Nuclear receptor

Overview
NameNuclear receptor
Smed IDSMED30028766
Length (bp)1718
Neoblast Clusters

Zeng et. al., 2018




 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30028766

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
nervous systemSMED30028766SMESG000076268.1 dd_Smed_v4_25420_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30028766SMESG000076268.1 dd_Smed_v4_25420_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:HGNC Symbol;Acc:HGNC:7973])

HSP 1 Score: 140.198 bits (352), Expect = 4.914e-36
Identity = 73/148 (49.32%), Postives = 89/148 (60.14%), Query Frame = 1
Query:  352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789
            +SR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++  Q      G+K  N  +  F   + L    F T       P  ++  A+ T P
Sbjct:    8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKEENGAAAHFPS-AALPAPAFFTAVTQLE-PHGLELAAVSTTP 151          
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:HGNC Symbol;Acc:HGNC:7973])

HSP 1 Score: 139.043 bits (349), Expect = 3.021e-35
Identity = 76/162 (46.91%), Postives = 93/162 (57.41%), Query Frame = 1
Query:  313 LTSG-AFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789
            L SG  +  L +    R  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++  Q      G+K  N  +  F   + L    F T       P  ++  A+ T P
Sbjct:   31 LGSGLPWPSLLESPGGRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKEENGAAAHFPS-AALPAPAFFTAVTQLE-PHGLELAAVSTTP 188          
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2E3 (nuclear receptor subfamily 2 group E member 3 [Source:HGNC Symbol;Acc:HGNC:7974])

HSP 1 Score: 124.79 bits (312), Expect = 9.976e-31
Identity = 59/105 (56.19%), Postives = 72/105 (68.57%), Query Frame = 1
Query:  337 LAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCK-ESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648
            L +  +   P   CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+  + +CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS      +  ES+
Sbjct:   34 LGEDPTGVSPSLQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESN 138          
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2E3 (nuclear receptor subfamily 2 group E member 3 [Source:HGNC Symbol;Acc:HGNC:7974])

HSP 1 Score: 125.176 bits (313), Expect = 1.633e-30
Identity = 59/105 (56.19%), Postives = 72/105 (68.57%), Query Frame = 1
Query:  337 LAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCK-ESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648
            L +  +   P   CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+  + +CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS      +  ES+
Sbjct:   34 LGEDPTGVSPSLQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESN 138          
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2F2 (nuclear receptor subfamily 2 group F member 2 [Source:HGNC Symbol;Acc:HGNC:7976])

HSP 1 Score: 118.242 bits (295), Expect = 4.935e-28
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLS----FDVFSYLNNHVFLTQKKSFPFPTS 759
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ +  CP+D   RNQCQ CR KKCL V M R+AVQ  R P +                 TH   +L+     +  SYL+ ++ L  +   P+PTS
Sbjct:   79 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPT---------------QPTHGQFALTNGDPLNCHSYLSGYISLLLRAE-PYPTS 194          
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: nhr-236 (Nuclear Hormone Receptor family [Source:UniProtKB/TrEMBL;Acc:Q9N418])

HSP 1 Score: 139.428 bits (350), Expect = 4.179e-37
Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHER 600
            CRVCGDRASG+HYGVLSCDGCRGFFKRS+RRNL Y CKES  C +DV RRNQCQACRF+KC++V MNR AVQHER
Sbjct:   13 CRVCGDRASGRHYGVLSCDGCRGFFKRSIRRNLRYSCKESGDCVIDVTRRNQCQACRFQKCITVAMNRHAVQHER 87          
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: nhr-67 (Nuclear hormone receptor family member nhr-67 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVV3])

HSP 1 Score: 121.709 bits (304), Expect = 9.928e-30
Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1
Query:  325 AFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNV-----CPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKR 627
            A  +++ P S    D  CRVC D +SGKHY + SCDGC GFFKRS+RR+ +YVCK         C VD   RNQC+ACR +KCL + MN+DAVQHER PR+ + +R
Sbjct:    4 AVSQMSVPSSRILLDVDCRVCEDHSSGKHYSIFSCDGCAGFFKRSIRRHRQYVCKNKGSPSEGQCKVDKTHRNQCRACRLRKCLEIGMNKDAVQHERGPRNSSLRR 109          
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: fax-1 (Nuclear hormone receptor FAX-1 [Source:UniProtKB/TrEMBL;Acc:G5EDJ0])

HSP 1 Score: 119.783 bits (299), Expect = 3.890e-29
Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 1
Query:  346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609
            P ++  P   C VCGD +SGKHYG+L+C+GC GFFKRSVRR L Y C+  +  C VD A RNQCQACR KKCL+  MN+DAVQ+ER PR
Sbjct:   92 PPTASSPTLCCAVCGDVSSGKHYGILACNGCSGFFKRSVRRRLIYRCQAGTGNCVVDKAHRNQCQACRLKKCLNKGMNKDAVQNERQPR 180          
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: fax-1 (Nuclear hormone receptor FAX-1 [Source:UniProtKB/TrEMBL;Acc:G5EDJ0])

HSP 1 Score: 119.013 bits (297), Expect = 1.065e-28
Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 1
Query:  346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609
            P ++  P   C VCGD +SGKHYG+L+C+GC GFFKRSVRR L Y C+  +  C VD A RNQCQACR KKCL+  MN+DAVQ+ER PR
Sbjct:   92 PPTASSPTLCCAVCGDVSSGKHYGILACNGCSGFFKRSVRRRLIYRCQAGTGNCVVDKAHRNQCQACRLKKCLNKGMNKDAVQNERQPR 180          
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: nhr-239 (Nuclear Hormone Receptor family [Source:UniProtKB/TrEMBL;Acc:Q9BKZ8])

HSP 1 Score: 108.612 bits (270), Expect = 2.226e-26
Identity = 57/121 (47.11%), Postives = 71/121 (58.68%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNV-CPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQK 735
            C +CGD++ G+HYGV +CDGC  FFKRSVR+N+ Y C   N  C VD  RRN C ACR  KC  +KMNR AVQ ER PR         +   +    T+NP+S  +D  S  +  V LT K
Sbjct:   11 CEICGDKSYGRHYGVWACDGCSCFFKRSVRKNIIYTCIAGNWKCVVDKGRRNWCPACRLAKCTRLKMNRLAVQTERGPR---------RLRCLQLKHTNNPISFKYD--SIFSKSVILTSK 120          
BLAST of Nuclear receptor vs. Ensembl Fly
Match: svp (gene:FBgn0003651 transcript:FBtr0331183)

