PMS1 protein-like protein 1 DNA mismatch repair protein
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30028625 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Human
Match: PMS1 (PMS1 homolog 1, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9121]) HSP 1 Score: 179.104 bits (453), Expect = 2.457e-46 Identity = 114/353 (32.29%), Postives = 185/353 (52.41%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGAS------KFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY-MKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLP 1114
MK+L +TV+L+SSS +I+SV V+KEL+ENS+DA A+ + + L+ +G DKIEV D+G G D P++ ++ TSKI+ D+E + T+GFRGE L SIC I+ + I ++ ADN +V D G I++Q QGT +T +F NLPVR Q Y++ + +K I L + + ++ I +++ V+ S K A+ V+G + F+Y E ++ L+ F+P D T E ++F+N RP + K +R Y +K ++ YP L + +P + VDVN+ P+K ++ L N + ++ + Y LP
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADN--FSTQYVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSE---------ESQIYLSGFLP-KCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLP 341
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Human
Match: PMS1 (PMS1 homolog 1, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9121]) HSP 1 Score: 179.104 bits (453), Expect = 4.801e-46 Identity = 114/354 (32.20%), Postives = 186/354 (52.54%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGAS------KFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY-MKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPN 1117
MK+L +TV+L+SSS +I+SV V+KEL+ENS+DA A+ + + L+ +G DKIEV D+G G D P++ ++ TSKI+ D+E + T+GFRGE L SIC I+ + I ++ ADN +V D G I++Q QGT +T +F NLPVR Q Y++ + +K I L + + ++ I +++ V+ S K A+ V+G + F+Y E ++ L+ F+P D T E ++F+N RP + K +R Y +K ++ YP L + +P + VDVN+ P+K ++ L N + ++ + Y LP+
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADN--FSTQYVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSE---------ESQIYLSGFLP-KCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPS 342
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Human
Match: PMS1 (PMS1 homolog 1, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9121]) HSP 1 Score: 164.466 bits (415), Expect = 6.274e-42 Identity = 107/347 (30.84%), Postives = 172/347 (49.57%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY-MKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLP 1114
MK+L +TV+L+SSS +I+SV V+KEL+ENS+DA A+ + + L+ +G DKIEV D+G G D P++ ++ TSKI+ D+E + T+GFRGE L SIC I+ + I ++ ADN +V D G I++Q QGT +T +F NLPVR Q Y++ + +K I L + + ++ I FV ++++ L+ F+P D T E ++F+N RP + K +R Y +K ++ YP L + +P + VDVN+ P+K ++ L N + ++ + Y LP
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADN--FSTQYVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILKPDLR----------------------IVFV--------------------HNKIYLSGFLP-KCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLP 302
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Human
Match: PMS1 (PMS1 homolog 1, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9121]) HSP 1 Score: 164.466 bits (415), Expect = 6.274e-42 Identity = 107/347 (30.84%), Postives = 172/347 (49.57%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY-MKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLP 1114
MK+L +TV+L+SSS +I+SV V+KEL+ENS+DA A+ + + L+ +G DKIEV D+G G D P++ ++ TSKI+ D+E + T+GFRGE L SIC I+ + I ++ ADN +V D G I++Q QGT +T +F NLPVR Q Y++ + +K I L + + ++ I FV ++++ L+ F+P D T E ++F+N RP + K +R Y +K ++ YP L + +P + VDVN+ P+K ++ L N + ++ + Y LP
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADN--FSTQYVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILKPDLR----------------------IVFV--------------------HNKIYLSGFLP-KCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLP 302
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Human
Match: PMS1 (PMS1 homolog 1, mismatch repair system component [Source:HGNC Symbol;Acc:HGNC:9121]) HSP 1 Score: 164.466 bits (415), Expect = 7.801e-42 Identity = 107/347 (30.84%), Postives = 172/347 (49.57%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY-MKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLP 1114
MK+L +TV+L+SSS +I+SV V+KEL+ENS+DA A+ + + L+ +G DKIEV D+G G D P++ ++ TSKI+ D+E + T+GFRGE L SIC I+ + I ++ ADN +V D G I++Q QGT +T +F NLPVR Q Y++ + +K I L + + ++ I FV ++++ L+ F+P D T E ++F+N RP + K +R Y +K ++ YP L + +P + VDVN+ P+K ++ L N + ++ + Y LP
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADN--FSTQYVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILKPDLR----------------------IVFV--------------------HNKIYLSGFLP-KCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLP 302
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Celegans
Match: pms-2 (PMS (Post Meiotic Segregation) family [Source:UniProtKB/TrEMBL;Acc:G5EFG5]) HSP 1 Score: 129.798 bits (325), Expect = 8.934e-31 Identity = 93/369 (25.20%), Postives = 185/369 (50.14%), Query Frame = 2
Query: 80 KMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQ-----MYNSLFVLQKTLKSITTNLHHL-YLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASK----FKYFHELLKSETTEDNHELSLNLFVP----------------SSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFY 1102
K+++++ + ++++ V+ S+ I++L++NSIDA ++ I I +K G + IEV D+G G + + +C+ H TSK+++F+D + + T GFRGE L+++C +S++SI ++ A ++ +G +D G I+ + + + GT I V+ +F LPVR + L T++S H+ L NI+ K N T+S ++ + + G ++ K L+ + + + E+ VP SS + G D + ++++N+RP E S + + Y +F N +YP +VL++ +P +DVN+ P+K+ + L + ++ ++ + Y
Sbjct: 5 KIERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSGIEARNFDALCKPHSTSKLTQFSDFDKLATLGFRGEALNALCTVSSVSIFTR--ASDTEIGTRLTYDHSGNIICRQSAARELGTTIIVNKLFETLPVRRKELERSQKREFVKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGG---TTSIQDVVANLFGIARKIENSKIGSGLIPIQQNQPDVEIMTIHSVPMEEMHFFDLFKIRGFVSSCEHGCGRGTSDRQ---FVYINNRPVEYSRVCSVINDVYKQF---NKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTY 362
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Celegans
Match: mlh-1 (MLH (MutL Homolog) family [Source:UniProtKB/TrEMBL;Acc:Q9XU10]) HSP 1 Score: 105.145 bits (261), Expect = 5.221e-23 Identity = 56/157 (35.67%), Postives = 94/157 (59.87%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVR 547
+++L V +++ V++ IKELVENS+DA A+ I +N++ GL ++V D+G G + D L+C+R TSK+ +F D+ + T+GFRGE L+S+ ++ ++I+SK N++ KM +A K GT IT +++F+NLP R
Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKGIEREDFALVCERFATSKLQKFEDLMHMKTYGFRGEALASLSHVAKVNIVSKRADAKCAYQANFLDGKMTADTKPAA--GKNGTCITATDLFYNLPTR 158
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Fly
Match: Mlh1 (gene:FBgn0011659 transcript:FBtr0088790) HSP 1 Score: 132.109 bits (331), Expect = 1.381e-31 Identity = 105/379 (27.70%), Postives = 179/379 (47.23%), Query Frame = 2
Query: 62 NYFKIFKMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKM-GQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDY---KENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNL----------RQFYESLPNNINEELPVAND 1150
Y + ++KL++ V I++ +I +KEL+ENS+DA ++ I + +K GL +++ D+G G +D+ ++C+R TSK++ F D+ I TFGFRGE L+SI +++LSI +K + + K+ GQ QGT I + ++F+N+P R Q S + L + + ++ R ++ D L P+ SSR E I + GA+ K ELL+ ++ ++ + T +Y K LF+N R E + L +V + Y + + +P + + LTLP +DVN+ P K ++ +I D I+ + R FY+ L LP A D
Sbjct: 3 EYLQPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQ---PKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLAR-YAVHNPRVGFTLRKQGDAQPALRTPVASSRSENIRIIYGAAISK---ELLEFSHRDEVYKFEAECLI----------TQVNYSAKKCQMLLFINQRLVESTALRTSVDSIYATYLPR--GHHPFVYMSLTLPPQNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQL------RLPGAPD 356
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Fly
Match: Pms2 (gene:FBgn0011660 transcript:FBtr0087388) HSP 1 Score: 129.413 bits (324), Expect = 1.751e-30 Identity = 103/362 (28.45%), Postives = 178/362 (49.17%), Query Frame = 2
Query: 80 KMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDDVPL--ICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVR---------------CQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTED---NHELSLNLFVPSSVDDKLGLTHCDY-----------------KENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSN 1054
