TNF receptor-associated factor
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30028787 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 63.1586 bits (152), Expect = 3.685e-10 Identity = 39/142 (27.46%), Postives = 69/142 (48.59%), Query Frame = 3 Query: 504 IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 369 VHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 504
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 63.1586 bits (152), Expect = 3.685e-10 Identity = 39/142 (27.46%), Postives = 69/142 (48.59%), Query Frame = 3 Query: 504 IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 369 VHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 504
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 63.1586 bits (152), Expect = 4.534e-10 Identity = 39/142 (27.46%), Postives = 69/142 (48.59%), Query Frame = 3 Query: 504 IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 394 VHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 529
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 63.1586 bits (152), Expect = 4.534e-10 Identity = 39/142 (27.46%), Postives = 69/142 (48.59%), Query Frame = 3 Query: 504 IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 394 VHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 529
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 62.7734 bits (151), Expect = 5.359e-10 Identity = 39/142 (27.46%), Postives = 69/142 (48.59%), Query Frame = 3 Query: 504 IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 311 VHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 446
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf3 (TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]) HSP 1 Score: 65.855 bits (159), Expect = 3.428e-11 Identity = 60/256 (23.44%), Postives = 108/256 (42.19%), Query Frame = 3 Query: 162 FQQKICEMETNEMENLEKIEQLNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTETKCQQQIGELKXXXXXXXXXXXXEMEMLCRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFI------YSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 +QK+ M+ + EK+ ++ E+ L+ R +R E+ET S+ SMR + ++ C + + L R D MS + D ++ ++ +K+ +ET N G WKI + +++++ + YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G + + PS + + +P + N Sbjct: 314 LEQKLVSMQMLMSSHSEKLLEVEMELRELRP-LRAMREEVETLRGSVESMRSMVSSLDSSCVNSASGSHTLASLE--------QQLTRHDDLMS--------------------VHDVRLAEMDLKLQVLETASFN----GTLIWKIRDYKRRKQEAVVSKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLQWPFKQKVTL--MLMDQGPARKHLGDAFKPDPSSSSFRRPTGEMN 534
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: BX901915.1 (pep chromosome:GRCz11:CHR_ALT_CTG5_1_18:28764891:28768979:-1 gene:ENSDARG00000109857.1 transcript:ENSDART00000191629.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX901915.1) HSP 1 Score: 53.1434 bits (126), Expect = 1.770e-7 Identity = 41/140 (29.29%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKLINAEIC-GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRP--SDARWGKPVDDRN 896 + DL I ME + + ++A G F WKI + K+ +D ++S F++ GYKMCL + + G + + F ++RG + L WPF VT+ + N R I + RP S + + +PV D N Sbjct: 104 LRDLSIVEMEAKMREMSAATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNN----REHIID-AFRPDISSSSFQRPVSDMN 238
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: AL844899.1 (pep chromosome:GRCz11:CHR_ALT_CTG5_2_4:28756846:28760787:-1 gene:ENSDARG00000111038.1 transcript:ENSDART00000183806.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AL844899.1) HSP 1 Score: 53.1434 bits (126), Expect = 1.770e-7 Identity = 41/140 (29.29%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKLINAEIC-GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRP--SDARWGKPVDDRN 896 + DL I ME + + ++A G F WKI + K+ +D ++S F++ GYKMCL + + G + + F ++RG + L WPF VT+ + N R I + RP S + + +PV D N Sbjct: 104 LRDLSIVEMEAKMREMSAATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNN----REHIID-AFRPDISSSSFQRPVSDMN 238
