Nuclear receptor
Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30028766 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:HGNC Symbol;Acc:HGNC:7973]) HSP 1 Score: 140.198 bits (352), Expect = 4.914e-36 Identity = 73/148 (49.32%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789 +SR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ Q G+K N + F + L F T P ++ A+ T P Sbjct: 8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKEENGAAAHFPS-AALPAPAFFTAVTQLE-PHGLELAAVSTTP 151
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:HGNC Symbol;Acc:HGNC:7973]) HSP 1 Score: 139.043 bits (349), Expect = 3.021e-35 Identity = 76/162 (46.91%), Postives = 93/162 (57.41%), Query Frame = 1 Query: 313 LTSG-AFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789 L SG + L + R D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ Q G+K N + F + L F T P ++ A+ T P Sbjct: 31 LGSGLPWPSLLESPGGRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKEENGAAAHFPS-AALPAPAFFTAVTQLE-PHGLELAAVSTTP 188
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2E3 (nuclear receptor subfamily 2 group E member 3 [Source:HGNC Symbol;Acc:HGNC:7974]) HSP 1 Score: 124.79 bits (312), Expect = 9.976e-31 Identity = 59/105 (56.19%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 337 LAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCK-ESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648 L + + P CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + +CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS + ES+ Sbjct: 34 LGEDPTGVSPSLQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESN 138
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2E3 (nuclear receptor subfamily 2 group E member 3 [Source:HGNC Symbol;Acc:HGNC:7974]) HSP 1 Score: 125.176 bits (313), Expect = 1.633e-30 Identity = 59/105 (56.19%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 337 LAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCK-ESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648 L + + P CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + +CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS + ES+ Sbjct: 34 LGEDPTGVSPSLQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRSTAQVHLDSMESN 138
BLAST of Nuclear receptor vs. Ensembl Human
Match: NR2F2 (nuclear receptor subfamily 2 group F member 2 [Source:HGNC Symbol;Acc:HGNC:7976]) HSP 1 Score: 118.242 bits (295), Expect = 4.935e-28 Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLS----FDVFSYLNNHVFLTQKKSFPFPTS 759 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ + CP+D RNQCQ CR KKCL V M R+AVQ R P + TH +L+ + SYL+ ++ L + P+PTS Sbjct: 79 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPT---------------QPTHGQFALTNGDPLNCHSYLSGYISLLLRAE-PYPTS 194
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: nhr-236 (Nuclear Hormone Receptor family [Source:UniProtKB/TrEMBL;Acc:Q9N418]) HSP 1 Score: 139.428 bits (350), Expect = 4.179e-37 Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHER 600 CRVCGDRASG+HYGVLSCDGCRGFFKRS+RRNL Y CKES C +DV RRNQCQACRF+KC++V MNR AVQHER Sbjct: 13 CRVCGDRASGRHYGVLSCDGCRGFFKRSIRRNLRYSCKESGDCVIDVTRRNQCQACRFQKCITVAMNRHAVQHER 87
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: nhr-67 (Nuclear hormone receptor family member nhr-67 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVV3]) HSP 1 Score: 121.709 bits (304), Expect = 9.928e-30 Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1 Query: 325 AFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNV-----CPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKR 627 A +++ P S D CRVC D +SGKHY + SCDGC GFFKRS+RR+ +YVCK C VD RNQC+ACR +KCL + MN+DAVQHER PR+ + +R Sbjct: 4 AVSQMSVPSSRILLDVDCRVCEDHSSGKHYSIFSCDGCAGFFKRSIRRHRQYVCKNKGSPSEGQCKVDKTHRNQCRACRLRKCLEIGMNKDAVQHERGPRNSSLRR 109
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: fax-1 (Nuclear hormone receptor FAX-1 [Source:UniProtKB/TrEMBL;Acc:G5EDJ0]) HSP 1 Score: 119.783 bits (299), Expect = 3.890e-29 Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 1 Query: 346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609 P ++ P C VCGD +SGKHYG+L+C+GC GFFKRSVRR L Y C+ + C VD A RNQCQACR KKCL+ MN+DAVQ+ER PR Sbjct: 92 PPTASSPTLCCAVCGDVSSGKHYGILACNGCSGFFKRSVRRRLIYRCQAGTGNCVVDKAHRNQCQACRLKKCLNKGMNKDAVQNERQPR 180
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: fax-1 (Nuclear hormone receptor FAX-1 [Source:UniProtKB/TrEMBL;Acc:G5EDJ0]) HSP 1 Score: 119.013 bits (297), Expect = 1.065e-28 Identity = 55/89 (61.80%), Postives = 66/89 (74.16%), Query Frame = 1 Query: 346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609 P ++ P C VCGD +SGKHYG+L+C+GC GFFKRSVRR L Y C+ + C VD A RNQCQACR KKCL+ MN+DAVQ+ER PR Sbjct: 92 PPTASSPTLCCAVCGDVSSGKHYGILACNGCSGFFKRSVRRRLIYRCQAGTGNCVVDKAHRNQCQACRLKKCLNKGMNKDAVQNERQPR 180
