Anaphase-promoting complex subunit 2

Overview
NameAnaphase-promoting complex subunit 2
Smed IDSMED30029334
Length (bp)861
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Anaphase-promoting complex subunit 2 (SMED30029334) t-SNE clustered cells

Violin plots show distribution of expression levels for Anaphase-promoting complex subunit 2 (SMED30029334) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Anaphase-promoting complex subunit 2 (SMED30029334) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Anaphase-promoting complex subunit 2 (SMED30029334) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30029334

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30029334SMESG000048530.1 SMESG000022225.1 SmedASXL_015019SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
neoblastSMED30029334SMESG000048530.1 SMESG000022225.1 dd_Smed_v4_7937_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Human
Match: ANAPC2 (anaphase promoting complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:19989])

HSP 1 Score: 119.783 bits (299), Expect = 1.079e-29
Identity = 66/167 (39.52%), Postives = 96/167 (57.49%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITI-VPQGGLTESGDVKCTLREMHDWIPDPIDS 860
              FF++IY   R+E +F IV D+PDS  AI DL+ C+   +  + +   LK+ +  RLLHP V T D+I+ YI  IK+LR+LDP+ V  E+    IR YL  REDT++ IV   LT D +    +  EL++  P ++   Q    +SG       E  DW+PDP+D+
Sbjct:  329 QRFFYRIYASLRIEELFSIVRDFPDSRPAIEDLKYCLERTDQRQQLLVSLKAALETRLLHPGVNTCDIITLYISAIKALRVLDPSMVILEVACEPIRRYLRTREDTVRQIVAG-LTGDSDGTGDLAVELSKTDPASLETGQDSEDDSG-------EPEDWVPDPVDA 487
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Celegans
Match: apc-2 (Anaphase-promoting complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:P34514])

HSP 1 Score: 49.6766 bits (117), Expect = 1.312e-6
Identity = 34/106 (32.08%), Postives = 61/106 (57.55%), Query Frame = 3 
Query:  417 IVMDYPDSVVAINDLRQCILVLNS-GKVMCTK-LKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEEND 728
            I +D+P    ++  ++ C+L  N+ G+V  T  L  ++N +LL  +V T D++  Y   ++SLR +D + V    V   IR YL +R DT++ I+  I T +++N+
Sbjct:  234 IAVDFPVKFRSLITMKYCLLRTNNHGRVDFTNYLIDQVNTKLLVASVDTKDILKAYAACVESLREMDNSCVVMHKVCGVIREYLKRRPDTVQQIISYI-TSNKKNE 338
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Fly
Match: mr (gene:FBgn0002791 transcript:FBtr0072156)

HSP 1 Score: 98.2117 bits (243), Expect = 1.256e-22
Identity = 53/161 (32.92%), Postives = 86/161 (53.42%), Query Frame = 3 
Query:  369 FFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDP 851
            F ++ +  + +   F I++DYPDS+ AI+DL+ C+  ++    +   L++ +  R+LHP V T D+++GY+  IK++R LD T V  E+VT  I+ YL KR DT++ +V  +    EE    +  ELA+   I      G  E            +W PDP
Sbjct:  315 FMYETFAQSVIGQFFSIIIDYPDSIPAIDDLKICMEKIDMRVYLTESLRNSLEARILHPGVNTMDILTGYVAAIKAIRHLDSTGVILEMVTAPIKDYLRKRNDTVRRVVTGLT---EEGPTDLSEELAKGETIKECKDSGTDE-------FSNWENWQPDP 465
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Zebrafish
Match: anapc2 (anaphase promoting complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-081104-256])

HSP 1 Score: 122.094 bits (305), Expect = 9.998e-31
Identity = 65/166 (39.16%), Postives = 94/166 (56.63%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
            ++FF +IY + R+E +F I+ D+P+S  AI DL+ C+   N  + +   LKS    RLLHP V T D+I+ YI  IK+LR LDP+ V  ++    IR YL  REDT++ IV   LT D E    + +EL++  P+ +  Q    E  D +       DW PDP D+
Sbjct:  307 HQFFCRIYVNMRIEELFSIIRDFPESTPAIEDLKFCLERTNQRQQLLASLKSAFETRLLHPGVHTSDIITVYISAIKALRELDPSMVILQVACQPIRKYLRTREDTVRQIVGS-LTGDSEGCTDLANELSRADPVALETQDSEDEGSDPE-------DWTPDPTDA 464
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Xenopus
Match: lhx6 (LIM homeobox 6 [Source:Xenbase;Acc:XB-GENE-493341])