HSP 1 Score: 123.25 bits (308), Expect = 1.881e-29
Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDI-NGYKTHNPLSLS-FDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQ 780
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ S  CP+D   RNQCQ CR KKCL + M R+AVQ  R P +         +  I NG    +P+ ++ F+  SYL++++ L  +   P+PTS   + +Q
Sbjct:  200 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANG----DPMGIAGFNGHSYLSSYISLLLRAE-PYPTSRYGQCMQ 331          
BLAST of Nuclear receptor vs. Ensembl Fly
Match: svp (gene:FBgn0003651 transcript:FBtr0082564)

HSP 1 Score: 122.865 bits (307), Expect = 2.105e-29
Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDI-NGYKTHNPLSLS-FDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQ 780
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ S  CP+D   RNQCQ CR KKCL + M R+AVQ  R P +         +  I NG    +P+ ++ F+  SYL++++ L  +   P+PTS   + +Q
Sbjct:  200 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANG----DPMGIAGFNGHSYLSSYISLLLRAE-PYPTSRYGQCMQ 331          
BLAST of Nuclear receptor vs. Ensembl Fly
Match: svp (gene:FBgn0003651 transcript:FBtr0082563)

HSP 1 Score: 123.635 bits (309), Expect = 3.224e-29
Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDI-NGYKTHNPLSLS-FDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQ 780
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ S  CP+D   RNQCQ CR KKCL + M R+AVQ  R P +         +  I NG    +P+ ++ F+  SYL++++ L  +   P+PTS   + +Q
Sbjct:  200 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANG----DPMGIAGFNGHSYLSSYISLLLRAE-PYPTSRYGQCMQ 331          
BLAST of Nuclear receptor vs. Ensembl Fly
Match: dsf (gene:FBgn0015381 transcript:FBtr0333245)

HSP 1 Score: 122.479 bits (306), Expect = 5.456e-29
Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = 1
Query:  367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES----NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609
            D  C+VCGDR+SGKHYG+ SCDGC GFFKRS+ RN  Y CK +      CPVD   RNQC+ACR  KC    MN+DAVQHER PR
Sbjct:   10 DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKCFQSAMNKDAVQHERGPR 94          
BLAST of Nuclear receptor vs. Ensembl Fly
Match: dsf (gene:FBgn0015381 transcript:FBtr0079145)

HSP 1 Score: 122.479 bits (306), Expect = 5.456e-29
Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = 1
Query:  367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES----NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609
            D  C+VCGDR+SGKHYG+ SCDGC GFFKRS+ RN  Y CK +      CPVD   RNQC+ACR  KC    MN+DAVQHER PR
Sbjct:   10 DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKCFQSAMNKDAVQHERGPR 94          
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: nr2e1 (nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127])

HSP 1 Score: 141.739 bits (356), Expect = 1.188e-36
Identity = 71/126 (56.35%), Postives = 83/126 (65.87%), Query Frame = 1
Query:  316 TSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES--NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNP 675
            TSG  D L    SSR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK      CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++      +   ++NG  TH P
Sbjct:    8 TSGCLDILNVK-SSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGTQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEVNGSSTHFP 132          
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: nr2e3 (nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63])

HSP 1 Score: 121.709 bits (304), Expect = 2.074e-29
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1
Query:  373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648
            +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+  + +CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS    R +  + D
Sbjct:   45 LCKVCSDTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDALDVD 137          
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: nr2e3 (nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63])

HSP 1 Score: 121.324 bits (303), Expect = 2.436e-29
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1
Query:  373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648
            +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+  + +CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS    R +  + D
Sbjct:   38 LCKVCSDTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDALDVD 130          
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: rxrba (retinoid x receptor, beta a [Source:NCBI gene;Acc:30530])

HSP 1 Score: 117.087 bits (292), Expect = 3.981e-29
Identity = 54/108 (50.00%), Postives = 75/108 (69.44%), Query Frame = 1
Query:  343 QPISSRKPDA------VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648
            +P+SS  P        +C +CGDR+SGKHYGV SC+GC+GFFKR+VR++L Y C+++  C VD  +RN+CQ CR++KCL++ M R+ VQ ER  RS   +R   KE D
Sbjct:  117 KPLSSHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQ-RSVQEERQRNKERD 223          
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: nr2f2 (nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252])

HSP 1 Score: 120.168 bits (300), Expect = 7.232e-29
Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ +  CP+D   RNQCQ CR KKCL V M R+AVQ  R P +  H   + + +  NG   H          SYL+ ++ L  +   P+PTS
Sbjct:   87 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPH---HGQFALTNGDPLH--------CHSYLSGYISLLLRAE-PYPTS 202          
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:100491500])

HSP 1 Score: 136.346 bits (342), Expect = 1.195e-34
Identity = 73/152 (48.03%), Postives = 89/152 (58.55%), Query Frame = 1
Query:  352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789
            +SR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   C VD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++      +   +ING   H P        + L    F T       P +++  AI T P
Sbjct:    8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCLVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEINGSTPHFP-------SAALPAPTFFTTVSQLE-PHNLELTAISTTP 151          
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:100491500])

HSP 1 Score: 134.42 bits (337), Expect = 7.057e-34
Identity = 71/147 (48.30%), Postives = 86/147 (58.50%), Query Frame = 1
Query:  367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789
            D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   C VD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++      +   +ING   H P        + L    F T       P +++  AI T P
Sbjct:   24 DIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCLVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEINGSTPHFP-------SAALPAPTFFTTVSQLE-PHNLELTAISTTP 162          
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:100491500])

HSP 1 Score: 134.035 bits (336), Expect = 8.046e-34
Identity = 71/147 (48.30%), Postives = 86/147 (58.50%), Query Frame = 1
Query:  367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789
            D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   C VD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++      +   +ING   H P        + L    F T       P +++  AI T P
Sbjct:   23 DIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCLVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEINGSTPHFP-------SAALPAPTFFTTVSQLE-PHNLELTAISTTP 161          
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: nr2e3 (nuclear receptor subfamily 2 group E member 3 [Source:NCBI gene;Acc:100036597])

