C2H2-type domain-containing protein

Overview
NameC2H2-type domain-containing protein
Smed IDSMED30029309
Length (bp)1535
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of C2H2-type domain-containing protein (SMED30029309) t-SNE clustered cells

Violin plots show distribution of expression levels for C2H2-type domain-containing protein (SMED30029309) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of C2H2-type domain-containing protein (SMED30029309) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for C2H2-type domain-containing protein (SMED30029309) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30029309

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 10

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30029309SMESG000006935.1 SMESG000006932.1 dd_Smed_v4_6216_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30029309SMESG000006935.1 SMESG000006932.1 dd_Smed_v4_6216_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30029309SMESG000006935.1 SMESG000006932.1 dd_Smed_v4_6216_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30029309SMESG000006935.1 SMESG000006932.1 dd_Smed_v4_6216_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30029309SMESG000006935.1 SMESG000006932.1 Contig11849newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30029309SMESG000006935.1 SMESG000006932.1 Contig11849uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30029309SMESG000023342.1 Contig3238GPL15192PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30029309SMESG000006932.1 Contig3238GPL15192PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
epidermisSMED30029309SMESG000006935.1 SMESG000006932.1 dd_Smed_v4_6216_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Category 4 cellSMED30029309SMESG000006935.1 SMESG000006932.1 dd_Smed_v4_6216_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: CCDC33 (coiled-coil domain containing 33 [Source:HGNC Symbol;Acc:HGNC:26552])

HSP 1 Score: 85.1149 bits (209), Expect = 1.816e-17
Identity = 80/274 (29.20%), Postives = 141/274 (51.46%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDI-DSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK--NNKNKAGNLS------------------PIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ-PKLNNINKMSD-----SERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELDE 1506
            Y+ AM++M+ +IL LR Q   L   N +L+       +E     G+  +  +++S    +K+ +LL      S  D+K  +D+V  LQ +LI+KND+E E L + +A   Q  L++  Q ++ K+K LE T++ QE +I KME+ +E    +++K   L+                  P+  +  +   E+ S L  EN +LR E+D  ++ Q P +     + D     S++  L   L+ A+ RI++LE+Q+ ++ R W +EK+ + T L E
Sbjct:   28 YRRAMQKMAEDILSLRRQASILEGENRILRSRLAQQEEEEGQ--GKASEAQNTVS----MKQKLLL------SELDMKKLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAALLKQYQGKLQKMKALEETVRHQEKVIEKMERVLEDRLQDRSKPPPLNRQQGKPYTGFPMLSASGLPLGSMGENLPVELYSVLLAENAKLRTELDKNRHQQAPIILQQQALPDLLSGTSDKFNLLAKLEHAQSRILSLESQLEDSARRWGREKQDLATRLQE 289
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: CCDC33 (coiled-coil domain containing 33 [Source:HGNC Symbol;Acc:HGNC:26552])

HSP 1 Score: 85.1149 bits (209), Expect = 1.816e-17
Identity = 80/274 (29.20%), Postives = 141/274 (51.46%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDI-DSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK--NNKNKAGNLS------------------PIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ-PKLNNINKMSD-----SERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELDE 1506
            Y+ AM++M+ +IL LR Q   L   N +L+       +E     G+  +  +++S    +K+ +LL      S  D+K  +D+V  LQ +LI+KND+E E L + +A   Q  L++  Q ++ K+K LE T++ QE +I KME+ +E    +++K   L+                  P+  +  +   E+ S L  EN +LR E+D  ++ Q P +     + D     S++  L   L+ A+ RI++LE+Q+ ++ R W +EK+ + T L E
Sbjct:   28 YRRAMQKMAEDILSLRRQASILEGENRILRSRLAQQEEEEGQ--GKASEAQNTVS----MKQKLLL------SELDMKKLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAALLKQYQGKLQKMKALEETVRHQEKVIEKMERVLEDRLQDRSKPPPLNRQQGKPYTGFPMLSASGLPLGSMGENLPVELYSVLLAENAKLRTELDKNRHQQAPIILQQQALPDLLSGTSDKFNLLAKLEHAQSRILSLESQLEDSARRWGREKQDLATRLQE 289
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: CCDC33 (coiled-coil domain containing 33 [Source:HGNC Symbol;Acc:HGNC:26552])

HSP 1 Score: 85.1149 bits (209), Expect = 1.816e-17
Identity = 80/274 (29.20%), Postives = 141/274 (51.46%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDI-DSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK--NNKNKAGNLS------------------PIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ-PKLNNINKMSD-----SERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELDE 1506
            Y+ AM++M+ +IL LR Q   L   N +L+       +E     G+  +  +++S    +K+ +LL      S  D+K  +D+V  LQ +LI+KND+E E L + +A   Q  L++  Q ++ K+K LE T++ QE +I KME+ +E    +++K   L+                  P+  +  +   E+ S L  EN +LR E+D  ++ Q P +     + D     S++  L   L+ A+ RI++LE+Q+ ++ R W +EK+ + T L E
Sbjct:   28 YRRAMQKMAEDILSLRRQASILEGENRILRSRLAQQEEEEGQ--GKASEAQNTVS----MKQKLLL------SELDMKKLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAALLKQYQGKLQKMKALEETVRHQEKVIEKMERVLEDRLQDRSKPPPLNRQQGKPYTGFPMLSASGLPLGSMGENLPVELYSVLLAENAKLRTELDKNRHQQAPIILQQQALPDLLSGTSDKFNLLAKLEHAQSRILSLESQLEDSARRWGREKQDLATRLQE 289
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: CCDC33 (coiled-coil domain containing 33 [Source:HGNC Symbol;Acc:HGNC:26552])

HSP 1 Score: 85.1149 bits (209), Expect = 1.816e-17
Identity = 80/274 (29.20%), Postives = 141/274 (51.46%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDI-DSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK--NNKNKAGNLS------------------PIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ-PKLNNINKMSD-----SERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELDE 1506
            Y+ AM++M+ +IL LR Q   L   N +L+       +E     G+  +  +++S    +K+ +LL      S  D+K  +D+V  LQ +LI+KND+E E L + +A   Q  L++  Q ++ K+K LE T++ QE +I KME+ +E    +++K   L+                  P+  +  +   E+ S L  EN +LR E+D  ++ Q P +     + D     S++  L   L+ A+ RI++LE+Q+ ++ R W +EK+ + T L E
Sbjct:   28 YRRAMQKMAEDILSLRRQASILEGENRILRSRLAQQEEEEGQ--GKASEAQNTVS----MKQKLLL------SELDMKKLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAALLKQYQGKLQKMKALEETVRHQEKVIEKMERVLEDRLQDRSKPPPLNRQQGKPYTGFPMLSASGLPLGSMGENLPVELYSVLLAENAKLRTELDKNRHQQAPIILQQQALPDLLSGTSDKFNLLAKLEHAQSRILSLESQLEDSARRWGREKQDLATRLQE 289
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: CCDC33 (coiled-coil domain containing 33 [Source:HGNC Symbol;Acc:HGNC:26552])

