Neur_chan_LBD domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30028543 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 52.373 bits (124), Expect = 1.092e-6 Identity = 58/257 (22.57%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 261 VCVVF-LKIGEIDTIKE---QYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENT--IGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS 1001 VCV + I ID + E Y + + WR+ RL ++ L N +L++ +T + + K V+ + + N + + R++ ++L +P D Q+ T+ I S +T+ D + R ++ + L + E + ++ + P +S+ R R YFI ++ + LI LS V+F ++ R+ L T VLT+ + + LPKI Y+ +D Y++ Sbjct: 61 VCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD-----DIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 312
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 52.373 bits (124), Expect = 1.203e-6 Identity = 58/257 (22.57%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 261 VCVVF-LKIGEIDTIKE---QYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENT--IGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS 1001 VCV + I ID + E Y + + WR+ RL ++ L N +L++ +T + + K V+ + + N + + R++ ++L +P D Q+ T+ I S +T+ D + R ++ + L + E + ++ + P +S+ R R YFI ++ + LI LS V+F ++ R+ L T VLT+ + + LPKI Y+ +D Y++ Sbjct: 28 VCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD-----DIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 279
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 52.373 bits (124), Expect = 1.406e-6 Identity = 58/257 (22.57%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 261 VCVVF-LKIGEIDTIKE---QYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENT--IGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS 1001 VCV + I ID + E Y + + WR+ RL ++ L N +L++ +T + + K V+ + + N + + R++ ++L +P D Q+ T+ I S +T+ D + R ++ + L + E + ++ + P +S+ R R YFI ++ + LI LS V+F ++ R+ L T VLT+ + + LPKI Y+ +D Y++ Sbjct: 117 VCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD-----DIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 368
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GABRB3 (gamma-aminobutyric acid type A receptor beta3 subunit [Source:HGNC Symbol;Acc:HGNC:4083]) HSP 1 Score: 51.9878 bits (123), Expect = 1.407e-6 Identity = 58/257 (22.57%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 261 VCVVF-LKIGEIDTIKE---QYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENT--IGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS 1001 VCV + I ID + E Y + + WR+ RL ++ L N +L++ +T + + K V+ + + N + + R++ ++L +P D Q+ T+ I S +T+ D + R ++ + L + E + ++ + P +S+ R R YFI ++ + LI LS V+F ++ R+ L T VLT+ + + LPKI Y+ +D Y++ Sbjct: 61 VCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD-----DIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 312
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Match: GLRA1 (glycine receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4326]) HSP 1 Score: 50.8322 bits (120), Expect = 3.177e-6 Identity = 61/267 (22.85%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 264 CVVFL-KIGEIDTIKEQYAADILIKCKWREPRLDHN---TEKLEYDWA---NSWTPKLYIENTIGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL +N + L+ D + + W P L+ N E H +++ N+ +++ + R++ ++L +FP DVQ + + S T L+ + E V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS ++F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 69 CNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFAN---EKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWQEQGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 326
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Celegans
Match: deg-3 (Acetylcholine receptor subunit alpha-type deg-3 [Source:UniProtKB/Swiss-Prot;Acc:P54244]) HSP 1 Score: 52.7582 bits (125), Expect = 4.229e-7 Identity = 53/230 (23.04%), Postives = 100/230 (43.48%), Query Frame = 3 Query: 252 QVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANS--------WTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRR-----VSGIFLENLELN--HFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQ 896 +V++ + +I E+D + ++ + KWR+ LD N EY NS W P Y+ N++ +++ + + + + EK I+ LN FP+D Q+ T+TI+S T + D V+ QSF+ +EW + K + + E Y+YA + + R+P Y++ N+ + T +I +++ F S +R + Sbjct: 79 KVHISISLYQIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPN--EYGMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQATSNYWKGEKGAELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISS---WTNSKSALDYYADTEVSMQSFIPNEEWQV-KSFKIHRHE--YKYACCAEPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTPASTDDDRTE 300
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Celegans
Match: deg-3 (Acetylcholine receptor subunit alpha-type deg-3 [Source:UniProtKB/Swiss-Prot;Acc:P54244]) HSP 1 Score: 52.7582 bits (125), Expect = 4.229e-7 Identity = 53/230 (23.04%), Postives = 100/230 (43.48%), Query Frame = 3 Query: 252 QVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANS--------WTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRR-----VSGIFLENLELN--HFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQ 896 +V++ + +I E+D + ++ + KWR+ LD N EY NS W P Y+ N++ +++ + + + + EK I+ LN FP+D Q+ T+TI+S T + D V+ QSF+ +EW + K + + E Y+YA + + R+P Y++ N+ + T +I +++ F S +R + Sbjct: 79 KVHISISLYQIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPN--EYGMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQATSNYWKGEKGAELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISS---WTNSKSALDYYADTEVSMQSFIPNEEWQV-KSFKIHRHE--YKYACCAEPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTPASTDDDRTE 300
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Celegans
Match: lgc-8 (Ligand-Gated ion Channel [Source:UniProtKB/TrEMBL;Acc:Q6BEQ0]) HSP 1 Score: 51.2174 bits (121), Expect = 1.060e-6 Identity = 46/198 (23.23%), Postives = 91/198 (45.96%), Query Frame = 3 Query: 534 NLELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHI-----ETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLI---CSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDM 1100 ++ +N FP+D Q I + + E+ + D F EW F+ I ETE ++ + + S V A++VK RRP +++W + + T++I C L T + L + R+ L T +L+ +V +PK S L L ++++ +F++ + ++ +++ + + A E+ P M Sbjct: 153 DMNINEFPYDQQTCMIKMGPWSYTMKEVTCIVGGDIERNETTGKFQGNSEWD-FEGIVSSVGETEDPDVNFTF---SEVHFALTVK----RRPQFYVWVLLIPTYIITVVCIFGLFTPTANHGLREERVNLGITTLLSSAVILQIVANAMPKTSELPLLGNFILAEIFVVAIGVLFAVLVLTLHQRAHTREWRPPAWM 342