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf2a (Tnf receptor-associated factor 2a [Source:ZFIN;Acc:ZDB-GENE-071120-2]) HSP 1 Score: 51.6026 bits (122), Expect = 1.110e-6 Identity = 41/140 (29.29%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKLINAEIC-GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRP--SDARWGKPVDDRN 896 + DL I ME + + ++A G F WKI + K+ +D ++S F++ GYKMCL + + G + + F ++RG + L WPF VT+ + N R I + RP S + + +PV D N Sbjct: 404 LRDLSIVEMEAKMREMSAATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNN----REHIID-AFRPDISSSSFQRPVSDMN 538
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf2b (Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]) HSP 1 Score: 49.2914 bits (116), Expect = 5.455e-6 Identity = 29/100 (29.00%), Postives = 49/100 (49.00%), Query Frame = 3 Query: 534 IKMMEMETKLINAEIC---GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTI 791 +++ E E L + C G F WKI ++ +D ++S F+S GYKMCL + + G + + F +++G+Y+ L WPF VT+ Sbjct: 364 LQLAESEQSLRELQFCTYDGVFIWKIAEFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMKGKYDALLKWPFSQKVTL 463
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: hspb6 (heat shock protein family B (small) member 6 [Source:Xenbase;Acc:XB-GENE-876273]) HSP 1 Score: 60.4622 bits (145), Expect = 1.736e-9 Identity = 48/175 (27.43%), Postives = 82/175 (46.86%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKLI-NAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRP--SDARWGKPVDDRN--EGIQIY------NIPCDAFVNGNDQLLIKCRVE 977 M D+ + +EM + + G F WKI +L + D +YS F++ GYK+CL + + G + + F +++GEY+ L WPFK+ VT + N R S + RP + A + +P++D N G ++ N P A++ N L I+C ++ Sbjct: 208 MKDIVLNELEMRSACLEQTSYDGVFLWKISDLTNKSHDAVTGRAISLYSPAFYTAKYGYKVCLRIYLNGDGAGKGTHVSLFFTVMKGEYDALLPWPFKHKVTFVLVDHNN----RDSVFD-AFRPDVTSASFQRPINDMNVASGCPLFCPIAKLNSPKHAYIREN-TLYIRCIID 376
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 60.4622 bits (145), Expect = 2.844e-9 Identity = 38/142 (26.76%), Postives = 68/142 (47.89%), Query Frame = 3 Query: 504 IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK V++ + G R + P+ + + KP + N Sbjct: 362 VHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSL--MLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMN 497
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 60.077 bits (144), Expect = 3.402e-9 Identity = 38/142 (26.76%), Postives = 68/142 (47.89%), Query Frame = 3 Query: 504 IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK V++ + G R + P+ + + KP + N Sbjct: 387 VHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSL--MLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMN 522
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: egf (epidermal growth factor [Source:Xenbase;Acc:XB-GENE-951823]) HSP 1 Score: 54.299 bits (129), Expect = 2.604e-7 Identity = 45/180 (25.00%), Postives = 81/180 (45.00%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKL--INAEIC-GKFEWKIEN---LLK---QEKDKFIYSNPFFSGPSGYKMCLSV------IQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRNEG-------IQIYNIPCDAFVNGNDQLLIKCRVEEEHNL 992 +N+LK + ++ +L + ++ C G F W+I N LLK +E+ I+S F++G GYK+CL + Q I + H ++GEY+ L WP + + + + G + +P + +P RN + + + +V ND LL++C V +L Sbjct: 363 VNELKHTIRSLDNRLGEMESQQCSGIFIWRINNFNSLLKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQDQEEVMDTKPELLAFQRPTVARNPKGFGYVTFMHLQALKQRQYVK-NDTLLVRCSVTTHLDL 541
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 63.5438 bits (153), Expect = 1.853e-10 Identity = 43/169 (25.44%), Postives = 80/169 (47.34%), Query Frame = 3 Query: 429 IDKMSEQKADGASRVDN--NDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 +DK + Q A +++ + + + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 341 VDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 503
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 63.5438 bits (153), Expect = 1.853e-10 Identity = 43/169 (25.44%), Postives = 80/169 (47.34%), Query Frame = 3 Query: 429 IDKMSEQKADGASRVDN--NDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 +DK + Q A +++ + + + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 341 VDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 503
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 63.5438 bits (153), Expect = 2.033e-10 Identity = 43/169 (25.44%), Postives = 80/169 (47.34%), Query Frame = 3 Query: 429 IDKMSEQKADGASRVDN--NDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 +DK + Q A +++ + + + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 366 VDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 528
