SMED30028520

Overview


Name	SMED30028520
Smed ID	SMED30028520
Length (bp)	565

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of SMED30028520 (SMED30028520) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30028520 (SMED30028520) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30028520 (SMED30028520) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30028520 (SMED30028520) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30028520

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 2

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication	Specimen	Lifecycle	Evidence
gut	SMED30028520	SMESG000004036.1	dd_Smed_v4_5114_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30028520	SMESG000004036.1	dd_Smed_v4_5114_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Alignments

SMED30028520 aligns in the following genomic locations:


Alignment Location	Alignment Score
v31.010412:17779..18344 -	2768
v31.041891:1452..2017 -	2759

Homology

[Close]

BLAST of SMED30028520 vs. Ensembl Human
Match: RPS27A (ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417])

HSP 1 Score: 67.3958 bits (163), Expect = 1.966e-14
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

BLAST of SMED30028520 vs. Ensembl Human
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 67.0106 bits (162), Expect = 2.100e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

[Close]

BLAST of SMED30028520 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 67.3958 bits (163), Expect = 3.293e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 49.6766 bits (117), Expect = 1.425e-7
Identity = 22/46 (47.83%), Postives = 36/46 (78.26%), Query Frame = -1

Query:  380 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFS 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122

[Close]

BLAST of SMED30028520 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 67.3958 bits (163), Expect = 4.539e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 55.4546 bits (132), Expect = 1.328e-9
Identity = 26/56 (46.43%), Postives = 41/56 (73.21%), Query Frame = -1

Query:  350 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 132

[Close]

BLAST of SMED30028520 vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 67.0106 bits (162), Expect = 5.389e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 55.4546 bits (132), Expect = 1.515e-9
Identity = 26/60 (43.33%), Postives = 43/60 (71.67%), Query Frame = -1

Query:  338 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECD 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

[Close]

BLAST of SMED30028520 vs. Ensembl Celegans
Match: ubq-2 (Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632])

HSP 1 Score: 66.2402 bits (160), Expect = 3.936e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Celegans
Match: ned-8 (NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725])

HSP 1 Score: 62.7734 bits (151), Expect = 2.094e-13
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            M I VK L GK +   +  ND ++ +K +VEEK GI   +QRLIF+G  +NDD T  +  +   S +++ L L+GG
Sbjct:    1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76

[Close]

BLAST of SMED30028520 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 67.0106 bits (162), Expect = 3.602e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 67.0106 bits (162), Expect = 3.602e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 3 Score: 67.0106 bits (162), Expect = 3.602e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

HSP 4 Score: 67.0106 bits (162), Expect = 3.602e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305

HSP 5 Score: 67.0106 bits (162), Expect = 3.602e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381

HSP 6 Score: 65.855 bits (159), Expect = 9.264e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457

HSP 7 Score: 55.0694 bits (131), Expect = 4.938e-9
Identity = 24/49 (48.98%), Postives = 39/49 (79.59%), Query Frame = -1

Query:  371 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLY 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G+Y
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGVY 505

[Close]

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 67.0106 bits (162), Expect = 3.602e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 3 Score: 67.0106 bits (162), Expect = 3.602e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

HSP 4 Score: 67.0106 bits (162), Expect = 3.602e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305

HSP 5 Score: 67.0106 bits (162), Expect = 3.602e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381

HSP 6 Score: 65.855 bits (159), Expect = 9.264e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457

HSP 7 Score: 55.0694 bits (131), Expect = 4.938e-9
Identity = 24/49 (48.98%), Postives = 39/49 (79.59%), Query Frame = -1

Query:  371 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLY 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G+Y
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGVY 505

[Close]

BLAST of SMED30028520 vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 67.0106 bits (162), Expect = 4.801e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 67.0106 bits (162), Expect = 4.801e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 3 Score: 67.0106 bits (162), Expect = 4.801e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

HSP 4 Score: 67.0106 bits (162), Expect = 4.801e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305

HSP 5 Score: 67.0106 bits (162), Expect = 4.801e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381

HSP 6 Score: 67.0106 bits (162), Expect = 4.801e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533

HSP 7 Score: 67.0106 bits (162), Expect = 4.801e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 609

HSP 8 Score: 67.0106 bits (162), Expect = 4.801e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 685

HSP 9 Score: 67.0106 bits (162), Expect = 4.801e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 761

HSP 10 Score: 66.6254 bits (161), Expect = 6.036e-13
Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:  761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836

HSP 11 Score: 65.855 bits (159), Expect = 1.222e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457

[Close]

BLAST of SMED30028520 vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0334787)

HSP 1 Score: 66.6254 bits (161), Expect = 3.383e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0077470)

HSP 1 Score: 66.6254 bits (161), Expect = 3.383e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Fly
Match: RpS27A (gene:FBgn0003942 transcript:FBtr0080016)

HSP 1 Score: 66.2402 bits (160), Expect = 8.987e-14
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

BLAST of SMED30028520 vs. Ensembl Fly
Match: Ubi-p63E (gene:FBgn0003943 transcript:FBtr0333142)

HSP 1 Score: 68.1662 bits (165), Expect = 2.353e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  685 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 761

HSP 2 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 3 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 4 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

HSP 5 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305

HSP 6 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381

HSP 7 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457

HSP 8 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533

HSP 9 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 609

HSP 10 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 685

[Close]

BLAST of SMED30028520 vs. Ensembl Fly
Match: Ubi-p63E (gene:FBgn0003943 transcript:FBtr0073178)

HSP 1 Score: 68.1662 bits (165), Expect = 2.353e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  685 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 761

HSP 2 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 3 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 4 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

HSP 5 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305

HSP 6 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381

HSP 7 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457

HSP 8 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533

HSP 9 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 609

HSP 10 Score: 67.3958 bits (163), Expect = 4.054e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 685

[Close]

BLAST of SMED30028520 vs. Ensembl Zebrafish
Match: ubb (ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10])

HSP 1 Score: 67.3958 bits (163), Expect = 8.463e-15
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

BLAST of SMED30028520 vs. Ensembl Zebrafish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7])

HSP 1 Score: 66.6254 bits (161), Expect = 4.352e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Zebrafish
Match: ubb (ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10])

HSP 1 Score: 68.5514 bits (166), Expect = 5.746e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+G +F
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGAIF 230

HSP 2 Score: 67.3958 bits (163), Expect = 1.483e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 3 Score: 67.3958 bits (163), Expect = 1.483e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

[Close]

BLAST of SMED30028520 vs. Ensembl Zebrafish
Match: rps27a (ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018])

