replication factor C subunit 2
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30028415 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 11Note: Hover over icons to view figure legend
Homology
BLAST of replication factor C subunit 2 vs. Ensembl Human
Match: RFC2 (replication factor C subunit 2 [Source:HGNC Symbol;Acc:HGNC:9970]) HSP 1 Score: 337.035 bits (863), Expect = 1.954e-107 Identity = 155/209 (74.16%), Postives = 185/209 (88.52%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 H+ELPW+EKYRP+ L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+A+LELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D++IL RL+ +I+ E V YTDDGLEAIIFTAQGDMRQA+NN++ T Sbjct: 31 AGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQST 239 HSP 2 Score: 138.272 bits (347), Expect = 7.151e-35 Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 F GFG + S+NVFKVCDEPHPLL+K M+++CV + +EA+K L +L GYSPEDIIG IFRV K + E+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ + A Sbjct: 240 FSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQ-MAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMA 350
BLAST of replication factor C subunit 2 vs. Ensembl Human
Match: RFC2 (replication factor C subunit 2 [Source:HGNC Symbol;Acc:HGNC:9970]) HSP 1 Score: 267.314 bits (682), Expect = 1.495e-81 Identity = 129/209 (61.72%), Postives = 157/209 (75.12%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 H+ELPW+EKYRP+ L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+A+LELNASND SMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D++IL RL+ +I+ E V YTDDGLEAIIFTAQGDMRQA+NN++ T Sbjct: 31 AGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASND----------------------------------SMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQST 205 HSP 2 Score: 138.272 bits (347), Expect = 3.132e-35 Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 F GFG + S+NVFKVCDEPHPLL+K M+++CV + +EA+K L +L GYSPEDIIG IFRV K + E+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ + A Sbjct: 206 FSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQ-MAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMA 316
BLAST of replication factor C subunit 2 vs. Ensembl Human
Match: RFC2 (replication factor C subunit 2 [Source:HGNC Symbol;Acc:HGNC:9970]) HSP 1 Score: 209.534 bits (532), Expect = 3.660e-61 Identity = 100/132 (75.76%), Postives = 115/132 (87.12%), Query Frame = 3 Query: 279 SNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 S+ RGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D++IL RL+ +I+ E V YTDDGLEAIIFTAQGDMRQA+NN++ T Sbjct: 5 SSLRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQST 136 HSP 2 Score: 138.658 bits (348), Expect = 3.932e-36 Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 F GFG + S+NVFKVCDEPHPLL+K M+++CV + +EA+K L +L GYSPEDIIG IFRV K + E+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ + A Sbjct: 137 FSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQ-MAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMA 247
BLAST of replication factor C subunit 2 vs. Ensembl Human
Match: RFC4 (replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]) HSP 1 Score: 191.045 bits (484), Expect = 2.262e-53 Identity = 101/225 (44.89%), Postives = 145/225 (64.44%), Query Frame = 3 Query: 33 GENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKVN------LPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHKVT 686 GEN + +PW+EKYRP + ++ E + L+ + +LPNL+ GPPG+GKT++IL AR + G E ++ VLELNAS++RGI+VVR K+K+FA+ V+ P KI+ILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ LSD RLL+I K E+V +D+G+ ++ ++GD+R+AI ++ ++T Sbjct: 30 GENKKAKP--VPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLT 252