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Celegans
Match: lgc-18 (Ligand-Gated ion Channel [Source:UniProtKB/TrEMBL;Acc:Q22084]) HSP 1 Score: 50.8322 bits (120), Expect = 1.339e-6 Identity = 58/267 (21.72%), Postives = 118/267 (44.19%), Query Frame = 3 Query: 261 VCVVFLKIGEIDTIKEQYAADILIKCKWREPR------LDHNTEKLEYDWANSWTPKLYI--ENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYE-----YADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTV 1022 V + +LK+ E+ +E+ + + + W +PR L + + L W+P L + N I + ++ ++M+ H + ++S L+++ FP+D Q T I N+P ++ V + + + ++ W + E E L + Y D + + R R P Y+I+ I +F+I +LS++ + K+ ++L + T ++T+ V+ +PK + L Y+I +LFI+ V Sbjct: 76 VSLYYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYGDIKMLHMRQDKVWSPTLSLFRINDIADFRDPDFRMVCVENTGHTYTTLSVKIS--LNCPLDVSMFPYDSQ--TCRIQFNMPLFFMQQVEMFSQIY----EGILNSTVWEKMGNSEWELANLTHSVELLSYGDGLGDMQLATFEIRIRRNPMYYIYMIIFPSFIINALSIIGVFLKKTDKMSKLNVGLTNIMTMTFILGVMADKIPKTGSIPLLGIYIIVNLFIMIV 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Celegans
Match: lgc-9 (Ligand-Gated ion Channel [Source:UniProtKB/TrEMBL;Acc:O44452]) HSP 1 Score: 50.8322 bits (120), Expect = 1.423e-6 Identity = 60/220 (27.27%), Postives = 100/220 (45.45%), Query Frame = 3 Query: 234 QNNRKRQVYVCVVFLKIGEIDTIKE-QYAADILIKC--KWREPRL-----DHNT-EKLEYDWANSWTPKLYIENTIGEAKEHV----YQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLV 854 ++NR V++ +V +G + ++E Q A +I KWR+P+L DH+ ++ + W PKL+I N++ + K+ + Y + I H + + VS + N++L FPFD Q I +AS L S E VN T F EW + + K + + + + RRP Y+I I + TFLI +LS++ Sbjct: 61 ESNRPVIVHMTIV---LGILTEVRENQQVASFVISHVQKWRDPKLAWNPADHSGLTQVVMPRSLVWVPKLFIYNSM-DTKDMLTDDRYDVRI-QHTGHVKVNSPQFVSTLCRINIDL--FPFDTQFCAIALASPLLSVEEMDVN---ATQPPVDSYFSGNAEWQVMNVTVKQMK-----FMEEGEYRAEVHYILHLNRRPTYYITVIVVPTFLISALSIL 265
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Match: Rdl (gene:FBgn0004244 transcript:FBtr0333836) HSP 1 Score: 51.6026 bits (122), Expect = 1.317e-6 Identity = 66/287 (23.00%), Postives = 121/287 (42.16%), Query Frame = 3 Query: 192 DNYSVNNDERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDH----NTEKLEYDW---ANSWTPKLYIENTIGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFIL 1016 D++SV+ D+R+ + +V V + L I + +K + D + W +PRL + E L N W P + N E + + + NE + + R++ + L +FP D Q I I S +IR D V S V+ ++ + H ++ A E + ++ + + R Y++ I++ + LI +S V+F ++++ R+ L T VLT+ N LPKISY+ +D Y + + F++ Sbjct: 64 DSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVN---EKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWR-DGLSSVGMSSEVELPQFRVLGH-----RQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVY-LGTCFVM 340
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Match: Rdl (gene:FBgn0004244 transcript:FBtr0309054) HSP 1 Score: 51.2174 bits (121), Expect = 1.357e-6 Identity = 66/287 (23.00%), Postives = 121/287 (42.16%), Query Frame = 3 Query: 192 DNYSVNNDERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDH----NTEKLEYDW---ANSWTPKLYIENTIGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFIL 1016 D++SV+ D+R+ + +V V + L I + +K + D + W +PRL + E L N W P + N E + + + NE + + R++ + L +FP D Q I I S +IR D V S V+ ++ + H ++ A E + ++ + + R Y++ I++ + LI +S V+F ++++ R+ L T VLT+ N LPKISY+ +D Y + + F++ Sbjct: 64 DSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVN---EKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYFWR-DGLSSVGMSSEVELPQFRVLGH-----RQRATEINLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVY-LGTCFVM 340
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Match: Rdl (gene:FBgn0004244 transcript:FBtr0333835) HSP 1 Score: 51.2174 bits (121), Expect = 1.552e-6 Identity = 65/287 (22.65%), Postives = 123/287 (42.86%), Query Frame = 3 Query: 192 DNYSVNNDERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDH----NTEKLEYDW---ANSWTPKLYIENTIGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFIL 1016 D++SV+ D+R+ + +V V + L I + +K + D + W +PRL + E L N W P + N E + + + NE + + R++ + L +FP D Q I I S +IR + + + V S V ++ + H ++ A E + + ++ + + R Y++ I++ + LI +S V+F ++++ R+ L T VLT+ N LPKISY+ +D Y + + F++ Sbjct: 64 DSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVN---EKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSSEVSLPQFKVLGH-----RQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVY-LGTCFVM 340
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Match: Rdl (gene:FBgn0004244 transcript:FBtr0076534) HSP 1 Score: 51.2174 bits (121), Expect = 1.552e-6 Identity = 65/287 (22.65%), Postives = 123/287 (42.86%), Query Frame = 3 Query: 192 DNYSVNNDERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDH----NTEKLEYDW---ANSWTPKLYIENTIGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFIL 1016 D++SV+ D+R+ + +V V + L I + +K + D + W +PRL + E L N W P + N E + + + NE + + R++ + L +FP D Q I I S +IR + + + V S V ++ + H ++ A E + + ++ + + R Y++ I++ + LI +S V+F ++++ R+ L T VLT+ N LPKISY+ +D Y + + F++ Sbjct: 64 DSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAYRKRPGVETLSVGSEFIKNIWVPDTFFVN---EKQSYFHIATTSNEFIRVHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWN-EGPNSVGVSSEVSLPQFKVLGH-----RQRAMEISLTTGNYSRLACEIQFVRSMGYYLIQIYIPSGLIVIISWVSFWLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVY-LGTCFVM 340