HSP 1 Score: 65.4698 bits (158), Expect = 2.402e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

BLAST of SMED30028520 vs. Ensembl Xenopus
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:448705])

HSP 1 Score: 66.6254 bits (161), Expect = 6.400e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Xenopus
Match: ENSXETT00000033679.1 (ubiquitin C [Source:NCBI gene;Acc:448120])

HSP 1 Score: 68.5514 bits (166), Expect = 7.171e-14
Identity = 33/77 (42.86%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GGV
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 229

HSP 2 Score: 67.3958 bits (163), Expect = 2.137e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 3 Score: 67.3958 bits (163), Expect = 2.137e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

[Close]

BLAST of SMED30028520 vs. Ensembl Xenopus
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:548926])

HSP 1 Score: 65.0846 bits (157), Expect = 3.799e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

BLAST of SMED30028520 vs. Ensembl Xenopus
Match: pdcd11 (programmed cell death 11 [Source:Xenbase;Acc:XB-GENE-967218])

HSP 1 Score: 67.0106 bits (162), Expect = 1.074e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381

HSP 2 Score: 67.0106 bits (162), Expect = 1.084e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 3 Score: 67.0106 bits (162), Expect = 1.084e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 4 Score: 67.0106 bits (162), Expect = 1.084e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

HSP 5 Score: 67.0106 bits (162), Expect = 1.084e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305

HSP 6 Score: 65.0846 bits (157), Expect = 4.079e-12
Identity = 32/78 (41.03%), Postives = 56/78 (71.79%), Query Frame = -1

Query:  287 IMQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 520
            IMQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  ++ + +I+  S +++ L L+GG+
Sbjct:  424 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYNIQKESTLHLVLRLRGGM 501

HSP 7 Score: 63.929 bits (154), Expect = 1.028e-11
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  577 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGGM 653

HSP 8 Score: 63.5438 bits (153), Expect = 1.448e-11
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  501 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGGM 577

[Close]

BLAST of SMED30028520 vs. Ensembl Xenopus
Match: pdcd11 (programmed cell death 11 [Source:Xenbase;Acc:XB-GENE-967218])

HSP 1 Score: 67.0106 bits (162), Expect = 1.138e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  316 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 392

HSP 2 Score: 67.0106 bits (162), Expect = 1.149e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   12 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 88

HSP 3 Score: 67.0106 bits (162), Expect = 1.149e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   88 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 164

HSP 4 Score: 67.0106 bits (162), Expect = 1.149e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  164 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 240

HSP 5 Score: 67.0106 bits (162), Expect = 1.149e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  240 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 316

HSP 6 Score: 65.0846 bits (157), Expect = 4.493e-12
Identity = 32/78 (41.03%), Postives = 56/78 (71.79%), Query Frame = -1

Query:  287 IMQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 520
            IMQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  ++ + +I+  S +++ L L+GG+
Sbjct:  435 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYNIQKESTLHLVLRLRGGM 512

HSP 7 Score: 63.929 bits (154), Expect = 1.121e-11
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  588 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGGM 664

HSP 8 Score: 63.5438 bits (153), Expect = 1.436e-11
Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:  664 MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGG 739

HSP 9 Score: 63.5438 bits (153), Expect = 1.565e-11
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  512 MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNIQKESTLHLVLRLRGGM 588

[Close]

BLAST of SMED30028520 vs. Ensembl Mouse
Match: Gm8797 (predicted pseudogene 8797 [Source:MGI Symbol;Acc:MGI:3643769])

HSP 1 Score: 67.0106 bits (162), Expect = 1.044e-14
Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of SMED30028520 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 67.0106 bits (162), Expect = 1.589e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Mouse
Match: Kxd1 (KxDL motif containing 1 [Source:MGI Symbol;Acc:MGI:1922870])

HSP 1 Score: 68.9366 bits (167), Expect = 2.092e-14
Identity = 35/84 (41.67%), Postives = 58/84 (69.05%), Query Frame = -1

Query:  287 FYPDF*IMQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 538
            F PD   MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   99 FSPDA-NMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 181

[Close]

BLAST of SMED30028520 vs. Ensembl Mouse
Match: Gm11808 (predicted gene 11808 [Source:MGI Symbol;Acc:MGI:3649356])

HSP 1 Score: 66.6254 bits (161), Expect = 4.847e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 66.6254 bits (161), Expect = 4.847e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. UniProt/SwissProt
Match: sp|P62975|UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus OX=9986 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.117e-14
Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of SMED30028520 vs. UniProt/SwissProt
Match: sp|P68197|UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata OX=7213 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.117e-14
Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of SMED30028520 vs. UniProt/SwissProt
Match: sp|Q865C5|UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 7.117e-14
Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of SMED30028520 vs. UniProt/SwissProt
Match: sp|P0CG54|UBB_CAVPO (Polyubiquitin-B OS=Cavia porcellus OX=10141 GN=UBB PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.552e-13
Identity = 33/82 (40.24%), Postives = 58/82 (70.73%), Query Frame = -1

Query:  272 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVFRNIV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GGV+ + +
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVYASPI 310

HSP 2 Score: 67.3958 bits (163), Expect = 2.093e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 3 Score: 67.3958 bits (163), Expect = 2.093e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 4 Score: 67.3958 bits (163), Expect = 2.093e-12
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

[Close]

BLAST of SMED30028520 vs. UniProt/SwissProt
Match: sp|P14795|RL40_TRYCR (Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma cruzi OX=5693 GN=FUS1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 1.981e-13
Identity = 33/78 (42.31%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GGV 
Sbjct:    1 MQIFVKTLTGKTIALEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGVM 78

[Close]

BLAST of SMED30028520 vs. TrEMBL
Match: A0A2G9GXQ2 (Ubiquitin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17357 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.559e-13
Identity = 33/78 (42.31%), Postives = 54/78 (69.23%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V   DT++++K ++EEK G+   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG F
Sbjct:    1 MQIFVKTLTGKTITLEVESTDTVENVKSKIEEKEGVPPAQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAF 78

[Close]

BLAST of SMED30028520 vs. TrEMBL
Match: A0A3Q3VUQ8 (Ubiquitin-like domain-containing protein OS=Mola mola OX=94237 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.561e-13
Identity = 34/84 (40.48%), Postives = 59/84 (70.24%), Query Frame = -1

Query:  266 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVFRNIVNL 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG++ +I  L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIYPSIYRL 84

[Close]

BLAST of SMED30028520 vs. TrEMBL
Match: Q0N477 (Ubiquitin OS=Clanis bilineata nucleopolyhedrovirus OX=1307957 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.648e-13
Identity = 37/81 (45.68%), Postives = 56/81 (69.14%), Query Frame = -1