BLAST of replication factor C subunit 2 vs. Ensembl Human
Match: RFC4 (replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]) HSP 1 Score: 191.045 bits (484), Expect = 4.327e-53 Identity = 101/225 (44.89%), Postives = 145/225 (64.44%), Query Frame = 3 Query: 33 GENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKVN------LPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHKVT 686 GEN + +PW+EKYRP + ++ E + L+ + +LPNL+ GPPG+GKT++IL AR + G E ++ VLELNAS++RGI+VVR K+K+FA+ V+ P KI+ILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ LSD RLL+I K E+V +D+G+ ++ ++GD+R+AI ++ ++T Sbjct: 30 GENKKAKP--VPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLT 252
BLAST of replication factor C subunit 2 vs. Ensembl Celegans
Match: rfc-2 (RFC (DNA replication factor) family [Source:UniProtKB/TrEMBL;Acc:O44175]) HSP 1 Score: 303.138 bits (775), Expect = 3.651e-95 Identity = 137/203 (67.49%), Postives = 171/203 (84.24%), Query Frame = 3 Query: 66 PWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 PW+EKYRP VL+DIVGNE ++RL++ +GN+PN++++GPPG GKTTS+ LAR +LG+ K AVLELNAS++RGI+VVR++IK+FA+ KV LP+G HKIIILDE DSMT+GAQQALRRTMEMY+ TTRFA ACN S KIIEPIQSRCA+LRYTKLS ++L R+ E+ K E V Y D GLEAI+FTAQGDMRQA+NN++ T Sbjct: 11 PWVEKYRPKVLADIVGNENIVERLKVIGHEGNVPNIVLSGPPGCGKTTSVWALARELLGDKVKEAVLELNASDERGIDVVRHRIKTFAQTKVTLPEGRHKIIILDEADSMTDGAQQALRRTMEMYTKTTRFALACNQSEKIIEPIQSRCALLRYTKLSPVQLLTRVKEVAKAEKVNYDDGGLEAILFTAQGDMRQALNNLQAT 213 HSP 2 Score: 98.5969 bits (244), Expect = 4.798e-22 Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 1334 GFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKN---HDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCR 1651 + V +NV KVCDEPHP L+ ML C + KF EA K ++ G+S +DI+ +FRV K + E L++ +I++I HMRIV GLT+ LQL+ LI LCR Sbjct: 216 AYELVNKENVLKVCDEPHPDLMIKMLHYCTDRKFFEASKIIHEFHRLGFSSDDIVSTLFRVVKTVELSKNVSEQLRMEYIRQIAMCHMRIVQGLTSKLQLSRLIADLCR 324
BLAST of replication factor C subunit 2 vs. Ensembl Celegans
Match: F44B9.8 (Probable replication factor C subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:P34429]) HSP 1 Score: 179.489 bits (454), Expect = 2.065e-49 Identity = 93/213 (43.66%), Postives = 131/213 (61.50%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGET-YKNAVLELNASNDRGIEVVRNKIKSFARNK--------VNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 LPW+EKYRP L ++V +E +K L F + LP+L+ GPPG+GKTT++L AR M T + VLELNAS++RGI+VVRN I +FA+ K N K++ILDE D+MT+ AQ ALRR +E Y++ RF CN + I+ IQSRC R+ L I+ RL I++ E + T DG +A++ ++GDMR IN ++ T Sbjct: 29 LPWVEKYRPSKLDELVAHEQIVKTLTKFIENRTLPHLLFYGPPGTGKTTTVLAAARQMYSPTKMASMVLELNASDERGIDVVRNTIVNFAQTKGLQAFSTSSNTGTVPFKLVILDEADAMTKDAQNALRRVIEKYTDNVRFCIICNYLASIVPAIQSRCTRFRFAPLDQKLIVPRLEYIVETEQLKMTPDGKDALLIVSKGDMRTVINTLQST 241
BLAST of replication factor C subunit 2 vs. Ensembl Celegans
Match: rfc-4 (Replication factor C subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P53016]) HSP 1 Score: 154.066 bits (388), Expect = 6.110e-41 Identity = 83/207 (40.10%), Postives = 127/207 (61.35%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGET-YKNAVLELNASNDRGIEVVRNKIKSFARNKV---NLPDGMH-KIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVE 668 L W EKYRP L DI + + L+ + +LP+L+ GPPG+GKT++ L R + + + + VL+LNAS++RGI VVR KI+SF+++ + + D + KIIILDE D+MT AQ A+RR +E +S TTRF CN S++I P+ SRCA R+ L + RL I E +DD L+ ++ ++GD+R+A+ ++ Sbjct: 15 LTWTEKYRPKTLDDIAYQDEVVTMLKGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFPKNIFHDRVLDLNASDERGIAVVRQKIQSFSKSSLGHSHREDVLKLKIIILDEVDAMTREAQAAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKSLPAEIQVQRLRTICDAEGTPMSDDELKQVMEYSEGDLRRAVCTLQ 221
BLAST of replication factor C subunit 2 vs. Ensembl Celegans