HSP 1 Score: 85.5001 bits (210), Expect = 7.976e-17
Identity = 80/274 (29.20%), Postives = 141/274 (51.46%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDI-DSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK--NNKNKAGNLS------------------PIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ-PKLNNINKMSD-----SERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELDE 1506
            Y+ AM++M+ +IL LR Q   L   N +L+       +E     G+  +  +++S    +K+ +LL      S  D+K  +D+V  LQ +LI+KND+E E L + +A   Q  L++  Q ++ K+K LE T++ QE +I KME+ +E    +++K   L+                  P+  +  +   E+ S L  EN +LR E+D  ++ Q P +     + D     S++  L   L+ A+ RI++LE+Q+ ++ R W +EK+ + T L E
Sbjct:  435 YRRAMQKMAEDILSLRRQASILEGENRILRSRLAQQEEEEGQ--GKASEAQNTVS----MKQKLLL------SELDMKKLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAALLKQYQGKLQKMKALEETVRHQEKVIEKMERVLEDRLQDRSKPPPLNRQQGKPYTGFPMLSASGLPLGSMGENLPVELYSVLLAENAKLRTELDKNRHQQAPIILQQQALPDLLSGTSDKFNLLAKLEHAQSRILSLESQLEDSARRWGREKQDLATRLQE 696
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Match: ccdc33 (coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1])

HSP 1 Score: 108.997 bits (271), Expect = 2.787e-25
Identity = 87/261 (33.33%), Postives = 137/261 (52.49%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNK-NKAGNLSPIKEVLSSRE-----KEINSTLKDENTRLRHEIDMVKN-------NQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKK-ITELDEF 1509
            Y  A+ +M+ +++ LR QM+ L   NS L+     H      L  +  D+D ++  E+  +   L  K     S     +D++ +LQ +LIKKND E EF+++ +AH  Q  +++  Q R  KI  LE T++ QE +I KMEK ++ N K  + GN    K  +  ++     +EI S    EN+RLR E+D + N        QP  +     SDSE+LEL   L +AE +I  LE Q+  N + W KEK++ +T + E+
Sbjct:  132 YSAALHKMAEDMIGLRSQMRVLESENSDLRRELSLHQDLGRTLLDDT-DVDVMTNTEIADRIASLKFKLSSESSKASAMKDRIQQLQNELIKKNDIEKEFVQLQRAHQQQQAVLKRYQTRDKKITALEDTVRQQEKVIEKMEKLLDANLKERRKGNSEKKKAAMKQKDEEEKRREIESVFVAENSRLREELDRLCNLPPPIIIQQPAQSLYQPFSDSEKLELLTQLARAEGQIQTLEQQLKENAKLWGKEKQEMLTRVSEY 391
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Match: ccdc33 (coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1])

HSP 1 Score: 100.523 bits (249), Expect = 1.687e-22
Identity = 80/242 (33.06%), Postives = 125/242 (51.65%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNK-NKAGNLSPIKEVLSSRE-----KEINSTLKDENTRLRHEIDMVKN-------NQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSN 1455
            Y  A+ +M+ +++ LR QM+ L   NS L+      H++      +  D+D ++  E+  +   L  K     S     +D++ +LQ +LIKKND E EF+++ +AH  Q  +++  Q R  KI  LE T++ QE +I KMEK ++ N K  + GN    K  +  ++     +EI S    EN+RLR E+D + N        QP  +     SDSE+LEL   L +AE +I  LE QV  
Sbjct:  150 YSAALHKMAEDMIGLRSQMRVLESENSDLR-RELSLHQDLGRTLLDDTDVDVMTNTEIADRIASLKFKLSSESSKASAMKDRIQQLQNELIKKNDIEKEFVQLQRAHQQQQAVLKRYQTRDKKITALEDTVRQQEKVIEKMEKLLDANLKERRKGNSEKKKAAMKQKDEEEKRREIESVFVAENSRLREELDRLCNLPPPIIIQQPAQSLYQPFSDSEKLELLTQLARAEGQIQTLEQQVCG 390
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Match: ccdc33 (coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1])

HSP 1 Score: 58.9214 bits (141), Expect = 4.043e-9
Identity = 45/150 (30.00%), Postives = 75/150 (50.00%), Query Frame = 1 
Query:  733 EAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELII 1182
            E  E      + Y  A+ +M+ +++ LR QM+ L   NS L+     H      L  +  D+D ++  E+  +   L  K     S     +D++ +LQ +LIKKND E EF+++ +AH  Q  +++  Q R  KI  LE T++ QE + 
Sbjct:  107 EVSEHQTKELENYSAALHKMAEDMIGLRSQMRVLESENSDLRRELSLHQDLGRTLLDDT-DVDVMTNTEIADRIASLKFKLSSESSKASAMKDRIQQLQNELIKKNDIEKEFVQLQRAHQQQQAVLKRYQTRDKKITALEDTVRQQEKVF 255
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: emp2 (epithelial membrane protein 2 [Source:Xenbase;Acc:XB-GENE-957163])

HSP 1 Score: 131.724 bits (330), Expect = 1.756e-33
Identity = 99/343 (28.86%), Postives = 178/343 (51.90%), Query Frame = 1 
Query:  595 YYRPYTTDLQNDDKS---NNSFREDLLP-EYQYIFES-----DKESLVIEP-------------DFQPEAVEENGPSA-DRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSR---EKEINSTLKDENTRLRHEIDMVK----NNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELD--EFGLSKI 1524
            +YRPY++ LQ D  S   +N+   D+LP  + +  +      D    + +P             +  P+ V  +       Y+LAM+RM+ +I+ LR QM  L   NS L+     H      L  +  DID ++K E+  + + L  K     SDL+  +D+V +LQ +L++KND+E E + + +AH  Q  ++    +R+ + K L+ T++ QE +I KMEK +++  K+   N +  +E    +   + ++++ L  EN+RLR E+D  +      QP++  ++  SDSE+  L   L+K++ R+ +LE ++  + R W +EK++  T+L   E G S+ 
Sbjct:    4 FYRPYSSSLQKDGLSLPPHNAL-ADILPNPWSHSMQGQQKHMDHSGPLNKPHANHQQQKQSNEMELPPDPVAAHQEQELSNYRLAMQRMADDIIALRRQMSGLEAENSNLRSELSLHQDIGRNLLSD-TDIDVMTKAEIADRMVTLKHKLASETSDLRVMRDRVQQLQNELVRKNDREKELVLLQRAHQQQQAVLNQYHQRLARSKALQDTMRKQEKVIEKMEKLLDRKLKDGKRNRADGEERGGRQDTLQADVHAALLAENSRLREELDRTRVPMITQQPRI--LDTFSDSEKFSLLSKLEKSQARVQSLERELEESARRWGREKQQFKTQLSEQEMGFSRT 342
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: emp2 (epithelial membrane protein 2 [Source:Xenbase;Acc:XB-GENE-957163])