Query:  275 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVFRNI 517
            MQIFVK L GKS++ +V  +DTI+SLK ++ +K GI   +QR+IF+G  L DD TV + +I+  S +++ L L+GG +  I
Sbjct:    1 MQIFVKTLTGKSITVEVESSDTIESLKQKITDKEGIPPDQQRIIFAGKQLEDDRTVGDYNIQKESTLHLVLRLRGGNYYTI 81

[Close]

BLAST of SMED30028520 vs. TrEMBL
Match: A0A3P8Z2P0 (Ubiquitin B OS=Esox lucius OX=8010 GN=UBB PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.418e-13
Identity = 33/79 (41.77%), Postives = 57/79 (72.15%), Query Frame = -1

Query:  281 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVFR 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG++R
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIYR 79

[Close]

BLAST of SMED30028520 vs. TrEMBL
Match: Q9YVU8 (ORF MSV144 putative ubiquitin, similar to Neurospora crassa GB:U01220 OS=Melanoplus sanguinipes entomopoxvirus OX=83191 GN=MSV144 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.496e-13
Identity = 33/77 (42.86%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIF+K L GK+++ ++  NDTI +LK ++++K GI   +QRLIF+G  L D  T+E+ +I+  S +++ L L+GG+
Sbjct:    1 MQIFIKTLTGKTITIEIEANDTISNLKQKIQDKEGIPPDQQRLIFAGKQLEDSRTLEDYNIQKESTLHLVLRLRGGI 77

[Close]

BLAST of SMED30028520 vs. Ensembl Cavefish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:103027541])

HSP 1 Score: 66.6254 bits (161), Expect = 3.688e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Cavefish
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:103044043])

HSP 1 Score: 65.4698 bits (158), Expect = 2.036e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

BLAST of SMED30028520 vs. Ensembl Cavefish
Match: si:ch211-202a12.4 (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 67.3958 bits (163), Expect = 3.893e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   84 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 160

HSP 2 Score: 67.3958 bits (163), Expect = 3.893e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 236

HSP 3 Score: 59.6918 bits (143), Expect = 1.622e-10
Identity = 28/72 (38.89%), Postives = 51/72 (70.83%), Query Frame = -1

Query:  287 KDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 502
            KDL GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  317 KDLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 388

HSP 4 Score: 46.595 bits (109), Expect = 5.100e-6
Identity = 22/57 (38.60%), Postives = 40/57 (70.18%), Query Frame = -1

Query:  287 DTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 457
            DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   28 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 84

[Close]

BLAST of SMED30028520 vs. Ensembl Cavefish
Match: nedd8 (NEDD8 [Source:NCBI gene;Acc:103040682])

HSP 1 Score: 61.2326 bits (147), Expect = 1.715e-12
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = -1

Query:  269 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVFRNIVN 517
            M I VK L GK +   +   D ++ +K +VEEK GI   +QRLI+SG  +ND+ T  +  I+  S +++ L L+GG      N
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGGRGHQRAN 83

[Close]

BLAST of SMED30028520 vs. Ensembl Sea Lamprey
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 68.5514 bits (166), Expect = 2.650e-14
Identity = 33/80 (41.25%), Postives = 57/80 (71.25%), Query Frame = -1

Query:  287 F*IMQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 526
            + IMQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   11 YLIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 90

HSP 2 Score: 67.0106 bits (162), Expect = 9.143e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   90 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 166

HSP 3 Score: 67.0106 bits (162), Expect = 9.143e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  166 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 242

HSP 4 Score: 67.0106 bits (162), Expect = 9.143e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  242 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 318

HSP 5 Score: 67.0106 bits (162), Expect = 9.143e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  318 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 394

[Close]

BLAST of SMED30028520 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006254.1 (pep scaffold:Pmarinus_7.0:GL477433:3744:20801:-1 gene:ENSPMAG00000005642.1 transcript:ENSPMAT00000006254.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 54.299 bits (129), Expect = 2.726e-9
Identity = 24/71 (33.80%), Postives = 42/71 (59.15%), Query Frame = -1

Query:  302 QIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 514
            Q+ VKDL+GKS+   V  ++T+  LK +++ K  +   +QRL + G  L D  T+ +C +K  S +N+  +
Sbjct:  229 QVVVKDLEGKSLRLMVKLSETVLELKARIQSKWKVSPAQQRLAYGGTALQDGTTLAKCGLKQNSTVNLLHV 299

HSP 2 Score: 49.2914 bits (116), Expect = 1.227e-7
Identity = 22/70 (31.43%), Postives = 40/70 (57.14%), Query Frame = -1

Query:  302 IFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 511
            I VKDL+G S+   V  ++++  LK +++ K  +   +QRL + G  L D  T+ +C +K  S +N+  +
Sbjct:   79 IVVKDLEGNSLRLMVKLSESVLELKARIQSKWKVSPAQQRLAYGGTALQDGTTLAKCGLKQNSTVNLLHV 148

HSP 3 Score: 48.9062 bits (115), Expect = 1.553e-7
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = -1

Query:  290 IFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 511
            +FVK L  K+++ +V  ++++ SLK +V +K GI V +Q L F    L DD  +E   I+  S I +   L+GG
Sbjct:  154 VFVKTLANKTLTIEVKLSNSVLSLKQKVHQKAGIAVNQQILTFGSHTLEDDQKLESYGIQQHSTITMQGRLRGG 227

HSP 4 Score: 48.9062 bits (115), Expect = 1.553e-7
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = -1

Query:  290 IFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 511
            +FVK L  K+++ +V  ++++ SLK +V +K GI V +Q L F    L DD  +E   I+  S I +   L+GG
Sbjct:  305 VFVKTLANKTLTIEVKLSNSVLSLKQKVHQKAGIAVNQQILTFGSHTLEDDQKLESYGIQQHSTITMQGRLRGG 378

[Close]

BLAST of SMED30028520 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006261.1 (pep scaffold:Pmarinus_7.0:GL477433:28222:29567:1 gene:ENSPMAG00000005664.1 transcript:ENSPMAT00000006261.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 50.447 bits (119), Expect = 1.296e-8
Identity = 22/72 (30.56%), Postives = 42/72 (58.33%), Query Frame = -1

Query:  302 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 517
            +QI VKDL+G S+    + ++++  LK +++ K  +   +QRL + G  L D  T+ +C +K  S +N+  +
Sbjct:    1 VQIVVKDLEGNSLRLMANLSESVLELKARIQSKWKVSPAQQRLAYGGTALQDGTTLAKCGLKQNSTVNLLHV 72