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf6 (TNF receptor-associated factor 6 [Source:MGI Symbol;Acc:MGI:108072]) HSP 1 Score: 55.4546 bits (132), Expect = 7.220e-8 Identity = 46/167 (27.54%), Postives = 76/167 (45.51%), Query Frame = 3 Query: 528 LKIKMMEMETKLINAEICGKFEWKIENL---LK---QEKDKFIYSNPFFSGPSGYKMC------LSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN-EGI-QIYNIPCDAFVNG----NDQLLIKCRV 974 L+ K+ EME + N G + WKI N LK +E+ I+S F++G GYK+C L Q I + H ++GEY+ L WPF+ + + + I ++ +P + +P RN +G + + +A G +D LL++C V Sbjct: 345 LEDKVAEMEAQQCN----GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEALIRQNHEEVMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQGTFIKDDTLLVRCEV 507
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf1 (TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]) HSP 1 Score: 50.447 bits (119), Expect = 2.589e-6 Identity = 42/153 (27.45%), Postives = 70/153 (45.75%), Query Frame = 3 Query: 582 GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRP--SDARWGKPVDDRN--EGIQIY------NIPCDAFVNGNDQLLIKCRVE 977 G F WKI N+ K+ + ++S F++ GYK+CL + + G + + ++RGEY+ L WPF+ VT + N R I + RP S A + +P + N G ++ P A+V +D + +KC V+ Sbjct: 260 GTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNN----REHAID-AFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVK-DDTMFLKCIVD 406
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q60803|TRAF3_MOUSE (TNF receptor-associated factor 3 OS=Mus musculus OX=10090 GN=Traf3 PE=1 SV=2) HSP 1 Score: 63.5438 bits (153), Expect = 1.422e-9 Identity = 43/169 (25.44%), Postives = 80/169 (47.34%), Query Frame = 3 Query: 429 IDKMSEQKADGASRVDN--NDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 +DK + Q A +++ + + + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 366 VDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 528
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q13114|TRAF3_HUMAN (TNF receptor-associated factor 3 OS=Homo sapiens OX=9606 GN=TRAF3 PE=1 SV=2) HSP 1 Score: 63.1586 bits (152), Expect = 2.178e-9 Identity = 39/142 (27.46%), Postives = 69/142 (48.59%), Query Frame = 3 Query: 504 IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 + D ++ D+ ++ +ET N G WKI + +++++ +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G+ R + P+ + + KP + N Sbjct: 394 VHDIRLADMDLRFQVLETASYN----GVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTL--MLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMN 529
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q6DJN2|TRF6B_XENLA (TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.501e-7 Identity = 44/174 (25.29%), Postives = 75/174 (43.10%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKL--INAEIC-GKFEWKIENLL------KQEKDKFIYSNPFFSGPSGYKMCLSV------IQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRNEG-------IQIYNIPCDAFVNGNDQLLIKCRV 974 +N+LK + +E KL ++ C G F WKI+ ++EK I+S F++G GYK+CL + Q I + H ++GEY+ L WP + + + G I + +P + +P RN + + + +V ND L ++C V Sbjct: 361 VNELKHTIRSLEDKLLDVDGHHCNGVFIWKIKGFSGLQKTQEEEKPVVIHSPGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLHGTIRLSILDQSEGAIIQDQEEVMDTKPDLLAFQRPTTQRNPKGFGYVTFMHLNTLKQRQYVK-NDTLFVRCAV 533
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q3ZCC3|TRAF6_BOVIN (TNF receptor-associated factor 6 OS=Bos taurus OX=9913 GN=TRAF6 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.843e-7 Identity = 46/174 (26.44%), Postives = 82/174 (47.13%), Query Frame = 3 Query: 519 MNDLK--IKMMEMETKLINAEIC-GKFEWKIENL---LK---QEKDKFIYSNPFFSGPSGYKMC----LSVIQSSRGQIFVSF--HLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRNEG-------IQIYNIPCDAFVNGNDQLLIKCRV 974 +N+LK I+ +E + I A+ C G + WKI N LK +EK I+S F++G GYK+C L + + R ++S H ++GEY+ L WPF+ + + + + ++ +P + +P RN + + + F+ +D LL++C V Sbjct: 347 VNELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAAVRQNHEEIMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIK-DDTLLVRCEV 519
