACATCTAAATTATTGAATGATGGCGAAAAAATCATTGTAGATAATAAA
TATACTCAGCCGTTTACAGAGATCATGTCAAAGGATAGCAGCACCCAAAT
AACTGTGGGGCAATTTCTAAACAAATTGCCAGCACATAGCATTAGCAAAG
ATGGAAGAATAATGATCATTAGAAATTCAATAAAGGATATCCTAGAAAAC
ACTTTGCCATCTTCAAATGTGGAAACCATTAGTTCAACAAAGAATGCATC
TATTCAGATTGATGAGACAACAAATGACGATCTCAATTCCACAGCAGAAA
TTGCTCAAATAAAGATTCGGTCATTTGATGGTAACAAGGTTTATAAGATC
AACATGAGATCAACTCAGCTGTTAAAAGAACTGTATCAAATACTTTCTAG
TCTCATTAATGTGATTCAAGATGAATTTCTTCTGGTGTCTTCTTATCCTC
CTTGTCGGCAACTAACAGAAATGAGTCTCTCGTTGAAAGATTGCGGATTA
ACACCGAATGCCTCACTGTGCATGAAAATGGTGAAATAGGATAATAAATA
ATAACTTCATTATTCATTTTTATGCAATATTGTTTATCAAATAAATTTCA
TG
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protein sequence of SMED30029809-orf-1

>SMED30029809-orf-1 ID=SMED30029809-orf-1|Name=SMED30029809-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=524bp
MTNPLSSLNRYPRRPFKEKNFSKLSEKLATLSGAFDTSICQDLSPQILDK
EFNDLLDDVTSNMAKNNLKKYSKELMKSNLQPLTGSYTSRTDESVNFKPL
SEDYELISKLMKRISQLEVSQRFQEKEIKDKVLRIKILEDKCKLYQNTKQ
INDTNAERVRQLEYECERLQKQILEMEVFLSDYGLIWVGESNGPPIVESG
EINLWKDEEVNSFDPDKEYPPDKYIVDYDKIIFNIEELNMLMKSEESLIT
MTGPQRMELKKKQAVPLTLYANGISLFSGPFRSFSDKSTRIVIQDIIDGY
FPSELEDRYPSGVPINLFDRRNIYFDIKQINAFQGIGKTLGGQSTTSKLL
NDGEKIIVDNKYTQPFTEIMSKDSSTQITVGQFLNKLPAHSISKDGRIMI
IRNSIKDILENTLPSSNVETISSTKNASIQIDETTNDDLNSTAEIAQIKI
RSFDGNKVYKINMRSTQLLKELYQILSSLINVIQDEFLLVSSYPPCRQLT
EMSLSLKDCGLTPNASLCMKMVK*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000418head
PLANA:0000420parapharyngeal region
PLANA:0002089reproductive organ
Vocabulary: INTERPRO
TermDefinition
IPR036241NSFL1C_SEP_dom_sf
IPR001012UBX_dom
IPR012989SEP_domain
IPR029071Ubiquitin-like_domsf
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0043130ubiquitin binding
Vocabulary: cellular component
TermDefinition
GO:0005575cellular_component
GO:0005737cytoplasm
GO:0005856cytoskeleton
Vocabulary: biological process
TermDefinition
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..172
NoneNo IPR availablePANTHERPTHR23333UBX DOMAIN CONTAINING PROTEINcoord: 86..522
NoneNo IPR availablePANTHERPTHR23333:SF4UBX DOMAIN-CONTAINING PROTEIN 11coord: 86..522
NoneNo IPR availableCDDcd17077UBX_UBXN11coord: 444..520
e-value: 8.97887E-13
score: 61.4689
IPR001012UBX domainPFAMPF00789UBXcoord: 445..520
e-value: 2.3E-4
score: 21.3
IPR001012UBX domainPROSITEPS50033UBXcoord: 441..519
score: 9.349
IPR012989SEP domainPFAMPF08059SEPcoord: 267..337
e-value: 3.8E-15
score: 56.2
IPR012989SEP domainPROSITEPS51399SEPcoord: 262..326
score: 23.985
IPR036241NSFL1 cofactor p47, SEP domain superfamilyGENE3DG3DSA:3.30.420.210coord: 261..323
e-value: 8.9E-7
score: 30.8
IPR036241NSFL1 cofactor p47, SEP domain superfamilySUPERFAMILYSSF102848NSFL1 (p97 ATPase) cofactor p47, SEP domaincoord: 257..345
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 439..518