HSP 2 Score: 48.9062 bits (115), Expect = 5.214e-8
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = -1

Query:  290 IFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 511
            +FVK L  K+++ +V  ++++ SLK +V +K GI V +Q L F    L DD  +E   I+  S I +   L+GG
Sbjct:   78 VFVKTLANKTLTIEVKLSNSVLSLKQKVHQKAGIAVNQQILTFGSHTLEDDQKLESYGIQQHSTITMQGRLRGG 151

[Close]

BLAST of SMED30028520 vs. Ensembl Sea Lamprey
Match: zfand4 (zinc finger, AN1-type domain 4 [Source:ZFIN;Acc:ZDB-GENE-090312-102])

HSP 1 Score: 43.8986 bits (102), Expect = 8.401e-6
Identity = 21/82 (25.61%), Postives = 44/82 (53.66%), Query Frame = -1

Query:  290 YPDF*IMQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 535
            +P +  M++ ++ L G     +VS  +++ S+K +++   GI + +Q LI+  + L DD  + +  I     I + L ++GG
Sbjct:   22 FPFYETMEVLIETLTGTFFEIRVSPFESVMSVKAKIQRLEGIPITQQHLIWRNIELEDDYCLHDYHITHGCTIKLVLAMRGG 103

[Close]

BLAST of SMED30028520 vs. Ensembl Yeast
Match: RPL40B (Ubiquitin-ribosomal 60S subunit protein L40B fusion protein; cleaved to yield ubiquitin and ribosomal protein L40B; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40B has a paralog, RPL40A, that arose from the whole genome duplication [Source:SGD;Acc:S000001802])

HSP 1 Score: 64.6994 bits (156), Expect = 2.629e-14
Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI ++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Yeast
Match: RPL40A (Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001410])

HSP 1 Score: 64.6994 bits (156), Expect = 2.629e-14
Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI ++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Yeast
Match: UBI4 (Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003962])

HSP 1 Score: 65.0846 bits (157), Expect = 2.936e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI ++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 65.0846 bits (157), Expect = 2.936e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI ++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 3 Score: 65.0846 bits (157), Expect = 2.936e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI ++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

HSP 4 Score: 65.0846 bits (157), Expect = 2.936e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI ++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305

HSP 5 Score: 64.6994 bits (156), Expect = 3.770e-13
Identity = 32/76 (42.11%), Postives = 53/76 (69.74%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI ++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:  305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380

[Close]

BLAST of SMED30028520 vs. Ensembl Yeast
Match: RPS31 (Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog [Source:SGD;Acc:S000004157])

HSP 1 Score: 55.8398 bits (133), Expect = 8.006e-11
Identity = 28/69 (40.58%), Postives = 48/69 (69.57%), Query Frame = -1

Query:  311 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINV 517
            MQIFVK L GK+++ +V  +DTI ++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 69

[Close]

BLAST of SMED30028520 vs. Ensembl Yeast
Match: RUB1 (Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme) [Source:SGD;Acc:S000002546])

HSP 1 Score: 49.6766 bits (117), Expect = 3.373e-9
Identity = 27/76 (35.53%), Postives = 46/76 (60.53%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            M + VK L GK +S ++ ++D +  +K  +EEK GI   +QRLIF G  ++D  TV +  + +   +++ L L+GG
Sbjct:    1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76

[Close]

BLAST of SMED30028520 vs. Ensembl Nematostella
Match: EDO45561 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSG9])

HSP 1 Score: 67.3958 bits (163), Expect = 1.131e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

[Close]

BLAST of SMED30028520 vs. Ensembl Nematostella
Match: EDO32403 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SV54])

HSP 1 Score: 67.3958 bits (163), Expect = 4.688e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 67.3958 bits (163), Expect = 4.688e-14
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 3 Score: 65.4698 bits (158), Expect = 2.268e-13
Identity = 31/76 (40.79%), Postives = 53/76 (69.74%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QR IF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228

[Close]

BLAST of SMED30028520 vs. Ensembl Nematostella
Match: EDO48503 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJ25])

HSP 1 Score: 65.4698 bits (158), Expect = 6.285e-14
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

BLAST of SMED30028520 vs. Ensembl Nematostella
Match: EDO32547 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUP6])

HSP 1 Score: 67.3958 bits (163), Expect = 1.504e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 67.3958 bits (163), Expect = 1.504e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 3 Score: 67.3958 bits (163), Expect = 1.504e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

HSP 4 Score: 67.3958 bits (163), Expect = 1.504e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305

HSP 5 Score: 67.3958 bits (163), Expect = 1.504e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381

HSP 6 Score: 67.3958 bits (163), Expect = 1.504e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457

HSP 7 Score: 67.0106 bits (162), Expect = 1.909e-13
Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532

[Close]

BLAST of SMED30028520 vs. Ensembl Nematostella
Match: EDO31255 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYF9])

HSP 1 Score: 59.6918 bits (143), Expect = 1.814e-12
Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = -1

Query:  305 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIK--DCSFINVCL 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  + S +N  L
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKGNSSTVNSSL 73

[Close]

BLAST of SMED30028520 vs. Ensembl Medaka
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:101169681])

HSP 1 Score: 66.2402 bits (160), Expect = 5.188e-14
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+ 
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGII 78

[Close]

BLAST of SMED30028520 vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 66.2402 bits (160), Expect = 1.466e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

BLAST of SMED30028520 vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 65.855 bits (159), Expect = 1.495e-13
Identity = 32/77 (41.56%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG 
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGA 77

[Close]

BLAST of SMED30028520 vs. Ensembl Medaka
Match: ubb (ubiquitin C [Source:NCBI gene;Acc:101172100])

HSP 1 Score: 67.3958 bits (163), Expect = 4.731e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 77

HSP 2 Score: 67.3958 bits (163), Expect = 4.731e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 153

HSP 3 Score: 67.3958 bits (163), Expect = 4.731e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 229

HSP 4 Score: 67.3958 bits (163), Expect = 4.731e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 305

HSP 5 Score: 67.3958 bits (163), Expect = 4.731e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 381

HSP 6 Score: 67.3958 bits (163), Expect = 4.731e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 457

HSP 7 Score: 67.3958 bits (163), Expect = 4.731e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  554 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 630

HSP 8 Score: 67.3958 bits (163), Expect = 4.731e-13
Identity = 32/77 (41.56%), Postives = 55/77 (71.43%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG+
Sbjct:  630 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 706