BLAST of Nuclear receptor vs. Ensembl Celegans
Match: nhr-239 (Nuclear Hormone Receptor family [Source:UniProtKB/TrEMBL;Acc:Q9BKZ8]) HSP 1 Score: 108.612 bits (270), Expect = 2.226e-26 Identity = 57/121 (47.11%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNV-CPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQK 735 C +CGD++ G+HYGV +CDGC FFKRSVR+N+ Y C N C VD RRN C ACR KC +KMNR AVQ ER PR + + T+NP+S +D S + V LT K Sbjct: 11 CEICGDKSYGRHYGVWACDGCSCFFKRSVRKNIIYTCIAGNWKCVVDKGRRNWCPACRLAKCTRLKMNRLAVQTERGPR---------RLRCLQLKHTNNPISFKYD--SIFSKSVILTSK 120
BLAST of Nuclear receptor vs. Ensembl Fly
Match: svp (gene:FBgn0003651 transcript:FBtr0331183) HSP 1 Score: 123.25 bits (308), Expect = 1.881e-29 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDI-NGYKTHNPLSLS-FDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQ 780 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ S CP+D RNQCQ CR KKCL + M R+AVQ R P + + I NG +P+ ++ F+ SYL++++ L + P+PTS + +Q Sbjct: 200 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANG----DPMGIAGFNGHSYLSSYISLLLRAE-PYPTSRYGQCMQ 331
BLAST of Nuclear receptor vs. Ensembl Fly
Match: svp (gene:FBgn0003651 transcript:FBtr0082564) HSP 1 Score: 122.865 bits (307), Expect = 2.105e-29 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDI-NGYKTHNPLSLS-FDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQ 780 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ S CP+D RNQCQ CR KKCL + M R+AVQ R P + + I NG +P+ ++ F+ SYL++++ L + P+PTS + +Q Sbjct: 200 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANG----DPMGIAGFNGHSYLSSYISLLLRAE-PYPTSRYGQCMQ 331
BLAST of Nuclear receptor vs. Ensembl Fly
Match: svp (gene:FBgn0003651 transcript:FBtr0082563) HSP 1 Score: 123.635 bits (309), Expect = 3.224e-29 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDI-NGYKTHNPLSLS-FDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQ 780 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ S CP+D RNQCQ CR KKCL + M R+AVQ R P + + I NG +P+ ++ F+ SYL++++ L + P+PTS + +Q Sbjct: 200 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAVQRGRVPPTQPGLAGMHGQYQIANG----DPMGIAGFNGHSYLSSYISLLLRAE-PYPTSRYGQCMQ 331
BLAST of Nuclear receptor vs. Ensembl Fly
Match: dsf (gene:FBgn0015381 transcript:FBtr0333245) HSP 1 Score: 122.479 bits (306), Expect = 5.456e-29 Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES----NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609 D C+VCGDR+SGKHYG+ SCDGC GFFKRS+ RN Y CK + CPVD RNQC+ACR KC MN+DAVQHER PR Sbjct: 10 DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKCFQSAMNKDAVQHERGPR 94
BLAST of Nuclear receptor vs. Ensembl Fly
Match: dsf (gene:FBgn0015381 transcript:FBtr0079145) HSP 1 Score: 122.479 bits (306), Expect = 5.456e-29 Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = 1 Query: 367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES----NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609 D C+VCGDR+SGKHYG+ SCDGC GFFKRS+ RN Y CK + CPVD RNQC+ACR KC MN+DAVQHER PR Sbjct: 10 DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKCFQSAMNKDAVQHERGPR 94
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: nr2e1 (nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]) HSP 1 Score: 141.739 bits (356), Expect = 1.188e-36 Identity = 71/126 (56.35%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 316 TSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES--NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNP 675 TSG D L SSR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ + ++NG TH P Sbjct: 8 TSGCLDILNVK-SSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGTQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEVNGSSTHFP 132
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: nr2e3 (nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]) HSP 1 Score: 121.709 bits (304), Expect = 2.074e-29 Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648 +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + +CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS R + + D Sbjct: 45 LCKVCSDTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDALDVD 137
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: nr2e3 (nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]) HSP 1 Score: 121.324 bits (303), Expect = 2.436e-29 Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648 +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + +CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS R + + D Sbjct: 38 LCKVCSDTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDALDVD 130