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Match: ort (gene:FBgn0003011 transcript:FBtr0083784) HSP 1 Score: 49.2914 bits (116), Expect = 6.043e-6 Identity = 75/302 (24.83%), Postives = 131/302 (43.38%), Query Frame = 3 Query: 255 VYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRL---DHNTEK---LEYDW-ANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNH------FPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAY-EYADPSSVKPAISVKC-----RAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVICVWHGMIVVIERFASKSEYDLPKDM 1100 VY V + + ID Y AD+ W++ RL ++ T++ LE DW N W P + +N AK +Q + N + +L + + + + L+L+ +P D Q+ + + S L T L+ D T + VDE +IE Q L E AD + V + C RR Y+++N ++ T +I +S V+F + R+ L T +LTL LP +SYL +D ++ + ++F+ + + + +V+ S+ +PK M Sbjct: 55 VYFHVTVMGLDSIDENSMTYVADVFFAQTWKDHRLRLPENMTQEYRLLEVDWLKNMWRPDSFFKN----AKSVTFQTMTI-PNHYMWLYKDKTILYMVKLTLKLSCIMNFAIYPHDTQECKLQMES-LSHTTDDLIFQWDPTTPL----VVDE-------NIELPQVALIRNETADCTQVYSTGNFTCLEVVFTLKRRLVYYVFNTYIPTCMIVIMSWVSFWIKPEAAPARVTLGVTSLLTLSTQHAKSQSSLPPVSYLKAVDAFMSVCTVFVFMALMEYCLINIVL------SDTPIPKPM 333
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]) HSP 1 Score: 51.9878 bits (123), Expect = 9.163e-7 Identity = 66/278 (23.74%), Postives = 111/278 (39.93%), Query Frame = 3 Query: 213 DERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLEN------LELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSF--VDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILT 1019 D ++ D R + V IG +D I +Y DI W + RL N+ ++ K++I +T I N+ L RV L+L++FP D + +S P EI+ +R ++S D++ W L++ + + S +++ +RR YF ++ +I LS V+F ++K R L T VLT+ + + LPK+SY+T +D +V S FI T Sbjct: 72 DNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIQ--------YRWQRRSVEVADQRYWRLYQFAFVGLRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFV-SVCFIFT 340
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]) HSP 1 Score: 51.9878 bits (123), Expect = 1.000e-6 Identity = 66/278 (23.74%), Postives = 111/278 (39.93%), Query Frame = 3 Query: 213 DERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLEN------LELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSF--VDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILT 1019 D ++ D R + V IG +D I +Y DI W + RL N+ ++ K++I +T I N+ L RV L+L++FP D + +S P EI+ +R ++S D++ W L++ + + S +++ +RR YF ++ +I LS V+F ++K R L T VLT+ + + LPK+SY+T +D +V S FI T Sbjct: 72 DNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIQ--------YRWQRRSVEVADQRYWRLYQFAFVGLRNSSDVANTQSGEYVVMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFV-SVCFIFT 340
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: glra1 (glycine receptor, alpha 1 [Source:NCBI gene;Acc:30676]) HSP 1 Score: 51.6026 bits (122), Expect = 1.205e-6 Identity = 62/267 (23.22%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVY---QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V +++ ++N + R++ + ++L +FP DVQ + + S T L+ + DE V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 64 TCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY--SIRITLVLACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWDEKGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 322
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: glra1 (glycine receptor, alpha 1 [Source:NCBI gene;Acc:30676]) HSP 1 Score: 51.6026 bits (122), Expect = 1.332e-6 Identity = 62/267 (23.22%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVY---QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V +++ ++N + R++ + ++L +FP DVQ + + S T L+ + DE V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 77 TCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY--SIRITLVLACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWDEKGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 335
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Match: glra1 (glycine receptor, alpha 1 [Source:NCBI gene;Acc:30676]) HSP 1 Score: 51.6026 bits (122), Expect = 1.347e-6 Identity = 62/267 (23.22%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVY---QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V +++ ++N + R++ + ++L +FP DVQ + + S T L+ + DE V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 79 TCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY--SIRITLVLACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWDEKGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 337
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 52.7582 bits (125), Expect = 6.236e-7 Identity = 58/257 (22.57%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 261 VCVVF-LKIGEIDTIKE---QYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENT--IGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS 1001 VCV + I ID + E Y + + WR+ RL ++ L N +L++ +T + + K V+ + + N + + R++ ++L +P D Q+ T+ I S +T+ D + R ++ + L + E + ++ + P +S+ R R YFI ++ + LI LS V+F ++ R+ L T VLT+ + + LPKI Y+ +D Y++ Sbjct: 61 VCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD-----DIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 312
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 52.373 bits (124), Expect = 9.442e-7 Identity = 58/257 (22.57%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 261 VCVVF-LKIGEIDTIKE---QYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENT--IGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS 1001 VCV + I ID + E Y + + WR+ RL ++ L N +L++ +T + + K V+ + + N + + R++ ++L +P D Q+ T+ I S +T+ D + R ++ + L + E + ++ + P +S+ R R YFI ++ + LI LS V+F ++ R+ L T VLT+ + + LPKI Y+ +D Y++ Sbjct: 83 VCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD-----DIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Gabrb3 (gamma-aminobutyric acid (GABA) A receptor, subunit beta 3 [Source:MGI Symbol;Acc:MGI:95621]) HSP 1 Score: 51.9878 bits (123), Expect = 1.073e-6 Identity = 58/257 (22.57%), Postives = 110/257 (42.80%), Query Frame = 3 Query: 261 VCVVF-LKIGEIDTIKE---QYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENT--IGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS 1001 VCV + I ID + E Y + + WR+ RL ++ L N +L++ +T + + K V+ + + N + + R++ ++L +P D Q+ T+ I S +T+ D + R ++ + L + E + ++ + P +S+ R R YFI ++ + LI LS V+F ++ R+ L T VLT+ + + LPKI Y+ +D Y++ Sbjct: 61 VCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD-----DIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 312