Match: rfc-3 (RFC (DNA replication factor) family [Source:UniProtKB/TrEMBL;Acc:Q18547]) HSP 1 Score: 111.694 bits (278), Expect = 2.499e-26 Identity = 70/229 (30.57%), Postives = 117/229 (51.09%), Query Frame = 3 Query: 69 WLEKYRPLVLSDIVGNEGTIKRLE-----IFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-------------ETYKNAVLELN-ASNDRGIE------------VVRNKIKSFARNKV--NLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAI 656 W++KYRP D++G +G +E F +P+L+ GP G+GK T I CL R + G + N LE+ S++ IE VV++ +K A+ + K+++L E DS+T AQ LRRTME Y+N + +C S+IIEP+QSRC ++ +D ++ L ++I+ ES + ++ L+ I+ ++G++R+AI Sbjct: 4 WVDKYRP---KDLLGKDGVDYHIEQANHLKFLSADCMPHLLFCGPSGAGKKTRIKCLLRELYGVGVEKTQLIMKSFTSPSNKKLEIQTVSSNYHIEMTPSDVGIYDRVVVQDLVKEMAQTSQIESTSQRSFKVVVLCEADSLTRDAQHGLRRTMEKYANNCKIVLSCESLSRIIEPLQSRCIIINVPAPTDEDVTKVLRKVIERESFLLPENVLQKIVEKSEGNLRRAI 229
BLAST of replication factor C subunit 2 vs. Ensembl Fly
Match: RfC4 (gene:FBgn0260985 transcript:FBtr0073264) HSP 1 Score: 322.398 bits (825), Expect = 1.689e-102 Identity = 147/205 (71.71%), Postives = 177/205 (86.34%), Query Frame = 3 Query: 60 ELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 LPW+EKYRP+ +IVGNE T+ RL +F+ QGN PN+IIAGPPG GKTT+I CLAR +LG++YK AVLELNASN+RGI+VVRNKIK FA+ KV LP G HKI+ILDE DSMTEGAQQALRRTME+YS+TTRFA ACN S KIIEPIQSRCAMLR+TKLSD+++LA+L+E+ K E + YT+DGLEAI+FTAQGDMRQ +NN++ T Sbjct: 15 HLPWIEKYRPVKFKEIVGNEDTVARLSVFATQGNAPNIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPRGRHKIVILDEADSMTEGAQQALRRTMEIYSSTTRFALACNTSEKIIEPIQSRCAMLRFTKLSDAQVLAKLIEVAKWEKLNYTEDGLEAIVFTAQGDMRQGLNNLQST 219 HSP 2 Score: 122.865 bits (307), Expect = 4.298e-30 Identity = 58/109 (53.21%), Postives = 78/109 (71.56%), Query Frame = 2 Query: 1331 QGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRAS 1657 QGFG +T++NVFKVCDEPHP L++ M+ +C + ++A+K L L GYSPEDII IFRV K + I E LKL FI+EIG HM+I+DG+ + LQL L+ +LC A+ Sbjct: 221 QGFGDITAENVFKVCDEPHPKLLEEMIHHCAANDIHKAYKILAKLWKLGYSPEDIIANIFRVCKRIN-IDEHLKLDFIREIGITHMKIIDGINSLLQLTALLAKLCIAA 328
BLAST of replication factor C subunit 2 vs. Ensembl Fly
Match: CG8142 (gene:FBgn0030871 transcript:FBtr0074472) HSP 1 Score: 190.66 bits (483), Expect = 1.777e-53 Identity = 95/212 (44.81%), Postives = 139/212 (65.57%), Query Frame = 3 Query: 66 PWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVN--LPDGM----HKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHKV 683 PW+EKYRP + D+V + L + G+LPN+++ GPPG+GKT++IL +R + G+ +K+ +LELNAS++RGI VVR KIK+F++ + PDG KIIILDE DSMT AQ ALRRTME S +TRF CN S+II PI SRC+ R+ L + +++ RL I +ME V DD ++I+ + GD+R+AI ++ +++ Sbjct: 31 PWVEKYRPRNVDDVVEQSEVVAVLRKCVEGGDLPNMLLYGPPGTGKTSTILAASRQIFGDMFKDRILELNASDERGINVVRTKIKNFSQLSASSVRPDGKPCPPFKIIILDEADSMTHAAQSALRRTMEKESRSTRFCLICNYVSRIIVPITSRCSKFRFKALGEDKVIDRLKYICEMEGVKIEDDAYKSIVKISGGDLRRAITTLQSCYRL 242
BLAST of replication factor C subunit 2 vs. Ensembl Fly
Match: RfC3 (gene:FBgn0032244 transcript:FBtr0080019) HSP 1 Score: 186.808 bits (473), Expect = 2.785e-52 Identity = 94/210 (44.76%), Postives = 136/210 (64.76%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 G +PW+EKYRP L D++ +E I + F + LP+L+ GPPG+GKT++IL AR + + +K+ VLELNAS+DRGI +VR +I +FA + D K+IILDE D+MT AQ ALRR +E Y++ RF CN SKII +QSRC R+ LS +++ RL +II+ E+V T+DG A++ A+GDMR+ +N ++ T Sbjct: 6 GPAVRMPWVEKYRPSGLDDLISHEEIISTITRFISRKQLPHLLFYGPPGTGKTSTILACARQLYSPQQFKSMVLELNASDDRGIGIVRGQILNFASTRTIFCDTF-KLIILDEADAMTNDAQNALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAVQITEDGKRALLTLAKGDMRKVLNVLQST 214
BLAST of replication factor C subunit 2 vs. Ensembl Fly