HSP 1 Score: 129.413 bits (324), Expect = 1.314e-32
Identity = 83/262 (31.68%), Postives = 148/262 (56.49%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSR---EKEINSTLKDENTRLRHEIDMVK----NNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELD--EFGLSKI 1524
            Y+LAM+RM+ +I+ LR QM  L   NS L+     H      L  +  DID ++K E+  + + L  K     SDL+  +D+V +LQ +L++KND+E E + + +AH  Q  ++    +R+ + K L+ T++ QE +I KMEK +++  K+   N +  +E    +   + ++++ L  EN+RLR E+D  +      QP++  ++  SDSE+  L   L+K++ R+ +LE ++  + R W +EK++  T+L   E G S+ 
Sbjct:   82 YRLAMQRMADDIIALRRQMSGLEAENSNLRSELSLHQDIGRNLLSDT-DIDVMTKAEIADRMVTLKHKLASETSDLRVMRDRVQQLQNELVRKNDREKELVLLQRAHQQQQAVLNQYHQRLARSKALQDTMRKQEKVIEKMEKLLDRKLKDGKRNRADGEERGGRQDTLQADVHAALLAENSRLREELDRTRVPMITQQPRI--LDTFSDSEKFSLLSKLEKSQARVQSLERELEESARRWGREKQQFKTQLSEQEMGFSRT 340
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: emp2 (epithelial membrane protein 2 [Source:Xenbase;Acc:XB-GENE-957163])

HSP 1 Score: 129.028 bits (323), Expect = 1.577e-32
Identity = 83/262 (31.68%), Postives = 148/262 (56.49%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSR---EKEINSTLKDENTRLRHEIDMVK----NNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELD--EFGLSKI 1524
            Y+LAM+RM+ +I+ LR QM  L   NS L+     H      L  +  DID ++K E+  + + L  K     SDL+  +D+V +LQ +L++KND+E E + + +AH  Q  ++    +R+ + K L+ T++ QE +I KMEK +++  K+   N +  +E    +   + ++++ L  EN+RLR E+D  +      QP++  ++  SDSE+  L   L+K++ R+ +LE ++  + R W +EK++  T+L   E G S+ 
Sbjct:   82 YRLAMQRMADDIIALRRQMSGLEAENSNLRSELSLHQDIGRNLLSDT-DIDVMTKAEIADRMVTLKHKLASETSDLRVMRDRVQQLQNELVRKNDREKELVLLQRAHQQQQAVLNQYHQRLARSKALQDTMRKQEKVIEKMEKLLDRKLKDGKRNRADGEERGGRQDTLQADVHAALLAENSRLREELDRTRVPMITQQPRI--LDTFSDSEKFSLLSKLEKSQARVQSLERELEESARRWGREKQQFKTQLSEQEMGFSRT 340
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: emp2 (epithelial membrane protein 2 [Source:Xenbase;Acc:XB-GENE-957163])

HSP 1 Score: 128.642 bits (322), Expect = 7.758e-31
Identity = 83/261 (31.80%), Postives = 148/261 (56.70%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSR---EKEINSTLKDENTRLRHEIDMVK----NNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELD--EFGLSK 1521
            Y+LAM+RM+ +I+ LR QM  L   NS L+     H      L  +  DID ++K E+  + + L  K     SDL+  +D+V +LQ +L++KND+E E + + +AH  Q  ++    +R+ + K L+ T++ QE +I KMEK +++  K+   N +  +E    +   + ++++ L  EN+RLR E+D  +      QP++  ++  SDSE+  L   L+K++ R+ +LE ++  + R W +EK++  T+L   E G S+
Sbjct:  708 YRLAMQRMADDIIALRRQMSGLEAENSNLRSELSLHQDIGRNLLSDT-DIDVMTKAEIADRMVTLKHKLASETSDLRVMRDRVQQLQNELVRKNDREKELVLLQRAHQQQQAVLNQYHQRLARSKALQDTMRKQEKVIEKMEKLLDRKLKDGKRNRADGEERGGRQDTLQADVHAALLAENSRLREELDRTRVPMITQQPRI--LDTFSDSEKFSLLSKLEKSQARVQSLERELEESARRWGREKQQFKTQLSEQEMGFSR 965
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: emp2 (epithelial membrane protein 2 [Source:Xenbase;Acc:XB-GENE-957163])

HSP 1 Score: 128.257 bits (321), Expect = 1.164e-30
Identity = 83/261 (31.80%), Postives = 148/261 (56.70%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSR---EKEINSTLKDENTRLRHEIDMVK----NNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELD--EFGLSK 1521
            Y+LAM+RM+ +I+ LR QM  L   NS L+     H      L  +  DID ++K E+  + + L  K     SDL+  +D+V +LQ +L++KND+E E + + +AH  Q  ++    +R+ + K L+ T++ QE +I KMEK +++  K+   N +  +E    +   + ++++ L  EN+RLR E+D  +      QP++  ++  SDSE+  L   L+K++ R+ +LE ++  + R W +EK++  T+L   E G S+
Sbjct:  700 YRLAMQRMADDIIALRRQMSGLEAENSNLRSELSLHQDIGRNLLSDT-DIDVMTKAEIADRMVTLKHKLASETSDLRVMRDRVQQLQNELVRKNDREKELVLLQRAHQQQQAVLNQYHQRLARSKALQDTMRKQEKVIEKMEKLLDRKLKDGKRNRADGEERGGRQDTLQADVHAALLAENSRLREELDRTRVPMITQQPRI--LDTFSDSEKFSLLSKLEKSQARVQSLERELEESARRWGREKQQFKTQLSEQEMGFSR 957
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Match: Ccdc33 (coiled-coil domain containing 33 [Source:MGI Symbol;Acc:MGI:1922464])

HSP 1 Score: 85.5001 bits (210), Expect = 5.340e-17
Identity = 87/286 (30.42%), Postives = 148/286 (51.75%), Query Frame = 1 
Query:  721 DFQPEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEE---LIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK----------NNKNKAG-------NLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ---PKLNNINKMSD-----SERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKIT 1494
            + QP  VE N      Y+ AM++M+ +IL L++Q   L E N +L+          S L  + ++  S ++EE    +K+ +LL+        D+K  +D+V  LQ +LI+KND+E E L + +A   Q   ++  Q ++ K+K LE T++ QE +I KME+ +E+          +N+ +          L P+ E L+    ++ S L  ENTRLR E++  KN Q   P +     + D     S++  L   L++A+ RI++LENQ+  + R W +EK+ + 
Sbjct:  408 ELQPRDVEMNN-----YRRAMQKMAEDILALKKQANILEEENGMLR----------SHLSQQSIEEQSRAEEENLVSMKQKLLLNEL------DMKRLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAAQLRRYQDKLQKMKALEDTVRHQEKVIEKMEQILEERLCERKEPIPSNRPQGKPIMASGIPLGPVGETLAV---DLYSMLLAENTRLRTELE--KNRQQSAPIILQQQALPDFLGGTSDKFNLLAKLEQAQSRILSLENQLEESARHWAREKQNLA 667
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Match: Ccdc33 (coiled-coil domain containing 33 [Source:MGI Symbol;Acc:MGI:1922464])