HSP 1 Score: 131.339 bits (329), Expect = 1.099e-32
Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 1
Query:  346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTH 669
            P  +  P  +CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+  + +CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS    R +  + D +    H
Sbjct:   27 PGPAPNPLLLCRVCGDSSSGKHYGIFACNGCSGFFKRSVRRKLIYRCQAGTGLCPVDKAHRNQCQACRLKKCLQTGMNKDAVQNERQPRSTAQIRLDSIDLDTDSRSEH 135          
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: nr2e3 (nuclear receptor subfamily 2 group E member 3 [Source:NCBI gene;Acc:100036597])

HSP 1 Score: 130.954 bits (328), Expect = 1.129e-32
Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 1
Query:  346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTH 669
            P  +  P  +CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+  + +CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS    R +  + D +    H
Sbjct:   21 PGPAPNPLLLCRVCGDSSSGKHYGIFACNGCSGFFKRSVRRKLIYRCQAGTGLCPVDKAHRNQCQACRLKKCLQTGMNKDAVQNERQPRSTAQIRLDSIDLDTDSRSEH 129          
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Nr2e1 (nuclear receptor subfamily 2, group E, member 1 [Source:MGI Symbol;Acc:MGI:1100526])

HSP 1 Score: 137.887 bits (346), Expect = 2.651e-35
Identity = 70/135 (51.85%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSY-----------NHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNH 717
            +SR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+             HK DN   +      T  P    F   + L  H
Sbjct:    8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEDNGAAAHFP--STALPAPAFFTAVTQLEPH 140          
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Nr2e3 (nuclear receptor subfamily 2, group E, member 3 [Source:MGI Symbol;Acc:MGI:1346317])

HSP 1 Score: 124.405 bits (311), Expect = 1.628e-30
Identity = 57/93 (61.29%), Postives = 68/93 (73.12%), Query Frame = 1
Query:  337 LAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCK-ESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRS 612
            L +  +   P   CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+  + +CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS
Sbjct:   27 LGEDPTGVGPSLQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRS 119          
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Nr2f2 (nuclear receptor subfamily 2, group F, member 2 [Source:MGI Symbol;Acc:MGI:1352452])

HSP 1 Score: 118.242 bits (295), Expect = 3.388e-28
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLS----FDVFSYLNNHVFLTQKKSFPFPTS 759
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ +  CP+D   RNQCQ CR KKCL V M R+AVQ  R P +                 TH   +L+     +  SYL+ ++ L  +   P+PTS
Sbjct:   79 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPT---------------QPTHGQFALTNGDPLNCHSYLSGYISLLLRAE-PYPTS 194          
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Rxra (retinoid X receptor alpha [Source:MGI Symbol;Acc:MGI:98214])

HSP 1 Score: 113.62 bits (283), Expect = 3.089e-27
Identity = 44/76 (57.89%), Postives = 63/76 (82.89%), Query Frame = 1
Query:  373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHER 600
            +C +CGDR+SGKHYGV SC+GC+GFFKR+VR++L Y C+++  C +D  +RN+CQ CR++KCL++ M R+AVQ ER
Sbjct:  111 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEER 186          
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Nr2f1 (nuclear receptor subfamily 2, group F, member 1 [Source:MGI Symbol;Acc:MGI:1352451])

HSP 1 Score: 115.161 bits (287), Expect = 3.651e-27
Identity = 59/133 (44.36%), Postives = 73/133 (54.89%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSF-----PFPTS 759
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ +  CP+D   RNQCQ CR KKCL V M R+AVQ  R P +                   NP   +      LN H +L+   S      P+PTS
Sbjct:   83 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPT-----------------QPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTS 198          
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|Q9Y466|NR2E1_HUMAN (Nuclear receptor subfamily 2 group E member 1 OS=Homo sapiens OX=9606 GN=NR2E1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.360e-35
Identity = 73/148 (49.32%), Postives = 89/148 (60.14%), Query Frame = 1
Query:  352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789
            +SR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++  Q      G+K  N  +  F   + L    F T       P  ++  A+ T P
Sbjct:    8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKEENGAAAHFPS-AALPAPAFFTAVTQLE-PHGLELAAVSTTP 151          
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|Q9YGL3|NR2E1_ORYLA (Nuclear receptor subfamily 2 group E member 1 OS=Oryzias latipes OX=8090 GN=nr2e1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.605e-35
Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 1
Query:  316 TSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLS 681
            TSG  D L    SSR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  Y+CK  +   CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++      +   ++NG  TH P S
Sbjct:    8 TSGCLDIL-NVKSSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRIYLCKSGSQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEVNGSSTHFPGS 134          
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|P70052|NR2E1_XENLA (Nuclear receptor subfamily 2 group E member 1 OS=Xenopus laevis OX=8355 GN=nr2e1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.204e-35
Identity = 73/148 (49.32%), Postives = 91/148 (61.49%), Query Frame = 1
Query:  352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789
            +SR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++  Q      G+K  N  +  F   + L    F T  +      +++  AI T+P
Sbjct:    8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKEVNGSTQHFSS-TALPTPTFFTTVRQLE-AHNLELAAISTVP 151          
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|Q64104|NR2E1_MOUSE (Nuclear receptor subfamily 2 group E member 1 OS=Mus musculus OX=10090 GN=Nr2e1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.854e-34
Identity = 70/135 (51.85%), Postives = 80/135 (59.26%), Query Frame = 1
Query:  352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSY-----------NHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNH 717
            +SR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+             HK DN   +      T  P    F   + L  H
Sbjct:    8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEDNGAAAHFP--STALPAPAFFTAVTQLEPH 140          
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|Q91379|NR2E1_CHICK (Nuclear receptor subfamily 2 group E member 1 OS=Gallus gallus OX=9031 GN=NR2E1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.494e-34
Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 1
Query:  352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRS 612
            +SR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK  N   CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+
Sbjct:    8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRT 96          
BLAST of Nuclear receptor vs. TrEMBL
Match: A0A210PIB4 (Nuclear receptor subfamily 2 group E member 1 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT04311 PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.388e-46
Identity = 78/99 (78.79%), Postives = 87/99 (87.88%), Query Frame = 1
Query:  352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648
            SSRKP+ +C VCGD+ASGKHYGV SCDGCRGFFKRS+RRNLEYVCKE+  C VDVARRNQCQACRFKKCL VKMN+DAVQHERAPR Y +KRD ++  D
Sbjct:   16 SSRKPEVMCLVCGDKASGKHYGVQSCDGCRGFFKRSIRRNLEYVCKENRNCIVDVARRNQCQACRFKKCLDVKMNKDAVQHERAPRCYQYKRDTEEIED 114          
BLAST of Nuclear receptor vs. TrEMBL
Match: R7TDB7 (Uncharacterized protein (Fragment) OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_53417 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.685e-44
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1
Query:  337 LAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN 633
            LA     +KP+A+C VCGDRASGKHYGV SCDGCRGFFKRS+RRNL+YVCKE+  C VDVARRNQCQACRFKKCL V MNRDAVQHERAPR Y +KRD+
Sbjct:    2 LATSTGMKKPEALCLVCGDRASGKHYGVQSCDGCRGFFKRSIRRNLDYVCKENGQCVVDVARRNQCQACRFKKCLQVNMNRDAVQHERAPRCYQYKRDS 100          
BLAST of Nuclear receptor vs. TrEMBL
Match: A0A1S3JR22 (nuclear receptor subfamily 2 group E member 1 isoform X2 OS=Lingula unguis OX=7574 GN=LOC106175397 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.675e-43
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 1
Query:  358 RKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN 633
            RKP+ +C VCGD+ASGKHYGV SCDGCRGFFKRS+RRNLEYVCKE+  C VDVARRNQCQACRF+KCL VKMN+DAVQHERAPR Y +KRD+
Sbjct:    6 RKPEVLCLVCGDKASGKHYGVQSCDGCRGFFKRSIRRNLEYVCKENGNCVVDVARRNQCQACRFRKCLEVKMNKDAVQHERAPRCYQYKRDS 97          
BLAST of Nuclear receptor vs. TrEMBL
Match: A0A1S3JS41 (nuclear receptor subfamily 2 group E member 1 isoform X1 OS=Lingula unguis OX=7574 GN=LOC106175397 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.850e-43
Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 1
Query:  358 RKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN 633
            RKP+ +C VCGD+ASGKHYGV SCDGCRGFFKRS+RRNLEYVCKE+  C VDVARRNQCQACRF+KCL VKMN+DAVQHERAPR Y +KRD+
Sbjct:   12 RKPEVLCLVCGDKASGKHYGVQSCDGCRGFFKRSIRRNLEYVCKENGNCVVDVARRNQCQACRFRKCLEVKMNKDAVQHERAPRCYQYKRDS 103          
BLAST of Nuclear receptor vs. TrEMBL
Match: A0A1I8JGR6 (Nuclear receptor domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.324e-42
Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 1
Query:  367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDIN 654
            +A C VCGDRASGKHYGVLSCDGCRGFFKRSVRR+LEYVCKES  CPVDVARRNQCQACR++KCL V MNRDAVQHERAPR   + + +  +S + 
Sbjct:   25 EAQCLVCGDRASGKHYGVLSCDGCRGFFKRSVRRSLEYVCKESGDCPVDVARRNQCQACRYRKCLMVSMNRDAVQHERAPRCLQYSKQDSPDSSLQ 120          
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: nr2e1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:103026242])