++K + TV I S V+ S+ +KELVENSIDA A+ + I LK GL +EV D+G G +++ L + ++ TSKI EF D+ + TFGFRGE LSS+CA+S++ I +++ + + +G D G+I +S GT + ++N+F LPVR CQ+ + ++ K ++ + +N H + I ++ D V+ N+ ++A V S F +L ++E D +L+ S +D L D+ ++ + FVN RP + + K + Y ++ N+ + P + L + +S VDVN+ P+KR++ ++N
Sbjct: 26 QIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNGSGVEEMNLEGMTAKYHTSKIREFVDLLGVETFGFRGEALSSLCALSDMVIQTRHKSTD--VGVKVELDHEGRIKKRSPCARGVGTTVLLANLFSTLPVRRRDFTRNIKKEFTKMCQILQAYCLVTKGVRILCSN--HTPKGAKTIVLQTHGDQEVMANISAIFGARQAADLVPLKSPFGQ-GQLTEAELRADLESGADLADTTSPQISTEDVERLNQADFQLEGFISSCRHGAGRSSRDRQFFFVNSRPCDPKNIAKVMNEVYHRY---NVQQQPFIYLNIITARSDVDVNLTPDKRQLLINN 379
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Fly
Match: Mlh1 (gene:FBgn0011659 transcript:FBtr0331379) HSP 1 Score: 128.642 bits (322), Expect = 1.938e-30 Identity = 105/379 (27.70%), Postives = 179/379 (47.23%), Query Frame = 2
Query: 62 NYFKIFKMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKM-GQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDY---KENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNL----------RQFYESLPNNINEELPVAND 1150
Y + ++KL++ V I++ +I +KEL+ENS+DA ++ I + +K GL +++ D+G G +D+ ++C+R TSK++ F D+ I TFGFRGE L+SI +++LSI +K + + K+ GQ QGT I + ++F+N+P R Q S + L + + ++ R ++ D L P+ SSR E I + GA+ K ELL+ ++ ++ + T +Y K LF+N R E + L +V + Y + + +P + + LTLP +DVN+ P K ++ +I D I+ + R FY+ L LP A D
Sbjct: 3 EYLQPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNGTGIRREDLAIVCERFTTSKLTRFEDLSQIATFGFRGEALASISHVAHLSIQTKTAKEKCGYKATYADGKLQGQ---PKPCAGNQGTIICIEDLFYNMPQRRQALRSPAEEFQRLSEVLAR-YAVHNPRVGFTLRKQGDAQPALRTPVASSRSENIRIIYGAAISK---ELLEFSHRDEVYKFEAECLI----------TQVNYSAKKCQMLLFINQRLVESTGL-TSVDSIYATYLPR--GHHPFVYMSLTLPPQNLDVNVHPTKHEVHFLYQEEIVDSIKQQVEARLLGSNATRTFYKQL------RLPGAPD 355
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Zebrafish
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]) HSP 1 Score: 182.185 bits (461), Expect = 3.109e-47 Identity = 122/368 (33.15%), Postives = 199/368 (54.08%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLN---RYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEELPVANDGYNINKL 1171
MK L TV+L+ SS VI+SV V+KEL+ENS+DA +S + + L+ +GLD+IEV D+G G DV ++ +H TSKIS D+E + T+GFRGE L+SICAIS + I +K D+ + + D GQI++Q QGT + +N+F NLPVR Q Y++ + LK + L + + + + L ++ VV S + A+ V+GA+ +L + ++ E+ ++ F P D L T + ++FVN RP + K ++ Y + + + RYP+ ++ +T+P S VDVN+ P+K ++ L N ++ ++T L Y +N E L A + ++ L
Sbjct: 1 MKALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSI--QYSVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAVIKPELRVTLSHNKAVVWQKSRVSDHRTALMAVLGAASVA---NMLPVQHHQEQPEIHIDGFFPKPGSD-LNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGY--SNGEENLKTAGNPSDVTSL 360
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Zebrafish
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]) HSP 1 Score: 182.185 bits (461), Expect = 3.109e-47 Identity = 122/368 (33.15%), Postives = 199/368 (54.08%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLN---RYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEELPVANDGYNINKL 1171
MK L TV+L+ SS VI+SV V+KEL+ENS+DA +S + + L+ +GLD+IEV D+G G DV ++ +H TSKIS D+E + T+GFRGE L+SICAIS + I +K D+ + + D GQI++Q QGT + +N+F NLPVR Q Y++ + LK + L + + + + L ++ VV S + A+ V+GA+ +L + ++ E+ ++ F P D L T + ++FVN RP + K ++ Y + + + RYP+ ++ +T+P S VDVN+ P+K ++ L N ++ ++T L Y +N E L A + ++ L
Sbjct: 1 MKALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSI--QYSVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAVIKPELRVTLSHNKAVVWQKSRVSDHRTALMAVLGAASVA---NMLPVQHHQEQPEIHIDGFFPKPGSD-LNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGY--SNGEENLKTAGNPSDVTSL 360
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Zebrafish
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]) HSP 1 Score: 181.8 bits (460), Expect = 3.560e-47 Identity = 122/368 (33.15%), Postives = 199/368 (54.08%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLN---RYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEELPVANDGYNINKL 1171
MK L TV+L+ SS VI+SV V+KEL+ENS+DA +S + + L+ +GLD+IEV D+G G DV ++ +H TSKIS D+E + T+GFRGE L+SICAIS + I +K D+ + + D GQI++Q QGT + +N+F NLPVR Q Y++ + LK + L + + + + L ++ VV S + A+ V+GA+ +L + ++ E+ ++ F P D L T + ++FVN RP + K ++ Y + + + RYP+ ++ +T+P S VDVN+ P+K ++ L N ++ ++T L Y +N E L A + ++ L
Sbjct: 1 MKALPPETVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKATDVSVMAVKHYTSKISCHEDLEQLETYGFRGEALASICAISEVIITTKTADDDFSI--QYSVDHNGQIVSQKPSHLGQGTTVCAANLFKNLPVRRQYYSNTKKCKDELKRVQNLLMAYAVIKPELRVTLSHNKAVVWQKSRVSDHRTALMAVLGAASVA---NMLPVQHHQEQPEIHIDGFFPKPGSD-LNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGY--SNGEENLKTAGNPSDVTSL 360
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Zebrafish
Match: pms2 (PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]) HSP 1 Score: 130.954 bits (328), Expect = 3.657e-31 Identity = 103/372 (27.69%), Postives = 191/372 (51.34%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDD--VPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNS---------LFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKY---FHELLKSETTEDNHELS----------LNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNIN 1126
+K ++ +V I S V+ S+ +KELVENSIDA A+ + + LK G++ +EV D+G G ++ + +H TSK+ EF+D+ + TFGFRGE LSS+CA+S+LS+++ +++ +G V+D G++ + GT +T+ +F LPVR + + +FVLQ + I+T + + S + K ++S ++ I V G + + F ++ +++ ++++ L ++ FV S D +G + D + + F+N RP + + K V Y + N ++YP + L + + VDVN+ P+KR+I L + ++++L +E+ N I+
Sbjct: 30 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKGVEEQNYEGLTLKHHTSKLKEFSDLIHVETFGFRGEALSSLCALSDLSVVT--CHESAQIGARLVYDHDGRLTQCVPHPRQHGTTVTLQKLFSTLPVRHKEFQRNIKKEYSKMIFVLQ-SYCIISTGV-RITCSNQMGQGKRSTVLCTSG----SNSMRDNIGAVFGPKQLQSLIPFRQISPNDSVKEDYGLGGVDVPKDLFNIDGFV-SQGDHGVGRSATDRQ---FFFINKRPCDPVKVSKLVNEVYHMY---NRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMFETGVNKIS 386
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Zebrafish
Match: pms2 (PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]) HSP 1 Score: 130.954 bits (328), Expect = 7.100e-31 Identity = 103/372 (27.69%), Postives = 191/372 (51.34%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDD--VPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNS---------LFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKY---FHELLKSETTEDNHELS----------LNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNIN 1126
+K ++ +V I S V+ S+ +KELVENSIDA A+ + + LK G++ +EV D+G G ++ + +H TSK+ EF+D+ + TFGFRGE LSS+CA+S+LS+++ +++ +G V+D G++ + GT +T+ +F LPVR + + +FVLQ + I+T + + S + K ++S ++ I V G + + F ++ +++ ++++ L ++ FV S D +G + D + + F+N RP + + K V Y + N ++YP + L + + VDVN+ P+KR+I L + ++++L +E+ N I+
Sbjct: 12 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKGVEEQNYEGLTLKHHTSKLKEFSDLIHVETFGFRGEALSSLCALSDLSVVT--CHESAQIGARLVYDHDGRLTQCVPHPRQHGTTVTLQKLFSTLPVRHKEFQRNIKKEYSKMIFVLQ-SYCIISTGV-RITCSNQMGQGKRSTVLCTSG----SNSMRDNIGAVFGPKQLQSLIPFRQISPNDSVKEDYGLGGVDVPKDLFNIDGFV-SQGDHGVGRSATDRQ---FFFINKRPCDPVKVSKLVNEVYHMY---NRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMFETGVNKIS 368
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Xenopus
Match: col2a1 (collagen, type II, alpha 1 [Source:Xenbase;Acc:XB-GENE-6258353]) HSP 1 Score: 184.882 bits (468), Expect = 4.500e-48 Identity = 119/347 (34.29%), Postives = 193/347 (55.62%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNR-----YPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFY 1102
M L +T++L+SSS VI+SV V+KELVEN++DA A+ I I L+ FG DKIEV D+G G DD P++ +H TSKI+ D+ET+ T+GFRGE L+SIC+++ + I +K D+ K ++ D G +++Q QGT ++V +F NLPVR Q Y+++ ++ +++I L + N+ I N+ +V TS K A V+G++ + ++ + ++ ++ +N ++P D T E +LF+N RP + K VR + NQ+LN+ YP + + LP S +DVN+ P+K +I L N + ++ LR Y
Sbjct: 1 MHCLPSATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGIKSDDTPVMGVKHYTSKINSHDDLETLETYGFRGEALASICSVAEVHIATKTLEDD--FSKLYILDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTIKKCKEEIRNIQELLMAYGIVTPNLRILFTNNKALVWQKSKTSDHKMAFMSVVGSA---IMNCMVPIQYQSEDPKIFINGYLPKPYADNT-TTSLSSSEKSFLFINRRPIYHKEILKMVRW----YHNQSLNKGTPRCYPVFFMNIELPASCLDVNLTPDKTQIMLQNKEFVLHAVENVLRSVY 337