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Glra1 (glycine receptor, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:95747]) HSP 1 Score: 51.6026 bits (122), Expect = 1.496e-6 Identity = 61/267 (22.85%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 264 CVVFL-KIGEIDTIKEQYAADILIKCKWREPRLDHN---TEKLEYDWA---NSWTPKLYIENTIGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL +N + L+ D + + W P L+ N E H +++ N+ +++ + R++ ++L +FP DVQ + + S T L+ + E V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS ++F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 69 CNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFAN---EKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWQEQGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 326
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Match: Glra1 (glycine receptor, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:95747]) HSP 1 Score: 51.6026 bits (122), Expect = 1.555e-6 Identity = 61/267 (22.85%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 264 CVVFL-KIGEIDTIKEQYAADILIKCKWREPRLDHN---TEKLEYDWA---NSWTPKLYIENTIGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL +N + L+ D + + W P L+ N E H +++ N+ +++ + R++ ++L +FP DVQ + + S T L+ + E V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS ++F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 69 CNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYNEYPDDSLDLDPSMLDSIWKPDLFFAN---EKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWQEQGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 326
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P0C7B7|ELIC_DICCH (Cys-loop ligand-gated ion channel OS=Dickeya chrysanthemi OX=556 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.387e-11 Identity = 75/293 (25.60%), Postives = 139/293 (47.44%), Query Frame = 3 Query: 243 RKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWR-EPRLDHNTEKLEYD------WANS--WTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPA------ISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS---SLF--ILTVICVWHGMIVVIE 1058 R V V + KI ++T+++ Y D I +W +PR + L + W N+ W P L N +G ++++F + + + R G F +++ FPFD Q + + + + ++R + T ++ + EW++ + T ++ Y++ SSV+P I+V+ A R P+Y++W+ L LI + S F ++ RLQ +FTL+LT+VA+ F + LP++ Y T +D+ +I+ S+F IL +I H + +E Sbjct: 10 RPVDVSVSIFINKIYGVNTLEQTYKVDGYIVAQWTGKPRKTPGDKPLIVENTQIERWINNGLWVPALEFINVVGSPDTGNKRLMLFPDGR---VIYNARFLGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQLRFSDIQVYTENIDNEEI---DEWWI-RKASTHISDIRYDHL--SSVQPNQNEFSRITVRIDAVRNPSYYLWSFILPLGLIIAASWSVFWLESF--SERLQTSFTLMLTVVAYAFYTSNILPRLPYTTVIDQMIIAGYGSIFAAILLIIFAHHRQAMGVE 291
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|P54244|ACH3_CAEEL (Acetylcholine receptor subunit alpha-type deg-3 OS=Caenorhabditis elegans OX=6239 GN=deg-3 PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 5.379e-6 Identity = 53/230 (23.04%), Postives = 100/230 (43.48%), Query Frame = 3 Query: 252 QVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANS--------WTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRR-----VSGIFLENLELN--HFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQ 896 +V++ + +I E+D + ++ + KWR+ LD N EY NS W P Y+ N++ +++ + + + + EK I+ LN FP+D Q+ T+TI+S T + D V+ QSF+ +EW + K + + E Y+YA + + R+P Y++ N+ + T +I +++ F S +R + Sbjct: 79 KVHISISLYQIIEVDEPSQNIKLNVWMIQKWRDEYLDWNPN--EYGMINSTIIPFHHLWIPDTYLYNSVKMSRDETERYMNIQATSNYWKGEKGAELSFLYPAIYTITCRLNIRFFPYDRQNCTLTISS---WTNSKSALDYYADTEVSMQSFIPNEEWQV-KSFKIHRHE--YKYACCAEPWVILQASLVIQRKPLYYLVNLIIPTSIITLVAITGFFTPASTDDDRTE 300
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Match: sp|O93430|GLRA1_DANRE (Glycine receptor subunit alphaZ1 OS=Danio rerio OX=7955 GN=glra1 PE=1 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 9.100e-6 Identity = 62/267 (23.22%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVY---QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V +++ ++N + R++ + ++L +FP DVQ + + S T L+ + DE V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 64 TCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY--SIRITLVLACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWDEKGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 322
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A0V0J6K7 (Neur_chan_LBD domain-containing protein OS=Schistocephalus solidus OX=70667 GN=TR135000 PE=3 SV=1) HSP 1 Score: 504.212 bits (1297), Expect = 9.885e-171 Identity = 251/342 (73.39%), Postives = 296/342 (86.55%), Query Frame = 3 Query: 243 RKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYLERLQCQLKYKGART 1268 +KRQVY+CV+FLKIGEIDTIKEQYAAD+LIK KWR+ +D K EYDW ++WTPKLYIENTIGE +E ++Q I NE HAFL EKRRVSG+FLENLELNHFPFDVQDLTIT+ASNLPS+EIRL+NDPDE HR+NKQSFVDEQEWYL+KHI++EQ ELA EY + +SV+PA+SVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVD+S PQ+RLQLTFTLVLTLVAFKFVVNQCLPKISYLTYLDKY+ISSLF LT+IC+WHG I VIE+ A + + L DME+YVI+ + + + +N GF++MIY VACKRRR MK +D EYLE+++CQ+ KG+R Sbjct: 288 KKRQVYLCVIFLKIGEIDTIKEQYAADVLIKAKWRDADMDTAGSK-EYDWLHNWTPKLYIENTIGEIREQIHQTIALNEFGHAFLVEKRRVSGVFLENLELNHFPFDVQDLTITVASNLPSSEIRLLNDPDEPHRINKQSFVDEQEWYLYKHIDSEQHELANEYIENASVRPALSVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDRSQPQSRLQLTFTLVLTLVAFKFVVNQCLPKISYLTYLDKYIISSLFFLTLICIWHGGIAVIEKVAQRFDILLWADMELYVILLIGIGYFTFNVGFMLMIYCVACKRRRDMKSKDSEYLEKVKCQMNKKGSRA 628
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A1S3HM70 (uncharacterized protein LOC106156405 isoform X5 OS=Lingula unguis OX=7574 GN=LOC106156405 PE=3 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 2.815e-117 Identity = 185/343 (53.94%), Postives = 252/343 (73.47%), Query Frame = 3 Query: 228 GDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDH---NTEKL----EYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYLERL 1235 + ++ + V VCV+FLK+GEIDT+KEQ++AD+L+K KWREP LD N ++L E D+ W PKL++ENT+G+ KE ++ + F+ AF+CE +R+ G F+ENLELN FPFDVQDLT+T+ S P++E+ L+ D E HRV KQSF+DEQEW L+KH+E+E K LA + DPS + +SVKCRAARRP +F+WNIFLVTFL CSLS TF+V+ +LPQNRLQL+FTLVLT VAFKFV+NQ LP++SYLTYLDKY++ S+ L ++C WH ++ I+ S++D K E+ + +AV + G+N G IYA ACKRRRIMKQ+D+EY+E + Sbjct: 46 AEPDHDRVTVEVCVIFLKLGEIDTLKEQFSADVLVKAKWREPELDRKGKNKDELIDEDEIDFEKYWNPKLFVENTVGDPKEVRWRTLAFSSEGDAFICENQRLKGTFVENLELNDFPFDVQDLTVTVTSERPASELNLIEDRMELHRVYKQSFIDEQEWSLYKHLESESKFLAEPHGDPSVKRVLLSVKCRAARRPWFFVWNIFLVTFLFCSLSFATFSVEYNLPQNRLQLSFTLVLTAVAFKFVINQSLPRVSYLTYLDKYLLGSMCQLAIVCAWHSIVAKID-----SKHD-AKVAELVFLTALAVIYIGFNAGICFHIYAFACKRRRIMKQKDREYMESV 382