HSP 9 Score: 67.0106 bits (162), Expect = 5.948e-13
Identity = 32/76 (42.11%), Postives = 54/76 (71.05%), Query Frame = -1

Query:  290 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGG 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+GG
Sbjct:  706 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 781

HSP 10 Score: 66.2402 bits (160), Expect = 1.149e-12
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  284 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVF 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L L+G V+
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGVVY 534

[Close]

BLAST of SMED30028520 vs. Ensembl Medaka
Match: ENSORLT00000015052.2 (pep primary_assembly:ASM223467v1:12:2267197:2268484:1 gene:ENSORLG00000012019.2 transcript:ENSORLT00000015052.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 60.8474 bits (146), Expect = 4.927e-12
Identity = 31/80 (38.75%), Postives = 52/80 (65.00%), Query Frame = -1

Query:  278 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVFRN 517
            MQIFVK L GK+++ +V  +DTI+++K ++++K GI   +QRLIF+G  L D  T+ + +I+  S +++ L   G    N
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLQTPGSTDAN 80

[Close]

BLAST of SMED30028520 vs. Planmine SMEST
Match: SMESG000004036.1 (SMESG000004036.1)

HSP 1 Score: 174.866 bits (442), Expect = 4.880e-57
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = -1

Query:  248 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVFRNIVNLKKFIFQ 517
            MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVC+ILKGGVFRNIVNLKKFIFQ
Sbjct:    1 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCVILKGGVFRNIVNLKKFIFQ 90

[Close]

BLAST of SMED30028520 vs. Planmine SMEST
Match: SMESG000004032.1 (SMESG000004032.1)

HSP 1 Score: 128.257 bits (321), Expect = 1.061e-38
Identity = 67/90 (74.44%), Postives = 74/90 (82.22%), Query Frame = -1

Query:  248 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGVFRNIVNLKKFIFQ 517
            M+I+VKD+ GK M FQVSKNDTIKSLKLQ+E KTG KV EQRLIFSGLYL DDDT E+C IKD   IN+   + GGVFRNIVNLKKFIFQ
Sbjct:    1 MKIYVKDVIGKVMCFQVSKNDTIKSLKLQIEGKTGFKVKEQRLIFSGLYLYDDDTFEKCRIKDHYNINIIAYITGGVFRNIVNLKKFIFQ 90

[Close]

BLAST of SMED30028520 vs. Planmine SMEST
Match: SMESG000048258.1 (SMESG000048258.1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.200e-15
Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIF K +DGK+++F+V K + I+ +KL+++EK G+   EQRL++ G  L D+ TVE+  I + S INV   L+GG+
Sbjct:  836 MQIFAKTMDGKTVAFEVRKAEKIRDVKLKIQEKIGLAPGEQRLVYQGGILEDERTVEDYGIAEKSVINVPARLRGGM 912

HSP 2 Score: 67.3958 bits (163), Expect = 3.602e-13
Identity = 31/71 (43.66%), Postives = 49/71 (69.01%), Query Frame = -1

Query:  305 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCL 517
            MQIF K +DGK+++F+V K + I+ +KL+++EK G+   EQRL++ G  L D+ TVE+  I + S I V +
Sbjct:  465 MQIFAKTMDGKTVAFEVRKAEKIRDVKLKIQEKIGLAPGEQRLVYQGGILEDERTVEDYGIAEKSVITVAI 535

HSP 3 Score: 66.6254 bits (161), Expect = 6.262e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = -1

Query:  248 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGG--VFRNIVNLKKFIFQ 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG  +F   ++ K   F+
Sbjct:  388 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGMQIFAKTMDGKTVAFE 480

HSP 4 Score: 66.6254 bits (161), Expect = 6.262e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = -1

Query:  248 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGG--VFRNIVNLKKFIFQ 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG  +F   ++ K   F+
Sbjct:  759 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGMQIFAKTMDGKTVAFE 851

HSP 5 Score: 65.855 bits (159), Expect = 1.280e-12
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGGV 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG+
Sbjct:  163 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGM 240

HSP 6 Score: 65.855 bits (159), Expect = 1.280e-12
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGGV 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG+
Sbjct:  538 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGM 615

HSP 7 Score: 64.6994 bits (156), Expect = 3.415e-12
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = -1

Query:  308 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVC 517
            MQIF K +DGK+++ +V K + I+ +KL+++EK G+   EQ L++ G  L D+ TVEE  I + S INV 
Sbjct:  912 MQIFAKTMDGKTVAIEVQKTEKIRDIKLKIQEKIGLAPDEQILVYQGGILEDERTVEEYQIAEKSVINVV 981

HSP 8 Score: 57.3806 bits (137), Expect = 9.915e-10
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = -1

Query:  302 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 517
            MQIF K  DGK +  +V K DTI+ +KL+++ + G+   E +L++ G  L D+ T E+  I D S I+V  I
Sbjct:  314 MQIFPKTGDGKIVPIEVQKTDTIRDVKLRIQNQIGLAPDEPKLVYQGGILEDERTAEDYGIADESMIDVVAI 385

HSP 9 Score: 56.225 bits (134), Expect = 2.555e-9
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = -1

Query:  302 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 517
            MQIF   +D K +  +V K DTI+ +KL+++EK G+   EQ L++ G  L D+ T E+  I D S I+V  I
Sbjct:  240 MQIFAITVDCKIVPIEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILEDERTAEDYGIADESMIDVVAI 311

HSP 10 Score: 53.1434 bits (126), Expect = 2.539e-8
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = -1

Query:  314 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFIN 517
            MQIF   +D K +  +V K DTI+ +KL+++EK G+   EQ L++ G  L D+ T E+  I D S I+
Sbjct:  615 MQIFAITVDCKIVPIEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILEDERTAEDYGIADESMID 682

HSP 11 Score: 49.2914 bits (116), Expect = 4.972e-7
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = -1

Query:  302 DGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 493
            DGK +  +V K DTI+ +KL+++ + G+   E +L++ G  L D+ T E+  I D S I+V  I
Sbjct:  693 DGKIVPIEVQKTDTIRDVKLRIQNQIGLAPDEPKLVYQGGILEDERTAEDYGIADESMIDVVAI 756

HSP 12 Score: 48.521 bits (114), Expect = 1.015e-6
Identity = 23/71 (32.39%), Postives = 43/71 (60.56%), Query Frame = -1

Query:  305 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCL 517
            MQ++++ + G +    V K D I+ +KL+++ + G+   EQ+L++ G  L D+ TVE+  I + S I V +
Sbjct:   90 MQMYLRRVGGTTELVTVGKADKIRDVKLRIQNQIGLAPDEQKLVYQGGILEDERTVEDYGIAEKSVITVAI 160