HSP 1 Score: 139.428 bits (350), Expect = 7.975e-36
Identity = 75/140 (53.57%), Postives = 85/140 (60.71%), Query Frame = 1
Query:  316 TSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES--NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLT 729
            TSG  D L    SSR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  YVCK      CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++  Q      G+K  N  S  F   S      F T
Sbjct:    8 TSGCLDIL-NVKSSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGTQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKDVNGSSAPFPTASIPGPPFFTT 144          
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: nr2e3 (nuclear receptor subfamily 2 group E member 3 [Source:NCBI gene;Acc:103047484])

HSP 1 Score: 122.094 bits (305), Expect = 1.277e-29
Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:  373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTH 669
            +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+  + +CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS    R +    D++  K H
Sbjct:   45 LCKVCADTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDSL--DVDTEKEH 142          
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: nr2f2 (nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:103029842])

HSP 1 Score: 119.398 bits (298), Expect = 6.841e-29
Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ +  CP+D   RNQCQ CR KKCL V M R+AVQ  R P +  H   + + +  NG   H          SYL+ ++ L  +   P+PTS
Sbjct:   86 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPH---HGQFALTNGDPLH--------CHSYLSGYISLLLRAE-PYPTS 201          
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: nr2f2 (nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:103029842])

HSP 1 Score: 119.783 bits (299), Expect = 7.040e-29
Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ +  CP+D   RNQCQ CR KKCL V M R+AVQ  R P +  H   + + +  NG   H          SYL+ ++ L  +   P+PTS
Sbjct:   86 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPH---HGQFALTNGDPLH--------CHSYLSGYISLLLRAE-PYPTS 201          
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: rxrba (retinoid x receptor, beta a [Source:NCBI gene;Acc:30530])

HSP 1 Score: 118.242 bits (295), Expect = 2.714e-28
Identity = 53/107 (49.53%), Postives = 75/107 (70.09%), Query Frame = 1
Query:  343 QPISSRKPDA------VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKES 645
            +P+S   P        +C +CGDR+SGKHYGV SC+GC+GFFKR+VR++L Y C+++  C VD  +RN+CQ CR++KCL++ M R+AVQ E   R  N +RD + ES
Sbjct:   75 KPLSGHSPGPTLSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECMVDKRQRNRCQYCRYQKCLAMGMKREAVQEE---RQRNKERDGEVES 178          
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: nr2e3 (nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63])

HSP 1 Score: 119.013 bits (297), Expect = 3.202e-29
Identity = 56/97 (57.73%), Postives = 66/97 (68.04%), Query Frame = 1
Query:  373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES-NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGY 660
             C VCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+ S  +C VD A RNQCQACR +KCL   MN+DAVQ+ER PRS    R    E   N +
Sbjct:   50 TCLVCGDVSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQASTGLCTVDKAHRNQCQACRLRKCLHAGMNKDAVQNERQPRSTAQVRPGDPELGANTW 146          
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: nr1d2a (nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1])