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A1S3HLY8 (uncharacterized protein LOC106156405 isoform X4 OS=Lingula unguis OX=7574 GN=LOC106156405 PE=3 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 3.674e-116 Identity = 185/334 (55.39%), Postives = 247/334 (73.95%), Query Frame = 3 Query: 246 KRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDH---NTEKL----EYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYL 1226 K V VCV+FLK+GEIDT+KEQ++AD+L+K KWREP LD N ++L E D+ W PKL++ENT+G+ KE ++ + F+ AF+CE +R+ G F+ENLELN FPFDVQDLT+T+ S P++E+ L+ D E HRV KQSF+DEQEW L+KH+E+E K LA + DPS + +SVKCRAARRP +F+WNIFLVTFL CSLS TF+V+ +LPQNRLQL+FTLVLT VAFKFV+NQ LP++SYLTYLDKY++ S+ L ++C WH ++ I+ S++D K E+ + +AV + G+N G IYA ACKRRRIMKQ+D+EY+ Sbjct: 3 KVTVEVCVIFLKLGEIDTLKEQFSADVLVKAKWREPELDRKGKNKDELIDEDEIDFEKYWNPKLFVENTVGDPKEVRWRTLAFSSEGDAFICENQRLKGTFVENLELNDFPFDVQDLTVTVTSERPASELNLIEDRMELHRVYKQSFIDEQEWSLYKHLESESKFLAEPHGDPSVKRVLLSVKCRAARRPWFFVWNIFLVTFLFCSLSFATFSVEYNLPQNRLQLSFTLVLTAVAFKFVINQSLPRVSYLTYLDKYLLGSMCQLAIVCAWHSIVAKID-----SKHDA-KVAELVFLTALAVIYIGFNAGICFHIYAFACKRRRIMKQKDREYM 330
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A1S3HPY9 (uncharacterized protein LOC106156405 isoform X3 OS=Lingula unguis OX=7574 GN=LOC106156405 PE=3 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 1.097e-115 Identity = 185/334 (55.39%), Postives = 247/334 (73.95%), Query Frame = 3 Query: 246 KRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDH---NTEKL----EYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYL 1226 K V VCV+FLK+GEIDT+KEQ++AD+L+K KWREP LD N ++L E D+ W PKL++ENT+G+ KE ++ + F+ AF+CE +R+ G F+ENLELN FPFDVQDLT+T+ S P++E+ L+ D E HRV KQSF+DEQEW L+KH+E+E K LA + DPS + +SVKCRAARRP +F+WNIFLVTFL CSLS TF+V+ +LPQNRLQL+FTLVLT VAFKFV+NQ LP++SYLTYLDKY++ S+ L ++C WH ++ I+ S++D K E+ + +AV + G+N G IYA ACKRRRIMKQ+D+EY+ Sbjct: 48 KVTVEVCVIFLKLGEIDTLKEQFSADVLVKAKWREPELDRKGKNKDELIDEDEIDFEKYWNPKLFVENTVGDPKEVRWRTLAFSSEGDAFICENQRLKGTFVENLELNDFPFDVQDLTVTVTSERPASELNLIEDRMELHRVYKQSFIDEQEWSLYKHLESESKFLAEPHGDPSVKRVLLSVKCRAARRPWFFVWNIFLVTFLFCSLSFATFSVEYNLPQNRLQLSFTLVLTAVAFKFVINQSLPRVSYLTYLDKYLLGSMCQLAIVCAWHSIVAKID-----SKHDA-KVAELVFLTALAVIYIGFNAGICFHIYAFACKRRRIMKQKDREYM 375
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Match: A0A1S3HM64 (uncharacterized protein LOC106156405 isoform X1 OS=Lingula unguis OX=7574 GN=LOC106156405 PE=3 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 1.324e-115 Identity = 184/340 (54.12%), Postives = 250/340 (73.53%), Query Frame = 3 Query: 228 GDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDH---NTEKL----EYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYL 1226 + ++ + V VCV+FLK+GEIDT+KEQ++AD+L+K KWREP LD N ++L E D+ W PKL++ENT+G+ KE ++ + F+ AF+CE +R+ G F+ENLELN FPFDVQDLT+T+ S P++E+ L+ D E HRV KQSF+DEQEW L+KH+E+E K LA + DPS + +SVKCRAARRP +F+WNIFLVTFL CSLS TF+V+ +LPQNRLQL+FTLVLT VAFKFV+NQ LP++SYLTYLDKY++ S+ L ++C WH ++ I+ S++D K E+ + +AV + G+N G IYA ACKRRRIMKQ+D+EY+ Sbjct: 46 AEPDHDRVTVEVCVIFLKLGEIDTLKEQFSADVLVKAKWREPELDRKGKNKDELIDEDEIDFEKYWNPKLFVENTVGDPKEVRWRTLAFSSEGDAFICENQRLKGTFVENLELNDFPFDVQDLTVTVTSERPASELNLIEDRMELHRVYKQSFIDEQEWSLYKHLESESKFLAEPHGDPSVKRVLLSVKCRAARRPWFFVWNIFLVTFLFCSLSFATFSVEYNLPQNRLQLSFTLVLTAVAFKFVINQSLPRVSYLTYLDKYLLGSMCQLAIVCAWHSIVAKID-----SKHDA-KVAELVFLTALAVIYIGFNAGICFHIYAFACKRRRIMKQKDREYM 379
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: glra2 (glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]) HSP 1 Score: 55.4546 bits (132), Expect = 6.069e-8 Identity = 64/271 (23.62%), Postives = 118/271 (43.54%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHV-YQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVICVWHGM 1043 C +F+ G + Y +I ++ KW +PRL ++ L+ D + + W P L+ N G V + ++ + R++ I ++L +FP DVQ T+ + S + + DE + L + I E+KEL Y ++ K I VK + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + G+ Sbjct: 62 TCNIFINSFGSVTETTMDYRVNIFLRQKWNDPRLAYSEYPDPSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKDGTVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLDEGPVQVAEGLT------LPQFIMREEKELGYCTKHYNTGKFTCIEVKFKLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGV 326
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: glra1 (glycine receptor alpha 1 [Source:NCBI gene;Acc:103026517]) HSP 1 Score: 51.9878 bits (123), Expect = 9.267e-7 Identity = 62/267 (23.22%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVY---QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V +++ ++N + R++ + ++L +FP DVQ + + S T L+ + DE V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 80 TCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY--SIRITLVLACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWDEKGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 338
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: glra1 (glycine receptor alpha 1 [Source:NCBI gene;Acc:103026517]) HSP 1 Score: 51.6026 bits (122), Expect = 1.018e-6 Identity = 62/267 (23.22%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVY---QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V +++ ++N + R++ + ++L +FP DVQ + + S T L+ + DE V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 67 TCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY--SIRITLVLACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWDEKGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 325