[Close]

BLAST of SMED30028520 vs. Planmine SMEST
Match: SMESG000048258.1 (SMESG000048258.1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.254e-15
Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIF K +DGK+++F+V K + I+ +KL+++EK G+   EQRL++ G  L D+ TVE+  I + S INV   L+GG+
Sbjct:  819 MQIFAKTMDGKTVAFEVRKAEKIRDVKLKIQEKIGLAPGEQRLVYQGGILEDERTVEDYGIAEKSVINVPARLRGGM 895

HSP 2 Score: 67.3958 bits (163), Expect = 3.949e-13
Identity = 31/71 (43.66%), Postives = 49/71 (69.01%), Query Frame = -1

Query:  305 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCL 517
            MQIF K +DGK+++F+V K + I+ +KL+++EK G+   EQRL++ G  L D+ TVE+  I + S I V +
Sbjct:  448 MQIFAKTMDGKTVAFEVRKAEKIRDVKLKIQEKIGLAPGEQRLVYQGGILEDERTVEDYGIAEKSVITVAI 518

HSP 3 Score: 66.6254 bits (161), Expect = 6.866e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = -1

Query:  248 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGG--VFRNIVNLKKFIFQ 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG  +F   ++ K   F+
Sbjct:  371 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGMQIFAKTMDGKTVAFE 463

HSP 4 Score: 66.6254 bits (161), Expect = 6.866e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = -1

Query:  248 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGG--VFRNIVNLKKFIFQ 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG  +F   ++ K   F+
Sbjct:  742 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGMQIFAKTMDGKTVAFE 834

HSP 5 Score: 65.855 bits (159), Expect = 1.325e-12
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGGV 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG+
Sbjct:  146 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGM 223

HSP 6 Score: 65.855 bits (159), Expect = 1.325e-12
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGGV 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG+
Sbjct:  521 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGM 598

HSP 7 Score: 64.3142 bits (155), Expect = 3.779e-12
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = -1

Query:  308 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVC 517
            MQIF K +DGK+++ +V K + I+ +KL+++EK G+   EQ L++ G  L D+ TVEE  I + S INV 
Sbjct:  895 MQIFAKTMDGKTVAIEVQKTEKIRDIKLKIQEKIGLAPDEQILVYQGGILEDERTVEEYQIAEKSVINVV 964

HSP 8 Score: 57.3806 bits (137), Expect = 9.975e-10
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = -1

Query:  302 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 517
            MQIF K  DGK +  +V K DTI+ +KL+++ + G+   E +L++ G  L D+ T E+  I D S I+V  I
Sbjct:  297 MQIFPKTGDGKIVPIEVQKTDTIRDVKLRIQNQIGLAPDEPKLVYQGGILEDERTAEDYGIADESMIDVVAI 368

HSP 9 Score: 56.225 bits (134), Expect = 2.571e-9
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = -1

Query:  302 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 517
            MQIF   +D K +  +V K DTI+ +KL+++EK G+   EQ L++ G  L D+ T E+  I D S I+V  I
Sbjct:  223 MQIFAITVDCKIVPIEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILEDERTAEDYGIADESMIDVVAI 294

HSP 10 Score: 53.1434 bits (126), Expect = 2.554e-8
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = -1

Query:  314 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFIN 517
            MQIF   +D K +  +V K DTI+ +KL+++EK G+   EQ L++ G  L D+ T E+  I D S I+
Sbjct:  598 MQIFAITVDCKIVPIEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILEDERTAEDYGIADESMID 665

HSP 11 Score: 49.2914 bits (116), Expect = 4.862e-7
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = -1

Query:  302 DGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 493
            DGK +  +V K DTI+ +KL+++ + G+   E +L++ G  L D+ T E+  I D S I+V  I
Sbjct:  676 DGKIVPIEVQKTDTIRDVKLRIQNQIGLAPDEPKLVYQGGILEDERTAEDYGIADESMIDVVAI 739

HSP 12 Score: 48.521 bits (114), Expect = 1.090e-6
Identity = 23/71 (32.39%), Postives = 43/71 (60.56%), Query Frame = -1

Query:  305 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCL 517
            MQ++++ + G +    V K D I+ +KL+++ + G+   EQ+L++ G  L D+ TVE+  I + S I V +
Sbjct:   73 MQMYLRRVGGTTELVTVGKADKIRDVKLRIQNQIGLAPDEQKLVYQGGILEDERTVEDYGIAEKSVITVAI 143

[Close]

BLAST of SMED30028520 vs. Planmine SMEST
Match: SMESG000048258.1 (SMESG000048258.1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.370e-15
Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLILKGGV 517
            MQIF K +DGK+++F+V K + I+ +KL+++EK G+   EQRL++ G  L D+ TVE+  I + S INV   L+GG+
Sbjct:  836 MQIFAKTMDGKTVAFEVRKAEKIRDVKLKIQEKIGLAPGEQRLVYQGGILEDERTVEDYGIAEKSVINVPARLRGGM 912

HSP 2 Score: 67.0106 bits (162), Expect = 4.229e-13
Identity = 31/71 (43.66%), Postives = 49/71 (69.01%), Query Frame = -1

Query:  305 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCL 517
            MQIF K +DGK+++F+V K + I+ +KL+++EK G+   EQRL++ G  L D+ TVE+  I + S I V +
Sbjct:  465 MQIFAKTMDGKTVAFEVRKAEKIRDVKLKIQEKIGLAPGEQRLVYQGGILEDERTVEDYGIAEKSVITVAI 535

HSP 3 Score: 66.2402 bits (160), Expect = 7.711e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = -1

Query:  248 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGG--VFRNIVNLKKFIFQ 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG  +F   ++ K   F+
Sbjct:  388 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGMQIFAKTMDGKTVAFE 480

HSP 4 Score: 66.2402 bits (160), Expect = 7.711e-13
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = -1

Query:  248 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGG--VFRNIVNLKKFIFQ 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG  +F   ++ K   F+
Sbjct:  759 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGMQIFAKTMDGKTVAFE 851

HSP 5 Score: 65.4698 bits (158), Expect = 1.446e-12
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGGV 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG+
Sbjct:  163 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGM 240

HSP 6 Score: 65.4698 bits (158), Expect = 1.446e-12
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = -1

Query:  287 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDD-TVEECDIKDCSFINVCLILKGGV 517
            M I  K +DGK+++F+V K DTI+ +KL+++EK G+   EQ L++ G  L +D+ TVEE  I + S INV    +GG+
Sbjct:  538 MVILAKTMDGKTVAFEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILYEDERTVEEYQIAEKSVINVVARPRGGM 615