HSP 1 Score: 103.605 bits (257), Expect = 1.472e-23
Identity = 45/80 (56.25%), Postives = 64/80 (80.00%), Query Frame = 1
Query:  373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEY-VCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609
            +C+VCGD ASG HYGV +C+GC+GFF+RS+++N++Y  C ++  CP+  A RN+CQ CRFKKCLSV M++DAV+  R P+
Sbjct:  121 LCKVCGDAASGFHYGVHACEGCKGFFRRSIQQNIKYKPCLKNETCPIVRANRNRCQHCRFKKCLSVGMSKDAVRFGRIPK 200          
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006803.1 (pep scaffold:Pmarinus_7.0:GL479639:153667:156574:-1 gene:ENSPMAG00000006138.1 transcript:ENSPMAT00000006803.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 96.2857 bits (238), Expect = 2.731e-23
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 1
Query:  364 PDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRD 582
            P   C VCGDRASG+HYG +SC+GC+GFFKRSVR+NL+Y C+ S  C ++   RN+CQ CR +KC +V M  +
Sbjct:  123 PVEFCVVCGDRASGRHYGAVSCEGCKGFFKRSVRKNLKYTCRGSQDCVINKHHRNRCQYCRLQKCFNVGMKTE 195          
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: hnf4g (hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100])

HSP 1 Score: 98.9821 bits (245), Expect = 1.796e-22
Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  370 AVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSY-NHKRDNQKESDINGYKTHNPLSLSF 690
            + C +CGDRA+GKHYG  SCDGC+GFF+RS+R+N  Y C+ S  C VD  +RNQC+  R KKC    M ++AVQ+ER   S   + +D+     IN +     LS  F
Sbjct:   61 SFCAICGDRATGKHYGASSCDGCKGFFRRSIRKNHMYSCRYSRQCVVDKDKRNQCRY-RLKKCFRAGMKKEAVQNERDRISTRRNSQDDATSPSINTFVQAESLSRQF 167          
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: thrb (thyroid hormone receptor beta [Source:NCBI gene;Acc:30607])

HSP 1 Score: 96.2857 bits (238), Expect = 1.081e-21
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLE--YVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHER 600
            C VCGD+A+G HY  ++C+GC+GFF+R+++++L   YVCK S  C VD   RNQCQ CRFKKCL+V M  D V  +R
Sbjct:   12 CAVCGDKATGYHYHCITCEGCKGFFRRTIQKSLHVMYVCKFSETCTVDRINRNQCQECRFKKCLAVGMVTDLVLDDR 88          
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO42936 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S012])

HSP 1 Score: 154.836 bits (390), Expect = 3.363e-42
Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQ 636
            CRVCGDRASGKHYGV++CDGCRGFFKRSVRRNL Y CKE N CP+DVARRNQCQACR +KC  + MNRDAVQHERAPR+   ++++Q
Sbjct:    4 CRVCGDRASGKHYGVMTCDGCRGFFKRSVRRNLAYQCKEKNDCPIDVARRNQCQACRLRKCFEMNMNRDAVQHERAPRTSQIRQNSQ 90          
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO32715 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUB6])

HSP 1 Score: 143.28 bits (360), Expect = 2.230e-38
Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 1
Query:  379 RVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRS 612
            RVCGDR+SGKHYGV +CDGCRGFFKRS+RRNL Y CKE   C VDVARRNQCQACR KKC  V+MN+DAVQHERAPRS
Sbjct:    2 RVCGDRSSGKHYGVFTCDGCRGFFKRSIRRNLTYHCKELGKCVVDVARRNQCQACRLKKCFEVQMNKDAVQHERAPRS 79          
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO38323 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SD90])

HSP 1 Score: 127.872 bits (320), Expect = 1.395e-32
Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 1
Query:  355 SRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNV---CPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKR 627
             R  D  C+VCGDR+SGKHYG+ +CDGC GFFKRS+RRN  Y C+ +N    CPVD   RNQC++CR KKC  V MN+DAVQHER PRS   ++
Sbjct:    1 GRLLDIPCKVCGDRSSGKHYGIYACDGCSGFFKRSIRRNRSYTCRATNGKGNCPVDKIHRNQCRSCRLKKCFDVSMNKDAVQHERGPRSSTLRK 94          
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO38322 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SD88])

HSP 1 Score: 127.102 bits (318), Expect = 1.758e-32
Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 1
Query:  358 RKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSL 684
            +K + +C+VCGD +SG+HYGV +CDGC GFF RSVRR++ Y CK +  C VD  RRNQCQACRFKKCL VKMNR AVQ ER P S    + +  E  + G       SL
Sbjct:    3 KKQEILCKVCGDISSGRHYGVYTCDGCSGFFMRSVRRDMVYTCKGNGGCTVDKKRRNQCQACRFKKCLEVKMNRFAVQQERQPNSTRVMKPHLDEYGLKGLNNEFLASL 111          
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO37645 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SF49])

HSP 1 Score: 124.405 bits (311), Expect = 3.353e-31
Identity = 68/150 (45.33%), Postives = 86/150 (57.33%), Query Frame = 1
Query:  313 LTSGAFDELAQPISSRKPDAV-CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759
            +T+   D    P  S K   V C VCGD++SGKHYGV +C+GC+ FFKRSVRRNL Y C+ S  CP+D   RNQCQ CR KKCL V M R+AVQ  R P +    + N     ING  + N         SYL+  + L  +   P+PT+
Sbjct:    6 VTTWTRDSTETPEDSEKNVQVECAVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLTYTCRASRDCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRIPAAQTPTQ-NAALPGINGDGSTNG-------HSYLSGFIALLLRAE-PYPTT 146          
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: nr2e1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:100049530])

HSP 1 Score: 141.354 bits (355), Expect = 1.607e-36
Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 1
Query:  316 TSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLS 681
            TSG  D L    SSR  D  C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN  Y+CK  +   CPVD   RNQC+ACR KKCL V MN+DAVQHER PR+   ++      +   ++NG  TH P S
Sbjct:    8 TSGCLDIL-NVKSSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYLCKSGSQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEVNGSSTHFPGS 134          
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: nr2e3 (photoreceptor-specific nuclear receptor [Source:NCBI gene;Acc:101164305])

HSP 1 Score: 130.183 bits (326), Expect = 7.397e-33
Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 1
Query:  307 VLLTSGAFDELAQ--PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNH 621
            + +T    D LA+  P   R PD +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+  +  CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS  H
Sbjct:    3 IWITVMTADVLAEKSPRKGRGPDVLCKVCSDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGRCPVDKAHRNQCQACRLKKCLQSGMNKDAVQNERQPRSTAH 110          
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: nr2e3 (photoreceptor-specific nuclear receptor [Source:NCBI gene;Acc:101164305])