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Xenopus
Match: col2a1 (collagen, type II, alpha 1 [Source:Xenbase;Acc:XB-GENE-6258353]) HSP 1 Score: 184.882 bits (468), Expect = 5.093e-48 Identity = 119/347 (34.29%), Postives = 193/347 (55.62%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNR-----YPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFY 1102
M L +T++L+SSS VI+SV V+KELVEN++DA A+ I I L+ FG DKIEV D+G G DD P++ +H TSKI+ D+ET+ T+GFRGE L+SIC+++ + I +K D+ K ++ D G +++Q QGT ++V +F NLPVR Q Y+++ ++ +++I L + N+ I N+ +V TS K A V+G++ + ++ + ++ ++ +N ++P D T E +LF+N RP + K VR + NQ+LN+ YP + + LP S +DVN+ P+K +I L N + ++ LR Y
Sbjct: 1 MHCLPSATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGIKSDDTPVMGVKHYTSKINSHDDLETLETYGFRGEALASICSVAEVHIATKTLEDD--FSKLYILDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTIKKCKEEIRNIQELLMAYGIVTPNLRILFTNNKALVWQKSKTSDHKMAFMSVVGSA---IMNCMVPIQYQSEDPKIFINGYLPKPYADNT-TTSLSSSEKSFLFINRRPIYHKEILKMVRW----YHNQSLNKGTPRCYPVFFMNIELPASCLDVNLTPDKTQIMLQNKEFVLHAVENVLRSVY 337
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Xenopus
Match: col2a1 (collagen, type II, alpha 1 [Source:Xenbase;Acc:XB-GENE-6258353]) HSP 1 Score: 182.185 bits (461), Expect = 3.666e-47 Identity = 116/333 (34.83%), Postives = 188/333 (56.46%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNR-----YPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTL 1060
M L +T++L+SSS VI+SV V+KELVEN++DA A+ I I L+ FG DKIEV D+G G DD P++ +H TSKI+ D+ET+ T+GFRGE L+SIC+++ + I +K D+ K ++ D G +++Q QGT ++V +F NLPVR Q Y+++ ++ +++I L + N+ I N+ +V TS K A V+G++ + ++ + ++ ++ +N ++P D T E +LF+N RP + K VR + NQ+LN+ YP + + LP S +DVN+ P+K +I L N +
Sbjct: 1 MHCLPSATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGIKSDDTPVMGVKHYTSKINSHDDLETLETYGFRGEALASICSVAEVHIATKTLEDD--FSKLYILDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTIKKCKEEIRNIQELLMAYGIVTPNLRILFTNNKALVWQKSKTSDHKMAFMSVVGSA---IMNCMVPIQYQSEDPKIFINGYLPKPYADNT-TTSLSSSEKSFLFINRRPIYHKEILKMVRW----YHNQSLNKGTPRCYPVFFMNIELPASCLDVNLTPDKTQIMLQNKV 323
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Xenopus
Match: col2a1 (collagen, type II, alpha 1 [Source:Xenbase;Acc:XB-GENE-6258353]) HSP 1 Score: 181.8 bits (460), Expect = 5.420e-47 Identity = 116/333 (34.83%), Postives = 188/333 (56.46%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNR-----YPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTL 1060
M L +T++L+SSS VI+SV V+KELVEN++DA A+ I I L+ FG DKIEV D+G G DD P++ +H TSKI+ D+ET+ T+GFRGE L+SIC+++ + I +K D+ K ++ D G +++Q QGT ++V +F NLPVR Q Y+++ ++ +++I L + N+ I N+ +V TS K A V+G++ + ++ + ++ ++ +N ++P D T E +LF+N RP + K VR + NQ+LN+ YP + + LP S +DVN+ P+K +I L N +
Sbjct: 1 MHCLPSATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGIKSDDTPVMGVKHYTSKINSHDDLETLETYGFRGEALASICSVAEVHIATKTLEDD--FSKLYILDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTIKKCKEEIRNIQELLMAYGIVTPNLRILFTNNKALVWQKSKTSDHKMAFMSVVGSA---IMNCMVPIQYQSEDPKIFINGYLPKPYADNT-TTSLSSSEKSFLFINRRPIYHKEILKMVRW----YHNQSLNKGTPRCYPVFFMNIELPASCLDVNLTPDKTQIMLQNKV 323
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Xenopus
Match: col2a1 (collagen, type II, alpha 1 [Source:Xenbase;Acc:XB-GENE-6258353]) HSP 1 Score: 181.03 bits (458), Expect = 7.436e-47 Identity = 116/333 (34.83%), Postives = 188/333 (56.46%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNR-----YPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTL 1060
M L +T++L+SSS VI+SV V+KELVEN++DA A+ I I L+ FG DKIEV D+G G DD P++ +H TSKI+ D+ET+ T+GFRGE L+SIC+++ + I +K D+ K ++ D G +++Q QGT ++V +F NLPVR Q Y+++ ++ +++I L + N+ I N+ +V TS K A V+G++ + ++ + ++ ++ +N ++P D T E +LF+N RP + K VR + NQ+LN+ YP + + LP S +DVN+ P+K +I L N +
Sbjct: 1 MHCLPSATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGIKSDDTPVMGVKHYTSKINSHDDLETLETYGFRGEALASICSVAEVHIATKTLEDD--FSKLYILDSSGHVVSQKPSHLGQGTTVSVHKLFKNLPVRKQYYSTIKKCKEEIRNIQELLMAYGIVTPNLRILFTNNKALVWQKSKTSDHKMAFMSVVGSA---IMNCMVPIQYQSEDPKIFINGYLPKPYADNT-TTSLSSSEKSFLFINRRPIYHKEILKMVRW----YHNQSLNKGTPRCYPVFFMNIELPASCLDVNLTPDKTQIMLQNKV 323
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Mouse
Match: Pms1 (PMS1 homolog 1, mismatch repair system component [Source:MGI Symbol;Acc:MGI:1202302]) HSP 1 Score: 171.014 bits (432), Expect = 3.055e-44 Identity = 107/347 (30.84%), Postives = 183/347 (52.74%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY-MKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLP 1114
MK+L +TV+L+SSS I+SV V+KEL+ENS+DA A+ I + L+ +G DKIE+ D+G G DVP++ ++ TSKIS D+ + T+GFRGE L SIC ++ + + ++ +AD+ +V D G I++Q QGT +T +F NLPVR Q Y++ + LK++ L + + ++ I +++ V+ + A+ V+G + + E + ++ L+ F P D T E ++F+N RP + K +R Y +K ++ YP L + +P + VD+N+ P+K ++ L N + ++ + Y LP
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGEGIKAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADD--FSTQYVLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISYGVLKPDVRITFVHNKAVIWQKSRVPDHRMALMSVLGTAVMGNMESV---EQHCEQSQIYLSGFFPKH-DADHNSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCYGPLP 341
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Mouse
Match: Pms1 (PMS1 homolog 1, mismatch repair system component [Source:MGI Symbol;Acc:MGI:1202302]) HSP 1 Score: 171.014 bits (432), Expect = 1.352e-43 Identity = 107/347 (30.84%), Postives = 183/347 (52.74%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY-MKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLP 1114
MK+L +TV+L+SSS I+SV V+KEL+ENS+DA A+ I + L+ +G DKIE+ D+G G DVP++ ++ TSKIS D+ + T+GFRGE L SIC ++ + + ++ +AD+ +V D G I++Q QGT +T +F NLPVR Q Y++ + LK++ L + + ++ I +++ V+ + A+ V+G + + E + ++ L+ F P D T E ++F+N RP + K +R Y +K ++ YP L + +P + VD+N+ P+K ++ L N + ++ + Y LP
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGEGIKAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADD--FSTQYVLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISYGVLKPDVRITFVHNKAVIWQKSRVPDHRMALMSVLGTAVMGNMESV---EQHCEQSQIYLSGFFPKH-DADHNSTSLSTPERSFIFINSRPVHQKDILKLIRRYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIALENLMMTCYGPLP 341
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Mouse
Match: Pms2 (PMS1 homolog2, mismatch repair system component [Source:MGI Symbol;Acc:MGI:104288]) HSP 1 Score: 153.68 bits (387), Expect = 4.749e-38 Identity = 108/369 (29.27%), Postives = 188/369 (50.95%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDD--VPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPM-----TSSRKEAIPFVIGASKFKY---FHELLKSETTEDNHELSL-----NLFVPSSVDDKLGLTHCDYK------ENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNIN 1126
+K ++ +V I S V+ S+ +KEL+ENS+DA A+ I + LK +G+D IEV D+GCG ++ + +H TSKI EF D+ + TFGFRGE LSS+CA+S+++I ++ +G VFD G+I ++ +GT ++V ++F+ LPVR + + ++K + L + + + N P+ +S KE I V G + + F +L S+ + + LS NLF S ++ C + + + F+N RP + + + K V Y + N ++YP +VL +++ VD+N+ P+KR+I L + ++T+L ++S N +N
Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTI--STCHGSASVGTRLVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVRYKEFQR--NIKKEYAKMVQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVCEEYGLSTSRTPQNLFYVSGF-----ISQCTHGAGRSATDRQFFFINQRPCDPAKVSKLVNEVYHMY---NRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDANKLN 371
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Mouse
Match: Pms2 (PMS1 homolog2, mismatch repair system component [Source:MGI Symbol;Acc:MGI:104288]) HSP 1 Score: 123.25 bits (308), Expect = 2.319e-29 Identity = 63/157 (40.13%), Postives = 100/157 (63.69%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDD--VPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVR 547
+K ++ +V I S V+ S+ +KEL+ENS+DA A+ I + LK +G+D IEV D+GCG ++ + +H TSKI EF D+ + TFGFRGE LSS+CA+S+++I ++ +G VFD G+I ++ +GT ++V ++F+ LPVR
Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDVTI--STCHGSASVGTRLVFDHNGKITQKTPYPRPKGTTVSVQHLFYTLPVR 169
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Mouse
Match: Pms1 (PMS1 homolog 1, mismatch repair system component [Source:MGI Symbol;Acc:MGI:1202302]) HSP 1 Score: 111.694 bits (278), Expect = 1.884e-28 Identity = 56/129 (43.41%), Postives = 86/129 (66.67%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMG 463