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|B5DF45|TRAF6_RAT (TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 3.844e-7 Identity = 46/170 (27.06%), Postives = 77/170 (45.29%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKLINAEICGKFEWKIENL---LK---QEKDKFIYSNPFFSGPSGYKMC------LSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN-EGI-QIYNIPCDAFVNG----NDQLLIKCRV 974 + L+ K+ EME + N G + WKI N LK +E+ I+S F++G GYK+C L Q I + H ++GEY+ L WPF+ + + + I ++ +P + +P RN +G + + +A G +D LL++C V Sbjct: 342 IRSLEDKVAEMEAQQCN----GIYIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAVIRQNHEEVMDAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQGTFIKDDTLLVRCEV 507
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A0L8HQP6 (MATH domain-containing protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22008610mg PE=4 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.944e-11 Identity = 66/246 (26.83%), Postives = 104/246 (42.28%), Query Frame = 3 Query: 198 MENLEKIEQLNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTETKCQQQIGELKXXXXXXXXXXXXEMEMLCRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFE----WKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDR----PSDARWGKPVDDRN 896 EN +K L E+++ L D +RL+ + VQ + S +MT ++ L ID++ Q + +D G + D ++ ++ K+ + +AE+ K WK + LK K FIYS PF+S GYKMC V + G + F +++GEY++ LTWPFK+ VT+ + G YSDR P+ + KP D N Sbjct: 169 FENKKKFVNLTEKLIVLDQDLQRLKEGTDKQVQILKSKESITDMTT------------------------IQNLSTLIDQLLTQ----VTSIDRQIG-----LHDMRIEEMNSKLTSVTHPNYDAEVLMKISNYSRWK--SALKTSKTSFIYSEPFYSSKYGYKMCAKVYLNGDGIGKGTHLSFYFTIMKGEYDNILTWPFKHKVTLTVLDQFGGE------KNYSDRFLPDPNSKSFHKPSSDYN 373
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A4C1WCS8 (TNF receptor-associated factor 6 OS=Eumeta variegata OX=151549 GN=TRAF6 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.644e-10 Identity = 41/143 (28.67%), Postives = 72/143 (50.35%), Query Frame = 3 Query: 537 KMMEMETKLINAEIC-GKFEWKIENL------LKQEKDKFIYSNPFFSGPSGYKMC--LSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYR---SSTIKYSDRPSDARWGKPVDDRNE---GIQIYNI 920 K ++M T C G+F W+++ + +K + ++ IYS PF++ P GYK C L++ Q + + ++ HL++ ++D LTWPF TI + N YR S + + P+ + +P DR+ G Q Y + Sbjct: 178 KQLDMLTHTAARRTCFGEFLWRVDGISGHIATMKADHNRIIYSEPFYTSPYGYKFCLRLNISQHNSNYLALNLHLMKSPHDDCLTWPFSGSFTITMV-----NRYRPDLSEVVSMASNPAVLAFTRPTLDRHPRGFGYQEYGL 315
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A3M6V1C0 (Uncharacterized protein (Fragment) OS=Pocillopora damicornis OX=46731 GN=pdam_00012082 PE=4 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.265e-9 Identity = 44/171 (25.73%), Postives = 85/171 (49.71%), Query Frame = 3 Query: 420 CRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSV----IQSSRG-QIFVSFHLIRGEYNDKLTWPFKYGVTIDAI-TTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 C++ID ++ Q+ + RVD + E +K++ E +L N G++ WKIEN+ + +D +YS F++ P GYK+CL + ++S G + + H++RG+Y++ L WPF G ++ + + + ++ T +P + + +PV N Sbjct: 64 CKEIDCLTLQQKETVDRVDELEVE--------------VKLLRQEQQLCN----GRYVWKIENIDRCCEDAISGVSPVMYSPGFYASPHGYKLCLRINLNGVKSGVGTHVALYVHMMRGDYDNHLEWPFSKGFSLSIVDQSDDESLQYHITETVITKPELSAFQRPVPPHN 216
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A2B4SA99 (TNF receptor-associated factor 6-B OS=Stylophora pistillata OX=50429 GN=traf6-b PE=4 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.022e-9 Identity = 37/132 (28.03%), Postives = 71/132 (53.79%), Query Frame = 3 Query: 531 KIKMMEMETKLI--NAEIC-GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSV----IQSSRG-QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPV 884 ++ +++E KL+ ++C G++ WKIEN+ + +D +YS F++ P GYKMCL + ++S G + + H++RG+++ L WPF G T+ + G++ T +P + + +PV Sbjct: 318 RVHKLKVEVKLLQQGQQLCNGQYIWKIENMDRCCQDAVSGVSPVMYSPGFYTSPCGYKMCLRINLNGVKSGVGTHVALHVHMMRGDHDKHLEWPFSKGFTLSIVDQSEGSLQYHITKTVVTKPEPSVFQRPV 449
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: S4R4E5 (TNF receptor-associated factor OS=Petromyzon marinus OX=7757 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.934e-9 Identity = 40/155 (25.81%), Postives = 74/155 (47.74%), Query Frame = 3 Query: 465 SRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 S + +D + F D ++ ++ ++ +ET N GK WKI + ++++D +YS PF++ P GY+MC + G + + F ++RGEY+ L WPF+ VT+ + G R + + P+ + + +P D N Sbjct: 292 SALSRHDTQLFAH--DTRLAEMDLRFQVLETASYN----GKLVWKIRDYARRKQDAVSGRTLSLYSQPFYTSPFGYRMCARAYLNGDGVGRGTHLSLFFVVMRGEYDALLPWPFRQRVTLTLLD--QGAARRQLSDTFKPDPASSSFRRPTSDMN 438