Match: RfC38 (gene:FBgn0028700 transcript:FBtr0080225) HSP 1 Score: 107.842 bits (268), Expect = 7.933e-25 Identity = 68/226 (30.09%), Postives = 115/226 (50.88%), Query Frame = 3 Query: 69 WLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG---ETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPD-GMH--------------------------KIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAI 656 W++KYRP LS + ++ + L KQ + P+L+ GP G+GK T I+CL R M G E ++ + ++R +EV+ + S +VN D GM+ K+I++ EGD +T+ AQ ALRRTME Y T R + N +S+II I+SRC +R +++EI++ L K E + + + ++ ++ ++R+A+ Sbjct: 4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVERLRSETMTFTTPSNRKVEVM--TVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISGQREFKVIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSILQNTCKREGLALPVELAKRVVDKSERNLRRAL 227
BLAST of replication factor C subunit 2 vs. Ensembl Fly
Match: RfC38 (gene:FBgn0028700 transcript:FBtr0344786) HSP 1 Score: 107.842 bits (268), Expect = 7.933e-25 Identity = 68/226 (30.09%), Postives = 115/226 (50.88%), Query Frame = 3 Query: 69 WLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG---ETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPD-GMH--------------------------KIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAI 656 W++KYRP LS + ++ + L KQ + P+L+ GP G+GK T I+CL R M G E ++ + ++R +EV+ + S +VN D GM+ K+I++ EGD +T+ AQ ALRRTME Y T R + N +S+II I+SRC +R +++EI++ L K E + + + ++ ++ ++R+A+ Sbjct: 4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVERLRSETMTFTTPSNRKVEVM--TVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISGQREFKVIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSILQNTCKREGLALPVELAKRVVDKSERNLRRAL 227
BLAST of replication factor C subunit 2 vs. Ensembl Zebrafish
Match: rfc2 (replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]) HSP 1 Score: 326.635 bits (836), Expect = 3.862e-103 Identity = 151/207 (72.95%), Postives = 183/207 (88.41%), Query Frame = 3 Query: 57 FELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 +ELPW+EKYRPL L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRY+KL D +I+ RL E+++ E++ T+DGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 64 YELPWVEKYRPLKLNEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYSKLRDEQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTN 270 HSP 2 Score: 144.821 bits (364), Expect = 5.203e-37 Identity = 65/109 (59.63%), Postives = 85/109 (77.98%), Query Frame = 2 Query: 1334 GFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASA 1660 GFG + S+NVFKVCDEPHPLL+KSMLE+CV + +EA+K + L + GYSPEDIIG IFRV K + E+LKL +IKEIG HM++ +G+ + LQ+AGL+GRLCR +A Sbjct: 272 GFGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWSLGYSPEDIIGNIFRVCKTFQ-MAEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCRKTA 379
BLAST of replication factor C subunit 2 vs. Ensembl Zebrafish
Match: rfc5 (replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]) HSP 1 Score: 193.741 bits (491), Expect = 1.423e-54 Identity = 92/206 (44.66%), Postives = 138/206 (66.99%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGET-YKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 LPW+EKYRP L D++ ++ + ++ F + LP+L+ GPPG+GKT++IL AR + + + + VLELNAS+DRGI+VVR I SFA + G K++ILDE D+MT+ AQ ALRR +E ++ TRF CN SKII +QSRC R+ LS ++++ RL +I+ ES+ T DG++AI+ + GDMR+++N ++ TH Sbjct: 14 LPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLFYGPPGTGKTSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGF-KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQNQMIPRLEHVIQQESIDITPDGMKAIVTLSTGDMRRSLNILQSTH 218
BLAST of replication factor C subunit 2 vs. Ensembl Zebrafish