MK+L +TV+L+SSS I+SV V+KEL+ENS+DA A+ I + L+ +G DKIE+ D+G G DVP++ ++ TSKIS D+ + T+GFRGE L SIC ++ + + ++ +AD+ +V D G
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGATSIEVKLENYGFDKIEIRDNGEGIKAVDVPVMAVKYYTSKISSHEDLGNLTTYGFRGEALGSICNVAEVVVTTRTSADD--FSTQYVLDGSG 127
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. UniProt/SwissProt
Match: sp|P54277|PMS1_HUMAN (PMS1 protein homolog 1 OS=Homo sapiens OX=9606 GN=PMS1 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.306e-45 Identity = 114/354 (32.20%), Postives = 186/354 (52.54%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGAS------KFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY-MKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPN 1117
MK+L +TV+L+SSS +I+SV V+KEL+ENS+DA A+ + + L+ +G DKIEV D+G G D P++ ++ TSKI+ D+E + T+GFRGE L SIC I+ + I ++ ADN +V D G I++Q QGT +T +F NLPVR Q Y++ + +K I L + + ++ I +++ V+ S K A+ V+G + F+Y E ++ L+ F+P D T E ++F+N RP + K +R Y +K ++ YP L + +P + VDVN+ P+K ++ L N + ++ + Y LP+
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEGIKAVDAPVMAMKYYTSKINSHEDLENLTTYGFRGEALGSICCIAEVLITTRTAADN--FSTQYVLDGSGHILSQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKDEIKKIQDLLMSFGILKPDLRIVFVHNKAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSE---------ESQIYLSGFLP-KCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPS 342
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. UniProt/SwissProt
Match: sp|P14242|PMS1_YEAST (DNA mismatch repair protein PMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PMS1 PE=1 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 1.543e-39 Identity = 114/363 (31.40%), Postives = 184/363 (50.69%), Query Frame = 2
Query: 80 KMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHH------LYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHEL------------LKSETTEDNHELSLN--LFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFY 1102
++ ++ND V I+S VI+ + +KELV+NSIDA A++I I K +GL+ IE D+G G D + + +H TSKI++F D+ + T GFRGE LSS+C I+ LS+++ + + +D +G I +++ + +GT + VS +FHNLPVR + ++ F Q T K +T + + S NI K + + SS ++ I V GA + E+ + + T+D L L+ + V + + K+ +++VN RP E S L K Y F N ++P++ L L LP S +DVN+ P+KR I L N + D +T L +Y
Sbjct: 3 QIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA---DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFT-KCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMR--NSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNV---QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDYY 356
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. UniProt/SwissProt
Match: sp|B0BA28|MUTL_CHLTB (DNA mismatch repair protein MutL OS=Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis) OX=471473 GN=mutL PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.408e-37 Identity = 121/401 (30.17%), Postives = 192/401 (47.88%), Query Frame = 2
Query: 80 KMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFI-----------QTNLRQFYESLPNNINEELPVANDGYNINKL-------PLSCELPT----TYLRT 1210
+++ L+ TV IS+ VI + V+KEL+ENS+DA A I I G +I V D+G G D +VP+ QRH TSKI+ F DI ++ ++GFRGE L SI +IS + I +TA LG + +K G+ + +QGT I V ++F+N+P+R S Q +I L + LS I +++ L++ E + V+G S + E + + + + L P+ H ++ LF+N+R E SF+ K V Y RYP VL L LP W D N+ P+K +++L QI++ + ++L + +P E++P+ N+G ++ + PLSC PT YL+T
Sbjct: 7 RIRLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRDNGVGMDPEEVPVALQRHATSKIAHFADIFSLASYGFRGEALPSIASISKMEI---HTARAGGLGSKTLIEK-GEPVCCEPAPRQQGTTIAVHSLFYNVPMRQSFQKS---PQMDRLAIRRLLENSVLSSEGIGWTWISERRQELHVAKKQGFIERVALVLGES---FVQEAFFIDKQQGDLRVLGFLGSPNQ--------HRSTRQGQRLFINNRAVESSFISKKVAEAYAWMIPA--QRYPIFVLKLFLPPMWCDFNVHPQKTEVRLLQEGQISNLLVEAISEALLRRSSSLEEIVLKVP---TEKIPIENEGISVPSIRPAIVSAPLSC--PTFSQQPYLKT 382
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. UniProt/SwissProt
Match: sp|B0B8E9|MUTL_CHLT2 (DNA mismatch repair protein MutL OS=Chlamydia trachomatis serovar L2 (strain 434/Bu / ATCC VR-902B) OX=471472 GN=mutL PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.408e-37 Identity = 121/401 (30.17%), Postives = 192/401 (47.88%), Query Frame = 2
Query: 80 KMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFI-----------QTNLRQFYESLPNNINEELPVANDGYNINKL-------PLSCELPT----TYLRT 1210
+++ L+ TV IS+ VI + V+KEL+ENS+DA A I I G +I V D+G G D +VP+ QRH TSKI+ F DI ++ ++GFRGE L SI +IS + I +TA LG + +K G+ + +QGT I V ++F+N+P+R S Q +I L + LS I +++ L++ E + V+G S + E + + + + L P+ H ++ LF+N+R E SF+ K V Y RYP VL L LP W D N+ P+K +++L QI++ + ++L + +P E++P+ N+G ++ + PLSC PT YL+T
Sbjct: 7 RIRLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRDNGVGMDPEEVPVALQRHATSKIAHFADIFSLASYGFRGEALPSIASISKMEI---HTARAGGLGSKTLIEK-GEPVCCEPAPRQQGTTIAVHSLFYNVPMRQSFQKS---PQMDRLAIRRLLENSVLSSEGIGWTWISERRQELHVAKKQGFIERVALVLGES---FVQEAFFIDKQQGDLRVLGFLGSPNQ--------HRSTRQGQRLFINNRAVESSFISKKVAEAYAWMIPA--QRYPIFVLKLFLPPMWCDFNVHPQKTEVRLLQEGQISNLLVEAISEALLRRSSSLEEIVLKVP---TEKIPIENEGISVPSIRPAIVSAPLSC--PTFSQQPYLKT 382
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. UniProt/SwissProt
Match: sp|O84579|MUTL_CHLTR (DNA mismatch repair protein MutL OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=mutL PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.570e-37 Identity = 122/398 (30.65%), Postives = 192/398 (48.24%), Query Frame = 2
Query: 80 KMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFI-----QTNLRQ---FYESLPNNINEELPVANDGYNINKL-------PLSCELPT----TYLRT 1210
+++ L+ TV IS+ VI + V+KEL+ENS+DA A I I G +I V D+G G D +VP+ QRH TSKI+ F DI ++ ++GFRGE L SI +IS + I +TA LG + +K G+ + +QGT I V ++F+N+P+R S Q +I L + LS I +++ L + E + V+G S + E + + + + L P+ H ++ LF+N+R E SF+ K V Y RYP VL L LP W D N+ P+K +++L QI++ + + LR+ E++ E++P+ N+G ++ + PLSC PT YL+T
Sbjct: 7 RIRLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRDNGVGMDPEEVPVALQRHATSKIAHFADIFSLASYGFRGEALPSIASISKMEI---HTARAGGLGSKTLIEK-GEPVCCEPAPRQQGTTIAVHSLFYNVPMRQSFQKS---PQMDRLAIRRLLENSVLSSEGIGWTWISECRQELYVAKKQGFIERVALVLGES---FVQEAFFIDKQQGDLRVLGFLGSPNQ--------HRSTRQGQRLFINNRAVESSFISKKVAEAYAWMIPA--QRYPIFVLKLFLPPMWCDFNVHPQKTEVRLLQEGQISNLLVEAISEALLRRSPSLEETVLKVPTEKIPIENEGISVPSIRPAIVSAPLSC--PTFSQQPYLKT 382
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. TrEMBL
Match: A0A1B6K6X2 (DNA_mis_repair domain-containing protein (Fragment) OS=Homalodisca liturata OX=320908 GN=g.45394 PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.083e-49 Identity = 116/354 (32.77%), Postives = 200/354 (56.50%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNL--NRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEE 1132
+ +L +TVKLI SS VI+SV V+KEL+ENSID+ A I I L + GL+KIEV DDGCG D L+C TSKIS+F+D++ ++++GFRGE LS++C ++ +S+ +K T D++ + FD+ GQ+ + +GT ITV+ +F NLPVR Q ++ + LK + + L + + + L+++ ++ ++ ++++ ++ S K H +L E++ ++ + + VPS D + ++ E +LF+N RP + + V + ++ + +YP VL LTLP +DVN++P K ++ L N I DFI+ L +Y ++E+
Sbjct: 3 LAQLPPATVKLIGSSQVITSVSSVVKELMENSIDSGAGHIEIKLDKHGLEKIEVKDDGCGVAKSDATLMCLSSYTSKISDFSDLDCLSSYGFRGEALSALCNVAEVSVTTKTTQDDT--ASCYSFDQNGQVKSSKISHIAKGTIITVTALFKNLPVRRQFMSNAKRAAEELKKVEKVVKSLAVVHPRLRVTLVHNKFLIWQKVSVANLRQSVMQILSLSIVKQLHHIL-----ENSPQVRVEMLVPSRDCDVSCMCFSNFSEASFLFINHRPIRHKEIEQVVYSRLSEYFGVYVPAKKYPISVLSLTLPSDCLDVNLEPNKTRVYLKNQEDILDFIKQCLHLYYGEGAKVVDED 349
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. TrEMBL
Match: A0A218UNH3 (PMS1 1 OS=Lonchura striata domestica OX=299123 GN=PMS1 PE=4 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.892e-49 Identity = 124/353 (35.13%), Postives = 194/353 (54.96%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNR-YPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEE 1132
MK+L T++L+SSS VI+SV V+KEL+ENS+DA A+ I I L+ +G KIEV D+G G DDVP++ +H TSKIS D+E + T+GFRGE L SIC+IS + + +K AD+ + + D G + +Q QGT +TV N+F NLPVR Q Y++ ++ LK + L + + ++ I L ++ V+ S K A V+G + ++ + + E++L+ F+P + D LT E ++F+N+RP + K +R Y + T + R YP L +T+P S VDVNI P+K ++ L + ++ L+ Y LP + E