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: ENSAMXT00000035169.1 (pep primary_assembly:Astyanax_mexicanus-2.0:9:3354744:3362219:1 gene:ENSAMXG00000029095.1 transcript:ENSAMXT00000035169.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 51.2174 bits (121), Expect = 1.691e-7 Identity = 28/81 (34.57%), Postives = 43/81 (53.09%), Query Frame = 3 Query: 582 GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTI 791 G WKI + +++ + +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ Sbjct: 4 GTLIWKIRDYKRRKAEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTL 84
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:103028261]) HSP 1 Score: 53.1434 bits (126), Expect = 3.353e-7 Identity = 33/105 (31.43%), Postives = 52/105 (49.52%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKLINAEIC---GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTI 791 M DL+ + E E L + C G F WKI + ++ +D ++S F+S GYKMCL + + G + + F ++RG+Y+ L WPF VT+ Sbjct: 360 MRDLQ--LAESEQALRELQFCTYDGVFVWKISDFSRRRQDALAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMRGKYDALLKWPFSQKVTL 462
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf5 (TNF receptor-associated factor 5 [Source:NCBI gene;Acc:103031120]) HSP 1 Score: 51.2174 bits (121), Expect = 1.319e-6 Identity = 37/146 (25.34%), Postives = 67/146 (45.89%), Query Frame = 3 Query: 582 GKFEWKIENLL-KQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQI--------YNIPCDAFVNGNDQLLIKCRVE 977 GK WK+ + K+E + S PF++ SGYK+ V G + + L+RG+++ L WPF+ VT+ A+ ++GN S + ++ + + +P + N + P +A +D L IK +V+ Sbjct: 400 GKLIWKVHDYHRKKEAGTALNSPPFYTSHSGYKLSARVYLGGEGTARGTHLSLYVMLMRGDFDSLLPWPFRQNVTL-AVLDQSGNRNHVS-LSFTPDLASNNFRRPTSETNAALGFPRFITHADLEAPRNAAYVRDDTLFIKVKVD 543
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf2a (TNF receptor-associated factor 2-like [Source:NCBI gene;Acc:103036375]) HSP 1 Score: 50.8322 bits (120), Expect = 1.858e-6 Identity = 41/140 (29.29%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKLINAEIC-GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRP--SDARWGKPVDDRN 896 + DL I ME + + ++A G F WKI + K+ +D ++S F++ GYKMCL + + G + + F ++RG + L WPF VT+ + N R I + RP S + + +PV D N Sbjct: 401 LRDLSIVEMEGKMREMSAATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNN----REHIID-AFRPDISSSSFQRPVSDMN 535
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf2a (TNF receptor-associated factor 2-like [Source:NCBI gene;Acc:103036375]) HSP 1 Score: 50.447 bits (119), Expect = 2.147e-6 Identity = 41/140 (29.29%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKLINAEIC-GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRP--SDARWGKPVDDRN 896 + DL I ME + + ++A G F WKI + K+ +D ++S F++ GYKMCL + + G + + F ++RG + L WPF VT+ + N R I + RP S + + +PV D N Sbjct: 288 LRDLSIVEMEGKMREMSAATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNN----REHIID-AFRPDISSSSFQRPVSDMN 422
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000074.1 (pep scaffold:Pmarinus_7.0:GL482142:165593:173010:-1 gene:ENSPMAG00000000066.1 transcript:ENSPMAT00000000074.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 69.707 bits (169), Expect = 3.023e-13 Identity = 40/155 (25.81%), Postives = 74/155 (47.74%), Query Frame = 3 Query: 465 SRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 S + +D + F D ++ ++ ++ +ET N GK WKI + ++++D +YS PF++ P GY+MC + G + + F ++RGEY+ L WPF+ VT+ + G R + + P+ + + +P D N Sbjct: 292 SALSRHDTQLFAH--DTRLAEMDLRFQVLETASYN----GKLVWKIRDYARRKQDAVSGRTLSLYSQPFYTSPFGYRMCARAYLNGDGVGRGTHLSLFFVVMRGEYDALLPWPFRQRVTLTLLD--QGAARRQLSDTFKPDPASSSFRRPTSDMN 438