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: rxrba (retinoid x receptor, beta a [Source:NCBI gene;Acc:30530]) HSP 1 Score: 117.087 bits (292), Expect = 3.981e-29 Identity = 54/108 (50.00%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 343 QPISSRKPDA------VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648 +P+SS P +C +CGDR+SGKHYGV SC+GC+GFFKR+VR++L Y C+++ C VD +RN+CQ CR++KCL++ M R+ VQ ER RS +R KE D Sbjct: 117 KPLSSHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQ-RSVQEERQRNKERD 223
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Match: nr2f2 (nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]) HSP 1 Score: 120.168 bits (300), Expect = 7.232e-29 Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ + CP+D RNQCQ CR KKCL V M R+AVQ R P + H + + + NG H SYL+ ++ L + P+PTS Sbjct: 87 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPH---HGQFALTNGDPLH--------CHSYLSGYISLLLRAE-PYPTS 202
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:100491500]) HSP 1 Score: 136.346 bits (342), Expect = 1.195e-34 Identity = 73/152 (48.03%), Postives = 89/152 (58.55%), Query Frame = 1 Query: 352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789 +SR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N C VD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ + +ING H P + L F T P +++ AI T P Sbjct: 8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCLVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEINGSTPHFP-------SAALPAPTFFTTVSQLE-PHNLELTAISTTP 151
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:100491500]) HSP 1 Score: 134.42 bits (337), Expect = 7.057e-34 Identity = 71/147 (48.30%), Postives = 86/147 (58.50%), Query Frame = 1 Query: 367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789 D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N C VD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ + +ING H P + L F T P +++ AI T P Sbjct: 24 DIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCLVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEINGSTPHFP-------SAALPAPTFFTTVSQLE-PHNLELTAISTTP 162
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: NR2E1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:100491500]) HSP 1 Score: 134.035 bits (336), Expect = 8.046e-34 Identity = 71/147 (48.30%), Postives = 86/147 (58.50%), Query Frame = 1 Query: 367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789 D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N C VD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ + +ING H P + L F T P +++ AI T P Sbjct: 23 DIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCLVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEINGSTPHFP-------SAALPAPTFFTTVSQLE-PHNLELTAISTTP 161
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: nr2e3 (nuclear receptor subfamily 2 group E member 3 [Source:NCBI gene;Acc:100036597]) HSP 1 Score: 131.339 bits (329), Expect = 1.099e-32 Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTH 669 P + P +CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + +CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS R + + D + H Sbjct: 27 PGPAPNPLLLCRVCGDSSSGKHYGIFACNGCSGFFKRSVRRKLIYRCQAGTGLCPVDKAHRNQCQACRLKKCLQTGMNKDAVQNERQPRSTAQIRLDSIDLDTDSRSEH 135
BLAST of Nuclear receptor vs. Ensembl Xenopus
Match: nr2e3 (nuclear receptor subfamily 2 group E member 3 [Source:NCBI gene;Acc:100036597]) HSP 1 Score: 130.954 bits (328), Expect = 1.129e-32 Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTH 669 P + P +CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + +CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS R + + D + H Sbjct: 21 PGPAPNPLLLCRVCGDSSSGKHYGIFACNGCSGFFKRSVRRKLIYRCQAGTGLCPVDKAHRNQCQACRLKKCLQTGMNKDAVQNERQPRSTAQIRLDSIDLDTDSRSEH 129
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Nr2e1 (nuclear receptor subfamily 2, group E, member 1 [Source:MGI Symbol;Acc:MGI:1100526]) HSP 1 Score: 137.887 bits (346), Expect = 2.651e-35 Identity = 70/135 (51.85%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSY-----------NHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNH 717 +SR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ HK DN + T P F + L H Sbjct: 8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEDNGAAAHFP--STALPAPAFFTAVTQLEPH 140
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Nr2e3 (nuclear receptor subfamily 2, group E, member 3 [Source:MGI Symbol;Acc:MGI:1346317]) HSP 1 Score: 124.405 bits (311), Expect = 1.628e-30 Identity = 57/93 (61.29%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 337 LAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCK-ESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRS 612 L + + P CRVCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + +CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS Sbjct: 27 LGEDPTGVGPSLQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQNERQPRS 119