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:NCBI gene;Acc:103030074]) HSP 1 Score: 50.447 bits (119), Expect = 2.447e-6 Identity = 66/276 (23.91%), Postives = 107/276 (38.77%), Query Frame = 3 Query: 213 DERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLEN------LELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILT 1019 D ++ D + + V IG +D I +Y DI W + RL N+ ++ K++I +T I N+ L RV L+L++FP D + +S P EI + H Q D++ W L++ + S +S+ +RR YF ++ +I LS V+F ++K R L T VLT+ + + LPK+SY+T +D +V S FI T Sbjct: 66 DNKLRPDIGVKPTLIDAAVYVNSIGPVDPINMEYTIDIFFAQSWYDSRLQFNSSMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPKNEIEY-----KWHSRAVQ-VADQRYWRLYQFAFVGLQNTTGIAHTQSGDYVVMSILFTLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYVTAMDLFV-SVCFIFT 334
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Match: GABRB2 (gamma-aminobutyric acid receptor subunit beta-2 [Source:NCBI gene;Acc:103038806]) HSP 1 Score: 49.2914 bits (116), Expect = 6.966e-6 Identity = 54/251 (21.51%), Postives = 106/251 (42.23%), Query Frame = 3 Query: 276 LKIGEIDTIKE---QYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENT--IGEAKEHVYQMIIFNE----NQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS 1001 + I ID + E Y + + WR+ RL ++ L N +L++ +T + + K V+ + + N + + R++ ++L +P D Q+ T+ I S +T+ D + R + + L + + K ++ + P +S+ + R YFI ++ + LI LS V+F ++ R+ L T VLT+ + + LPKI Y+ +D Y++ Sbjct: 68 IDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD-----DIEFYWRGGNHAVTGVERIELPQFSIVDYKLISKNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMG 313
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Sea Lamprey
Match: glra4a (glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]) HSP 1 Score: 52.7582 bits (125), Expect = 8.895e-8 Identity = 66/294 (22.45%), Postives = 129/294 (43.88%), Query Frame = 3 Query: 264 CVVFLK-IGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEY-----DWANS-----WTPKLYIENTIGEAKEHVYQMI-------IFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVIS-SLFILTVICVWHGMIVVIERFA-SKSEYD 1085 C + +K G ++ Y+ +I ++ W +PR+ + + +EY D NS W P L+ EN A + +YQ++ F FLC R+S + + L +P D Q +I + S +T L+ ++T V+ + V ++ L + Y Y S VK + R Y++ +++ + L+ +S ++F ++ R+ L T +LT+ N LPK+SY+ +D ++ + +F+ + + + + + R S S +D Sbjct: 73 CSILVKGFGPVEEATMDYSINIFLRQTWNDPRILNVLKSIEYNTDFLDLGNSFVDSVWKPDLFFENEKSAAFQ-MYQLVTGFKYMYTFAMWITCFLC--FRLSLVLACPMSLEVYPMDAQYCSIYLESYGYTTN-DLIFQWNDTEPVSFGAGVSTPKFTLSNETFLGECTKEYTYGTFSCVKATFFLD----RDMGYYLIQVYIPSCLLVIISWLSFWLNVEAAPARVGLGITTILTVTTQMTSANAALPKVSYIKAIDVWMGACQVFVFSALLEFAAVNMATRRHGISPSHHD 358
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Sea Lamprey
Match: glra2 (glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]) HSP 1 Score: 46.2098 bits (108), Expect = 9.257e-6 Identity = 64/268 (23.88%), Postives = 116/268 (43.28%), Query Frame = 3 Query: 264 CVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVYQ----MIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWY-LFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V + IF + + R++ ++L +FP DVQ T A L S + D ++ V E L + + ++K+L Y ++ K I VK R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + Sbjct: 10 CNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLY---SIRLTLTLSCPMDLKNFPMDVQ----TCAMQLESFGYTM---NDLIFEWKQEGAVQVAEGLTLPQFVLKDEKDLVYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAAL 267
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO32790 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SU26]) HSP 1 Score: 127.487 bits (319), Expect = 1.114e-32 Identity = 84/284 (29.58%), Postives = 148/284 (52.11%), Query Frame = 3 Query: 282 IGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLC-EKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYD---LPKDMEIYVII 1118 +G+ID I++Q+ ++ + WREP+L + E W N W+PK+ N++ + + + + + EN L E ++ G F E L FP D+Q+L+I I+S+ + D + + +Q+F ++W L+ H+ T+ E P+ P + RR ++ WN +V ++ +LS +FA+ +RL +T L+L VA+KFV + LP+ SYLT+LDKY + +L ++ I V + + V +E S+ YD L + +YVI+ Sbjct: 27 LGDIDVIRQQFTCELWMTASWREPKLAGKKNE-EVKWDNEWSPKISFSNSLLLDRVYKGRRLYYEENSTVPLAQEVYKIRGTFKEQFSLEQFPVDLQELSIIISSDWSDRTVTFEKDMAKPDYLRQQTFSSPRDWVLYPHVHTDTATQEGEGLGPNDRSYPVYIITAHVRRRAVHYFWNTAVVMSVLTALSFASFAIPPQQTADRLTVTLLLLLISVAYKFVTSLHLPRTSYLTFLDKYQLGNLLFISFIAVLNTIAVAVE---SRDTYDMVCLYAGLALYVIL 306
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO26859 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TAV8]) HSP 1 Score: 66.6254 bits (161), Expect = 5.877e-13 Identity = 50/161 (31.06%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 648 VNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYD---LPKDMEIYVII 1118 + +Q+F ++W L+ H+ T+ E P+ P + RR ++ WN +V ++ +LS +FA+ +RL +T L+L VA+KFV + LP+ SYLT+LDKY + +L ++ I V + + V +E S+ YD L + +YVI+ Sbjct: 7 LRQQTFSSPRDWVLYPHVHTDTATQEGEGLGPNDRSYPVYIITAHVRRRAVHYFWNTAVVMSVLTALSFASFAIPPQQTADRLTVTLLLLLISVAYKFVTSLHLPRTSYLTFLDKYQLGNLLFISFIAVLNTIAVAVE---SRDTYDMVCLYAGLALYVIL 164
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO37555 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFG6]) HSP 1 Score: 65.0846 bits (157), Expect = 1.990e-11 Identity = 77/288 (26.74%), Postives = 120/288 (41.67%), Query Frame = 3 Query: 192 DNYSVNNDERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDH---NTEKLEYDWANS-WTPKLYIENTIGEAKEHVYQMI--IFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIAS---NLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISS-LFILTVI 1025 DN D R+ D V V L I I+ I Y D ++ WR+PRL H +T L + W P Y N+ +K H I + + + + RV+ + L FP DVQ+ I I S + + + + N D VNK+ + + Y I + Y + S ++ R RR YFI +I+ LI LS ++F + R+ L T VLT+ ++N +PK+SY+ +D Y+I LF+ V+ Sbjct: 11 DNLIQGYDPRLRPDFGGDPVTVTVGFWVLSIDAINVIDMDYRMDFFLRQLWRDPRLKHRFDDTLALSNTMLDKIWVPDTYFVNS-KMSKFHSVTTINKMLSISPDGLVHYNSRVTVKASCAMNLRMFPKDVQNCNIDIESYGYSADNVQYQWENRSDNGIAVNKK--IRDMPQYNLSDINVSRHFTMYVAGNWS----GLTATFRFRRRSGYFIIHIYAPCALIVILSWISFCIPPESTAARIALGITSVLTITTILNMLNNSMPKVSYVKAVDWYLIGCFLFVFAVL 291