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002130.1 (pep scaffold:Pmarinus_7.0:GL484662:8457:12718:-1 gene:ENSPMAG00000001936.1 transcript:ENSPMAT00000002130.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 63.929 bits (154), Expect = 1.940e-11 Identity = 38/140 (27.14%), Postives = 68/140 (48.57%), Query Frame = 3 Query: 510 DGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 DG ++ + ++ +ET A GK WKI + +++++ +YS PF++ P GYKMC + G + + F ++RGEY+ L WPF+ VT+ + G R + ++ P+ + +P D N Sbjct: 248 DGLLDTAERRLQVLET----AGYSGKLVWKIRDYARRKQEAASGRTLSLYSQPFYTSPFGYKMCARAYLNGDGVGRGTHLSLFFVVMRGEYDALLEWPFRRRVTLSLLD--QGAARRHLSDTFTPDPASGSFRRPDGDMN 381
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO49464 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG36]) HSP 1 Score: 60.077 bits (144), Expect = 6.358e-10 Identity = 75/288 (26.04%), Postives = 129/288 (44.79%), Query Frame = 3 Query: 195 EMENLEKIEQLNEEMVALKDDNRRLRS-EMETNVQSINSMRQQIEMTETKCQQQIGELKXXXXXXXXXXXXEMEMLCRKIDKMSEQKADGAS-----RVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLK--QE----KDKFIYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRN----GNIYRSSTIKYSDRPSDARWGKPVDDRN--EGIQIY----NIPCDAFVNGNDQLLIKCRVE 977 E E ++ EQ+ E+ AL N+ LR+ + + NV + Q+ E+ E K + Q+ E++ ++Q ++L R S + G + R D N+ + I +DLK++M+E + G + WKI+ + QE K IYS PF+ G GYK C V + G + + F L+RGE++ L WPF+ VT + G+ +R P+ + + +P + N G ++ N+ A+V +D + IK V+ Sbjct: 249 EKERAKQQEQMYEQREALAVANQNLRTYQGKLNVIERSVAEQRRELAELKERIQLQEVEAAIREQDRRLGMIENEASRGAAPSSGPGSMGGTMALERRQDRNEHQLALHDIQLAEHDLKLQMLEATSYD------GTYIWKIDEYTRRYQEGVSGKTPSIYSPPFYVGRYGYKACARVYPNGDGMGKGSHLSLFFVLMRGEFDALLPWPFRQKVTFKLLDQDRVHDIGDTFRPD-------PTSSSFKRPTSNMNIASGCPLFISHTNLQTRAYVR-DDTMFIKIAVD 522
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO35237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SM27]) HSP 1 Score: 55.8398 bits (133), Expect = 1.537e-8 Identity = 31/91 (34.07%), Postives = 47/91 (51.65%), Query Frame = 3 Query: 582 GKFEWKIENLLKQEKDK------FIYSNPFFSGPSGYKMCLSVIQSSRGQ-------IFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNG 815 G F WKI+ ++ + IYS+PF++ GYK+C + + G IF++ L+RGEY+ L WPF+ +TI I NG Sbjct: 380 GTFLWKIDKFTERYAEAKSGNATSIYSSPFYTHRFGYKLCARLFPNGDGSARDNYLSIFIA--LMRGEYDSILPWPFQETITITLIDQDNG 468
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO48773 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI91]) HSP 1 Score: 54.6842 bits (130), Expect = 3.611e-8 Identity = 46/167 (27.54%), Postives = 76/167 (45.51%), Query Frame = 3 Query: 510 DGKMNDLKIKMMEMETKLINAE--IC-GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSV----IQSSRGQIFVSF-HLIRGEYNDKLTWPFKYGVTI------DAITTRNG---NIYRSSTIKYSDRPSDARWGK--------PVDDRNEGIQIYN 917 D ++ +L K+M +ET+ I E +C G F WK++N + + I+S PF++ GYKMCL + + G+ F H+++G+++ L WPF +T+ D I +R + + RP+ R K P+D EG I N Sbjct: 305 DRRIAELTHKLMRLETREIELEGRVCNGTFIWKLDNFRQCREGSIAGLTAAIHSPPFYTSMYGYKMCLRMNLNGVDGGLGEHVSLFIHMMQGDWDGILEWPFIGRITLSILDQSDQIDSRRPISETLVAKPNLLAFQRPTSPRNHKGYGYVEFCPIDQLTEGQYIKN 471
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO38873 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBN4]) HSP 1 Score: 53.1434 bits (126), Expect = 1.240e-7 Identity = 26/77 (33.77%), Postives = 40/77 (51.95%), Query Frame = 3 Query: 594 WKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTI 791 WKI N+ + + YS FF+GP GYKMC + + G + + F ++RGE++ L WPF+ VT+ Sbjct: 337 WKITNVANKRSEATSGRVTSFYSPCFFTGPHGYKMCARIYLNGDGMGRNHHVSLFFVIMRGEFDALLRWPFRQKVTL 413
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO40665 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6K0]) HSP 1 Score: 50.0618 bits (118), Expect = 7.667e-7 Identity = 42/136 (30.88%), Postives = 68/136 (50.00%), Query Frame = 3 Query: 534 IKMMEMETKLINAEIC--GKFEWKIENLL--------KQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRGQ---IFVSFHLI--RGEYNDKLTWPFKYGVTI------DAITTRNGNIYRSSTIKYSD---RPSDAR 869 I++ E+E + +IC GKF WKI N K+EK+K + S PF++G GYK+ + GQ +S +++ +G+Y+ L WPF+ V D T+R +R + + SD RP+ A+ Sbjct: 213 IRIRELEQR--QEKICTNGKFLWKISNYTQLFQQSATKKEKEK-LCSPPFYTGQYGYKLRAEAFLNGLGQGKGTHLSLYVVIMKGDYDSVLPWPFQQRVDFILIDQDDDFTSRQNKTWRLTCDRNSDYFGRPNKAK 345
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf3 (TNF receptor associated factor 3 [Source:NCBI gene;Acc:101161601]) HSP 1 Score: 61.6178 bits (148), Expect = 4.828e-10 Identity = 39/138 (28.26%), Postives = 67/138 (48.55%), Query Frame = 3 Query: 516 KMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRN 896 ++ D+ ++ +ET N G WKI + ++++D +YS PF++G GYKMC V + G + + F ++RGEY+ L WPFK VT+ + G + + PS + + +PV + N Sbjct: 280 RLADMDLRFQVLETASYN----GTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTL--MLMDQGPSRKHLGDAFKPDPSSSSFRRPVAEMN 411