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Nr2f2 (nuclear receptor subfamily 2, group F, member 2 [Source:MGI Symbol;Acc:MGI:1352452]) HSP 1 Score: 118.242 bits (295), Expect = 3.388e-28 Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLS----FDVFSYLNNHVFLTQKKSFPFPTS 759 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ + CP+D RNQCQ CR KKCL V M R+AVQ R P + TH +L+ + SYL+ ++ L + P+PTS Sbjct: 79 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPT---------------QPTHGQFALTNGDPLNCHSYLSGYISLLLRAE-PYPTS 194
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Rxra (retinoid X receptor alpha [Source:MGI Symbol;Acc:MGI:98214]) HSP 1 Score: 113.62 bits (283), Expect = 3.089e-27 Identity = 44/76 (57.89%), Postives = 63/76 (82.89%), Query Frame = 1 Query: 373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHER 600 +C +CGDR+SGKHYGV SC+GC+GFFKR+VR++L Y C+++ C +D +RN+CQ CR++KCL++ M R+AVQ ER Sbjct: 111 ICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEER 186
BLAST of Nuclear receptor vs. Ensembl Mouse
Match: Nr2f1 (nuclear receptor subfamily 2, group F, member 1 [Source:MGI Symbol;Acc:MGI:1352451]) HSP 1 Score: 115.161 bits (287), Expect = 3.651e-27 Identity = 59/133 (44.36%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSF-----PFPTS 759 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ + CP+D RNQCQ CR KKCL V M R+AVQ R P + NP + LN H +L+ S P+PTS Sbjct: 83 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPT-----------------QPNPGQYALTNGDPLNGHCYLSGYISLLLRAEPYPTS 198
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|Q9Y466|NR2E1_HUMAN (Nuclear receptor subfamily 2 group E member 1 OS=Homo sapiens OX=9606 GN=NR2E1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 2.360e-35 Identity = 73/148 (49.32%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789 +SR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ Q G+K N + F + L F T P ++ A+ T P Sbjct: 8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKEENGAAAHFPS-AALPAPAFFTAVTQLE-PHGLELAAVSTTP 151
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|Q9YGL3|NR2E1_ORYLA (Nuclear receptor subfamily 2 group E member 1 OS=Oryzias latipes OX=8090 GN=nr2e1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.605e-35 Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 316 TSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLS 681 TSG D L SSR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN Y+CK + CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ + ++NG TH P S Sbjct: 8 TSGCLDIL-NVKSSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRIYLCKSGSQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEVNGSSTHFPGS 134
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|P70052|NR2E1_XENLA (Nuclear receptor subfamily 2 group E member 1 OS=Xenopus laevis OX=8355 GN=nr2e1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 9.204e-35 Identity = 73/148 (49.32%), Postives = 91/148 (61.49%), Query Frame = 1 Query: 352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIP 789 +SR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ Q G+K N + F + L F T + +++ AI T+P Sbjct: 8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKEVNGSTQHFSS-TALPTPTFFTTVRQLE-AHNLELAAISTVP 151
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|Q64104|NR2E1_MOUSE (Nuclear receptor subfamily 2 group E member 1 OS=Mus musculus OX=10090 GN=Nr2e1 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.854e-34 Identity = 70/135 (51.85%), Postives = 80/135 (59.26%), Query Frame = 1 Query: 352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSY-----------NHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNH 717 +SR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ HK DN + T P F + L H Sbjct: 8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEDNGAAAHFP--STALPAPAFFTAVTQLEPH 140
BLAST of Nuclear receptor vs. UniProt/SwissProt
Match: sp|Q91379|NR2E1_CHICK (Nuclear receptor subfamily 2 group E member 1 OS=Gallus gallus OX=9031 GN=NR2E1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 7.494e-34 Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 1 Query: 352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRS 612 +SR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK N CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ Sbjct: 8 TSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRT 96
BLAST of Nuclear receptor vs. TrEMBL