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO41538 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S448]) HSP 1 Score: 59.6918 bits (143), Expect = 9.529e-10 Identity = 66/250 (26.40%), Postives = 108/250 (43.20%), Query Frame = 3 Query: 300 IKEQYAADILIKCKWREPRLDHNTEKLEYDWANS----WTPKLYIENTIGEAKEHVYQMIIFNENQH------AFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKY-VISSLFIL 1016 + + Y+ DI + WR+ RL H+ K+ AN WTP Y N HV + EN + R++ ++L FP D QD + I S + E + N +R + E F E + + ++ + ++ V R RR +YFI ++ + I LS + F ++K+ R+ LT T +L+ + +N LP+ISYL +D Y +IS +FIL Sbjct: 1 MHQDYSLDIFFRQWWRDERLAHDVNKVFNMAANPGQYFWTPDTYFVNVKSSKFHHVTR-----ENMRTKIWPDGLIYYSSRITLTASCEMDLRFFPMDTQDCVLKIESYAYTVEDVIYN---WNNRGTTPIEIFAGEMAQFDMTEMTMQTMI-TFSLLTGSFDSLRVSFRFKRRTSYFIVQHYVPSAFIVFLSWLGFWINKNAVPARISLTVTCILSTMVLFESINSSLPRISYLKAVDYYLIISFMFIL 241
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Match: EDO43149 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZH4]) HSP 1 Score: 55.0694 bits (131), Expect = 1.539e-8 Identity = 62/256 (24.22%), Postives = 110/256 (42.97%), Query Frame = 3 Query: 276 LKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANS----WTPKLYIENTIGEAKEHVY----QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVD----EQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSL 1007 + IGEI + Y+ DI + W +PR HN K A++ WTP Y N + AK H ++ N + + + ++ +++L +P D+Q + I S + +D D T + V+ E + F T K +S++ + K RR AYFI ++ ++ LS TF + ++ R+ L+ T +LT + N +PK+SY +D ++++SL Sbjct: 13 VSIGEIKEAEMVYSMDIFFRQWWYDPRFAHNFSKPFTMAADATQLFWTPDTYFWN-VKNAKYHRVTRENMRVMINPDGKIYFSTRITITA--QCDMDLRLYPMDIQYCPLIIESYAHTR-----SDVDYTWKGGDDQGVEIVSKEMAQFEFIGANTYTKAQTNSKGSFASLRAEFTFK----RRVAYFITATYMPAMILVILSWCTFWIHRNAVPARVTLSITTILTTILLTSSTNGSMPKVSYSKAIDYFLMTSL 256
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: glra2 (glycine receptor alpha 2 [Source:NCBI gene;Acc:101169154]) HSP 1 Score: 56.6102 bits (135), Expect = 2.464e-8 Identity = 70/274 (25.55%), Postives = 120/274 (43.80%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRLDHNT---EKLEYDWA---NSWTPKLYIENTIGEAKEHVYQ----MIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVICVWHGM 1043 C +F+ G I Y +I ++ KW +PRL ++ L+ D + + W P L+ N G V + IF + + R++ I ++L +FP DVQ T+ + S T LV + E V + L + I E+KEL Y ++ K I VK R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + G+ Sbjct: 75 TCNIFINSFGSIAETTMDYRVNIFLRQKWNDPRLAYSKYPDSSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLY---SIRLTLILSCPMDLKNFPMDVQTCTMQLES-FGYTMNDLVFEWLEYGAVQV-----SEGLTLPQFIMKEEKELGYCTKHYNTGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAGV 339
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: glra1 (glycine receptor alpha 1 [Source:NCBI gene;Acc:101173557]) HSP 1 Score: 51.9878 bits (123), Expect = 7.508e-7 Identity = 63/267 (23.60%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVY---QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V +++ ++N + R++ I ++L +FP DVQ + + S T L+ + DE V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 85 TCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY--SIRITLILACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWDEKGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 343
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: glra1 (glycine receptor alpha 1 [Source:NCBI gene;Acc:101173557]) HSP 1 Score: 51.9878 bits (123), Expect = 7.562e-7 Identity = 63/267 (23.60%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVY---QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V +++ ++N + R++ I ++L +FP DVQ + + S T L+ + DE V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 57 TCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY--SIRITLILACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWDEKGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 315
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: glra1 (glycine receptor alpha 1 [Source:NCBI gene;Acc:101173557]) HSP 1 Score: 51.9878 bits (123), Expect = 9.053e-7 Identity = 63/267 (23.60%), Postives = 120/267 (44.94%), Query Frame = 3 Query: 261 VCVVFL-KIGEIDTIKEQYAADILIKCKWREPRL---DHNTEKLEYDWA---NSWTPKLYIENTIGEAKEHVY---QMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVK-PAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYV-ISSLFILTVI 1025 C +F+ G I Y +I ++ +W +PRL ++ + L+ D + + W P L+ N G V +++ ++N + R++ I ++L +FP DVQ + + S T L+ + DE V + L + I E+K+L Y ++ K I + R+ Y++ +++ + LI LS V+F ++ R+ L T VLT+ LPK+SY+ +D ++ + LF+ + + Sbjct: 70 TCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRISKNGNVLY--SIRITLILACPMDLKNFPMDVQTCIMQLES-FGYTMNDLIFEWDEKGAVQVADGLT-----LPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL 328
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Match: gabrg1 (gamma-aminobutyric acid type A receptor gamma1 subunit [Source:NCBI gene;Acc:101155813]) HSP 1 Score: 51.2174 bits (121), Expect = 1.428e-6 Identity = 65/278 (23.38%), Postives = 110/278 (39.57%), Query Frame = 3 Query: 213 DERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLEN------LELNHFPFDVQDLTITIAS-NLPSTEIRLVNDPDETHRVNKQSF--VDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILT 1019 D ++ D R + V IG +D I +Y DI W + RL N+ ++ K++I +T I N+ L RV L+L++FP D + +S P EI +R +++ D++ W L++ + + S +++ +RR YF ++ +I LS V+F ++K R L T VLT+ + + LPK+SY+T +D +V S FI T Sbjct: 65 DNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLKFNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTINAECYLKLHNFPMDEHSCPLEFSSYGYPRNEI--------MYRWQRRAVEVADQRYWRLYQFAFVGMRNTSDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTISRKSLPKVSYITAMDLFV-SVCFIFT 333
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000021796.1 (SMESG000021796.1) HSP 1 Score: 852.047 bits (2200), Expect = 0.000e+0 Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 3 Query: 60 MFSSPLININGLTQNSSPPETVFSPSDDAAMPLIDVRNRYKHESDNYSVNNDERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYLERLQCQLKYKGARTIKMIQQTHQMHEVKENRRGTFL 1334 MFSSPLININGLTQNSSPPETVFSPSDDAAMPLIDVRNRYKHESDNYSVNNDERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQLTFTLVLTLVAFKFVVNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYLERLQCQLKYKGARTIKMIQQTHQMHEVKENRRGTFL Sbjct: 1 MFSSPLININGLTQNSSPPETVFSPSDDAAMPLIDVRNRYKHESDNYSVNNDERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQLTFTLVLTLVAFKFVVNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYLERLQCQLKYKGARTIKMIQQTHQMHEVKENRRGTFL 425