HSP 1 Score: 128.257 bits (321), Expect = 8.586e-32
Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 1
Query:  346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNH 621
            P   R PD +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+  +  CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS  H
Sbjct:   31 PRKGRGPDVLCKVCSDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGRCPVDKAHRNQCQACRLKKCLQSGMNKDAVQNERQPRSTAH 123          
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: NR2E3 (photoreceptor-specific nuclear receptor-like [Source:NCBI gene;Acc:101156874])

HSP 1 Score: 127.872 bits (320), Expect = 1.563e-31
Identity = 59/102 (57.84%), Postives = 72/102 (70.59%), Query Frame = 1
Query:  346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648
            P  +  P  VC+VCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+  + +CPVD A RNQCQACR KKCL   MN+DAVQ+ER PRS    R +  + D
Sbjct:   36 PGKALSPALVCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDSIDVD 137          
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: nr2f2 (COUP transcription factor 2 [Source:NCBI gene;Acc:101172490])

HSP 1 Score: 122.865 bits (307), Expect = 4.906e-30
Identity = 63/139 (45.32%), Postives = 84/139 (60.43%), Query Frame = 1
Query:  346 PISSRKPDAV-CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759
            P S ++P  + C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ +  CP+D   RNQCQ CR KKCL V M R+AVQ  R P +  H   + + +  NG   H          SYL+ ++ L  +   P+PTS
Sbjct:   53 PQSEKQPQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRVPPTQPH---HGQFALTNGDPLH--------CHSYLSGYISLLLRAE-PYPTS 179          
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000076268.1 (SMESG000076268.1)

HSP 1 Score: 785.408 bits (2027), Expect = 0.000e+0
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1
Query:  277 MASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIPLASDKIHPKSMGTSSFNLNCQMNCNRMLSSFDYRKSSELQKLRDEMIRARIAVNRAFFCHPSSTILEKSQIIEEKSKFAELMTNQIMNLMHSQLASTLHQMSWGKEAYHIFGNRSMIRPWHDKICASEQGIIDKCIIEGKKIALIEMTIKDYLIINQKNQNIITDPIARSSIHRLWPVLLTLKIYQQGMSLPDMSTEPSNAD 1395
            MASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIPLASDKIHPKSMGTSSFNLNCQMNCNRMLSSFDYRKSSELQKLRDEMIRARIAVNRAFFCHPSSTILEKSQIIEEKSKFAELMTNQIMNLMHSQLASTLHQMSWGKEAYHIFGNRSMIRPWHDKICASEQGIIDKCIIEGKKIALIEMTIKDYLIINQKNQNIITDPIARSSIHRLWPVLLTLKIYQQGMSLPDMSTEPSNAD
Sbjct:    1 MASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIPLASDKIHPKSMGTSSFNLNCQMNCNRMLSSFDYRKSSELQKLRDEMIRARIAVNRAFFCHPSSTILEKSQIIEEKSKFAELMTNQIMNLMHSQLASTLHQMSWGKEAYHIFGNRSMIRPWHDKICASEQGIIDKCIIEGKKIALIEMTIKDYLIINQKNQNIITDPIARSSIHRLWPVLLTLKIYQQGMSLPDMSTEPSNAD 373          

HSP 2 Score: 218.779 bits (556), Expect = 0.000e+0
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 2
Query: 1394 MEQLMETFNKIKFIRPLNEEIQSLFNLIIMHDLSQMSPEPLKFAYQEKLSKCVNQAMKNPAYQKILNLAMYLIQTIFTVKKSFLQNIFLPYSMDLDKILDKFFNRNA 1714
            MEQLMETFNKIKFIRPLNEEIQSLFNLIIMHDLSQMSPEPLKFAYQEKLSKCVNQAMKNPAYQKILNLAMYLIQTIFTVKKSFLQNIFLPYSMDLDKILDKFFNRNA
Sbjct:  374 MEQLMETFNKIKFIRPLNEEIQSLFNLIIMHDLSQMSPEPLKFAYQEKLSKCVNQAMKNPAYQKILNLAMYLIQTIFTVKKSFLQNIFLPYSMDLDKILDKFFNRNA 480          
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000078919.1 (SMESG000078919.1)

HSP 1 Score: 120.553 bits (301), Expect = 1.369e-28
Identity = 57/99 (57.58%), Postives = 71/99 (71.72%), Query Frame = 1
Query:  340 AQPISSRKPDAVC-RVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRD 630
             QPI S     +C  VCGD +SGKHYG+L+C+GC GFFKRSVRR L Y C+  +  C +D A RNQCQACR KKCL + MN+DAVQ+ER PR+ +  R+
Sbjct:  105 GQPIKSSMLHGLCCVVCGDVSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCTIDKAHRNQCQACRLKKCLLMGMNKDAVQNERQPRNSSQIRN 203          
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000078919.1 (SMESG000078919.1)

HSP 1 Score: 120.168 bits (300), Expect = 1.464e-28
Identity = 57/99 (57.58%), Postives = 71/99 (71.72%), Query Frame = 1
Query:  340 AQPISSRKPDAVC-RVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRD 630
             QPI S     +C  VCGD +SGKHYG+L+C+GC GFFKRSVRR L Y C+  +  C +D A RNQCQACR KKCL + MN+DAVQ+ER PR+ +  R+
Sbjct:  104 GQPIKSSMLHGLCCVVCGDVSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCTIDKAHRNQCQACRLKKCLLMGMNKDAVQNERQPRNSSQIRN 202          
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000056421.1 (SMESG000056421.1)

HSP 1 Score: 117.087 bits (292), Expect = 1.172e-27
Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 1
Query:  376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNH 621
            C VCGD++SGKHYG  +C+GC+ FFKRSVRRNL Y C+ ++ CP+D+  RNQCQ CRF+KCL + M ++AVQ  R P+  +H
Sbjct:  112 CVVCGDKSSGKHYGQYTCEGCKSFFKRSVRRNLTYSCRGNHNCPIDIHHRNQCQNCRFQKCLKMGMRKEAVQQGRIPQFSSH 193          
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000019911.1 (SMESG000019911.1)