Match: A0A210PIB4 (Nuclear receptor subfamily 2 group E member 1 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT04311 PE=4 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.388e-46 Identity = 78/99 (78.79%), Postives = 87/99 (87.88%), Query Frame = 1 Query: 352 SSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648 SSRKP+ +C VCGD+ASGKHYGV SCDGCRGFFKRS+RRNLEYVCKE+ C VDVARRNQCQACRFKKCL VKMN+DAVQHERAPR Y +KRD ++ D Sbjct: 16 SSRKPEVMCLVCGDKASGKHYGVQSCDGCRGFFKRSIRRNLEYVCKENRNCIVDVARRNQCQACRFKKCLDVKMNKDAVQHERAPRCYQYKRDTEEIED 114
BLAST of Nuclear receptor vs. TrEMBL
Match: R7TDB7 (Uncharacterized protein (Fragment) OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_53417 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.685e-44 Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1 Query: 337 LAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN 633 LA +KP+A+C VCGDRASGKHYGV SCDGCRGFFKRS+RRNL+YVCKE+ C VDVARRNQCQACRFKKCL V MNRDAVQHERAPR Y +KRD+ Sbjct: 2 LATSTGMKKPEALCLVCGDRASGKHYGVQSCDGCRGFFKRSIRRNLDYVCKENGQCVVDVARRNQCQACRFKKCLQVNMNRDAVQHERAPRCYQYKRDS 100
BLAST of Nuclear receptor vs. TrEMBL
Match: A0A1S3JR22 (nuclear receptor subfamily 2 group E member 1 isoform X2 OS=Lingula unguis OX=7574 GN=LOC106175397 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.675e-43 Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 1 Query: 358 RKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN 633 RKP+ +C VCGD+ASGKHYGV SCDGCRGFFKRS+RRNLEYVCKE+ C VDVARRNQCQACRF+KCL VKMN+DAVQHERAPR Y +KRD+ Sbjct: 6 RKPEVLCLVCGDKASGKHYGVQSCDGCRGFFKRSIRRNLEYVCKENGNCVVDVARRNQCQACRFRKCLEVKMNKDAVQHERAPRCYQYKRDS 97
BLAST of Nuclear receptor vs. TrEMBL
Match: A0A1S3JS41 (nuclear receptor subfamily 2 group E member 1 isoform X1 OS=Lingula unguis OX=7574 GN=LOC106175397 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.850e-43 Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 1 Query: 358 RKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN 633 RKP+ +C VCGD+ASGKHYGV SCDGCRGFFKRS+RRNLEYVCKE+ C VDVARRNQCQACRF+KCL VKMN+DAVQHERAPR Y +KRD+ Sbjct: 12 RKPEVLCLVCGDKASGKHYGVQSCDGCRGFFKRSIRRNLEYVCKENGNCVVDVARRNQCQACRFRKCLEVKMNKDAVQHERAPRCYQYKRDS 103
BLAST of Nuclear receptor vs. TrEMBL
Match: A0A1I8JGR6 (Nuclear receptor domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.324e-42 Identity = 72/96 (75.00%), Postives = 81/96 (84.38%), Query Frame = 1 Query: 367 DAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDIN 654 +A C VCGDRASGKHYGVLSCDGCRGFFKRSVRR+LEYVCKES CPVDVARRNQCQACR++KCL V MNRDAVQHERAPR + + + +S + Sbjct: 25 EAQCLVCGDRASGKHYGVLSCDGCRGFFKRSVRRSLEYVCKESGDCPVDVARRNQCQACRYRKCLMVSMNRDAVQHERAPRCLQYSKQDSPDSSLQ 120
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: nr2e1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:103026242]) HSP 1 Score: 139.428 bits (350), Expect = 7.975e-36 Identity = 75/140 (53.57%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 316 TSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES--NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLT 729 TSG D L SSR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN YVCK CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ Q G+K N S F S F T Sbjct: 8 TSGCLDIL-NVKSSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGTQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRK--QVALYFRGHKDVNGSSAPFPTASIPGPPFFTT 144
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: nr2e3 (nuclear receptor subfamily 2 group E member 3 [Source:NCBI gene;Acc:103047484]) HSP 1 Score: 122.094 bits (305), Expect = 1.277e-29 Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTH 669 +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + +CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS R + D++ K H Sbjct: 45 LCKVCADTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDSL--DVDTEKEH 142
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: nr2f2 (nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:103029842]) HSP 1 Score: 119.398 bits (298), Expect = 6.841e-29 Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ + CP+D RNQCQ CR KKCL V M R+AVQ R P + H + + + NG H SYL+ ++ L + P+PTS Sbjct: 86 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPH---HGQFALTNGDPLH--------CHSYLSGYISLLLRAE-PYPTS 201
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: nr2f2 (nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:103029842]) HSP 1 Score: 119.783 bits (299), Expect = 7.040e-29 Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ + CP+D RNQCQ CR KKCL V M R+AVQ R P + H + + + NG H SYL+ ++ L + P+PTS Sbjct: 86 CVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPH---HGQFALTNGDPLH--------CHSYLSGYISLLLRAE-PYPTS 201