HSP 1 Score: 124.02 bits (310), Expect = 2.287e-31
Identity = 66/166 (39.76%), Postives = 97/166 (58.43%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
              FF+++Y   R+E +F+I+ D+P+S  AI DL+ C+   N  + + T LK+ +  RLLHP V T D+I+ YI  IK+LR LDP+ V  E+    IR YL  REDT++ IV   LT D E    + +EL++  P+    + G     DV     E  DW+PDP+D+
Sbjct:  327 QRFFYRLYASMRIEELFNIIRDFPESKPAIEDLKFCLERTNQRQQLLTSLKNALETRLLHPGVNTSDIITLYISAIKALRELDPSMVILEVACEPIRKYLRTREDTVRQIVAG-LTGDAEGSADLANELSKADPVL---ENGQESDDDVS----EAEDWLPDPVDA 484
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Mouse
Match: Anapc2 (anaphase promoting complex subunit 2 [Source:MGI Symbol;Acc:MGI:2139135])

HSP 1 Score: 115.931 bits (289), Expect = 1.691e-28
Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITI-VPQGGLTESGDVKCTLREMHDWIPDPIDS 860
              FF++IY   R+E +F I+ D+PDS  AI DL+ C+   +  + +   LK  +  RLLHP V T D+I+ YI  IK+LR+LDP+ V  E+    IR YL  REDT++ IV   LT D +    +  EL++  P  +   Q    +SG       E  DW+PDP+D+
Sbjct:  344 QRFFYRIYATLRIEELFSIIRDFPDSRPAIEDLKYCLERTDQRQQLLVSLKVALETRLLHPGVNTCDIITLYISAIKALRVLDPSMVILEVACEPIRRYLRTREDTVRQIVAG-LTGDSDGTGDLAVELSKTDPACLETGQDSEDDSG-------EPEDWVPDPVDA 502
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Mouse
Match: Anapc2 (anaphase promoting complex subunit 2 [Source:MGI Symbol;Acc:MGI:2139135])