HSP 1 Score: 114.005 bits (284), Expect = 1.550e-26
Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 1
Query:  280 ASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERA 603
            ++NE+L+ D   +S   + LA   SS     +C +C D A+GKHYGVL+C+GC+GFFKR++R+ L Y C+E N+CP+    RN+CQ+CRF KCL   M  +AVQ ER+
Sbjct:  146 SANENLSIDSSQSSYTNNSLAAAPSSHY--DLCAICTDLATGKHYGVLACEGCKGFFKRTIRKELHYTCREKNMCPITERLRNRCQSCRFNKCLDQGMKIEAVQRERS 251          
The following BLAST results are available for this feature:
BLAST of Nuclear receptor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
NR2E14.914e-3649.32nuclear receptor subfamily 2 group E member 1 [Sou... [more]
NR2E13.021e-3546.91nuclear receptor subfamily 2 group E member 1 [Sou... [more]
NR2E39.976e-3156.19nuclear receptor subfamily 2 group E member 3 [Sou... [more]
NR2E31.633e-3056.19nuclear receptor subfamily 2 group E member 3 [Sou... [more]
NR2F24.935e-2844.70nuclear receptor subfamily 2 group F member 2 [Sou... [more]
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BLAST of Nuclear receptor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nhr-2364.179e-3781.33Nuclear Hormone Receptor family [Source:UniProtKB... [more]
nhr-679.928e-3052.83Nuclear hormone receptor family member nhr-67 [So... [more]
fax-13.890e-2961.80Nuclear hormone receptor FAX-1 [Source:UniProtKB/... [more]
fax-11.065e-2861.80Nuclear hormone receptor FAX-1 [Source:UniProtKB/... [more]
nhr-2392.226e-2647.11Nuclear Hormone Receptor family [Source:UniProtKB... [more]
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BLAST of Nuclear receptor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
svp1.881e-2945.26gene:FBgn0003651 transcript:FBtr0331183[more]
svp2.105e-2945.26gene:FBgn0003651 transcript:FBtr0082564[more]
svp3.224e-2945.26gene:FBgn0003651 transcript:FBtr0082563[more]
dsf5.456e-2962.35gene:FBgn0015381 transcript:FBtr0333245[more]
dsf5.456e-2962.35gene:FBgn0015381 transcript:FBtr0079145[more]
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BLAST of Nuclear receptor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nr2e11.188e-3656.35nuclear receptor subfamily 2, group E, member 1 [S... [more]
nr2e32.074e-2959.14nuclear receptor subfamily 2, group E, member 3 [S... [more]
nr2e32.436e-2959.14nuclear receptor subfamily 2, group E, member 3 [S... [more]
rxrba3.981e-2950.00retinoid x receptor, beta a [Source:NCBI gene;Acc:... [more]
nr2f27.232e-2946.88nuclear receptor subfamily 2, group F, member 2 [S... [more]
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BLAST of Nuclear receptor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
NR2E11.195e-3448.03nuclear receptor subfamily 2 group E member 1 [Sou... [more]
NR2E17.057e-3448.30nuclear receptor subfamily 2 group E member 1 [Sou... [more]
NR2E18.046e-3448.30nuclear receptor subfamily 2 group E member 1 [Sou... [more]
nr2e31.099e-3255.05nuclear receptor subfamily 2 group E member 3 [Sou... [more]
nr2e31.129e-3255.05nuclear receptor subfamily 2 group E member 3 [Sou... [more]
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BLAST of Nuclear receptor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Nr2e12.651e-3551.85nuclear receptor subfamily 2, group E, member 1 [S... [more]
Nr2e31.628e-3061.29nuclear receptor subfamily 2, group E, member 3 [S... [more]
Nr2f23.388e-2844.70nuclear receptor subfamily 2, group F, member 2 [S... [more]
Rxra3.089e-2757.89retinoid X receptor alpha [Source:MGI Symbol;Acc:M... [more]
Nr2f13.651e-2744.36nuclear receptor subfamily 2, group F, member 1 [S... [more]
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BLAST of Nuclear receptor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9Y466|NR2E1_HUMAN2.360e-3549.32Nuclear receptor subfamily 2 group E member 1 OS=H... [more]
sp|Q9YGL3|NR2E1_ORYLA3.605e-3555.47Nuclear receptor subfamily 2 group E member 1 OS=O... [more]
sp|P70052|NR2E1_XENLA9.204e-3549.32Nuclear receptor subfamily 2 group E member 1 OS=X... [more]
sp|Q64104|NR2E1_MOUSE1.854e-3451.85Nuclear receptor subfamily 2 group E member 1 OS=M... [more]
sp|Q91379|NR2E1_CHICK7.494e-3468.54Nuclear receptor subfamily 2 group E member 1 OS=G... [more]
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BLAST of Nuclear receptor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A210PIB44.388e-4678.79Nuclear receptor subfamily 2 group E member 1 OS=M... [more]
R7TDB72.685e-4477.78Uncharacterized protein (Fragment) OS=Capitella te... [more]
A0A1S3JR221.675e-4380.43nuclear receptor subfamily 2 group E member 1 isof... [more]
A0A1S3JS411.850e-4380.43nuclear receptor subfamily 2 group E member 1 isof... [more]
A0A1I8JGR63.324e-4275.00Nuclear receptor domain-containing protein OS=Macr... [more]
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BLAST of Nuclear receptor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nr2e17.975e-3653.57nuclear receptor subfamily 2 group E member 1 [Sou... [more]
nr2e31.277e-2957.00nuclear receptor subfamily 2 group E member 3 [Sou... [more]
nr2f26.841e-2946.88nuclear receptor subfamily 2 group F member 2 [Sou... [more]
nr2f27.040e-2946.88nuclear receptor subfamily 2 group F member 2 [Sou... [more]
rxrba2.714e-2849.53retinoid x receptor, beta a [Source:NCBI gene;Acc:... [more]
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BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nr2e33.202e-2957.73nuclear receptor subfamily 2, group E, member 3 [S... [more]
nr1d2a1.472e-2356.25nuclear receptor subfamily 1, group D, member 2a [... [more]
ENSPMAT00000006803.12.731e-2356.16pep scaffold:Pmarinus_7.0:GL479639:153667:156574:-... [more]
hnf4g1.796e-2246.30hepatocyte nuclear factor 4, gamma [Source:ZFIN;Ac... [more]
thrb1.081e-2154.55thyroid hormone receptor beta [Source:NCBI gene;Ac... [more]
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BLAST of Nuclear receptor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Nuclear receptor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO429363.363e-4275.86Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO327152.230e-3880.77Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO383231.395e-3259.57Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO383221.758e-3255.05Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO376453.353e-3145.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Nuclear receptor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
nr2e11.607e-3655.47nuclear receptor subfamily 2 group E member 1 [Sou... [more]
nr2e37.397e-3357.41photoreceptor-specific nuclear receptor [Source:NC... [more]
nr2e38.586e-3262.37photoreceptor-specific nuclear receptor [Source:NC... [more]
NR2E31.563e-3157.84photoreceptor-specific nuclear receptor-like [Sour... [more]
nr2f24.906e-3045.32COUP transcription factor 2 [Source:NCBI gene;Acc:... [more]
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BLAST of Nuclear receptor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000076268.10.000e+0100.00SMESG000076268.1[more]
SMESG000078919.11.369e-2857.58SMESG000078919.1[more]
SMESG000078919.11.464e-2857.58SMESG000078919.1[more]
SMESG000056421.11.172e-2757.32SMESG000056421.1[more]
SMESG000019911.11.550e-2648.15SMESG000019911.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30028766 ID=SMED30028766|Name=Nuclear receptor|organism=Schmidtea mediterranea sexual|type=transcript|length=1718bp
CCCCAGCCCAGCCCCACCAATTCCAATATTGATGTGACCAGAAAAATATT
TATTTCTGGAATAAAAAGTTCTCAAAAACGTTTCCCAATTCCGAATCCGA
TCAAAACTGATGATGATTTTGCTATTGGTTTGTTTAACGTTATTATTGGA
TGTGAGAGCTGGCAAACCGCCCCAATGCGACTCGCTGCAGCTGTCGGATT
CCCACCGTCAGACATCTCAATTTAAGATATCAAGAAATATTTTCTTTCAT
TTTTCCAAATACGTAGAATTTAATACATGGCTTCGAATGAATCTTTAAAC
TGCGACGTCCTGTTGACCTCTGGGGCTTTTGATGAATTAGCCCAACCCAT
CTCATCGAGGAAACCAGATGCCGTTTGTAGAGTTTGTGGAGACCGAGCCA
GTGGGAAACATTATGGAGTTTTGTCTTGCGACGGATGTCGAGGATTCTTC
AAACGAAGTGTAAGGCGAAATTTAGAATATGTTTGCAAAGAGTCAAATGT
TTGTCCAGTTGACGTCGCTCGCCGCAACCAGTGCCAAGCCTGCCGGTTCA
AGAAATGTTTATCAGTAAAAATGAACCGTGATGCTGTCCAGCATGAGAGA
GCGCCTCGATCCTATAATCACAAAAGAGACAATCAAAAAGAATCCGACAT
AAACGGATACAAAACGCATAATCCTCTTTCTTTGAGTTTTGATGTTTTCA
GTTATTTAAATAATCATGTTTTTCTAACACAAAAAAAATCTTTTCCCTTT
CCGACTTCCATCGATGCGGAAGCCATTCAAACTATTCCGCTGGCTTCGGA
TAAAATTCATCCAAAATCCATGGGAACTTCTTCGTTCAATCTTAACTGTC
AAATGAACTGCAACAGGATGTTATCGTCGTTTGATTACCGAAAGAGTTCC
GAATTGCAAAAGCTTCGCGATGAAATGATCAGAGCACGAATTGCGGTGAA
TCGGGCCTTTTTTTGTCACCCTTCGTCAACAATTCTAGAAAAGTCCCAAA
TCATAGAGGAAAAATCCAAATTTGCCGAGTTGATGACAAATCAGATCATG
AATTTGATGCATTCTCAGCTTGCGTCGACATTGCATCAAATGTCATGGGG
AAAAGAGGCTTATCATATTTTTGGTAATCGCAGCATGATACGGCCTTGGC
ACGATAAGATCTGCGCATCAGAACAAGGAATCATAGACAAATGTATTATC
GAAGGCAAGAAAATTGCCCTGATTGAGATGACAATAAAGGACTATTTAAT
TATCAATCAAAAGAATCAAAACATTATCACGGACCCCATTGCAAGGAGCA
GCATTCATAGGTTATGGCCTGTTCTTCTTACCTTGAAGATCTACCAACAA
GGAATGTCGCTGCCTGACATGTCGACAGAGCCATCAAATGCCGATGGAAC
AGTTAATGGAGACCTTCAACAAAATCAAATTTATCCGACCATTAAACGAA
GAAATCCAGTCCTTGTTCAATTTGATAATCATGCATGACCTCTCACAAAT
GTCACCTGAACCCTTGAAGTTTGCTTACCAAGAAAAACTCTCGAAATGCG
TCAATCAGGCAATGAAAAATCCAGCGTATCAAAAAATATTAAACTTGGCA
ATGTATCTCATTCAAACAATTTTCACAGTCAAGAAATCCTTTCTGCAAAA
CATATTTTTACCATATTCCATGGATTTGGATAAAATTTTGGATAAATTTT
TCAATCGTAATGCCTGAC
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protein sequence of SMED30028766-orf-1