BLAST of Nuclear receptor vs. Ensembl Cavefish
Match: rxrba (retinoid x receptor, beta a [Source:NCBI gene;Acc:30530]) HSP 1 Score: 118.242 bits (295), Expect = 2.714e-28 Identity = 53/107 (49.53%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 343 QPISSRKPDA------VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKES 645 +P+S P +C +CGDR+SGKHYGV SC+GC+GFFKR+VR++L Y C+++ C VD +RN+CQ CR++KCL++ M R+AVQ E R N +RD + ES Sbjct: 75 KPLSGHSPGPTLSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECMVDKRQRNRCQYCRYQKCLAMGMKREAVQEE---RQRNKERDGEVES 178
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: nr2e3 (nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]) HSP 1 Score: 119.013 bits (297), Expect = 3.202e-29 Identity = 56/97 (57.73%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKES-NVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGY 660 C VCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+ S +C VD A RNQCQACR +KCL MN+DAVQ+ER PRS R E N + Sbjct: 50 TCLVCGDVSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQASTGLCTVDKAHRNQCQACRLRKCLHAGMNKDAVQNERQPRSTAQVRPGDPELGANTW 146
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: nr1d2a (nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1]) HSP 1 Score: 103.605 bits (257), Expect = 1.472e-23 Identity = 45/80 (56.25%), Postives = 64/80 (80.00%), Query Frame = 1 Query: 373 VCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEY-VCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPR 609 +C+VCGD ASG HYGV +C+GC+GFF+RS+++N++Y C ++ CP+ A RN+CQ CRFKKCLSV M++DAV+ R P+ Sbjct: 121 LCKVCGDAASGFHYGVHACEGCKGFFRRSIQQNIKYKPCLKNETCPIVRANRNRCQHCRFKKCLSVGMSKDAVRFGRIPK 200
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006803.1 (pep scaffold:Pmarinus_7.0:GL479639:153667:156574:-1 gene:ENSPMAG00000006138.1 transcript:ENSPMAT00000006803.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 96.2857 bits (238), Expect = 2.731e-23 Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 364 PDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRD 582 P C VCGDRASG+HYG +SC+GC+GFFKRSVR+NL+Y C+ S C ++ RN+CQ CR +KC +V M + Sbjct: 123 PVEFCVVCGDRASGRHYGAVSCEGCKGFFKRSVRKNLKYTCRGSQDCVINKHHRNRCQYCRLQKCFNVGMKTE 195
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: hnf4g (hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]) HSP 1 Score: 98.9821 bits (245), Expect = 1.796e-22 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 370 AVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSY-NHKRDNQKESDINGYKTHNPLSLSF 690 + C +CGDRA+GKHYG SCDGC+GFF+RS+R+N Y C+ S C VD +RNQC+ R KKC M ++AVQ+ER S + +D+ IN + LS F Sbjct: 61 SFCAICGDRATGKHYGASSCDGCKGFFRRSIRKNHMYSCRYSRQCVVDKDKRNQCRY-RLKKCFRAGMKKEAVQNERDRISTRRNSQDDATSPSINTFVQAESLSRQF 167
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Match: thrb (thyroid hormone receptor beta [Source:NCBI gene;Acc:30607]) HSP 1 Score: 96.2857 bits (238), Expect = 1.081e-21 Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLE--YVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHER 600 C VCGD+A+G HY ++C+GC+GFF+R+++++L YVCK S C VD RNQCQ CRFKKCL+V M D V +R Sbjct: 12 CAVCGDKATGYHYHCITCEGCKGFFRRTIQKSLHVMYVCKFSETCTVDRINRNQCQECRFKKCLAVGMVTDLVLDDR 88
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO42936 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S012]) HSP 1 Score: 154.836 bits (390), Expect = 3.363e-42 Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQ 636 CRVCGDRASGKHYGV++CDGCRGFFKRSVRRNL Y CKE N CP+DVARRNQCQACR +KC + MNRDAVQHERAPR+ ++++Q Sbjct: 4 CRVCGDRASGKHYGVMTCDGCRGFFKRSVRRNLAYQCKEKNDCPIDVARRNQCQACRLRKCFEMNMNRDAVQHERAPRTSQIRQNSQ 90
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO32715 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUB6]) HSP 1 Score: 143.28 bits (360), Expect = 2.230e-38 Identity = 63/78 (80.77%), Postives = 68/78 (87.18%), Query Frame = 1 Query: 379 RVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRS 612 RVCGDR+SGKHYGV +CDGCRGFFKRS+RRNL Y CKE C VDVARRNQCQACR KKC V+MN+DAVQHERAPRS Sbjct: 2 RVCGDRSSGKHYGVFTCDGCRGFFKRSIRRNLTYHCKELGKCVVDVARRNQCQACRLKKCFEVQMNKDAVQHERAPRS 79
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO38323 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SD90]) HSP 1 Score: 127.872 bits (320), Expect = 1.395e-32 Identity = 56/94 (59.57%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 355 SRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNV---CPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKR 627 R D C+VCGDR+SGKHYG+ +CDGC GFFKRS+RRN Y C+ +N CPVD RNQC++CR KKC V MN+DAVQHER PRS ++ Sbjct: 1 GRLLDIPCKVCGDRSSGKHYGIYACDGCSGFFKRSIRRNRSYTCRATNGKGNCPVDKIHRNQCRSCRLKKCFDVSMNKDAVQHERGPRSSTLRK 94