HSP 1 Score: 100.523 bits (249), Expect = 2.214e-25
Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHEL 749
              FF++IY   R+E +F I+ D+PDS  AI DL+ C+   +  + +   LK  +  RLLHP V T D+I+ YI  IK+LR+LDP+ V  E+    IR YL  REDT++ IV   LT D +    +  EL
Sbjct:   58 QRFFYRIYATLRIEELFSIIRDFPDSRPAIEDLKYCLERTDQRQQLLVSLKVALETRLLHPGVNTCDIITLYISAIKALRVLDPSMVILEVACEPIRRYLRTREDTVRQIVAG-LTGDSDGTGDLAVEL 185
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. UniProt/SwissProt
Match: sp|Q9UJX6|ANC2_HUMAN (Anaphase-promoting complex subunit 2 OS=Homo sapiens OX=9606 GN=ANAPC2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.181e-29
Identity = 66/167 (39.52%), Postives = 96/167 (57.49%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITI-VPQGGLTESGDVKCTLREMHDWIPDPIDS 860
              FF++IY   R+E +F IV D+PDS  AI DL+ C+   +  + +   LK+ +  RLLHP V T D+I+ YI  IK+LR+LDP+ V  E+    IR YL  REDT++ IV   LT D +    +  EL++  P ++   Q    +SG       E  DW+PDP+D+
Sbjct:  329 QRFFYRIYASLRIEELFSIVRDFPDSRPAIEDLKYCLERTDQRQQLLVSLKAALETRLLHPGVNTCDIITLYISAIKALRVLDPSMVILEVACEPIRRYLRTREDTVRQIVAG-LTGDSDGTGDLAVELSKTDPASLETGQDSEDDSG-------EPEDWVPDPVDA 487
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. UniProt/SwissProt
Match: sp|Q8BZQ7|ANC2_MOUSE (Anaphase-promoting complex subunit 2 OS=Mus musculus OX=10090 GN=Anapc2 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.183e-27
Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITI-VPQGGLTESGDVKCTLREMHDWIPDPIDS 860
              FF++IY   R+E +F I+ D+PDS  AI DL+ C+   +  + +   LK  +  RLLHP V T D+I+ YI  IK+LR+LDP+ V  E+    IR YL  REDT++ IV   LT D +    +  EL++  P  +   Q    +SG       E  DW+PDP+D+
Sbjct:  344 QRFFYRIYATLRIEELFSIIRDFPDSRPAIEDLKYCLERTDQRQQLLVSLKVALETRLLHPGVNTCDIITLYISAIKALRVLDPSMVILEVACEPIRRYLRTREDTVRQIVAG-LTGDSDGTGDLAVELSKTDPACLETGQDSEDDSG-------EPEDWVPDPVDA 502
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. UniProt/SwissProt
Match: sp|Q551S9|APC2_DICDI (Anaphase-promoting complex subunit 2 OS=Dictyostelium discoideum OX=44689 GN=anapc2 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.597e-20
Identity = 58/175 (33.14%), Postives = 85/175 (48.57%), Query Frame = 3 
Query:  384 YFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTES----------------GDVKCTLREMHDWIPDPIDS 860
            Y   R+  +FD+++ YPDS+ ++ DL  C   +   K M T LK  ++ RLLHP   T D+I+ YI  I ++ ++DP+ +  E V   IR YL +REDTI+ I+        E  N IY EL    P      GG  +S                GD   ++ +   WIP+ ID 
Sbjct:  370 YSQQRISELFDMIVQYPDSLPSLEDLSICFQKIPIEKTMITNLKRVLHNRLLHPGANTSDIITQYISTIHAMDIIDPSGMVMEKVGKPIREYLSQREDTIRCIISSFT----EESNEIYQELCNYDP---QDNGGDDDSNNSLLAFGNCDLYVDEGDNFSSIDDFKFWIPNKIDG 537
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. UniProt/SwissProt
Match: sp|Q8H1U5|APC2_ARATH (Anaphase-promoting complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=APC2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.355e-17
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 3 
Query:  369 FFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIV 695
            F ++   D R+  +F+I++DYP+S  AI DL+QC+        +     S +  RLL    +T D++  Y+  IK+LR +DP  VF E V   IR YL  R+DTIK IV
Sbjct:  355 FAYETLQDLRIAKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLVESFISSLKYRLLTAGASTNDILHQYVSTIKALRAIDPAGVFLEAVGEPIRDYLRGRKDTIKCIV 463
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. UniProt/SwissProt
Match: sp|Q874R3|APC2_SCHPO (Anaphase-promoting complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=apc2 PE=1 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.488e-7
Identity = 46/155 (29.68%), Postives = 74/155 (47.74%), Query Frame = 3 
Query:  396 RVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
            R ++I DIV+ YP+S+ AI DLR         + +      +    +L  +  +  ++  Y+  I+    LDP  V  +     IRS+L +RED  K +V  +L VD E    +  EL+Q      +P    TE+ D      + + W+PDPID+