HSP 7 Score: 64.3142 bits (155), Expect = 4.085e-12
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = -1

Query:  308 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVC 517
            MQIF K +DGK+++ +V K + I+ +KL+++EK G+   EQ L++ G  L D+ TVEE  I + S INV 
Sbjct:  912 MQIFAKTMDGKTVAIEVQKTEKIRDIKLKIQEKIGLAPDEQILVYQGGILEDERTVEEYQIAEKSVINVV 981

HSP 8 Score: 57.3806 bits (137), Expect = 1.098e-9
Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = -1

Query:  302 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 517
            MQIF K  DGK +  +V K DTI+ +KL+++ + G+   E +L++ G  L D+ T E+  I D S I+V  I
Sbjct:  314 MQIFPKTGDGKIVPIEVQKTDTIRDVKLRIQNQIGLAPDEPKLVYQGGILEDERTAEDYGIADESMIDVVAI 385

HSP 9 Score: 56.225 bits (134), Expect = 2.777e-9
Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = -1

Query:  302 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 517
            MQIF   +D K +  +V K DTI+ +KL+++EK G+   EQ L++ G  L D+ T E+  I D S I+V  I
Sbjct:  240 MQIFAITVDCKIVPIEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILEDERTAEDYGIADESMIDVVAI 311

HSP 10 Score: 53.1434 bits (126), Expect = 2.758e-8
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = -1

Query:  314 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFIN 517
            MQIF   +D K +  +V K DTI+ +KL+++EK G+   EQ L++ G  L D+ T E+  I D S I+
Sbjct:  615 MQIFAITVDCKIVPIEVQKTDTIRDVKLKIQEKVGVAPDEQILVYQGGILEDERTAEDYGIADESMID 682

HSP 11 Score: 49.2914 bits (116), Expect = 5.348e-7
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = -1

Query:  302 DGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCLI 493
            DGK +  +V K DTI+ +KL+++ + G+   E +L++ G  L D+ T E+  I D S I+V  I
Sbjct:  693 DGKIVPIEVQKTDTIRDVKLRIQNQIGLAPDEPKLVYQGGILEDERTAEDYGIADESMIDVVAI 756

HSP 12 Score: 48.521 bits (114), Expect = 1.112e-6
Identity = 23/71 (32.39%), Postives = 43/71 (60.56%), Query Frame = -1

Query:  305 MQIFVKDLDGKSMSFQVSKNDTIKSLKLQVEEKTGIKVIEQRLIFSGLYLNDDDTVEECDIKDCSFINVCL 517
            MQ++++ + G +    V K D I+ +KL+++ + G+   EQ+L++ G  L D+ TVE+  I + S I V +
Sbjct:   90 MQMYLRRVGGTTELVTVGKADKIRDVKLRIQNQIGLAPDEQKLVYQGGILEDERTVEDYGIAEKSVITVAI 160

The following BLAST results are available for this feature:

BLAST of SMED30028520 vs. Ensembl Human
BLAST of SMED30028520 vs. Ensembl Celegans
BLAST of SMED30028520 vs. Ensembl Fly
BLAST of SMED30028520 vs. Ensembl Zebrafish
BLAST of SMED30028520 vs. Ensembl Xenopus
BLAST of SMED30028520 vs. Ensembl Mouse
BLAST of SMED30028520 vs. UniProt/SwissProt
BLAST of SMED30028520 vs. TrEMBL
BLAST of SMED30028520 vs. Ensembl Cavefish
BLAST of SMED30028520 vs. Ensembl Sea Lamprey
BLAST of SMED30028520 vs. Ensembl Yeast
BLAST of SMED30028520 vs. Ensembl Nematostella
BLAST of SMED30028520 vs. Ensembl Medaka
BLAST of SMED30028520 vs. Planmine SMEST

BLAST of SMED30028520 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RPS27A	1.966e-14	41.56	ribosomal protein S27a [Source:HGNC Symbol;Acc:HGN...	[more]
UBB	2.100e-14	41.56	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]
UBC	3.293e-14	41.56	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]
UBC	4.539e-14	41.56	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]
UBC	5.389e-14	41.56	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]

BLAST of SMED30028520 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ubq-2	3.936e-14	41.03	Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ...	[more]
ned-8	2.094e-13	40.79	NEDD8 [Source:UniProtKB/Swiss-Prot;Acc:Q93725]	[more]
ubq-1	3.602e-13	41.56	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	3.602e-13	41.56	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	4.801e-13	41.56	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]

BLAST of SMED30028520 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RpL40	3.383e-14	41.03	gene:FBgn0003941 transcript:FBtr0334787	[more]
RpL40	3.383e-14	41.03	gene:FBgn0003941 transcript:FBtr0077470	[more]
RpS27A	8.987e-14	41.56	gene:FBgn0003942 transcript:FBtr0080016	[more]
Ubi-p63E	2.353e-13	41.56	gene:FBgn0003943 transcript:FBtr0333142	[more]
Ubi-p63E	2.353e-13	41.56	gene:FBgn0003943 transcript:FBtr0073178	[more]

BLAST of SMED30028520 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ubb	8.463e-15	41.56	ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]	[more]
uba52	4.352e-14	41.03	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
ubb	5.746e-14	41.03	ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]	[more]
rps27a	2.402e-13	41.56	ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
rps27a	2.402e-13	41.56	ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0...	[more]

BLAST of SMED30028520 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
uba52	6.400e-14	41.03	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
ENSXETT00000033679.1	7.171e-14	42.86	ubiquitin C [Source:NCBI gene;Acc:448120]	[more]
rps27a	3.799e-13	41.56	ribosomal protein S27a [Source:NCBI gene;Acc:54892...	[more]
pdcd11	1.074e-12	41.56	programmed cell death 11 [Source:Xenbase;Acc:XB-GE...	[more]
pdcd11	1.138e-12	41.56	programmed cell death 11 [Source:Xenbase;Acc:XB-GE...	[more]

BLAST of SMED30028520 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Gm8797	1.044e-14	42.11	predicted pseudogene 8797 [Source:MGI Symbol;Acc:M...	[more]
Uba52	1.589e-14	41.03	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
Kxd1	2.092e-14	41.67	KxDL motif containing 1 [Source:MGI Symbol;Acc:MGI...	[more]
Gm11808	4.847e-14	41.03	predicted gene 11808 [Source:MGI Symbol;Acc:MGI:36...	[more]
Uba52	4.847e-14	41.03	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]