Match: rfc4 (replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]) HSP 1 Score: 175.252 bits (443), Expect = 2.179e-49 Identity = 92/194 (47.42%), Postives = 124/194 (63.92%), Query Frame = 3 Query: 45 EGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKV--NLPDGM----HKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDD 605 E +PW+EKYRP + ++ E + L+ + +LPNL+ GPPG+GKT++IL AR + G + Y+ VLELNAS++RGI+VVR K+K FA+ V PDG KIIILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ L++ R+LEI + E++ YT + Sbjct: 27 EKKQRAVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPDLYRQRVLELNASDERGIQVVREKVKRFAQLTVAGTRPDGKTCPPFKIIILDEADSMTSAAQAALRRTMEKESRTTRFCLICNYVSRIIEPLTSRCSKFRFKPLANDVQQERILEICRKENLKYTTE 220
BLAST of replication factor C subunit 2 vs. Ensembl Zebrafish
Match: rfc4 (replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]) HSP 1 Score: 175.252 bits (443), Expect = 2.179e-49 Identity = 92/194 (47.42%), Postives = 124/194 (63.92%), Query Frame = 3 Query: 45 EGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKV--NLPDGM----HKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDD 605 E +PW+EKYRP + ++ E + L+ + +LPNL+ GPPG+GKT++IL AR + G + Y+ VLELNAS++RGI+VVR K+K FA+ V PDG KIIILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ L++ R+LEI + E++ YT + Sbjct: 27 EKKQRAVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPDLYRQRVLELNASDERGIQVVREKVKRFAQLTVAGTRPDGKTCPPFKIIILDEADSMTSAAQAALRRTMEKESRTTRFCLICNYVSRIIEPLTSRCSKFRFKPLANDVQQERILEICRKENLKYTTE 220
BLAST of replication factor C subunit 2 vs. Ensembl Zebrafish
Match: rfc4 (replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]) HSP 1 Score: 179.104 bits (453), Expect = 3.388e-49 Identity = 96/210 (45.71%), Postives = 131/210 (62.38%), Query Frame = 3 Query: 45 EGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKV--NLPDGM----HKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQA 653 E +PW+EKYRP + ++ E + L+ + +LPNL+ GPPG+GKT++IL AR + G + Y+ VLELNAS++RGI+VVR K+K FA+ V PDG KIIILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ L++ R+LEI + E++ YT + ++ + Q DM A Sbjct: 27 EKKQRAVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPDLYRQRVLELNASDERGIQVVREKVKRFAQLTVAGTRPDGKTCPPFKIIILDEADSMTSAAQAALRRTMEKESRTTRFCLICNYVSRIIEPLTSRCSKFRFKPLANDVQQERILEICRKENLKYTTEIIQCLRQKQQLDMTAA 236
BLAST of replication factor C subunit 2 vs. Ensembl Xenopus
Match: prokr1 (prokineticin receptor 1 [Source:Xenbase;Acc:XB-GENE-920239]) HSP 1 Score: 338.961 bits (868), Expect = 1.117e-108 Identity = 155/206 (75.24%), Postives = 186/206 (90.29%), Query Frame = 3 Query: 57 FELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 +ELPW+EKYRPL LS+IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG T K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D+++LARL+++++ E V TDDGLEAI+FTAQGDMRQA+NN++ T Sbjct: 29 YELPWVEKYRPLKLSEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLARLMDVVEKERVQCTDDGLEAIVFTAQGDMRQALNNLQST 234 HSP 2 Score: 88.1965 bits (217), Expect = 3.315e-18 Identity = 50/111 (45.05%), Postives = 62/111 (55.86%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASA 1660 F GFG V S NVFKV + +L GYSPEDIIG IFRV K +PE+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ +A Sbjct: 235 FAGFGFVNSTNVFKV---------------------------VAHLWKLGYSPEDIIGNIFRVCKTFQ-MPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTA 317
BLAST of replication factor C subunit 2 vs. Ensembl Xenopus
Match: prokr1 (prokineticin receptor 1 [Source:Xenbase;Acc:XB-GENE-920239]) HSP 1 Score: 337.806 bits (865), Expect = 4.243e-108 Identity = 155/206 (75.24%), Postives = 186/206 (90.29%), Query Frame = 3 Query: 57 FELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 +ELPW+EKYRPL LS+IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG T K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D+++LARL+++++ E V TDDGLEAI+FTAQGDMRQA+NN++ T Sbjct: 30 YELPWVEKYRPLKLSEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLARLMDVVEKERVQCTDDGLEAIVFTAQGDMRQALNNLQST 235 HSP 2 Score: 105.145 bits (261), Expect = 8.861e-24 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIK 1567 F GFG V S NVFKVCDEPHPLL+K ML++CV + +EA+K + +L GYSPEDIIG IFRV K +PE+LKL FIK Sbjct: 236 FAGFGFVNSTNVFKVCDEPHPLLVKEMLQHCVNANIDEAYKVVAHLWKLGYSPEDIIGNIFRVCKTFQ-MPEYLKLEFIK 314