Sbjct:  222 RSDNILDIVLHYPNSLGAIEDLRLVARQKQQRQYLTETFVKDCTSSILTASSDSSYILLFYVSTIRCFVALDPPGVLLDKAAKPIRSFLNEREDAYKCLV-SLLFVDGEKG--LRSELSQ------IP----TENIDSTTDRFDNYHWMPDPIDA 363
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. TrEMBL
Match: A0A091KF91 (Anaphase-promoting complex subunit 2 (Fragment) OS=Chlamydotis macqueenii OX=187382 GN=N324_03820 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.187e-30
Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
              FF++IY   R+E +F I+ D+PDS  A+ DL+ C+   N  + + + LKS + +RLLHP V T D+I+ YI  IK+LR LDP+ V  E+    IR YL  REDT++ IV   LT D E    + +EL++  P+T+  + G     D+     E  DW+PDP+D+
Sbjct:  290 QRFFYRIYASMRIEELFSIIRDFPDSKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIKALRELDPSMVILEVACEPIRKYLRTREDTVRQIVAG-LTGDAEGSGDLANELSKADPVTL--ENGQESDDDIS----EPGDWVPDPVDA 448
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. TrEMBL
Match: A0A093G622 (Anaphase-promoting complex subunit 2 (Fragment) OS=Dryobates pubescens OX=118200 GN=N307_10583 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.168e-30
Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
              FF++IY   R+E +F I+ D+PDS  A+ DL+ C+   N  + + + LKS + +RLLHP V T D+I+ YI  IK+LR LDP+ V  E+    IR YL  REDT++ IV   LT D E    + +EL++  P+T+  + G     D+     E  DW+PDP+D+
Sbjct:  290 QRFFYRIYASMRIEELFSIIRDFPDSKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIKALRELDPSMVILEVACEPIRKYLRTREDTVRQIVAG-LTGDAEGSGDLANELSKADPVTL--ENGQESDDDIS----EPGDWVPDPVDA 448
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. TrEMBL
Match: A0A091L5X7 (Anaphase-promoting complex subunit 2 (Fragment) OS=Cathartes aura OX=43455 GN=N323_01462 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 5.055e-30
Identity = 66/166 (39.76%), Postives = 99/166 (59.64%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
              FF++IY   R+E +F I+ D+P+S  A+ DL+ C+   N  + + + LKS + +RLLHP V T D+I+ YI  IK+LR LDP+ V  E+    IR YL  REDT++ IV   LT D E    + +EL++  P+T+  + G     D+     E  DW+PDP+D+
Sbjct:   39 QRFFYRIYASMRIEELFSIIRDFPESKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIKALRELDPSMVILEVACEPIRKYLRTREDTVRQIVAG-LTGDAEGSGDLANELSKADPVTL--ENGQESDDDIS----EPGDWVPDPVDA 197
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. TrEMBL
Match: A0A091J2H1 (Anaphase-promoting complex subunit 2 (Fragment) OS=Egretta garzetta OX=188379 GN=Z169_02130 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.196e-30
Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
              FF++IY   R+E +F I+ D+PDS  A+ DL+ C+   N  + + + LKS + +RLLHP V T D+I+ YI  IK+LR LDP+ V  E+    IR YL  REDT++ IV   LT D E    + +EL++  P+T+  + G     D+     E  DW+PDP+D+
Sbjct:  290 QRFFYRIYASMRIEELFSIIRDFPDSKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIKALRELDPSMVILEVACEPIRKYLRTREDTVRQIVAG-LTGDAEGSGDLANELSKADPVTL--ENGQESDDDIT----EPGDWVPDPVDA 448
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. TrEMBL
Match: A0A3M0IYD0 (CULLIN_2 domain-containing protein OS=Hirundo rustica rustica OX=333673 GN=DUI87_30226 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.813e-30
Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = 3 
Query:  369 FFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
            FF++IY   R+E +F I+ D+P+S  A+ DL+ C+   N  + + + LKS + +RLLHP V T D+I+ YI  IK+LR LDP+ V  E+    IR YL  REDT++ IV   LT D E    + +EL++  P+T+  + G     D+     E  DW+PDP+D+
Sbjct:  876 FFYRIYASMRIEELFSIIRDFPESKPAVEDLKFCLERTNQRQQLLSSLKSALEMRLLHPGVNTSDIITLYISAIKALRELDPSMVILEVACEPIRKYLRTREDTVRQIVAG-LTGDAEGSGDLANELSKADPVTL--ENGQESDDDIS----EPGDWVPDPVDA 1032
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Cavefish
Match: anapc2 (anaphase promoting complex subunit 2 [Source:NCBI gene;Acc:103044783])