BLAST of SMED30028520 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P62975\|UBIQ_RABIT	7.117e-14	42.11	Ubiquitin OS=Oryctolagus cuniculus OX=9986 PE=1 SV...	[more]
sp\|P68197\|UBIQ_CERCA	7.117e-14	42.11	Ubiquitin OS=Ceratitis capitata OX=7213 PE=1 SV=1	[more]
sp\|Q865C5\|UBIQ_CAMDR	7.117e-14	42.11	Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2	[more]
sp\|P0CG54\|UBB_CAVPO	1.552e-13	40.24	Polyubiquitin-B OS=Cavia porcellus OX=10141 GN=UBB...	[more]
sp\|P14795\|RL40_TRYCR	1.981e-13	42.31	Ubiquitin-60S ribosomal protein L40 OS=Trypanosoma...	[more]

BLAST of SMED30028520 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A2G9GXQ2	1.559e-13	42.31	Ubiquitin-like protein OS=Handroanthus impetiginos...	[more]
A0A3Q3VUQ8	1.561e-13	40.48	Ubiquitin-like domain-containing protein OS=Mola m...	[more]
Q0N477	4.648e-13	45.68	Ubiquitin OS=Clanis bilineata nucleopolyhedrovirus...	[more]
A0A3P8Z2P0	5.418e-13	41.77	Ubiquitin B OS=Esox lucius OX=8010 GN=UBB PE=4 SV=...	[more]
Q9YVU8	5.496e-13	42.86	ORF MSV144 putative ubiquitin, similar to Neurospo...	[more]

BLAST of SMED30028520 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
uba52	3.688e-14	41.03	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
uba52	3.688e-14	41.03	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
rps27a	2.036e-13	41.56	ribosomal protein S27a [Source:NCBI gene;Acc:10304...	[more]
si:ch211-202a12.4	3.893e-13	41.56	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]
nedd8	1.715e-12	37.35	NEDD8 [Source:NCBI gene;Acc:103040682]	[more]

BLAST of SMED30028520 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4


Match Name	E-value	Identity	Description
UBB	2.650e-14	41.25	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]
ENSPMAT00000006254.1	2.726e-9	33.80	pep scaffold:Pmarinus_7.0:GL477433:3744:20801:-1 g...	[more]
ENSPMAT00000006261.1	1.296e-8	30.56	pep scaffold:Pmarinus_7.0:GL477433:28222:29567:1 g...	[more]
zfand4	8.401e-6	25.61	zinc finger, AN1-type domain 4 [Source:ZFIN;Acc:ZD...	[more]

BLAST of SMED30028520 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
RPL40B	2.629e-14	41.03	Ubiquitin-ribosomal 60S subunit protein L40B fusio...	[more]
RPL40A	2.629e-14	41.03	Ubiquitin-ribosomal 60S subunit protein L40A fusio...	[more]
UBI4	2.936e-13	41.56	Ubiquitin; becomes conjugated to proteins, marking...	[more]
RPS31	8.006e-11	40.58	Fusion protein cleaved to yield ribosomal protein ...	[more]
RUB1	3.373e-9	35.53	Ubiquitin-like protein with similarity to mammalia...	[more]

BLAST of SMED30028520 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO45561	1.131e-14	41.56	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32403	4.688e-14	41.56	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO48503	6.285e-14	41.56	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32547	1.504e-13	41.56	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO31255	1.814e-12	41.10	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of SMED30028520 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
uba52	5.188e-14	41.03	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
rps27a	1.466e-13	41.56	ribosomal protein S27a [Source:NCBI gene;Acc:10116...	[more]
rps27a	1.495e-13	41.56	ribosomal protein S27a [Source:NCBI gene;Acc:10116...	[more]
ubb	4.731e-13	41.56	ubiquitin C [Source:NCBI gene;Acc:101172100]	[more]
ENSORLT00000015052.2	4.927e-12	38.75	pep primary_assembly:ASM223467v1:12:2267197:226848...	[more]

BLAST of SMED30028520 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000004036.1	4.880e-57	98.89	SMESG000004036.1	[more]
SMESG000004032.1	1.061e-38	74.44	SMESG000004032.1	[more]
SMESG000048258.1	1.200e-15	45.45	SMESG000048258.1	[more]
SMESG000048258.1	1.254e-15	45.45	SMESG000048258.1	[more]
SMESG000048258.1	1.370e-15	45.45	SMESG000048258.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence

transcript sequence

>SMED30028520 ID=SMED30028520|Name=SMED30028520|organism=Schmidtea mediterranea sexual|type=transcript|length=565bp
TAAATGACAATATTAATTTATTTATACGTTATTGTTAGACCATAACATTT
TTAATAACATGAAACAAAACTATTTCAATCACTAATAAAACAATGAATAA
TTTTTATTTTTTAACACAAATTATAATCATTTGAAATAAAATTTCTTATT
TTCTTATTGTTTGCTTTAAAAAAGTTCTAAAAGAGAAAGTAAAATATAAA
AATATCTCAAATCTGTTCTTCGATAACATAAAATTTCTTGTTGACTATTG
AAATATGAATTTCTTCAAATTGACTATATTACGGAATACGCCACCTTTTA
AAATTAAACAAACATTTATAAAAGAACAGTCTTTAATGTCACATTCTTCA
ACAGTGTCATCATCATTGAGATATAGTCCAGAAAATATTAACCTTTGTTC
TATTACTTTAATGCCAGTTTTCTCTTCAACTTGCAATTTTAATGATTTAA
TGGTATCATTTTTTGACACTTGGAAACTCATTGATTTACCATCTAAATCT
TTAACAAATATTTGCATTATTTAAAAATCCGGATAAAATCATTTAAATAA
TTACATAATTCGATT

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0003116	parenchymal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR019956	Ubiquitin_dom
IPR000626	Ubiquitin-like_dom
IPR029071	Ubiquitin-like_domsf

Vocabulary: **molecular function**
Term	Definition
GO:0005515	protein binding

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 11..31 score: 27.58 coord: 32..52 score: 51.01
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 2.9E-19 score: 80.0
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..71 e-value: 7.5E-20 score: 70.5
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..76 score: 22.003
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 1..83 e-value: 1.9E-23 score: 83.8
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 2..80
None	No IPR available	PANTHER	PTHR10666:SF300	UBIQUITIN-60S RIBOSOMAL PROTEIN L40-2	coord: 2..80
None	No IPR available	CDD	cd17039	Ubl_ubiquitin_like	coord: 3..69 e-value: 6.33222E-17 score: 66.0806
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	SSF54236	Ubiquitin-like	coord: 1..76