HSP 1 Score: 84.7297 bits (208), Expect = 7.407e-17
Identity = 87/287 (30.31%), Postives = 148/287 (51.57%), Query Frame = 1 
Query:  721 DFQPEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEE----LIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK----------NNKNKAG-------NLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ---PKLNNINKMSD-----SERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKIT 1494
            + QP  VE N      Y+ AM++M+ +IL L++Q   L E N +L+          S L  + ++  S ++EE     +K+ +LL+        D+K  +D+V  LQ +LI+KND+E E L + +A   Q   ++  Q ++ K+K LE T++ QE +I KME+ +E+          +N+ +          L P+ E L+    ++ S L  ENTRLR E++  KN Q   P +     + D     S++  L   L++A+ RI++LENQ+  + R W +EK+ + 
Sbjct:  408 ELQPRDVEMNN-----YRRAMQKMAEDILALKKQANILEEENGMLR----------SHLSQQSIEEQSRAEEENLAVSMKQKLLLNEL------DMKRLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAAQLRRYQDKLQKMKALEDTVRHQEKVIEKMEQILEERLCERKEPIPSNRPQGKPIMASGIPLGPVGETLAV---DLYSMLLAENTRLRTELE--KNRQQSAPIILQQQALPDFLGGTSDKFNLLAKLEQAQSRILSLENQLEESARHWAREKQNLA 668
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Match: Ccdc33 (coiled-coil domain containing 33 [Source:MGI Symbol;Acc:MGI:1922464])

HSP 1 Score: 75.0998 bits (183), Expect = 1.031e-13
Identity = 86/319 (26.96%), Postives = 144/319 (45.14%), Query Frame = 1 
Query:  721 DFQPEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEE----LIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK----------NNKNKAG-------NLSPIKEVLSSREKEINSTLKDENTRLRHEI-----------------------------------DMVKNNQPKLNNINKMSD-----SERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKIT 1494
            + QP  VE N      Y+ AM++M+ +IL L++Q   L E N +L+          S L  + ++  S ++EE     +K+ +LL+        D+K  +D+V  LQ +LI+KND+E E L + +A   Q   ++  Q ++ K+K LE T++ QE +I KME+ +E+          +N+ +          L P+ E L+    ++ S L  ENTRLR E+                                   D      PK        D     S++  L   L++A+ RI++LENQ+  + R W +EK+ + 
Sbjct:  593 ELQPRDVEMN-----NYRRAMQKMAEDILALKKQANILEEENGMLR----------SHLSQQSIEEQSRAEEENLAVSMKQKLLLNEL------DMKRLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAAQLRRYQDKLQKMKALEDTVRHQEKVIEKMEQILEERLCERKEPIPSNRPQGKPIMASGIPLGPVGETLAV---DLYSMLLAENTRLRTELEKNRQQSAPIILQQQALPVDPRELGAGGDLAERLQDTNGPGHPKSTETLPAQDFLGGTSDKFNLLAKLEQAQSRILSLENQLEESARHWAREKQNLA 887
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Match: Ccdc33 (coiled-coil domain containing 33 [Source:MGI Symbol;Acc:MGI:1922464])