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000066647.1 (SMESG000066647.1) HSP 1 Score: 617.846 bits (1592), Expect = 0.000e+0 Identity = 309/404 (76.49%), Postives = 351/404 (86.88%), Query Frame = 3 Query: 141 DAAMPLID-VRNR-----YKHESDNYSVNNDERIFGDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYLERLQCQLKYKGARTIKMIQQTHQMHEVKENRRGTFL 1334 +AA P++ +R R K S NY + N ++N K QVYVCVVFLKIGEIDTIKEQYAAD+LIK KWREP LD+ TE L+YDWANSW+PKLYIENTIGEAKEHVY MI FNE HAFLCEKRRVSG+FLENLELNHFPFDVQDLTIT+ASNLP++EIRLVNDPDETHR+NKQSFVDEQEWYL+KHIETEQ+ELAYEY D ++V+PA+SVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDK LPQNRLQLT+TLVLTLVAFKFVVNQCLPKISYLTYLDKYVISSLFILT+IC+WHG+IVVIE+ + + +Y +P DME+YVII MA+ + GYN FIVMIY VACKRRR M QRDKEY+E++QCQ+KYKG R ++MIQQTHQ+HEVKEN TF+ Sbjct: 189 EAAYPMMSGIRTRRGAVTSKETSSNYRLYN----IVQKDNVKHQVYVCVVFLKIGEIDTIKEQYAADVLIKSKWREPMLDNQTETLKYDWANSWSPKLYIENTIGEAKEHVYHMITFNEFNHAFLCEKRRVSGVFLENLELNHFPFDVQDLTITVASNLPTSEIRLVNDPDETHRINKQSFVDEQEWYLYKHIETEQRELAYEYTDLATVRPALSVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKKLPQNRLQLTYTLVLTLVAFKFVVNQCLPKISYLTYLDKYVISSLFILTLICLWHGLIVVIEKVSDRFKYVIPDDMEVYVIIFMAIGYMGYNIAFIVMIYCVACKRRRDMMQRDKEYVEKVQCQMKYKGMRAMRMIQQTHQLHEVKENGNATFI 588
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000066647.1 (SMESG000066647.1) HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0 Identity = 315/459 (68.63%), Postives = 365/459 (79.52%), Query Frame = 3 Query: 66 SSPL-ININGLTQNSSPPETVFSPSDDAAMPLIDV-----RNRYKHESDNYSVNNDER-------IFGDQNNR-----------------------KRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYLERLQCQLKYKGARTIKMIQQTHQMHEVKENRRGTFL 1334 SSPL + ++ P + F P+D+ +D+ RN +S++ N+++R +F N R K QVYVCVVFLKIGEIDTIKEQYAAD+LIK KWREP LD+ TE L+YDWANSW+PKLYIENTIGEAKEHVY MI FNE HAFLCEKRRVSG+FLENLELNHFPFDVQDLTIT+ASNLP++EIRLVNDPDETHR+NKQSFVDEQEWYL+KHIETEQ+ELAYEY D ++V+PA+SVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDK LPQNRLQLT+TLVLTLVAFKFVVNQCLPKISYLTYLDKYVISSLFILT+IC+WHG+IVVIE+ + + +Y +P DME+YVII MA+ + GYN FIVMIY VACKRRR M QRDKEY+E++QCQ+KYKG R ++MIQQTHQ+HEVKEN TF+ Sbjct: 11 SSPLHLQPESISHQPFLPASGFLPNDEDEDTRLDIEFESIRNASYTKSESTKSNDNDRASIINETLFNHANKRIRMKSFNKFHRLDSKCLNVDTSIKHQVYVCVVFLKIGEIDTIKEQYAADVLIKSKWREPMLDNQTETLKYDWANSWSPKLYIENTIGEAKEHVYHMITFNEFNHAFLCEKRRVSGVFLENLELNHFPFDVQDLTITVASNLPTSEIRLVNDPDETHRINKQSFVDEQEWYLYKHIETEQRELAYEYTDLATVRPALSVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKKLPQNRLQLTYTLVLTLVAFKFVVNQCLPKISYLTYLDKYVISSLFILTLICLWHGLIVVIEKVSDRFKYVIPDDMEVYVIIFMAIGYMGYNIAFIVMIYCVACKRRRDMMQRDKEYVEKVQCQMKYKGMRAMRMIQQTHQLHEVKENGNATFI 469
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000039749.1 (SMESG000039749.1) HSP 1 Score: 534.643 bits (1376), Expect = 0.000e+0 Identity = 256/369 (69.38%), Postives = 314/369 (85.09%), Query Frame = 3 Query: 228 GDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYLERLQCQLKYKGARTIKMIQQTHQMHEVKENRRGTFL 1334 GD +KRQVY+CVVFLKIGEIDTIKEQ+ ADI++K KWREP LD + + L YDW+ WTPKLY+ENT+G+ +EHVYQMI FNE HAFLCEKRRVSG+FLENLELNHFPFDVQDLTI +A+ L S+EIRLVNDPDE HR+NKQSFVDEQEW+L+K+IE+EQK++ +EYADP SV+PA+ V+CRAARRPAYF+WN+FLVTFLICSLSLVTFAVDK LPQNRLQL++TLVLTL+AFKFVVNQCLPKISYLTYLDKY+IS+LF LT++C WHG++VVI R + L +++E+YV+I ++V + YN GF+++IY VA KRRR M++ DKEYLE++QCQ+K KG R +M QQT Q+HEVK N F+ Sbjct: 69 GDDTLKKRQVYICVVFLKIGEIDTIKEQFTADIIVKAKWREPSLDFHIDGLNYDWSKCWTPKLYVENTVGDPREHVYQMITFNEFGHAFLCEKRRVSGVFLENLELNHFPFDVQDLTIIVATTLSSSEIRLVNDPDEPHRINKQSFVDEQEWFLYKNIESEQKDMIFEYADPLSVRPALLVQCRAARRPAYFLWNLFLVTFLICSLSLVTFAVDKDLPQNRLQLSYTLVLTLIAFKFVVNQCLPKISYLTYLDKYIISNLFFLTLVCAWHGLVVVINRIIKRVNKSLSENLELYVLISISVGYGLYNLGFVLVIYLVAFKRRRQMQKLDKEYLEKVQCQIKTKGNRRARMNQQTRQIHEVKANGSTVFI 437
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Match: SMESG000039749.1 (SMESG000039749.1) HSP 1 Score: 534.643 bits (1376), Expect = 0.000e+0 Identity = 256/369 (69.38%), Postives = 314/369 (85.09%), Query Frame = 3 Query: 228 GDQNNRKRQVYVCVVFLKIGEIDTIKEQYAADILIKCKWREPRLDHNTEKLEYDWANSWTPKLYIENTIGEAKEHVYQMIIFNENQHAFLCEKRRVSGIFLENLELNHFPFDVQDLTITIASNLPSTEIRLVNDPDETHRVNKQSFVDEQEWYLFKHIETEQKELAYEYADPSSVKPAISVKCRAARRPAYFIWNIFLVTFLICSLSLVTFAVDKSLPQNRLQXXXXXXXXXXXXXXXXNQCLPKISYLTYLDKYVISSLFILTVICVWHGMIVVIERFASKSEYDLPKDMEIYVIIGMAVAFAGYNFGFIVMIYAVACKRRRIMKQRDKEYLERLQCQLKYKGARTIKMIQQTHQMHEVKENRRGTFL 1334 GD +KRQVY+CVVFLKIGEIDTIKEQ+ ADI++K KWREP LD + + L YDW+ WTPKLY+ENT+G+ +EHVYQMI FNE HAFLCEKRRVSG+FLENLELNHFPFDVQDLTI +A+ L S+EIRLVNDPDE HR+NKQSFVDEQEW+L+K+IE+EQK++ +EYADP SV+PA+ V+CRAARRPAYF+WN+FLVTFLICSLSLVTFAVDK LPQNRLQL++TLVLTL+AFKFVVNQCLPKISYLTYLDKY+IS+LF LT++C WHG++VVI R + L +++E+YV+I ++V + YN GF+++IY VA KRRR M++ DKEYLE++QCQ+K KG R +M QQT Q+HEVK N F+ Sbjct: 67 GDDTLKKRQVYICVVFLKIGEIDTIKEQFTADIIVKAKWREPSLDFHIDGLNYDWSKCWTPKLYVENTVGDPREHVYQMITFNEFGHAFLCEKRRVSGVFLENLELNHFPFDVQDLTIIVATTLSSSEIRLVNDPDEPHRINKQSFVDEQEWFLYKNIESEQKDMIFEYADPLSVRPALLVQCRAARRPAYFLWNLFLVTFLICSLSLVTFAVDKDLPQNRLQLSYTLVLTLIAFKFVVNQCLPKISYLTYLDKYIISNLFFLTLVCAWHGLVVVINRIIKRVNKSLSENLELYVLISISVGYGLYNLGFVLVIYLVAFKRRRQMQKLDKEYLEKVQCQIKTKGNRRARMNQQTRQIHEVKANGSTVFI 435 The following BLAST results are available for this feature:
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 3
BLAST of Neur_chan_LBD domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 2
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Neur_chan_LBD domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30028543 ID=SMED30028543|Name=Neur_chan_LBD domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1376bpback to top protein sequence of SMED30028543-orf-1 >SMED30028543-orf-1 ID=SMED30028543-orf-1|Name=SMED30028543-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=426bp MFSSPLININGLTQNSSPPETVFSPSDDAAMPLIDVRNRYKHESDNYSVNback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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