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: ENSORLT00000020861.2 (TNF receptor-associated factor 2 [Source:NCBI gene;Acc:101167626]) HSP 1 Score: 51.6026 bits (122), Expect = 1.089e-6 Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 519 MNDLKIKMMEMETKLINAEIC-GKFEWKIENLLKQEKDKF------IYSNPFFSGPSGYKMCLSVIQSSRG-----QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRP--SDARWGKPVDDRN 896 + DL I ME + K ++A G F WKI + K+ +D ++S F++ GYKMCL + + G + + F ++RG + L WPF VT+ + N R I + RP S + + +PV D N Sbjct: 398 LRDLSIVEMEGKMKDMSAATYDGIFIWKISDFTKKRQDAMAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNN----REHIID-AFRPDISSSSFQRPVSDMN 532
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000015087.1 (SMESG000015087.1) HSP 1 Score: 359.762 bits (922), Expect = 1.640e-121 Identity = 194/276 (70.29%), Postives = 218/276 (78.99%), Query Frame = 3 Query: 165 QQKICEMETNEMENLEKIEQLNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTETKCQQQIGELKXXXXXXXXXXXXEMEMLCRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQIYNIPCDAFVNGNDQLLIKCRVEEEHNL 992 Q+KI EME M ++ + ++LN R LR E E + I +QIE+ LKQ+++Q QQ+ N+E+++L ID++ ++ + A E F+ IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITT+NGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQIYNIPCDAFVNGNDQLLIKCRVEEEHNL Sbjct: 190 QEKILEMERKTMNSMRETDELN----------RLLRRETEK-INQIWPRNEQIEL-----------LKQHFKQLQQEHNDEVKLLRSGIDEIHKKNENCAMA-----NENFSKIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTKNGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQIYNIPCDAFVNGNDQLLIKCRVEEEHNL 438 HSP 2 Score: 50.0618 bits (118), Expect = 1.930e-6 Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 2 Query: 2 IDLINNLLSEMESMKNEIIEVKRENSQFKQKIDNIELQ 115 ID INN E+ES+KNE IE+K EN+QFKQK NIELQ Sbjct: 148 IDQINNFFGEVESLKNENIELKMENNQFKQKFANIELQ 185
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000015087.1 (SMESG000015087.1) HSP 1 Score: 359.377 bits (921), Expect = 3.566e-121 Identity = 194/276 (70.29%), Postives = 218/276 (78.99%), Query Frame = 3 Query: 165 QQKICEMETNEMENLEKIEQLNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTETKCQQQIGELKXXXXXXXXXXXXEMEMLCRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQIYNIPCDAFVNGNDQLLIKCRVEEEHNL 992 Q+KI EME M ++ + ++LN R LR E E + I +QIE+ LKQ+++Q QQ+ N+E+++L ID++ ++ + A E F+ IIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITT+NGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQIYNIPCDAFVNGNDQLLIKCRVEEEHNL Sbjct: 198 QEKILEMERKTMNSMRETDELN----------RLLRRETEK-INQIWPRNEQIEL-----------LKQHFKQLQQEHNDEVKLLRSGIDEIHKKNENCAMA-----NENFSKIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTKNGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQIYNIPCDAFVNGNDQLLIKCRVEEEHNL 446 HSP 2 Score: 50.0618 bits (118), Expect = 2.078e-6 Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 2 Query: 2 IDLINNLLSEMESMKNEIIEVKRENSQFKQKIDNIELQ 115 ID INN E+ES+KNE IE+K EN+QFKQK NIELQ Sbjct: 156 IDQINNFFGEVESLKNENIELKMENNQFKQKFANIELQ 193
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000014712.1 (SMESG000014712.1) HSP 1 Score: 347.436 bits (890), Expect = 2.490e-116 Identity = 193/276 (69.93%), Postives = 226/276 (81.88%), Query Frame = 3 Query: 165 QQKICEMETNEMENLEKIEQLNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTETKCQQQIGELKXXXXXXXXXXXXEMEMLCRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSVIQSSRGQIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQIY---NIPCDAFVNGNDQLLIKCRVEEE 983 QQKIC+ME+NE+EN +IE+LNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTETKCQQQIGELKQNYQQQQQQLNNEMEMLCRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDL++ ++ ET+LIN IC KFEWKIENL +QE+ K I+S PF++GP+GYKMCLSV + +IFV FHL++G+ +D+L WPF+Y VTID I NG+I+ S IKYSD P A KP + RNE I +Y NI ++ N+QL++ C VE E Sbjct: 191 QQKICDMESNEIENRGEIERLNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTETKCQQQIGELKQNYQQQQQQLNNEMEMLCRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDLELGKIKKETRLINTGICWKFEWKIENLSQQERRKRIHSKPFYTGPNGYKMCLSV-NITDCRIFVGFHLMQGDSDDRLEWPFRYAVTIDLIDIENGDIWCSRKIKYSDAPDAAGRRKPGNGRNERILVYDLLNIQWNSPPIRNNQLVMNCLVEHE 465 HSP 2 Score: 53.5286 bits (127), Expect = 1.605e-7 Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 2 Query: 26 SEMESMKNEIIEVKRENSQFKQKIDNIELQSTSK 127 SEMESMKNEIIEVKREN Q KQKIDNI+LQS ++ Sbjct: 157 SEMESMKNEIIEVKRENLQSKQKIDNIDLQSVNQ 190