HSP 1 Score: 66.6254 bits (161), Expect = 4.459e-11
Identity = 71/229 (31.00%), Postives = 118/229 (51.53%), Query Frame = 1 
Query:  721 DFQPEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEE----LIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK----------NNKNKAG-------NLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ 1344
            + QP  VE N      Y+ AM++M+ +IL L++Q   L E N +L+          S L  + ++  S ++EE     +K+ +LL+        D+K  +D+V  LQ +LI+KND+E E L + +A   Q   ++  Q ++ K+K LE T++ QE +I KME+ +E+          +N+ +          L P+ E L+    ++ S L  ENTRLR E++  KN Q
Sbjct:  593 ELQPRDVEMN-----NYRRAMQKMAEDILALKKQANILEEENGMLR----------SHLSQQSIEEQSRAEEENLAVSMKQKLLLNEL------DMKRLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAAQLRRYQDKLQKMKALEDTVRHQEKVIEKMEQILEERLCERKEPIPSNRPQGKPIMASGIPLGPVGETLAV---DLYSMLLAENTRLRTELE--KNRQ 795
[Close]
BLAST of C2H2-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q8N5R6|CCD33_HUMAN (Coiled-coil domain-containing protein 33 OS=Homo sapiens OX=9606 GN=CCDC33 PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 3.642e-16
Identity = 80/274 (29.20%), Postives = 141/274 (51.46%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDI-DSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK--NNKNKAGNLS------------------PIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ-PKLNNINKMSD-----SERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELDE 1506
            Y+ AM++M+ +IL LR Q   L   N +L+       +E     G+  +  +++S    +K+ +LL      S  D+K  +D+V  LQ +LI+KND+E E L + +A   Q  L++  Q ++ K+K LE T++ QE +I KME+ +E    +++K   L+                  P+  +  +   E+ S L  EN +LR E+D  ++ Q P +     + D     S++  L   L+ A+ RI++LE+Q+ ++ R W +EK+ + T L E
Sbjct:  638 YRRAMQKMAEDILSLRRQASILEGENRILRSRLAQQEEEEGQ--GKASEAQNTVS----MKQKLLL------SELDMKKLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAALLKQYQGKLQKMKALEETVRHQEKVIEKMERVLEDRLQDRSKPPPLNRQQGKPYTGFPMLSASGLPLGSMGENLPVELYSVLLAENAKLRTELDKNRHQQAPIILQQQALPDLLSGTSDKFNLLAKLEHAQSRILSLESQLEDSARRWGREKQDLATRLQE 899
[Close]
BLAST of C2H2-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q5XIR4|CCD33_RAT (Coiled-coil domain-containing protein 33 OS=Rattus norvegicus OX=10116 GN=Ccdc33 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.722e-10
Identity = 86/326 (26.38%), Postives = 146/326 (44.79%), Query Frame = 1 
Query:  721 DFQPEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDID---SISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK----------NNKNKAGNLSPIKEVLSSREKEIN-------------STLKDENTRLRHEIDMVKNNQ---P-----------------------KLNNINK----------------MSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKIT 1494
            + QP  VE N      Y+ AM++M+ +IL LR+Q   L E N +L+     H  + S+   +    +   ++S    +K+ +LL+        D+K  +D+V  LQ +LI+KND+E E L + +A   Q   ++  Q ++ K+K LE T++ QE +I KME+ +E+          +N+ +     PI +  + +   I              S L  ENTRLR E++  KN Q   P                       +L + N                    S++  L   L++A+ RI++LENQ+  + R W +EK+ + 
Sbjct:  408 ELQPRDVEMNN-----YRRAMQKMAEDILALRKQANILEEENRMLRS----HLTQQSIEEEQNRAEEENLAVS----MKQRLLLNEL------DMKRLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAAQLRRYQDKLQKMKGLEDTVRHQEKVIEKMEQILEERLHERKEPAPSNRPQG---KPIMDAFAPQASGIPLGPAGENLAMDLYSMLLAENTRLRTELE--KNRQQSAPIILQQQALPVDPGELGAGGDLAERLQDTNGPGHSKYTETMPAQDFLGGTSDKFSLLAKLEQAQSRILSLENQLEESARHWAREKQNLA 709
[Close]
BLAST of C2H2-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q3ULW6|CCD33_MOUSE (Coiled-coil domain-containing protein 33 OS=Mus musculus OX=10090 GN=Ccdc33 PE=2 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 5.573e-10
Identity = 71/229 (31.00%), Postives = 118/229 (51.53%), Query Frame = 1 
Query:  721 DFQPEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEE----LIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEK----------NNKNKAG-------NLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ 1344
            + QP  VE N      Y+ AM++M+ +IL L++Q   L E N +L+          S L  + ++  S ++EE     +K+ +LL+        D+K  +D+V  LQ +LI+KND+E E L + +A   Q   ++  Q ++ K+K LE T++ QE +I KME+ +E+          +N+ +          L P+ E L+    ++ S L  ENTRLR E++  KN Q
Sbjct:  593 ELQPRDVEMN-----NYRRAMQKMAEDILALKKQANILEEENGMLR----------SHLSQQSIEEQSRAEEENLAVSMKQKLLLNEL------DMKRLRDRVQHLQNELIRKNDREKELLLLYQAQQPQAAQLRRYQDKLQKMKALEDTVRHQEKVIEKMEQILEERLCERKEPIPSNRPQGKPIMASGIPLGPMGETLAV---DLYSMLLAENTRLRTELE--KNRQ 795
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A1I8GXG0 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.173e-42
Identity = 105/319 (32.92%), Postives = 174/319 (54.55%), Query Frame = 1 
Query:  583 MATLYYRPYTTD-LQNDDKSNNSFREDLLPEYQYIFESDK--------ESLVIEPDFQ----PEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKN-DQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKITE 1497
            MATLYYRPYT++ + + D    +  E +LPEY YIF + +         +   +P  Q    PEA  E G   +RY+ AMR+M  +IL L+++++ L   N+ L+ +   +     +L G+  D + + K +LI +Y  + +K   + S +  Y++KV +LQ +LI++  D       +  AH+SQ  LIQ LQ +  K++ LE     QE +I +ME  +  +   K+ +              I+  L +EN RLR E+  ++++         M D+ER+ELYQLLD+AE RI +LE QV++  +DW +EK+++T+
Sbjct:    1 MATLYYRPYTSEPITDGDLPAENAVESVLPEYDYIFPASRPRHQPGAASTGRRQPQRQLAPLPEASAELG-ELERYRDAMRKMGQDILALQDRIRELEMENAALKRDVGQYGDTQQLLAGDGGDFEDLPKADLIARYAAMKNKLMSTASQVGQYREKVQQLQNELIRQQQDSGRGGTGVGPAHASQQRLIQQLQAKADKVRQLEGACMKQEQVIERMEALLNDSGGKKSNDT-------------ISRALAEENRRLREELSQMRSSARGDGADVGMDDAERMELYQLLDRAETRIASLEKQVADKAKDWAREKERLTD 305
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A1I8I8P2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.173e-42
Identity = 105/319 (32.92%), Postives = 174/319 (54.55%), Query Frame = 1 
Query:  583 MATLYYRPYTTD-LQNDDKSNNSFREDLLPEYQYIFESDK--------ESLVIEPDFQ----PEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKN-DQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKITE 1497
            MATLYYRPYT++ + + D    +  E +LPEY YIF + +         +   +P  Q    PEA  E G   +RY+ AMR+M  +IL L+++++ L   N+ L+ +   +     +L G+  D + + K +LI +Y  + +K   + S +  Y++KV +LQ +LI++  D       +  AH+SQ  LIQ LQ +  K++ LE     QE +I +ME  +  +   K+ +              I+  L +EN RLR E+  ++++         M D+ER+ELYQLLD+AE RI +LE QV++  +DW +EK+++T+
Sbjct:    1 MATLYYRPYTSEPITDGDLPAENAVESVLPEYDYIFPASRPRHQPGAASTGRRQPQRQLAPLPEASAELG-ELERYRDAMRKMGQDILALQDRIRELEMENAALKRDVGQYGDTQQLLAGDGGDFEDLPKADLIARYAAMKNKLMSTASQVGQYREKVQQLQNELIRQQQDSGRGGTGVGPAHASQQRLIQQLQAKADKVRQLEGACMKQEQVIERMEALLNDSGGKKSNDT-------------ISRALAEENRRLREELSQMRSSARGDGADVGMDDAERMELYQLLDRAETRIASLEKQVADKAKDWAREKERLTD 305
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A0B7AS32 (Uncharacterized protein OS=Arion vulgaris OX=1028688 GN=ORF133553 PE=4 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.949e-42
Identity = 114/338 (33.73%), Postives = 180/338 (53.25%), Query Frame = 1 
Query:  583 MATLYYRPYTTD-LQNDDKSNNSFREDLLPEYQYIFESDKESLV--------------IEP-----------DFQPEAVEENGPSA--------DRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKIT 1494
            MATLYYRPYT++ ++  +       E +LPEYQYIF    +                 I P             +P  +++   S         D Y+ A+++M  +IL LR Q+++L   NS L+ +   H+ +   L  +  D+DS+++ EL  +Y  L  K     +DLK Y+ +V KLQ +LIKKND+E ++L+M+ AHSSQ  L++ LQ ++ K++ LE T K QE +I K+E  + K      G     ++   +   E N  L +EN RLR ++D +K +Q     +    D E+LELYQ L++AE RIM+LE Q+  N R+W +E+  ++
Sbjct:    1 MATLYYRPYTSEPIKEGELPTFDAVESILPEYQYIFVDPNQDTARSNKSKPPPPPSRHINPADRLAYTQTAATREPLDLDQTHMSVLDHQMHDLDNYRTAVQKMGHDILSLRTQVRTLEGENSKLRID-VNHYDDNKKLLIDAADLDSLARPELQARYASLRQKLAAQTTDLKDYKTRVQKLQNELIKKNDKEKDYLRMSHAHSSQQELLKRLQDKVQKVRKLEETCKKQEKVIEKLEAVLYKIKDKSVG-----QKGAGNAMSEANEVLAEENKRLREQMDDMK-DQLLRAGMAGGEDLEKLELYQALERAEGRIMSLEKQLQENARNWGRERADMS 331
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A1I8HL45 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig011302g1 PE=4 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 5.971e-42
Identity = 106/320 (33.12%), Postives = 177/320 (55.31%), Query Frame = 1 
Query:  583 MATLYYRPYTTD-LQNDDKSNNSFREDLLPEYQYIFESDK--------ESLVIEPDFQ----PEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETS-VLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKN-DQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKITE 1497
            MATLYYRPYT++ + + D    +  E +LPEY YIF + +         +   +P  Q    PEA  E G   +RY+ AMR+M  +IL L+++++ L   N+ L+ +  G + +T  +L G+  + + + K +LI +Y  + +K   + S +  Y++KV +LQ +LI++  D       +  AH+SQ  LIQ LQ +  K++ LE     QE +I +ME  +  +   K+ +              I+  L +EN RLR E+  ++++         M D+ER+ELYQLLD+AE RI +LE QV++  +DW +EK+++T+
Sbjct:    1 MATLYYRPYTSEPITDGDLPAENAVESVLPEYDYIFPASRPRHQPGAASTGRRQPQRQLAPLPEASAELG-ELERYRDAMRKMGQDILALQDRIRELEMENAALKRD-VGQYGDTQQLLAGDGGEFEDLPKADLIARYAAMKNKLMSTASQVGQYREKVQQLQNELIRQQQDSGRGGTGVGPAHASQQRLIQQLQAKADKVRQLEGACMKQEQVIERMEALLNDSGGKKSNDT-------------ISRALAEENRRLREELSQMRSSARGDGADVGMDDAERMELYQLLDRAETRIASLEKQVADKAKDWAREKERLTD 305
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A267ECT2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig026285g3 PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.526e-40
Identity = 114/336 (33.93%), Postives = 173/336 (51.49%), Query Frame = 1 
Query:  583 MATLYYRPYTTDLQNDD------KSNNSFREDLLPEYQYIFESDKESLV-------------IEPDFQPEAVEENGPS-----------ADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLSPIKEVLSSREKEINS-TLKDENTRLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKITE 1497
            MATLYYRPYT+D   D        S+       L +Y YIF S   S               +     P+ +  NGP             ++Y+ A+R+M  +IL LR++++ L   NS L+ +  G + + S +  + V++D I + EL+ +Y  L      S + L+ Y+DKVH+LQ +LI  N   A   ++  AH SQ  L+Q LQ+R+ K + LE     QE +I KME+ + ++ ++ AG           R++E  +  L +EN +LR E+  VK +Q +    N M  SERLELYQLLDKAE RI +LE Q+    R  ++EK ++ E
Sbjct:    1 MATLYYRPYTSDPITDGDLPEEVGSSTPLPAGALADYDYIFPSGPASTARRPPGGAAAAAAPLSNSLVPK-LHNNGPDYIAQLDGQLGEIEKYRDALRKMGQDILSLRDRVRELEMENSALRRD-LGSYSDASKILQDSVELDGIPRAELMARYAALRQNLRGSVAQLQQYKDKVHRLQNELIAGNQSAAGMERLAGAHESQQRLLQRLQERVAKQRSLEEACAKQEKVIEKMERLL-RDKRSGAG-----------RDEEAKAKALMEENRKLRDEMTAVKASQQQRR--NGMESSERLELYQLLDKAETRIASLEKQIDAAARKQKREKARLLE 320
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Match: ccdc33 (coiled-coil domain containing 33 [Source:NCBI gene;Acc:103021518])