>SMED30028766-orf-1 ID=SMED30028766-orf-1|Name=SMED30028766-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=404bp
MASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLS
CDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMN
RDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFL
TQKKSFPFPTSIDAEAIQTIPLASDKIHPKSMGTSSFNLNCQMNCNRMLS
SFDYRKSSELQKLRDEMIRARIAVNRAFFCHPSSTILEKSQIIEEKSKFA
ELMTNQIMNLMHSQLASTLHQMSWGKEAYHIFGNRSMIRPWHDKICASEQ
GIIDKCIIEGKKIALIEMTIKDYLIINQKNQNIITDPIARSSIHRLWPVL
LTLKIYQQGMSLPDMSTEPSNADGTVNGDLQQNQIYPTIKRRNPVLVQFD
NHA*
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protein sequence of SMED30028766-orf-2

>SMED30028766-orf-2 ID=SMED30028766-orf-2|Name=SMED30028766-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=110bp
MPMEQLMETFNKIKFIRPLNEEIQSLFNLIIMHDLSQMSPEPLKFAYQEK
LSKCVNQAMKNPAYQKILNLAMYLIQTIFTVKKSFLQNIFLPYSMDLDKI
LDKFFNRNA*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR001628Znf_hrmn_rcpt
IPR000536Nucl_hrmn_rcpt_lig-bd
IPR013088Znf_NHR/GATA
Vocabulary: molecular function
TermDefinition
GO:0008270zinc ion binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
GO:0003677DNA binding
GO:0003707steroid hormone receptor activity
GO:0046872metal ion binding
Vocabulary: biological process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0043401steroid hormone mediated signaling pathway
GO:0006351transcription, DNA-templated