Sbjct: 1 MKQLPGETIRLLSSSQVITSVVSVVKELIENSLDASATGIDIKLENYGFSKIEVRDNGSGIKVDDVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICSISEVLVTTKTAADDFSI--QYALDSNGHVTSQKPSHLGQGTTVTVLNLFKNLPVRKQFYSTNRKCKEELKKVQDLLTAYGIIKPDLRITLTHNKAVIWQKTRVSDHKMACMSVLGTA---VMSSMVPFQHCCEYPEINLSGFLPKAESDA-SLTSLSSSERSFIFINNRPVLQKEILKLIRQYYSQVTQKECTRLYPVFFLSITVPASAVDVNITPDKTQVLLHYKESVLLAVENVLKSLYGPLPAAVPGE 347
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. TrEMBL
Match: A7RHM2 (Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g82384 PE=4 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.253e-47 Identity = 110/339 (32.45%), Postives = 185/339 (54.57%), Query Frame = 2
Query: 92 LNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFY 1102
L TV I+SS VI+SV +KEL+EN++DA A+ I + L+ +GL+KIEV D+G G DD + QRH TSKI+ F +++++ ++GFRGE L S+CA+SN+S+++K +N +G + D+ G+I A + GT +T N+F NLPVR Q + LK + + L ++ + L ++ +++ K+A+ +IGA+ E++ +D L + FVP D +T + +++VN RP + + + VR Y+K NR+P L + +P VDVN++P K ++ L+ I D ++ +L + Y
Sbjct: 7 LPQDTVHRIASSQVITSVSSAVKELLENALDAGANSIEVKLEEYGLEKIEVRDNGTGIPQDDAQFMAQRHYTSKITTFHNLDSLASYGFRGEALCSLCAVSNVSVMTK--TNNEEVGMCYTLDQHGRISATKPLPLTTGTVVTACNLFKNLPVRKQFSRGNKKCKDELKKVEELIMAFGLIHPSVRLTLRHNKSIIWQKNKCEDLKKALTGIIGANAMSSMEEII---VKDDQTGLRIEGFVPKPGSDP-NVTSRSMGDRSFVYVNKRPVVLKEIAQVVREFYLKIHPTISNRHPVAFLSIEVPPCAVDVNLEPNKSRVLLTEKDIIIDLLRNSLEELY 339
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. TrEMBL
Match: A0A2I4DAP6 (PMS1 protein homolog 1-like OS=Austrofundulus limnaeus OX=52670 GN=LOC106536555 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.780e-47 Identity = 114/344 (33.14%), Postives = 195/344 (56.69%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY-MKFTNQNL-NRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFY 1102
MK+L TV+L+SSS VI+SV V+KEL+ENS+DA AS I + L+ FGLD++EV D+G G +D P++ RH TSKI D+E + T+GFRGE L SICA++ +++ +K D+ + + D G +++Q +GT ++V+ +F NLPVR Q Y+S ++ L+ + L + + + + L+++ VV + + A+ V+G+ + LL ++ E+ L+ F P D T E ++F+N+RP + + K +R Y ++++ + +RYP+ +L +T+P S VDVN+ P+K ++ L N + ++ L Y
Sbjct: 1 MKQLPADTVRLLSSSQVITSVVNVVKELMENSLDAGASSIDVKLENFGLDRVEVRDNGDGIRAEDAPVMAVRHFTSKICSHDDLERLETYGFRGEALGSICAVAEVAVTTKTEEDD--ISTQYTLDLTGAVVSQKPSHVGRGTTVSVTKLFKNLPVRRQYYSSTKRCKEELRKVQDLLMTYAVLKPELRLMLVHNKVVVWQKAKMADARSALLAVLGSGPVAH---LLPCHQRQEQPEIILDGFFPKPGAD-FSSTSSSTPEKTFVFINERPVQQKEIMKLLRQHYSAQYSDDSARHRYPTALLRITVPPSSVDVNVTPDKTQVLLHNKXAVLTAVEALLVSLY 338
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. TrEMBL
Match: A0A444U8P8 (PMS1 protein-like 1 OS=Acipenser ruthenus OX=7906 GN=EOD39_6861 PE=4 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.451e-47 Identity = 115/355 (32.39%), Postives = 197/355 (55.49%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFT--NQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEEL 1135
MK+L TV+L++SS VI+SV V+KELVENS+D+ AS I + L +G D+IEV D+G G + D P++ +H TSKIS D+E++ T+GFRGE L ++CA+S + I++K +D+ + + D G +++Q QGT +TV +F NLPVR Q Y++ ++ LK + L + + + + ++ +V S K A+ V+G + +L + + + E++LN F+P D LT + ++FVN RP + + K VR Y + +R P + + + +P + VD+N+ P+K ++ L N I ++T L Y +LP ++ +++
Sbjct: 1 MKQLPPETVRLLTSSQVITSVLNVVKELVENSLDSGASSIEVKLDNYGFDRIEVRDNGIGIEAADAPVMAVKHYTSKISSHDDLESLETYGFRGEALGALCAVSEVIIITKTASDD--VSTQYTLDFTGNVVSQKPSHLGQGTTVTVLKLFKNLPVRKQFYSTAKKCKEELKKVQDLLMAYAIIKPELRMIFTHNKAIVWQKARVSDHKMALMSVLGTA---LMSSMLPFQHHQVDPEVTLNGFLPKPGSDNT-LTSSSSSDKTFVFVNQRPVHLKEVMKLVRQYYSSQSCRQSAHSRCPVLFMNIVVPAASVDINLTPDKTQVMLQNKENILSAVETILISVYGALPGSVPKDV 349
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Cavefish
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]) HSP 1 Score: 172.94 bits (437), Expect = 1.908e-44 Identity = 117/367 (31.88%), Postives = 195/367 (53.13%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQN----LNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEELPVANDGYNIN 1165
MK L+ TV+L+SSS VI+SV V+KEL+ENS+DA ++ + + L+ +GLD+IEV D+GCG D ++ +H TSKIS D+E + T+GFRGE L+SICAIS + + +K TAD+ V + D G++++Q QGT + +F NLPVR Q Y++ ++ +K + L + + + I ++ V S + A+ V+GA+ LL + ++ E+++ + P D L T + + ++FVN RP + K V+ Y + + R+P +++ + +P S VDVN+ P+K ++ L N + +++ L Y S V ND + I
Sbjct: 1 MKALSAETVRLLSSSQVITSVLNVVKELIENSLDAGSTSLEVKLENYGLDRIEVRDNGCGIKSADASVMAVKHYTSKISCHEDLEHLETYGFRGEALASICAISEVVVTTK-TADDDV-STQYTLDLSGRVISQKPSHLGQGTTVCALKLFKNLPVRRQYYSNSKKCKEEVKKVQDLLMAYAVIKPELRIVFTHNKATVWQKARVSDHRAALMAVLGAASAA---NLLPVQHRQEQPEIAIEGYFPKPNSD-LNSTSSNTSDKTFVFVNSRPVHHKDILKLVKQYYANAAHSSNESASRRFPVLMMNIIVPASNVDVNLTPDKTQVMLQNKDAVLLAVESVLISLYGS--------FSVGNDNHTIG 353
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Cavefish
Match: pms2 (PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]) HSP 1 Score: 144.05 bits (362), Expect = 2.719e-35 Identity = 110/407 (27.03%), Postives = 204/407 (50.12%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDD--VPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLS----RRNIHIKXXXXXXXXXXXPM-----TSSRKEAIPFVIGASKFKY---FHELLKSETTEDNH-----ELSLNLFVPSS----VDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEELPVANDGYNINKLPLSCELPTTYLRTIRPSNLNE 1234
+K ++ +V I S V+ S+ +KELVENS+DA A+ + I LK G + +EV D+G G ++ + +H TSK+ EF+D+ + TFGFRGE LSS+CA+S+LS+++ D++ +G V+D G+++ ++ +QGT +++ +F LPVR + + Q+ +K + + H+ S + I N + + S ++ I + G + + F ++ ++ ++++ +L +LF S D +G + D + + F+N RP + S + K V Y F N ++YP + L + + VDVN+ P+KR+I L + ++++L YE+ N I ++N P +L ++ R + P+ E
Sbjct: 10 IKAIDRHSVHQICSGQVVLSLATAVKELVENSVDAGATNVDIRLKDHGTELVEVTDNGKGVEEENFEGLTLKHHTSKLREFSDLIHVETFGFRGEALSSLCALSDLSVVT--CHDSTSVGTRLVYDHDGRLVQRAPQPRQQGTTVSLQQLFSTLPVRHKEF------QRNIKKEYSKMIHVLQSYCIISTGVRITCTNQIGQGKRNTVLCTSGSQSMRDNIGALFGPKQLQSLIPFQQISPTDNIKEDYGLNGADLPKDLFTISGYVSQADHGVGRSATDRQ---FFFINKRPCDPSKVSKLVNEVYHMF---NRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKFLLAILKSSLISMYETGVNKI-----------SLNHTP---QLSGSFFRPVDPAAAAE 388
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Cavefish
Match: mlh1 (mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]) HSP 1 Score: 115.161 bits (287), Expect = 3.888e-26 Identity = 98/351 (27.92%), Postives = 178/351 (50.71%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMA-QSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHL--YLSRRNIH-------IKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYK-ENC--YLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNL 1090
+++L+++ V I++ VI IKE++EN +DA ++ I + +K GL I++ D+G G +D+ ++C+R TSK+ F D+ +I+T+GFRGE L+SI +++++I +K TAD + D G++ A QGT I+V ++F+N+P R +K LKS + + +SR IH +K + + +S + I V G + + E++ E ++ +L+ L K +++ +Y + C LF+N R E S L KA+ T Y + +N +P + L L + +DVN+ P K ++ + I + IQ ++
Sbjct: 5 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVTVKEGGLKLIQIQDNGTGIRKEDLEIVCERFTTSKLQTFEDLTSISTYGFRGEALASISHVAHVTITTK-TADGKCAYRGNYCD--GKLKAPPKPCAGNQGTLISVEDLFYNVPTR----------RKALKSPSEEYSRIVEVMSRYAIHNSGKSFTVKKQGEMVADVKTLPNASVLDNIRVVFGVAVSR---EMI--EVGCEDQKLAFKL--------KGYISNANYSVKKCIFILFINHRLVESSALKKAIETVYTAYLPKNT--HPFLYLSLEIAPHNIDVNVHPTKHEVHFLHEDCIIESIQKHI 327
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Cavefish
Match: mlh3 (mutL homolog 3 [Source:NCBI gene;Acc:103038515]) HSP 1 Score: 82.4185 bits (202), Expect = 1.229e-15 Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 2
Query: 107 VKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNL-SILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQK 583
KL S V S +CV +ELV NSIDA A+ I + + K++VID+G G +D+ + R+CTSK S D++ + +GFRGE ++SI ++S L I S+ A K + + + GT + + N FHN+PVR + +S+ +++
Sbjct: 11 AKLRSGVAVFSLQQCV-EELVLNSIDAGATCIAVKID-IEACKVQVIDNGSGMSREDMEKVGTRYCTSKCSSLEDLDDLRFYGFRGEAIASIASLSTLVEISSQTKASVKTFVKTFNEGRGSGVCEVQDTRPSPGTTVLICNFFHNMPVRRKRMDSVLEVER 170
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Sea Lamprey
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030616-528]) HSP 1 Score: 176.792 bits (447), Expect = 3.267e-46 Identity = 118/347 (34.01%), Postives = 184/347 (53.03%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKF--TNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESL 1111
MK+L+ TV+L+SS+ V SSV V+KEL+ENS+DA A+ + I L+ +G DKIEV D+G G +D + RH TSKIS D+E I T+GFRGE L SICA++ +SI + TA++ V + D G + ++ +GT + ++ +F NLPVR Q Y++ ++ LK I L + +I L ++ VV P + ++ A+ +G + ++ + +LS++ FVP D G+T + C L +N RP L K VR Y ++ YP L L++P + +DVN+ P+K ++ L N I + L Q Y L