HSP 1 Score: 114.39 bits (285), Expect = 2.674e-27
Identity = 87/255 (34.12%), Postives = 136/255 (53.33%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIE-------KNNKNKAGNLSPIKEVLSSREKEINSTLKDENT-------RLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI 1491
            Y+ AM +M+ +IL LR Q+ SL   NS L+ +    H++      +  DID ++K E+  + + L +K     S     ++K+ +LQ +LI+KND E E + + +AH  Q  ++Q  Q RI K  +LE T++ QE II +MEK ++       K N  +   +   KE  +S+ +EI S L  EN+       RLRH+   V   QP +      SDSE+L L   L++AE  I  LE Q+  N R W +EK+++
Sbjct:  104 YRTAMCKMAEDILALRSQVTSLEAENSQLR-SELSQHQDLGWTLLDDTDIDIMTKTEITDRIVSLKAKLASESSKTAEQREKIQRLQNELIRKNDSEKELVLLKQAHQQQQAVLQRYQGRIKKCAVLENTVRQQEKIIEQMEKLLDTKLRERNKENTERKKAVYKRKEEDASKRREIESVLSAENSRLREELERLRHQPPAVIIQQP-VQTEQPFSDSEKLRLLGQLERAEAYIHTLEKQLEENARLWGREKQEM 356
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Match: ccdc33 (coiled-coil domain containing 33 [Source:NCBI gene;Acc:103021518])

HSP 1 Score: 114.005 bits (284), Expect = 4.315e-27
Identity = 87/255 (34.12%), Postives = 136/255 (53.33%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIE-------KNNKNKAGNLSPIKEVLSSREKEINSTLKDENT-------RLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI 1491
            Y+ AM +M+ +IL LR Q+ SL   NS L+ +    H++      +  DID ++K E+  + + L +K     S     ++K+ +LQ +LI+KND E E + + +AH  Q  ++Q  Q RI K  +LE T++ QE II +MEK ++       K N  +   +   KE  +S+ +EI S L  EN+       RLRH+   V   QP +      SDSE+L L   L++AE  I  LE Q+  N R W +EK+++
Sbjct:  104 YRTAMCKMAEDILALRSQVTSLEAENSQLR-SELSQHQDLGWTLLDDTDIDIMTKTEITDRIVSLKAKLASESSKTAEQREKIQRLQNELIRKNDSEKELVLLKQAHQQQQAVLQRYQGRIKKCAVLENTVRQQEKIIEQMEKLLDTKLRERNKENTERKKAVYKRKEEDASKRREIESVLSAENSRLREELERLRHQPPAVIIQQP-VQTEQPFSDSEKLRLLGQLERAEAYIHTLEKQLEENARLWGREKQEM 356
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BLAST of C2H2-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ccdc33 (coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1])

HSP 1 Score: 115.546 bits (288), Expect = 4.823e-29
Identity = 75/253 (29.64%), Postives = 134/253 (52.96%), Query Frame = 1 
Query:  763 DRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNNKNKAGNLS----PIKEVLSSRE--KEINSTLKDENTRLRHEIDMVK------NNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKK 1485
            D Y+  +R+M+ +IL LR ++  L   NS L+     H +    L  +  D+D ++K EL  + + L  K      D+K Y+DKV +LQ +LI+KN++E E L++ + H  Q   +   Q+R+ ++K LE TI+ QE ++ KME+ +E+  + KA   S    P K      +  K++   L  EN RLR E++ ++        Q     ++  S +E++ L   +++AE R+  LE ++    + W +E++
Sbjct:   11 DGYRSVLRKMADDILALRREVGRLESENSRLRSEMSLHREAGRALLADA-DLDVMTKSELADRLVSLKQKVAMDTRDMKGYKDKVQQLQNELIRKNEREHELLQLRRVHQQQQAALHKCQERVAQVKRLEETIRQQEKVMEKMERLLERQARQKATKRSESDTPTKGGKCDGDLLKDVELVLGVENARLRMELERLRAQPHPHTQQRPPQCLDAFSVAEKMALLAKVERAEGRVRQLEEELKVKAKKWGRERQ 262
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Sea Lamprey
Match: CCDC33 (coiled-coil domain containing 33 [Source:HGNC Symbol;Acc:HGNC:26552])