HSP 1 Score: 124.02 bits (310), Expect = 2.227e-31
Identity = 66/166 (39.76%), Postives = 97/166 (58.43%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
            ++FF +IY + R++ +F I+ D+P+S+ AI DL+ C+   N  + + T LKS    RLLHP V T D+I+ YI  IK+LR LDP+ V  ++    IR YL  REDT++ IV   LT D E+   + +EL++  P+T+  Q    E  D         DW PDP D+
Sbjct:  322 HQFFCRIYVNMRIDELFSIIRDFPESIPAIEDLKFCLERTNQRQQLLTSLKSAFETRLLHPGVHTSDIITVYISAIKALRELDPSMVILQVACQPIRKYLRTREDTVRQIVGS-LTGDAESSCDLANELSRADPVTLETQDSEDEGSDPD-------DWTPDPTDA 479
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Yeast
Match: APC2 (Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the catalytic core of the APC/C; has similarity to cullin Cdc53p [Source:SGD;Acc:S000004117])

HSP 1 Score: 50.447 bits (119), Expect = 1.497e-7
Identity = 34/118 (28.81%), Postives = 59/118 (50.00%), Query Frame = 3 
Query:  372 FHKIYFDTRVESIFDI-VMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEE 722
            F   +   R   IFDI V+ YPDS V + +LR+ +        + T   S+    +L+P+V T D +  Y+  IK+  +LDPT      +T  ++ Y  +R+  +  ++  +L + EE
Sbjct:  275 FESNFLRIRTNEIFDICVLAYPDSKVTLLELRKIMKDFKDYTNIVTTFLSDFKKYILNPSVTTVDALLRYVKTIKAFLVLDPTGRCLHSITTFVKPYFQERKHLVNVLLYAMLDLPEE 392
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Nematostella
Match: EDO33056 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7STC1])

HSP 1 Score: 108.997 bits (271), Expect = 7.614e-27
Identity = 60/166 (36.14%), Postives = 92/166 (55.42%), Query Frame = 3 
Query:  369 FFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHEL--AQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
            F +K Y D R+  +F I++++PDS  AI DL++C+ + N    +   L+     RLLHP   T  ++S Y+  I+SL +LDPT V  E V   +R YL  REDT++ IV    ++ +EN   +  EL   +P PI      G ++S D      +  DW+PDP+D+
Sbjct:   89 FMYKTYADLRIGELFSIIVEFPDSTPAIQDLKECLEMTNQRGQLVNSLREAFETRLLHPGANTSLILSQYVSAIRSLHVLDPTGVILENVCEPVRQYLRTREDTVRCIVS---SLTDENTTELAEELMHGEPHPIDGT---GTSDSED------DEEDWVPDPVDA 242
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Medaka
Match: anapc2 (anaphase promoting complex subunit 2 [Source:NCBI gene;Acc:101154953])

HSP 1 Score: 120.939 bits (302), Expect = 2.248e-30
Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = 3 
Query:  363 NEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
            ++FF +IY + R+E +F I+ D+P+S  AI DL+ C+   N  + + T LKS    RLLHP V T D+++ YI  IK+LR LDP+ V  ++    IR YL  REDT++ IV   LT D E    +  EL++  P+T+  Q    E  D +       DW PDP D+
Sbjct:  308 HQFFCRIYVNMRIEELFSIIRDFPESKAAIEDLKFCLERTNQRQQLLTSLKSAFESRLLHPGVHTSDILTVYISAIKALRELDPSMVILQVACQPIRKYLRTREDTVRQIVAG-LTGDAEGCTDLASELSRGDPVTLEMQDSDDEGTDPE-------DWTPDPTDA 465
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Planmine SMEST
Match: SMESG000022225.1 (SMESG000022225.1)

HSP 1 Score: 515.768 bits (1327), Expect = 0.000e+0
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 3 
Query:    3 IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLXXXXXXXXXXXXXVLKDYIKKILFLYNTEYDVNILXXXXXXXXXXXXXXXXPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
            IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLIPIENIFIDIFIEVLKDYIKKILFLYNTEYDVNILEKIFETKTLIIEKKIIPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS
Sbjct:   51 IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLIPIENIFIDIFIEVLKDYIKKILFLYNTEYDVNILEKIFETKTLIIEKKIIPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 336
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Planmine SMEST
Match: SMESG000048530.1 (SMESG000048530.1)

HSP 1 Score: 474.937 bits (1221), Expect = 6.486e-167
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 3 
Query:    3 IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLXXXXXXXXXXXXXVLKDYIKKILFLYNTEYDVNILXXXXXXXXXXXXXXXXPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDV 809
            IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLIPIENIFIDIFIEVLKDYIKKILFLYNTEYDVNILEKIFETKTLIIEKKIIPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDV
Sbjct:   42 IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLIPIENIFIDIFIEVLKDYIKKILFLYNTEYDVNILEKIFETKTLIIEKKIIPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDV 310
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Planmine SMEST
Match: SMESG000048530.1 (SMESG000048530.1)