Sbjct: 1 MKQLSAETVRLLSSAQVASSVWSVVKELLENSLDAHATSVEIKLENYGFDKIEVRDNGDGVRSEDTQFMAVRHYTSKISSHEDLEDIATYGFRGEGLGSICAVAEVSI-TTCTAEDEV-SMIYSLDSQGHVTSRKPSHLGKGTTVCITKLFKNLPVRKQFYSTAKKCKEELKKIEDLLVAYGVIHPDIRFSLAHNKAVVWQKPRVADQRTALLRCLGTT---VMGSMIPVQHQASTMQLSISGFVPKPGADP-GITSSTSSDRCLLAINGRPVHYKDLLKLVRQYYRNTSPSSSTHTHYPVFFLSLSIPANTIDVNLTPDKMQVMLHNKEAILAELDEMLLQVYGPL 341
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Sea Lamprey
Match: mlh1 (mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]) HSP 1 Score: 118.627 bits (296), Expect = 9.860e-28 Identity = 101/357 (28.29%), Postives = 173/357 (48.46%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMA-QSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHL--YLSRRNIH-------IKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENC---------YLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNL 1090
+++L+++ V I++ VI IKE++EN +DA A+ I + +K GL I++ D+G G +D+ ++C+R TSK+ +F D+ +I TFGFRGE L+SI +++++I +K TAD+ + D G++ A QGT IT ++F+N+ R +K LKS + + +SR +IH +K ++ + ++ + I V GAS + E E N+E D KL L Y N LF+N R + + L KA+ Y + + N +P + + L L VDVN+ P K ++ + IT+ +Q ++
Sbjct: 8 IRRLDEAVVNRIAAGEVIQRPANAIKEMMENCLDAKATSIQVTVKNGGLKLIQIQDNGTGIRKEDMEIVCERFTTSKLEKFEDLSSIATFGFRGEALASISHVAHVTITTK-TADSMCAYRAMYCD--GKLKAPPKPCAGNQGTQITAEDLFYNVATR----------RKALKSASEEHGKITEVVSRYSIHYSGVSFTLKKQGESTADVRTLPGATTVDNIRAVYGAS--------VARELIEVNYE-----------DKKLVLKMRGYISNANYSMKKCVFLLFINHRLVDSTALRKAIEMVYAAYLPK--NSHPFLYISLELAPQNVDVNVHPTKHEVHFLHEDSITEAVQQHV 330
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Sea Lamprey
Match: mlh3 (mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]) HSP 1 Score: 75.0998 bits (183), Expect = 5.181e-14 Identity = 49/151 (32.45%), Postives = 85/151 (56.29%), Query Frame = 2
Query: 116 ISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLD--KIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISN-LSILSKNTADNSVLGKNWVFDKMGQIMAQSA--VTCKQGTAITVSNIFHNLPVR 547
+ S +S+ ++EL+ NS+DA AS + R +D + +V+D+G G +D+ ++ R+ TSK + D+E + +G+RGE L+SI ++S+ + I S+ T+ + K V M ++ A + GT +TV N F+NLPVR
Sbjct: 13 LRSGVALSTASQCVEELLLNSLDAGASCV---AARLHMDDFRFQVVDNGNGITSNDLQVLGNRYFTSKCHKIKDLENLRYYGYRGEALASIASVSSVVEITSRATSSSRTYTK--VIQDMQSVIVHEAEKIRPSHGTTVTVHNFFYNLPVR 158
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Sea Lamprey
Match: mlh3 (mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]) HSP 1 Score: 74.7146 bits (182), Expect = 5.371e-14 Identity = 49/151 (32.45%), Postives = 85/151 (56.29%), Query Frame = 2
Query: 116 ISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLD--KIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISN-LSILSKNTADNSVLGKNWVFDKMGQIMAQSA--VTCKQGTAITVSNIFHNLPVR 547
+ S +S+ ++EL+ NS+DA AS + R +D + +V+D+G G +D+ ++ R+ TSK + D+E + +G+RGE L+SI ++S+ + I S+ T+ + K V M ++ A + GT +TV N F+NLPVR
Sbjct: 13 LRSGVALSTASQCVEELLLNSLDAGASCV---AARLHMDDFRFQVVDNGNGITSNDLQVLGNRYFTSKCHKIKDLENLRYYGYRGEALASIASVSSVVEITSRATSSSRTYTK--VIQDMQSVIVHEAEKIRPSHGTTVTVHNFFYNLPVR 158
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Sea Lamprey
Match: mlh3 (mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]) HSP 1 Score: 74.7146 bits (182), Expect = 6.788e-14 Identity = 49/151 (32.45%), Postives = 85/151 (56.29%), Query Frame = 2
Query: 116 ISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLD--KIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISN-LSILSKNTADNSVLGKNWVFDKMGQIMAQSA--VTCKQGTAITVSNIFHNLPVR 547
+ S +S+ ++EL+ NS+DA AS + R +D + +V+D+G G +D+ ++ R+ TSK + D+E + +G+RGE L+SI ++S+ + I S+ T+ + K V M ++ A + GT +TV N F+NLPVR
Sbjct: 13 LRSGVALSTASQCVEELLLNSLDAGASCV---AARLHMDDFRFQVVDNGNGITSNDLQVLGNRYFTSKCHKIKDLENLRYYGYRGEALASIASVSSVVEITSRATSSSRTYTK--VIQDMQSVIVHEAEKIRPSHGTTVTVHNFFYNLPVR 158
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Yeast
Match: PMS1 (ATP-binding protein required for mismatch repair; required for both mitosis and meiosis; functions as a heterodimer with Mlh1p; binds double- and single-stranded DNA via its N-terminal domain, similar to E. coli MutL [Source:SGD;Acc:S000005026]) HSP 1 Score: 160.999 bits (406), Expect = 2.222e-41 Identity = 114/363 (31.40%), Postives = 184/363 (50.69%), Query Frame = 2
Query: 80 KMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHH------LYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHEL------------LKSETTEDNHELSLN--LFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFY 1102
++ ++ND V I+S VI+ + +KELV+NSIDA A++I I K +GL+ IE D+G G D + + +H TSKI++F D+ + T GFRGE LSS+C I+ LS+++ + + +D +G I +++ + +GT + VS +FHNLPVR + ++ F Q T K +T + + S NI K + + SS ++ I V GA + E+ + + T+D L L+ + V + + K+ +++VN RP E S L K Y F N ++P++ L L LP S +DVN+ P+KR I L N + D +T L +Y
Sbjct: 3 QIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKA---DKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFT-KCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMR--NSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNV---QFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDYY 356
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Yeast
Match: MLH1 (Protein required for mismatch repair in mitosis and meiosis; also required for crossing over during meiosis; forms a complex with Pms1p and Msh2p-Msh3p during mismatch repair; human homolog is associated with hereditary non-polyposis colon cancer [Source:SGD;Acc:S000004777]) HSP 1 Score: 105.916 bits (263), Expect = 5.039e-24 Identity = 57/165 (34.55%), Postives = 97/165 (58.79%), Query Frame = 2
Query: 77 FKMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNS 565
++K L+ S V I++ +I S +KE++ENSIDA A+ I I +K G+ +++ D+G G + D+P++C+R TSK+ +F D+ I T+GFRGE L+SI ++ +++ +K D ++ KM + + V K GT I V ++F N+P R + S
Sbjct: 3 LRIKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGSGINKADLPILCERFTTSKLQKFEDLSQIQTYGFRGEALASISHVARVTVTTKVKEDRCAWRVSYAEGKM--LESPKPVAGKDGTTILVEDLFFNIPSRLRALRS 165
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Yeast
Match: MLH2 (Protein involved in mismatch repair and meiotic recombination; only certain frameshift intermediates are mismatch repair substrates; forms a complex with Mlh1p [Source:SGD;Acc:S000004025]) HSP 1 Score: 95.9005 bits (237), Expect = 7.508e-21 Identity = 65/191 (34.03%), Postives = 101/191 (52.88%), Query Frame = 2
Query: 98 DSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKR--FGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGE---VLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIM--AQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIH 643
+S K++SSS++ V V +EL++NSID+ A ++FI++ G + I V DDG G D D P +C + TSK+S DI + T GFRGE +LS++C + TAD+ V+G+ W+ D G I + V+C GT + + + L R +S +KT + ++H L RNI
Sbjct: 9 ESQWKIVSSSFIYGPVAAV-RELLDNSIDSGAKKVFIDVDSTTGGCEYISVKDDGSGVDIIDRPSMCLEYTTSKMSSLGDISILTTLGFRGEALFLLSNLCNQKGSMQVETKTADD-VIGEKWLVDSKGGITNGKRYKVSCPVGTTVILRKLLGGLRARYLEISSR--PRKTFDELIYLINHYSLIHRNIR 195
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Yeast
Match: MLH3 (Protein involved in DNA mismatch repair and meiotic recombination; involved in crossing-over during meiotic recombination; forms a complex with Mlh1p; mammalian homolog is implicated mammalian microsatellite instability [Source:SGD;Acc:S000006085]) HSP 1 Score: 73.559 bits (179), Expect = 6.240e-14 Identity = 53/170 (31.18%), Postives = 88/170 (51.76%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNS-----------VLGKNWVF--DKMGQIMAQSAVTCKQGTAITVSNIFHNLPVR 547
++KL+ + + S S+ ++E+V+NS+DA A+ I + + L V DDG G D+ ++ ++ TSKI + D+ T+ T+G+RG+ L SI +SNL + SK NS +L +N + D +I S K GT + V ++ +NLPVR
Sbjct: 5 IRKLDSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMIDLPNLS-FAVYDDGIGLTRSDLNILATQNYTSKIRKMNDLVTMKTYGYRGDALYSISNVSNLFVCSKKKDYNSAWMRKFPSKSVMLSENTILPIDPFWKICPWSRT--KSGTVVIVEDMLYNLPVR 171
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Nematostella
Match: EDO49003 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHM2]) HSP 1 Score: 182.956 bits (463), Expect = 1.732e-51 Identity = 110/339 (32.45%), Postives = 185/339 (54.57%), Query Frame = 2