HSP 1 Score: 97.8265 bits (242), Expect = 1.136e-21
Identity = 79/270 (29.26%), Postives = 133/270 (49.26%), Query Frame = 1 
Query:  769 YKLAMRRMSTEILYLR-EQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKN----------NKNKAGNL---------SPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQ--PKLNN-------INKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI 1491
            Y++ MRRM+ +IL LR E M+  +E++ L +  S   H++   L       D   K++L  + +            L++Y++KV KLQ +LI K D+E E +++  AH  Q  ++   Q+R  +   LE T++ QE +I KMEK +E++          NK+  GN+          P         +++   L  EN RLRHE++M++     P ++        +    D E+L L   L++AE R  +LE Q+  N R W +EK+ +
Sbjct:  618 YRVGMRRMAEDILSLRNEVMRLEIEKSELRRQMSL--HRDAGRLLLSDGQFDVELKQKLASETV-----------TLRSYKEKVQKLQNELIWKADREKELVRLQLAHRQQQAVLLRYQERAARPARLEDTVRQQEKVIEKMEKLLERSVASNSNGKTENKSHKGNVFFTFYAKLWRPPGNEGERTTRDMQLVLLVENARLRHELEMIRAADVIPTIHMVMMSTILVEPFHDQEKLGLLARLERAEGRTHSLEEQIQENARRWGQEKQDL 874
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Nematostella
Match: EDO40023 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S894])

HSP 1 Score: 61.6178 bits (148), Expect = 1.174e-10
Identity = 64/227 (28.19%), Postives = 93/227 (40.97%), Query Frame = 1 
Query: 1042 KKNDQEAEFLKMNKAHSSQNVLIQNLQ----------------------------------------------KRIGKIKLLEVTIKDQELIIAKMEK-------QIEKNNKNKAGNLSPIKEVLSSREKEINSTLKDENTRLRHEI----DMVKNNQPK---------LNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKI-TELDEFGLSK 1521
            +KN++E E +K+ +AH SQ +L+Q LQ                                               ++ K K L+ T K QE   AK++         +EK   N +G+LS               TL DENTRLR E+     ++K  +           L +   M D ERL L   L+KAE RI+ LE Q++ + R W KEK  +   L+E  LS+
Sbjct:   19 QKNEKEKELIKLQEAHESQQILLQKLQTCAKLDILVVIALFAVEKCVPNSSGHLSQTLIDENTRLREELVRHKSKVQKYKTLQETCKKQEKTCAKLDILVVIALFAVEKCVPNSSGHLS--------------QTLIDENTRLREELVRHKGLLKEAESMQASTRESTLLLSGAGMGDEERLGLLHKLEKAEGRILGLEKQMTESARKWAKEKADLQMRLNELTLSQ 231
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000006932.1 (SMESG000006932.1)

HSP 1 Score: 513.842 bits (1322), Expect = 0.000e+0
Identity = 265/295 (89.83%), Postives = 273/295 (92.54%), Query Frame = 1 
Query:  688 ESDKESLVI--EPDFQPEAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKN--------------NKNKAGNLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKITELDEFGLSKI 1524
            +S  +S+V   + D +PEAVEEN PSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEV+DIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKN              +KNKAGNLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKITELDEFGLSK+
Sbjct:   25 QSSHDSMVYRDKADDKPEAVEENEPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHKETSVLFGEVMDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQIDLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELIIAKMEKQIEKNSVFYINLYKETYILDKNKAGNLSPIKEVLSSREKEINSTLKDENTRLRHEIDMVKNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEKKKITELDEFGLSKV 319
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000006935.1 (SMESG000006935.1)

HSP 1 Score: 108.227 bits (269), Expect = 1.428e-28
Identity = 52/60 (86.67%), Postives = 54/60 (90.00%), Query Frame = 1 
Query:  583 MATLYYRPYTTDLQNDDKSNNSFREDLLPEYQYIFESDKESLVIEPDFQPEAVE--ENGP 756
            MATLYYRPYTTDLQNDDKSNNSFREDLLPEYQYIFESDKESLVIEPDFQ   +E  + GP
Sbjct:    1 MATLYYRPYTTDLQNDDKSNNSFREDLLPEYQYIFESDKESLVIEPDFQRTVLELLQTGP 60
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000027399.1 (SMESG000027399.1)

HSP 1 Score: 51.9878 bits (123), Expect = 6.933e-7
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 2 
Query:  326 PLSPHQNVHGDIFAVFHLNCLQ 391
            PLSPHQNVHGDIFAVFHLNCLQ
Sbjct:  473 PLSPHQNVHGDIFAVFHLNCLQ 494
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000027399.1 (SMESG000027399.1)