HSP 1 Score: 474.167 bits (1219), Expect = 2.076e-166
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 3 
Query:    3 IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLXXXXXXXXXXXXXVLKDYIKKILFLYNTEYDVNILXXXXXXXXXXXXXXXXPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDV 809
            IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLIPIENIFIDIFIEVLKDYIKKILFLYNTEYDVNILEKIFETKTLIIEKKIIPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDV
Sbjct:   42 IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLIPIENIFIDIFIEVLKDYIKKILFLYNTEYDVNILEKIFETKTLIIEKKIIPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDV 310
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Planmine SMEST
Match: SMESG000048530.1 (SMESG000048530.1)

HSP 1 Score: 474.552 bits (1220), Expect = 4.225e-166
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 3 
Query:    3 IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLXXXXXXXXXXXXXVLKDYIKKILFLYNTEYDVNILXXXXXXXXXXXXXXXXPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDV 809
            IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLIPIENIFIDIFIEVLKDYIKKILFLYNTEYDVNILEKIFETKTLIIEKKIIPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDV
Sbjct:   75 IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSCLIPIENIFIDIFIEVLKDYIKKILFLYNTEYDVNILEKIFETKTLIIEKKIIPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELAQPTPITIVPQGGLTESGDV 343
[Close]
BLAST of Anaphase-promoting complex subunit 2 vs. Planmine SMEST
Match: SMESG000013935.1 (SMESG000013935.1)