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070162.1 (SMESG000070162.1) HSP 1 Score: 322.013 bits (824), Expect = 5.034e-106 Identity = 180/298 (60.40%), Postives = 228/298 (76.51%), Query Frame = 3 Query: 165 QQKICEMETNEMENLEKIEQLNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTETKCQQQIGELKXXXXXXXXXXXXEMEMLCRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSV----------IQSSRG-----------QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQIY----NIPCDAFVNGNDQLLIKCRVEEE 983 QQKICEME+NEMEN +IEQLNEEMV LK++NRRLRSE+ETN QSIN++RQQI + ETK Q QI ELKQN+QQQQQ+LN+E EM R+I+K++EQ A+GASRVDNN+GETF +IDG++N+L+++M+EMET+ INA+I G+FEWKIENL +Q KDK+I+S PF+SGP+GYKMCLSV Q RG +I V F+++RG+ +DKL WPFKY VTID I T NG+I+RS TIKYSDRP A W KPV DRNE I +Y +IP ++ N++LLIKCR+E E Sbjct: 199 QQKICEMESNEMENRGEIEQLNEEMVVLKNENRRLRSEIETNAQSINAIRQQIGIIETKSQLQIDELKQNHQQQQQELNDEAEMPRREINKLNEQNANGASRVDNNNGETFKQVIDGEINNLELRMIEMETRFINAQIRGEFEWKIENLSQQVKDKWIHSKPFYSGPNGYKMCLSVNINHLEIENLSQRVRGRRMCLNVIIDWRICVGFYMMRGDSDDKLAWPFKYAVTIDVIDTANGDIWRSETIKYSDRPDAAGWMKPVTDRNERIPVYKWPDHIPLNSPPIRNNRLLIKCRLERE 496 HSP 2 Score: 68.5514 bits (166), Expect = 2.367e-12 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 2 Query: 5 DLINNLLSEMESMKNEIIEVKRENSQFKQKIDNIELQSTSK 127 DLINNLL EMESMKNE IE+KRENSQFKQKIDNIELQS ++ Sbjct: 158 DLINNLLGEMESMKNENIELKRENSQFKQKIDNIELQSANQ 198
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070162.1 (SMESG000070162.1) HSP 1 Score: 322.013 bits (824), Expect = 8.184e-106 Identity = 180/298 (60.40%), Postives = 228/298 (76.51%), Query Frame = 3 Query: 165 QQKICEMETNEMENLEKIEQLNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTETKCQQQIGELKXXXXXXXXXXXXEMEMLCRKIDKMSEQKADGASRVDNNDGETFTWIIDGKMNDLKIKMMEMETKLINAEICGKFEWKIENLLKQEKDKFIYSNPFFSGPSGYKMCLSV----------IQSSRG-----------QIFVSFHLIRGEYNDKLTWPFKYGVTIDAITTRNGNIYRSSTIKYSDRPSDARWGKPVDDRNEGIQIY----NIPCDAFVNGNDQLLIKCRVEEE 983 QQKICEME+NEMEN +IEQLNEEMV LK++NRRLRSE+ETN QSIN++RQQI + ETK Q QI ELKQN+QQQQQ+LN+E EM R+I+K++EQ A+GASRVDNN+GETF +IDG++N+L+++M+EMET+ INA+I G+FEWKIENL +Q KDK+I+S PF+SGP+GYKMCLSV Q RG +I V F+++RG+ +DKL WPFKY VTID I T NG+I+RS TIKYSDRP A W KPV DRNE I +Y +IP ++ N++LLIKCR+E E Sbjct: 206 QQKICEMESNEMENRGEIEQLNEEMVVLKNENRRLRSEIETNAQSINAIRQQIGIIETKSQLQIDELKQNHQQQQQELNDEAEMPRREINKLNEQNANGASRVDNNNGETFKQVIDGEINNLELRMIEMETRFINAQIRGEFEWKIENLSQQVKDKWIHSKPFYSGPNGYKMCLSVNINHLEIENLSQRVRGRRMCLNVIIDWRICVGFYMMRGDSDDKLAWPFKYAVTIDVIDTANGDIWRSETIKYSDRPDAAGWMKPVTDRNERIPVYKWPDHIPLNSPPIRNNRLLIKCRLERE 503 HSP 2 Score: 68.5514 bits (166), Expect = 2.507e-12 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 2 Query: 5 DLINNLLSEMESMKNEIIEVKRENSQFKQKIDNIELQSTSK 127 DLINNLL EMESMKNE IE+KRENSQFKQKIDNIELQS ++ Sbjct: 165 DLINNLLGEMESMKNENIELKRENSQFKQKIDNIELQSANQ 205 The following BLAST results are available for this feature:
BLAST of TNF receptor-associated factor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 4
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of TNF receptor-associated factor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of TNF receptor-associated factor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 2
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30028787 ID=SMED30028787|Name=TNF receptor-associated factor|organism=Schmidtea mediterranea sexual|type=transcript|length=1216bpback to top protein sequence of SMED30028787-orf-1 >SMED30028787-orf-1 ID=SMED30028787-orf-1|Name=SMED30028787-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=271bp METNEMENLEKIEQLNEEMVALKDDNRRLRSEMETNVQSINSMRQQIEMTback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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