HSP 1 Score: 51.9878 bits (123), Expect = 7.356e-7
Identity = 22/22 (100.00%), Postives = 22/22 (100.00%), Query Frame = 2 
Query:  326 PLSPHQNVHGDIFAVFHLNCLQ 391
            PLSPHQNVHGDIFAVFHLNCLQ
Sbjct:  465 PLSPHQNVHGDIFAVFHLNCLQ 486
The following BLAST results are available for this feature:
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CCDC331.816e-1729.20coiled-coil domain containing 33 [Source:HGNC Symb... [more]
CCDC331.816e-1729.20coiled-coil domain containing 33 [Source:HGNC Symb... [more]
CCDC331.816e-1729.20coiled-coil domain containing 33 [Source:HGNC Symb... [more]
CCDC331.816e-1729.20coiled-coil domain containing 33 [Source:HGNC Symb... [more]
CCDC337.976e-1729.20coiled-coil domain containing 33 [Source:HGNC Symb... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ccdc332.787e-2533.33coiled-coil domain containing 33 [Source:ZFIN;Acc:... [more]
ccdc331.687e-2233.06coiled-coil domain containing 33 [Source:ZFIN;Acc:... [more]
ccdc334.043e-930.00coiled-coil domain containing 33 [Source:ZFIN;Acc:... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
emp21.756e-3328.86epithelial membrane protein 2 [Source:Xenbase;Acc:... [more]
emp21.314e-3231.68epithelial membrane protein 2 [Source:Xenbase;Acc:... [more]
emp21.577e-3231.68epithelial membrane protein 2 [Source:Xenbase;Acc:... [more]
emp27.758e-3131.80epithelial membrane protein 2 [Source:Xenbase;Acc:... [more]
emp21.164e-3031.80epithelial membrane protein 2 [Source:Xenbase;Acc:... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Ccdc335.340e-1730.42coiled-coil domain containing 33 [Source:MGI Symbo... [more]
Ccdc337.407e-1730.31coiled-coil domain containing 33 [Source:MGI Symbo... [more]
Ccdc331.031e-1326.96coiled-coil domain containing 33 [Source:MGI Symbo... [more]
Ccdc334.459e-1131.00coiled-coil domain containing 33 [Source:MGI Symbo... [more]
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BLAST of C2H2-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q8N5R6|CCD33_HUMAN3.642e-1629.20Coiled-coil domain-containing protein 33 OS=Homo s... [more]
sp|Q5XIR4|CCD33_RAT1.722e-1026.38Coiled-coil domain-containing protein 33 OS=Rattus... [more]
sp|Q3ULW6|CCD33_MOUSE5.573e-1031.00Coiled-coil domain-containing protein 33 OS=Mus mu... [more]
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BLAST of C2H2-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1I8GXG01.173e-4232.92Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A1I8I8P21.173e-4232.92Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A0B7AS325.949e-4233.73Uncharacterized protein OS=Arion vulgaris OX=10286... [more]
A0A1I8HL455.971e-4233.13Uncharacterized protein OS=Macrostomum lignano OX=... [more]
A0A267ECT21.526e-4033.93Uncharacterized protein OS=Macrostomum lignano OX=... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ccdc332.674e-2734.12coiled-coil domain containing 33 [Source:NCBI gene... [more]
ccdc334.315e-2734.12coiled-coil domain containing 33 [Source:NCBI gene... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ccdc334.823e-2929.64coiled-coil domain containing 33 [Source:ZFIN;Acc:... [more]
CCDC331.136e-2129.26coiled-coil domain containing 33 [Source:HGNC Symb... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO400231.174e-1028.19Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 4
Match NameE-valueIdentityDescription
SMESG000006932.10.000e+089.83SMESG000006932.1[more]
SMESG000006935.11.428e-2886.67SMESG000006935.1[more]
SMESG000027399.16.933e-7100.00SMESG000027399.1[more]
SMESG000027399.17.356e-7100.00SMESG000027399.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30029309 ID=SMED30029309|Name=C2H2-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1535bp
CGACGTCATTCTCCAACAGGAAATTTTGTCTCCAAAATTGACTGGCGCCG
GATTTCTCGGCTGTGGGTGCACACCACTTATGAAACGATGGACAATCAAA
AAAAAAAAAATAATCACCAATAAATTTATTATCAAACATTCGATATGATG
TTGTCCACATTTTCTGGAGTCGCACGTGCGCACACAGTGAGATACTGGTT
CGGCGTGTAGTTTTTGATTGATTAATTGGATTGTTCTAAATTATTAATAG
TAAATTAGCCTCAGGCTGATAATAATGATAACAATAATAATATAATAAAT
AATTCAGGTGCTCTGGAATATTATTCCCCTCTCTCCTCACCAGAATGTAC
ATGGCGACATTTTTGCAGTCTTCCATTTGAATTGTCTGCAATGAAAAGTT
AGAAACACACAGAAACCTATACAAAGCTGAGATTTATTGTAGTTATTGTG
GAAGTGATTGCTGCATTTTCATTGGTCATTGATGCCGAATTGAGCAGGCA
TGCATACCATCTTAGAAATATTCAACCTTGCATTAACTATTGTATTTGTC
TATTGATTATTTTAGTAGATATTCTGTACTTAATGGCAACGCTCTATTAT
CGTCCATATACAACCGATTTGCAAAATGATGATAAATCCAATAACTCATT
CCGAGAAGATCTGTTGCCAGAATACCAATATATTTTTGAATCAGACAAAG
AATCTTTAGTTATTGAACCTGATTTTCAACCGGAAGCAGTTGAAGAAAAC
GGACCAAGTGCGGATAGATATAAACTAGCAATGCGTAGAATGAGTACGGA
AATTCTTTACCTCCGTGAACAAATGAAAAGTCTTTTGGAAAGAAATTCTC
TGCTTCAATGTAATTCATGTGGTCATCACAAAGAGACGTCAGTGCTTTTT
GGGGAAGTAGTGGACATTGATTCAATTTCTAAAGAGGAGTTAATTAAAAA
ATACATTTTACTACATTCCAAGTATGAAGAATCATGCTCCGATCTCAAGA
CATATCAAGACAAAGTTCATAAGTTGCAGATTGATTTAATAAAGAAAAAT
GATCAAGAAGCAGAGTTTTTAAAGATGAACAAGGCTCATTCTTCCCAAAA
TGTTTTAATTCAAAATCTTCAGAAGAGAATCGGTAAAATAAAATTATTAG
AAGTAACAATTAAAGATCAAGAACTTATAATTGCTAAAATGGAAAAGCAG
ATTGAAAAAAACAATAAAAATAAAGCTGGAAACTTGTCACCAATAAAAGA
AGTTTTAAGTTCAAGAGAGAAAGAAATAAATTCAACTCTTAAGGATGAAA
ATACAAGACTGCGTCATGAAATTGACATGGTAAAGAATAACCAACCAAAA
TTGAACAATATTAACAAGATGTCAGATTCTGAAAGATTAGAATTATATCA
GTTGCTGGACAAAGCTGAACAAAGAATTATGGCATTAGAAAATCAGGTCT
CAAACAATCAAAGAGATTGGCAAAAAGAAAAAAAGAAAATAACTGAATTA
GACGAATTCGGATTATCAAAGATAAGATTCTAGTG
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protein sequence of SMED30029309-orf-1

>SMED30029309-orf-1 ID=SMED30029309-orf-1|Name=SMED30029309-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=317bp
MATLYYRPYTTDLQNDDKSNNSFREDLLPEYQYIFESDKESLVIEPDFQP
EAVEENGPSADRYKLAMRRMSTEILYLREQMKSLLERNSLLQCNSCGHHK
ETSVLFGEVVDIDSISKEELIKKYILLHSKYEESCSDLKTYQDKVHKLQI
DLIKKNDQEAEFLKMNKAHSSQNVLIQNLQKRIGKIKLLEVTIKDQELII
AKMEKQIEKNNKNKAGNLSPIKEVLSSREKEINSTLKDENTRLRHEIDMV
KNNQPKLNNINKMSDSERLELYQLLDKAEQRIMALENQVSNNQRDWQKEK
KKITELDEFGLSKIRF*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0005515protein binding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000018Category 4 cell
PLANA:0000034epidermis
PLANA:0002032epidermal cell
Vocabulary: INTERPRO
TermDefinition
IPR039889CCD33
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 268..295
NoneNo IPR availableCOILSCoilCoilcoord: 233..253
NoneNo IPR availableCOILSCoilCoilcoord: 186..213
NoneNo IPR availableCOILSCoilCoilcoord: 138..158
IPR039889Coiled-coil domain-containing protein 33PANTHERPTHR21623SPERIOLIN-BINDING FACTORcoord: 55..303