Query: 92 LNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFY 1102
L TV I+SS VI+SV +KEL+EN++DA A+ I + L+ +GL+KIEV D+G G DD + QRH TSKI+ F +++++ ++GFRGE L S+CA+SN+S+++K +N +G + D+ G+I A + GT +T N+F NLPVR Q + LK + + L ++ + L ++ +++ K+A+ +IGA+ E++ +D L + FVP D +T + +++VN RP + + + VR Y+K NR+P L + +P VDVN++P K ++ L+ I D ++ +L + Y
Sbjct: 7 LPQDTVHRIASSQVITSVSSAVKELLENALDAGANSIEVKLEEYGLEKIEVRDNGTGIPQDDAQFMAQRHYTSKITTFHNLDSLASYGFRGEALCSLCAVSNVSVMTK--TNNEEVGMCYTLDQHGRISATKPLPLTTGTVVTACNLFKNLPVRKQFSRGNKKCKDELKKVEELIMAFGLIHPSVRLTLRHNKSIIWQKNKCEDLKKALTGIIGANAMSSMEEII---VKDDQTGLRIEGFVPKPGSDP-NVTSRSMGDRSFVYVNKRPVVLKEIAQVVREFYLKIHPTISNRHPVAFLSIEVPPCAVDVNLEPNKSRVLLTEKDIIIDLLRNSLEELY 339
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Nematostella
Match: EDO34014 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQJ8]) HSP 1 Score: 134.035 bits (336), Expect = 2.140e-32 Identity = 103/360 (28.61%), Postives = 187/360 (51.94%), Query Frame = 2
Query: 92 LNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHI----KXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKY---FHELLKSETTEDNHELSLNL-------------FVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYE 1105
++ +V I S V+ ++ +KEL+ENS+DA A+ + + LK G IEV D+G G + + + +H TSK+ +F+D+ + TFGFRGE LSS+CA+S+LSI +++ + + G +D G++ ++ +QGT +TV N+F LPVR + + L ++K + L L I + + V++ +S K+ I V G + + F +L SE ED EL+L++ F+ S D G + D + + F+N RP ++ + + V Y + N +++P ++L ++L + VDVN+ P+KR++ L + ++T+L + ++
Sbjct: 19 IDRKSVHQICSGQVVLNLATAMKELLENSLDAGATSVDVRLKEHGSHSIEVSDNGAGVEPQNFEALTLKHYTSKLKDFSDLSAVETFGFRGEALSSLCALSDLSITTRHISQTA--GTKLDYDHNGKLKSKLPCAREQGTMVTVLNLFSTLPVRHKEF--LRNIKKEFVKLVHVLQGYCLISAGTRITCTNHVSGRRSTVVSTHGSSQIKDNITAVFGPKQVQSLLPFKQLQPSE--EDCTELNLSVVSNSETNPFTITGFI-SKADHGSGRSSSDRQ---FFFINKRPCDLPKVSRVVSEVYHMY---NRHQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQETLLLATLRTSLIKMFD 365
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Nematostella
Match: EDO31419 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SXZ4]) HSP 1 Score: 132.88 bits (333), Expect = 4.632e-32 Identity = 102/360 (28.33%), Postives = 185/360 (51.39%), Query Frame = 2
Query: 92 LNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSR----KEAIPFVIGASKFKY---FHELLKSETTEDNHELSLNL-------------FVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYE 1105
++ +V I S V+ S+ +KEL+ENS+DA A+ + + LK G IEV D+G G + + + +H TSK+ +F+D+ + TFG+RGE LSS+CA+S+LSI +++ + + G +D G++ ++ +QGT +TV N+F LPVR + + L ++K + L L I N + +++ K+ I V G + + F +L SE ED EL+L++ F+ S D G + D + + F+N RP ++ + + V Y + N +++P ++L ++L + VDVN+ P+KR++ L + ++T+L + ++
Sbjct: 19 IDRKSVHQICSGQVVLSLATAMKELLENSLDAGATSVDVRLKEHGSHSIEVSDNGAGVEPQNFEALTLKHYTSKLKDFSDLSAVETFGYRGEALSSLCALSDLSITTRHISQTA--GTKLDYDHNGKLKSKLPCAREQGTMVTVLNLFSTLPVRHKEF--LRNIKKEFVKLVHVLQGYCLISAGTRITCSNHVAGKRSTVVSTHGSLQIKDNITAVFGPKQVQSLLPFKQLQPSE--EDCTELNLSVVSNSESNPFTITGFI-SKADHGSGRSSSDRQ---FFFINKRPCDLPKVSRVVSEVYHMY---NRHQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQEKLLLATLRTSLIKMFD 365
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Nematostella
Match: EDO39827 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8W4]) HSP 1 Score: 109.383 bits (272), Expect = 1.324e-24 Identity = 91/355 (25.63%), Postives = 174/355 (49.01%), Query Frame = 2
Query: 74 IFKMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKM-----GQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHL--YLSRRNIH-------IKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDY---KENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQ 1081
I ++KL+++ V I++ VI +KE++EN +DA ++ I + +K GL +++ D+GCG +D+ ++C+R TSK+S+F D+ +I+T+GFRGE L+SI +++++I +K + ++ K+ G +GT ITV ++F+N+ R +K LKS + +S+ +IH +K + + T+S + I + G + + EL+ + DN L + K +T+ +Y K LF+N R + + L +++ T Y + + +P + + L + S VDVN+ P K ++ + I + +Q
Sbjct: 4 IPSIRKLDETVVNRIAAGEVIQRPANALKEMIENCLDAKSTSITVTVKSGGLKLLQIQDNGCGIRKEDMHIVCERFTTSKLSKFEDLSSISTYGFRGEALASISHVAHVTITTKTAHSSCAYKASYSDGKLVPPRPGLPAEPKPCAGNKGTQITVEDLFYNVATR----------RKALKSPGEEYSKVVDVVSKYSIHNTGVAFTLKKQGEATADVRTTSTASLHDNIRAIYGTAVAR---ELVDIDC--DNSRLGFYM--------KGCITNANYSVKKLIFLLFINHRLVDSTALRRSLETVYEAYLPKGT--HPFVYMSLQITPSNVDVNVHPTKHEVHFLHEDAIVEAVQ 333
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Nematostella
Match: EDO46831 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RP06]) HSP 1 Score: 80.4925 bits (197), Expect = 2.545e-16 Identity = 51/174 (29.31%), Postives = 96/174 (55.17%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACAS--RIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSS---ICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQK 583
++ L+ + S IS++ I ELV N++DA AS + +++ F +++V D+G G D++ ++ QR+CTSK +D+ ++++GFRGE L+S IC + L I++K+++ K + K + GT +T+ +IF NLPVR ++ +S+ ++
Sbjct: 2 IRHLDTGIRSHLRSGVAISTLTQAIDELVTNALDAGASCINVHVDIPSF---RVQVSDNGSGITKDNLEILGQRYCTSKCHSLSDLRKLSSYGFRGEALASIRDICGV--LEIVTKHSSSYKTYCKLFRSGKPLTVTQSCFPRSNTGTTVTIHDIFSNLPVRRKLLSSVLDFER 170
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Medaka
Match: pms1 (PMS1 homolog 1, mismatch repair system component [Source:NCBI gene;Acc:101157983]) HSP 1 Score: 179.874 bits (455), Expect = 1.710e-46 Identity = 119/355 (33.52%), Postives = 192/355 (54.08%), Query Frame = 2
Query: 71 KIF-KMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTY--MKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNN 1120
+IF MK L +V+L+SSS VI+SV V+KEL+ENS+DA AS I + L+ FGLD+IEV D+G G D ++ RH TSKI D+E + T+GFRGE L SICA++ L + +K D+ + + D G+I+AQ QGT++T +F NLPVR Q Y S ++ LK + L + + + + L+++ VV + + A+ +G S LL+ ++ E+ L+ F+P D T + +L+VN+RP ++ + K +R Y + NRYP ++L +T+ S +DVN+ P+K ++ L + + ++ L Y P++
Sbjct: 78 RIFGAMKLLPPDSVRLLSSSQVITSVVNVVKELLENSLDAGASSIDVKLENFGLDRIEVRDNGHGVKAADASVMAVRHFTSKICSHEDLEHLETYGFRGEALGSICAVAELIVTTKTEEDD--ISTQYTLDPTGKIVAQKPSHLGQGTSVTALKLFKNLPVRRQYYTSTKKCKEELKKVQDLLITYAIIKPELRLSLVHNKVVVWQKTKVADNRSALLATLGPS---VVANLLQCHQQQEEPEIILDGFLPKPGAD-YSSTSSSAPDKTFLYVNNRPVQLKEIMKLLRQHYCAQYLEDAVRNRYPILMLNITVSPSSLDVNLTPDKSQVLLHDKEAVLTAVEALLVSLYGFRPSS 426
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Medaka
Match: pms2 (PMS1 homolog 2, mismatch repair system component [Source:NCBI gene;Acc:101169320]) HSP 1 Score: 151.754 bits (382), Expect = 1.294e-37 Identity = 114/377 (30.24%), Postives = 193/377 (51.19%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDDVPL--ICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNS---------LFVLQK-TLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKY---FHELLKSETTEDNHEL----------SLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEELP 1138
+K ++ +V I S V+ S+ +KELVENS+DA A+ I I L+ G+++IEV D+G G + + +H TSK+ +F+D+ + TFGFRGE LSS+CA+S+LS+++ ++S +G VFD GQ++ +S +QGT + + +FH LPVR + + + VLQ + S L S R + +L+ + + S +E I + G + + F + SE + + L S+ F+ S D +G + D + + F+N+RP + + K V Y + N ++YP + L + + VDVN+ P+KR+I L + ++T+L YE+ N I+ LP
Sbjct: 13 IKAIDKHSVHQICSGQVVLSLATAVKELVENSVDAGATNIDIKLRDCGVEQIEVSDNGKGVKEANFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVIT--CHESSQVGTKLVFDHKGQLVQKSPHPRQQGTTVALQQLFHTLPVRHKEFQRNIKKEYAKMIHVLQAYCIISAGVRLTCSNQSGRGKRVTVLSTSG-------SQSMRENIGAIFGPKQLQSLLPFQQTSPSENVLEEYGLKEAELPEQLFSIAGFI-SRSDHGVGRSATDRQ---FFFINNRPCDPLKITKVVNEVYHSY---NRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKVLLATLKTSLINMYEAGVNKISLNLP 373
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Medaka
Match: mlh1 (mutL homolog 1 [Source:NCBI gene;Acc:111948792]) HSP 1 Score: 107.071 bits (266), Expect = 1.552e-23 Identity = 93/349 (26.65%), Postives = 157/349 (44.99%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHL--YLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENC---------YLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNL 1090
+++L+++ V I++ VI +KE++EN +DA A+ I + +K GL +++ D+G G DD+ ++C+R TSK+ F D+ +I T+GFRGE L+SI +++++I +K TAD + D + QGT I V ++F+N+ R +K LKS + +SR IH + + R +P AS + + +S L D KL Y N LF+N R E S L KAV T Y + + +P + L L + VDVN+ P K ++ + + + +Q ++