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO38322 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SD88]) HSP 1 Score: 127.102 bits (318), Expect = 1.758e-32 Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 358 RKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSL 684 +K + +C+VCGD +SG+HYGV +CDGC GFF RSVRR++ Y CK + C VD RRNQCQACRFKKCL VKMNR AVQ ER P S + + E + G SL Sbjct: 3 KKQEILCKVCGDISSGRHYGVYTCDGCSGFFMRSVRRDMVYTCKGNGGCTVDKKRRNQCQACRFKKCLEVKMNRFAVQQERQPNSTRVMKPHLDEYGLKGLNNEFLASL 111
BLAST of Nuclear receptor vs. Ensembl Nematostella
Match: EDO37645 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SF49]) HSP 1 Score: 124.405 bits (311), Expect = 3.353e-31 Identity = 68/150 (45.33%), Postives = 86/150 (57.33%), Query Frame = 1 Query: 313 LTSGAFDELAQPISSRKPDAV-CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759 +T+ D P S K V C VCGD++SGKHYGV +C+GC+ FFKRSVRRNL Y C+ S CP+D RNQCQ CR KKCL V M R+AVQ R P + + N ING + N SYL+ + L + P+PT+ Sbjct: 6 VTTWTRDSTETPEDSEKNVQVECAVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLTYTCRASRDCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRIPAAQTPTQ-NAALPGINGDGSTNG-------HSYLSGFIALLLRAE-PYPTT 146
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: nr2e1 (nuclear receptor subfamily 2 group E member 1 [Source:NCBI gene;Acc:100049530]) HSP 1 Score: 141.354 bits (355), Expect = 1.607e-36 Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 316 TSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESN--VCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDN----QKESDINGYKTHNPLS 681 TSG D L SSR D C+VCGDR+SGKHYGV +CDGC GFFKRS+RRN Y+CK + CPVD RNQC+ACR KKCL V MN+DAVQHER PR+ ++ + ++NG TH P S Sbjct: 8 TSGCLDIL-NVKSSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYLCKSGSQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEVNGSSTHFPGS 134
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: nr2e3 (photoreceptor-specific nuclear receptor [Source:NCBI gene;Acc:101164305]) HSP 1 Score: 130.183 bits (326), Expect = 7.397e-33 Identity = 62/108 (57.41%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 307 VLLTSGAFDELAQ--PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNH 621 + +T D LA+ P R PD +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS H Sbjct: 3 IWITVMTADVLAEKSPRKGRGPDVLCKVCSDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGRCPVDKAHRNQCQACRLKKCLQSGMNKDAVQNERQPRSTAH 110
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: nr2e3 (photoreceptor-specific nuclear receptor [Source:NCBI gene;Acc:101164305]) HSP 1 Score: 128.257 bits (321), Expect = 8.586e-32 Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNH 621 P R PD +C+VC D +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS H Sbjct: 31 PRKGRGPDVLCKVCSDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGRCPVDKAHRNQCQACRLKKCLQSGMNKDAVQNERQPRSTAH 123
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: NR2E3 (photoreceptor-specific nuclear receptor-like [Source:NCBI gene;Acc:101156874]) HSP 1 Score: 127.872 bits (320), Expect = 1.563e-31 Identity = 59/102 (57.84%), Postives = 72/102 (70.59%), Query Frame = 1 Query: 346 PISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESD 648 P + P VC+VCGD +SGKHYG+ +C+GC GFFKRSVRR L Y C+ + +CPVD A RNQCQACR KKCL MN+DAVQ+ER PRS R + + D Sbjct: 36 PGKALSPALVCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDSIDVD 137
BLAST of Nuclear receptor vs. Ensembl Medaka
Match: nr2f2 (COUP transcription factor 2 [Source:NCBI gene;Acc:101172490]) HSP 1 Score: 122.865 bits (307), Expect = 4.906e-30 Identity = 63/139 (45.32%), Postives = 84/139 (60.43%), Query Frame = 1 Query: 346 PISSRKPDAV-CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTS 759 P S ++P + C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ + CP+D RNQCQ CR KKCL V M R+AVQ R P + H + + + NG H SYL+ ++ L + P+PTS Sbjct: 53 PQSEKQPQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRVPPTQPH---HGQFALTNGDPLH--------CHSYLSGYISLLLRAE-PYPTS 179