HSP 1 Score: 109.768 bits (273), Expect = 1.315e-26
Identity = 77/224 (34.38%), Postives = 128/224 (57.14%), Query Frame = 3 
Query:  195 VLKDYIKKILFLYNTEYDVNILXXXXXXXXXXXXXXXXPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAINDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLRLLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILT--VDEENDNCIYHELAQPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS 860
            + ++++K ++  Y   ++V+ L  + +    + E KIIP + PQ  K+   S  + +  F ++ F  ++  I +I+++YP+S   I D ++CI VL+ G+  C  L ++I   LL+ + +T  LI  YICIIKSL+L+DPT  F   V PDI+  +  RED++ SIV K+LT  +  E++N IY EL +     +       E  +V C+L EM+ W P P +S
Sbjct:  126 IFQNHMKSLISSYERNHNVSCLNIMMKENNELFESKIIPFVLPQYSKDSFCSLEMKSAMF-ELCFQFKIPFIMEIILNYPESAETIKDFQKCISVLHLGQSFCDILLNDIKYYLLNGSGSTRALIIAYICIIKSLQLIDPTPCFIGFVIPDIQKCISSREDSVSSIV-KMLTEYMSTESNNPIYKELEE---FKVFMSNSDIEMMNVTCSLEEMYLWNPLPKES 344
The following BLAST results are available for this feature:
BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ANAPC21.079e-2939.52anaphase promoting complex subunit 2 [Source:HGNC ... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
apc-21.312e-632.08Anaphase-promoting complex subunit 2 [Source:UniP... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
mr1.256e-2232.92gene:FBgn0002791 transcript:FBtr0072156[more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
anapc29.998e-3139.16anaphase promoting complex subunit 2 [Source:ZFIN;... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
lhx62.287e-3139.76LIM homeobox 6 [Source:Xenbase;Acc:XB-GENE-493341][more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Anapc21.691e-2838.92anaphase promoting complex subunit 2 [Source:MGI S... [more]
Anapc22.214e-2541.86anaphase promoting complex subunit 2 [Source:MGI S... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9UJX6|ANC2_HUMAN5.181e-2939.52Anaphase-promoting complex subunit 2 OS=Homo sapie... [more]
sp|Q8BZQ7|ANC2_MOUSE1.183e-2738.92Anaphase-promoting complex subunit 2 OS=Mus muscul... [more]
sp|Q551S9|APC2_DICDI8.597e-2033.14Anaphase-promoting complex subunit 2 OS=Dictyostel... [more]
sp|Q8H1U5|APC2_ARATH4.355e-1739.45Anaphase-promoting complex subunit 2 OS=Arabidopsi... [more]
sp|Q874R3|APC2_SCHPO1.488e-729.68Anaphase-promoting complex subunit 2 OS=Schizosacc... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A091KF913.187e-3040.36Anaphase-promoting complex subunit 2 (Fragment) OS... [more]
A0A093G6224.168e-3040.36Anaphase-promoting complex subunit 2 (Fragment) OS... [more]
A0A091L5X75.055e-3039.76Anaphase-promoting complex subunit 2 (Fragment) OS... [more]
A0A091J2H15.196e-3040.36Anaphase-promoting complex subunit 2 (Fragment) OS... [more]
A0A3M0IYD05.813e-3040.24CULLIN_2 domain-containing protein OS=Hirundo rust... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
anapc22.227e-3139.76anaphase promoting complex subunit 2 [Source:NCBI ... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
APC21.497e-728.81Subunit of the Anaphase-Promoting Complex/Cyclosom... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO330567.614e-2736.14Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
anapc22.248e-3039.76anaphase promoting complex subunit 2 [Source:NCBI ... [more]
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BLAST of Anaphase-promoting complex subunit 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000022225.10.000e+0100.00SMESG000022225.1[more]
SMESG000048530.16.486e-167100.00SMESG000048530.1[more]
SMESG000048530.12.076e-166100.00SMESG000048530.1[more]
SMESG000048530.14.225e-166100.00SMESG000048530.1[more]
SMESG000013935.11.315e-2634.38SMESG000013935.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30029334 ID=SMED30029334|Name=Anaphase-promoting complex subunit 2|organism=Schmidtea mediterranea sexual|type=transcript|length=861bp
TAATTTTTAATACCGTATTTAATAAAGAAATAAAATGTAAATTATATGGA
CCATTGAAAAACTACTGTGAGATCCTAATTCATTCCTTTGAAAAATCTAA
CCATAATTACTTTGTTTTATTTGAGAATGTATTTAATATACTGAATTCAT
GCTTAATCCCCATCGAAAATATATTTATAGACATATTTATTGAAGTTTTA
AAAGATTATATCAAGAAAATACTATTTTTATACAACACGGAATACGATGT
CAACATTTTAGAAAAGATTTTTGAAACTAAAACCTTAATAATTGAAAAGA
AAATCATTCCTAGTCTTTTTCCACAAACATTTAAAAATGGAAATTTAAGT
TCGGTTCTGTCCAATGAATTCTTTCACAAGATCTATTTTGATACCAGAGT
TGAATCAATATTTGATATTGTAATGGATTATCCAGATTCAGTCGTAGCTA
TTAATGATTTAAGACAATGTATTTTAGTCTTAAACAGTGGAAAAGTCATG
TGCACCAAATTAAAATCCGAGATCAATTTACGATTGTTGCACCCAGCAGT
CGCCACTCCTGATTTGATTTCCGGGTACATTTGTATCATCAAATCATTAA
GATTACTCGACCCGACTTATGTATTTGAGGAAATTGTCACTCCTGATATC
CGAAGTTATTTATTGAAACGCGAAGATACAATCAAATCTATAGTAGATAA
GATTTTAACGGTTGATGAAGAAAACGACAATTGTATATATCACGAATTAG
CTCAACCAACTCCAATAACGATTGTCCCTCAAGGCGGACTGACTGAAAGT
GGAGATGTAAAATGTACACTGAGAGAGATGCATGACTGGATTCCCGATCC
AATCGATTCAG
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protein sequence of SMED30029334-orf-1

>SMED30029334-orf-1 ID=SMED30029334-orf-1|Name=SMED30029334-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=286bp
IFNTVFNKEIKCKLYGPLKNYCEILIHSFEKSNHNYFVLFENVFNILNSC
LIPIENIFIDIFIEVLKDYIKKILFLYNTEYDVNILEKIFETKTLIIEKK
IIPSLFPQTFKNGNLSSVLSNEFFHKIYFDTRVESIFDIVMDYPDSVVAI
NDLRQCILVLNSGKVMCTKLKSEINLRLLHPAVATPDLISGYICIIKSLR
LLDPTYVFEEIVTPDIRSYLLKREDTIKSIVDKILTVDEENDNCIYHELA
QPTPITIVPQGGLTESGDVKCTLREMHDWIPDPIDS
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000429neoblast
PLANA:0002109X1 cell
Vocabulary: biological process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: molecular function
TermDefinition
GO:0031625ubiquitin protein ligase binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45957FAMILY NOT NAMEDcoord: 118..285