Sbjct: 5 IRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKATNIQVTVKDGGLKLLQIQDNGTGIRKDDMEIVCERFTTSKLQTFEDLSSIATYGFRGEALASISHVAHVTITTK-TADAKCAYRASYRDGKPR-GPPKPCAGNQGTQIMVEDLFYNVSTR----------RKALKSPADEYSRIVEVVSRYAIHNSGKSLTVKKQGETVADVR--TLP---NASVVDNIRSVF-------GNAVSRELIQVGCEDPKLAFKMSGYISNANYSVKKYVFILFINHRLVESSALKKAVETVYAAYLPKKT--HPFLYLSLEISPQNVDVNVHPTKHEVHFLHEDSVIESVQKHI 327
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Medaka
Match: mlh3 (mutL homolog 3 [Source:NCBI gene;Acc:101166595]) HSP 1 Score: 80.1073 bits (196), Expect = 6.590e-15 Identity = 50/157 (31.85%), Postives = 87/157 (55.41%), Query Frame = 2
Query: 116 ISSSYVISSVECVIKELVENSIDACAS--RIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNL-SILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLF 571
+ S I S++ ++ELV NSIDA A+ + ++L+ F K++VID+G G +++ + R+ TSK D++ + + GFRGE L+SI +++ L I S++ A L K + + + V GT + V N FHN+PVR + +++
Sbjct: 26 LRSGVAIPSLQQCVEELVLNSIDAGATCVGVRMDLEAF---KVQVIDNGAGMNTENMQRVGNRYHTSKCGSLEDLDNVKSHGFRGEALASIVSMATLVEISSRSRASAKTLVKLFKDGRGVDVFEAETVRPSAGTTVIVCNFFHNMPVRRRRLDAVL 179
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Planmine SMEST
Match: SMESG000066771.1 (SMESG000066771.1) HSP 1 Score: 1408.28 bits (3644), Expect = 0.000e+0 Identity = 728/737 (98.78%), Postives = 733/737 (99.46%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEELPVANDGYNINKLPLSCELPTTYLRTIRPSNLNEISDIFSSTDASLTEENESNKTFQTDQNEIPSTKESRFEFNQDFALGKSNEIIDHPVRNVNLKRAISDINKEIKDKRSKMENNSQKLPELNFINQVPISKSTKESSSNVKCLVHLCLDSLDXXXXXXXXXXXXXXXLRIVASWDSFVICYEFRSSEDQKLHETQDLVFFRKEQFIFTSIYFVNISGMQIPAFKLSSPYLIGSNHGDLVENLLKLPVQLIYNRITGDKFNVISCPHLIKNGYRIHHIKNNDNNCFEITTKPEFIDENVLVDEIRLILAQSSDSPNIIRTRAGRQWIYSASLSEAKLKIDDEIKKLTEKRLNEFFKCCMSNINRCRLSERLDEHLPELFRVSLNKC 2293
MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNS LGKNWVFDKMGQIMA SAVTCKQGT ITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKLLNDNNVVLNLPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHE+SLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLR+FYESLPNN+NEELPVAN+GYNINKLPLSCELPTTYLRTIRPSNLNEISDIFSSTDASLTEENESNKTFQTDQNEI STKESRFEFNQDFALGKSNEIIDHPVRNVNLKRAISDINKEIKDKR+KMENNSQKLPELNFINQVPISKSTKESSSNVKCLVHLCLDSLDNKSRSVRNVMNVNNNLRIVASWDSFVICYEFRSSEDQKLHETQDLVFFRKEQFIFTSIYFVNISGMQIPAFKLSSPYLIGSNHGDLVENLLKLPVQLIYNRITGDKFNVISCPHLIKNGYRIHHIKNNDNNCFEITTKPEFIDENVLVDEIRLILAQSSDSPNIIRTRAGRQWIYSASLSEAKLKIDDEIKKLTEKRLNEFFKCCMSNINRCRLSERLDEHLPELFRVSLNKC
Sbjct: 1 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSALGKNWVFDKMGQIMAHSAVTCKQGTTITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKLLNDNNVVLNLPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHEMSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRKFYESLPNNVNEELPVANNGYNINKLPLSCELPTTYLRTIRPSNLNEISDIFSSTDASLTEENESNKTFQTDQNEIHSTKESRFEFNQDFALGKSNEIIDHPVRNVNLKRAISDINKEIKDKRTKMENNSQKLPELNFINQVPISKSTKESSSNVKCLVHLCLDSLDNKSRSVRNVMNVNNNLRIVASWDSFVICYEFRSSEDQKLHETQDLVFFRKEQFIFTSIYFVNISGMQIPAFKLSSPYLIGSNHGDLVENLLKLPVQLIYNRITGDKFNVISCPHLIKNGYRIHHIKNNDNNCFEITTKPEFIDENVLVDEIRLILAQSSDSPNIIRTRAGRQWIYSASLSEAKLKIDDEIKKLTEKRLNEFFKCCMSNINRCRLSERLDEHLPELFRVSLNKC 737
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Planmine SMEST
Match: SMESG000066771.1 (SMESG000066771.1) HSP 1 Score: 1096.26 bits (2834), Expect = 0.000e+0 Identity = 576/585 (98.46%), Postives = 581/585 (99.32%), Query Frame = 2
Query: 83 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRQFYESLPNNINEELPVANDGYNINKLPLSCELPTTYLRTIRPSNLNEISDIFSSTDASLTEENESNKTFQTDQNEIPSTKESRFEFNQDFALGKSNEIIDHPVRNVNLKRAISDINKEIKDKRSKMENNSQKLPELNFINQVPISKSTKESSSNVKCLVHLCLDSLDXXXXXXXXXXXXXXXLRIVASWDSFVICYEFRSSEDQKLHETQDLVFFRKEQFIFTSIYFVNISGMQIPAFKLSSPYLIGS 1837
MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNS LGKNWVFDKMGQIMA SAVTCKQGT ITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKLLNDNNVVLNLPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHE+SLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLR+FYESLPNN+NEELPVAN+GYNINKLPLSCELPTTYLRTIRPSNLNEISDIFSSTDASLTEENESNKTFQTDQNEI STKESRFEFNQDFALGKSNEIIDHPVRNVNLKRAISDINKEIKDKR+KMENNSQKLPELNFINQVPISKSTKESSSNVKCLVHLCLDSLDNKSRSVRNVMNVNNNLRIVASWDSFVICYEFRSSEDQKLHETQDLVFFRKEQFIFTSIYFVNISGMQIPAFKLSSPYLIGS
Sbjct: 1 MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFDDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSALGKNWVFDKMGQIMAHSAVTCKQGTTITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKLLNDNNVVLNLPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHEMSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQTNLRKFYESLPNNVNEELPVANNGYNINKLPLSCELPTTYLRTIRPSNLNEISDIFSSTDASLTEENESNKTFQTDQNEIHSTKESRFEFNQDFALGKSNEIIDHPVRNVNLKRAISDINKEIKDKRTKMENNSQKLPELNFINQVPISKSTKESSSNVKCLVHLCLDSLDNKSRSVRNVMNVNNNLRIVASWDSFVICYEFRSSEDQKLHETQDLVFFRKEQFIFTSIYFVNISGMQIPAFKLSSPYLIGS 585
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Planmine SMEST
Match: SMESG000004803.1 (SMESG000004803.1) HSP 1 Score: 127.487 bits (319), Expect = 3.385e-30 Identity = 111/369 (30.08%), Postives = 185/369 (50.14%), Query Frame = 2
Query: 143 VECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGFD--DVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHI---KXXXXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDN-HELSLNLFVPSSVD--DKLGLT----------HCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQI---------TDFIQTNLRQFYESLPNNINEELPVA-NDGYNIN 1165
+ IKEL+ENS+DA + +I I LK FG D IEV+D+G G + R+ TSK+ F D+ + TFGFRGE L+S+C + ++ I + N+ S+ G FD+ G+I++ ++V ++GT +++ NIFH LPVR + + L L++ + L + I K+ + V+L+ E I V G ++ EL TTE N ++ L+ F S V +K+ L+ +L+VN RP E+ + + + Y N P+ V+ ++LPK VDVNI+P+KR + L N ++ + F+++ Q Y S+ ++E + N+ Y +N
Sbjct: 1 MAAAIKELIENSLDADSGKIEIRLKNFGADIIEVLDNGTGISPHEFDKFTSRNTTSKLENFDDLNNLETFGFRGEALNSLCFLGDVEIHT-NSLTTSI-GSLLKFDQYGKIISLNSVARQKGTTVSIRNIFHTLPVRRKQF--LGNLKREFDKALNYITSYCLICEGVQISCCKIDKNKQVILSTRGIGGISENIKSVFGQNQLNGMIEL----TTEHNINQDILDEFNISKVANLEKIELSGWISQPTEVFKSSNSSKQFLYVNRRPCELPKVKRLIAECYRVMNKTN---NPTFVISISLPKETVDVNIEPDKRILLLDNQSEVFAVIKASILSCFLKSGYSQEYRSINQTLSESVNSKFNNNYTLN 358
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Planmine SMEST
Match: SMESG000011828.1 (SMESG000011828.1) HSP 1 Score: 118.242 bits (295), Expect = 3.416e-27 Identity = 93/342 (27.19%), Postives = 167/342 (48.83%), Query Frame = 2
Query: 71 KIFKMKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDKIEVIDDGCGF--DDVPLICQRHCTSKISEFTDIETINTFGFRGEVLSSICAISNLSILSKNTADNSVLGKNWVFDKMGQIMAQSAVTCKQGTAITVSNIFHNLPVRCQMYNSLFVLQKTLKSITTNLHHLYLSRRNIHIKXX---XXXXXXXXXPMTSSRKEAIPFVIGASKFKYFHELLKSETTEDNHELSLNLFVPSSVDDKLGLTHCDYKENCYLFVNDRPAEVSFLFKAVRTTYMKFTNQNLNRYPSMVLYLTLPKSWVDVNIDPEKRKIKLSNTLQITDFIQ 1081
+I ++KKL+D+ + I++ +I IKEL+ENS+DA +++I I++K+ GL I++ D+G G +D P++C++ TSK+ EF D+ TI+TFGFRGE L+S+ ++++ I SK +S F + GT + V ++F+N+P+R S + + +N L + +I +K + ++ + + +S ++ + + G EL K T D L+ F+ + + + K LF+N R L K++ Y + + YP L+L LP +DVN+ P K ++ + I IQ
Sbjct: 3 EIKRIKKLDDNVINKIAAGEIIQRPANAIKELLENSLDANSTQIIISVKQGGLGVIQIQDNGSGICKEDFPILCEKFTTSKLQEFHDLLTISTFGFRGEALASVTHVAHVQITSKTI--DSPCAYKAEFSNSKLLKPPKPCAGNTGTIVRVEDLFYNIPIRKASLKSAREEYSKIIEVVSNYAILNAHKCSITLKKIDDNATSSPDVRIVAETSIEDCVVELFGG-------ELSKQLLTIDLKNDKLDFFLSGRISKP---NYNNRKFRFILFINQRLVHCDLLKKSIENVYGNLLPK--HTYPFAFLHLQLPSKNIDVNVHPTKFEVHFLHQELIVASIQ 330 The following BLAST results are available for this feature:
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 3
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 4
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 4
BLAST of PMS1 protein-like protein 1 DNA mismatch repair protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30028625 ID=SMED30028625|Name=PMS1 protein-like protein 1 DNA mismatch repair protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2335bpback to top protein sequence of SMED30028625-orf-1 >SMED30028625-orf-1 ID=SMED30028625-orf-1|Name=SMED30028625-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=738bp MKKLNDSTVKLISSSYVISSVECVIKELVENSIDACASRIFINLKRFGLDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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