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000076268.1 (SMESG000076268.1) HSP 1 Score: 785.408 bits (2027), Expect = 0.000e+0 Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 1 Query: 277 MASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIPLASDKIHPKSMGTSSFNLNCQMNCNRMLSSFDYRKSSELQKLRDEMIRARIAVNRAFFCHPSSTILEKSQIIEEKSKFAELMTNQIMNLMHSQLASTLHQMSWGKEAYHIFGNRSMIRPWHDKICASEQGIIDKCIIEGKKIALIEMTIKDYLIINQKNQNIITDPIARSSIHRLWPVLLTLKIYQQGMSLPDMSTEPSNAD 1395 MASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIPLASDKIHPKSMGTSSFNLNCQMNCNRMLSSFDYRKSSELQKLRDEMIRARIAVNRAFFCHPSSTILEKSQIIEEKSKFAELMTNQIMNLMHSQLASTLHQMSWGKEAYHIFGNRSMIRPWHDKICASEQGIIDKCIIEGKKIALIEMTIKDYLIINQKNQNIITDPIARSSIHRLWPVLLTLKIYQQGMSLPDMSTEPSNAD Sbjct: 1 MASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRDNQKESDINGYKTHNPLSLSFDVFSYLNNHVFLTQKKSFPFPTSIDAEAIQTIPLASDKIHPKSMGTSSFNLNCQMNCNRMLSSFDYRKSSELQKLRDEMIRARIAVNRAFFCHPSSTILEKSQIIEEKSKFAELMTNQIMNLMHSQLASTLHQMSWGKEAYHIFGNRSMIRPWHDKICASEQGIIDKCIIEGKKIALIEMTIKDYLIINQKNQNIITDPIARSSIHRLWPVLLTLKIYQQGMSLPDMSTEPSNAD 373 HSP 2 Score: 218.779 bits (556), Expect = 0.000e+0 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 2 Query: 1394 MEQLMETFNKIKFIRPLNEEIQSLFNLIIMHDLSQMSPEPLKFAYQEKLSKCVNQAMKNPAYQKILNLAMYLIQTIFTVKKSFLQNIFLPYSMDLDKILDKFFNRNA 1714 MEQLMETFNKIKFIRPLNEEIQSLFNLIIMHDLSQMSPEPLKFAYQEKLSKCVNQAMKNPAYQKILNLAMYLIQTIFTVKKSFLQNIFLPYSMDLDKILDKFFNRNA Sbjct: 374 MEQLMETFNKIKFIRPLNEEIQSLFNLIIMHDLSQMSPEPLKFAYQEKLSKCVNQAMKNPAYQKILNLAMYLIQTIFTVKKSFLQNIFLPYSMDLDKILDKFFNRNA 480
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000078919.1 (SMESG000078919.1) HSP 1 Score: 120.553 bits (301), Expect = 1.369e-28 Identity = 57/99 (57.58%), Postives = 71/99 (71.72%), Query Frame = 1 Query: 340 AQPISSRKPDAVC-RVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRD 630 QPI S +C VCGD +SGKHYG+L+C+GC GFFKRSVRR L Y C+ + C +D A RNQCQACR KKCL + MN+DAVQ+ER PR+ + R+ Sbjct: 105 GQPIKSSMLHGLCCVVCGDVSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCTIDKAHRNQCQACRLKKCLLMGMNKDAVQNERQPRNSSQIRN 203
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000078919.1 (SMESG000078919.1) HSP 1 Score: 120.168 bits (300), Expect = 1.464e-28 Identity = 57/99 (57.58%), Postives = 71/99 (71.72%), Query Frame = 1 Query: 340 AQPISSRKPDAVC-RVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKE-SNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNHKRD 630 QPI S +C VCGD +SGKHYG+L+C+GC GFFKRSVRR L Y C+ + C +D A RNQCQACR KKCL + MN+DAVQ+ER PR+ + R+ Sbjct: 104 GQPIKSSMLHGLCCVVCGDVSSGKHYGILACNGCSGFFKRSVRRKLIYRCQAGTGRCTIDKAHRNQCQACRLKKCLLMGMNKDAVQNERQPRNSSQIRN 202
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000056421.1 (SMESG000056421.1) HSP 1 Score: 117.087 bits (292), Expect = 1.172e-27 Identity = 47/82 (57.32%), Postives = 63/82 (76.83%), Query Frame = 1 Query: 376 CRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERAPRSYNH 621 C VCGD++SGKHYG +C+GC+ FFKRSVRRNL Y C+ ++ CP+D+ RNQCQ CRF+KCL + M ++AVQ R P+ +H Sbjct: 112 CVVCGDKSSGKHYGQYTCEGCKSFFKRSVRRNLTYSCRGNHNCPIDIHHRNQCQNCRFQKCLKMGMRKEAVQQGRIPQFSSH 193
BLAST of Nuclear receptor vs. Planmine SMEST
Match: SMESG000019911.1 (SMESG000019911.1) HSP 1 Score: 114.005 bits (284), Expect = 1.550e-26 Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 1 Query: 280 ASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSCDGCRGFFKRSVRRNLEYVCKESNVCPVDVARRNQCQACRFKKCLSVKMNRDAVQHERA 603 ++NE+L+ D +S + LA SS +C +C D A+GKHYGVL+C+GC+GFFKR++R+ L Y C+E N+CP+ RN+CQ+CRF KCL M +AVQ ER+ Sbjct: 146 SANENLSIDSSQSSYTNNSLAAAPSSHY--DLCAICTDLATGKHYGVLACEGCKGFFKRTIRKELHYTCREKNMCPITERLRNRCQSCRFNKCLDQGMKIEAVQRERS 251 The following BLAST results are available for this feature:
BLAST of Nuclear receptor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Nuclear receptor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Nuclear receptor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Nuclear receptor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Nuclear receptor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Nuclear receptor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Nuclear receptor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Nuclear receptor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Nuclear receptor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Nuclear receptor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Nuclear receptor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Nuclear receptor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Nuclear receptor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Nuclear receptor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30028766 ID=SMED30028766|Name=Nuclear receptor|organism=Schmidtea mediterranea sexual|type=transcript|length=1718bpback to top protein sequence of SMED30028766-orf-1 >SMED30028766-orf-1 ID=SMED30028766-orf-1|Name=SMED30028766-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=404bp MASNESLNCDVLLTSGAFDELAQPISSRKPDAVCRVCGDRASGKHYGVLSback to top protein sequence of SMED30028766-orf-2 >SMED30028766-orf-2 ID=SMED30028766-orf-2|Name=SMED30028766-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=110bp MPMEQLMETFNKIKFIRPLNEEIQSLFNLIIMHDLSQMSPEPLKFAYQEKback to top Annotated Terms
The following terms have been associated with this transcript:
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