BLAST of replication factor C subunit 2 vs. Ensembl Xenopus
Match: prokr1 (prokineticin receptor 1 [Source:Xenbase;Acc:XB-GENE-920239]) HSP 1 Score: 338.191 bits (866), Expect = 6.855e-108 Identity = 155/206 (75.24%), Postives = 186/206 (90.29%), Query Frame = 3 Query: 57 FELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 +ELPW+EKYRPL LS+IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG T K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D+++LARL+++++ E V TDDGLEAI+FTAQGDMRQA+NN++ T Sbjct: 37 YELPWVEKYRPLKLSEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLARLMDVVEKERVQCTDDGLEAIVFTAQGDMRQALNNLQST 242 HSP 2 Score: 142.51 bits (358), Expect = 2.357e-36 Identity = 66/111 (59.46%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASA 1660 F GFG V S NVFKVCDEPHPLL+K ML++CV + +EA+K + +L GYSPEDIIG IFRV K +PE+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ +A Sbjct: 243 FAGFGFVNSTNVFKVCDEPHPLLVKEMLQHCVNANIDEAYKVVAHLWKLGYSPEDIIGNIFRVCKTFQ-MPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTA 352
BLAST of replication factor C subunit 2 vs. Ensembl Xenopus
Match: prokr1 (prokineticin receptor 1 [Source:Xenbase;Acc:XB-GENE-920239]) HSP 1 Score: 338.191 bits (866), Expect = 7.886e-108 Identity = 155/206 (75.24%), Postives = 186/206 (90.29%), Query Frame = 3 Query: 57 FELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 +ELPW+EKYRPL LS+IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG T K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D+++LARL+++++ E V TDDGLEAI+FTAQGDMRQA+NN++ T Sbjct: 39 YELPWVEKYRPLKLSEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLARLMDVVEKERVQCTDDGLEAIVFTAQGDMRQALNNLQST 244 HSP 2 Score: 142.895 bits (359), Expect = 1.833e-36 Identity = 66/111 (59.46%), Postives = 84/111 (75.68%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASA 1660 F GFG V S NVFKVCDEPHPLL+K ML++CV + +EA+K + +L GYSPEDIIG IFRV K +PE+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ +A Sbjct: 245 FAGFGFVNSTNVFKVCDEPHPLLVKEMLQHCVNANIDEAYKVVAHLWKLGYSPEDIIGNIFRVCKTFQ-MPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTA 354
BLAST of replication factor C subunit 2 vs. Ensembl Xenopus
Match: prokr1 (prokineticin receptor 1 [Source:Xenbase;Acc:XB-GENE-920239]) HSP 1 Score: 330.102 bits (845), Expect = 3.389e-105 Identity = 151/201 (75.12%), Postives = 180/201 (89.55%), Query Frame = 3 Query: 57 FELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAIN 659 +ELPW+EKYRPL LS+IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG T K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D+++LARL+++++ E V TDDGLEAI+FTAQGDMRQ + Sbjct: 29 YELPWVEKYRPLKLSEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLARLMDVVEKERVQCTDDGLEAIVFTAQGDMRQVCD 229 HSP 2 Score: 124.79 bits (312), Expect = 1.415e-30 Identity = 56/101 (55.45%), Postives = 77/101 (76.24%), Query Frame = 2 Query: 1358 NVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASA 1660 ++ +VCDEPHPLL+K ML++CV + +EA+K + +L GYSPEDIIG IFRV K +PE+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ +A Sbjct: 223 DMRQVCDEPHPLLVKEMLQHCVNANIDEAYKVVAHLWKLGYSPEDIIGNIFRVCKTFQ-MPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTA 322
BLAST of replication factor C subunit 2 vs. Ensembl Mouse
Match: Rfc2 (replication factor C (activator 1) 2 [Source:MGI Symbol;Acc:MGI:1341868]) HSP 1 Score: 340.117 bits (871), Expect = 7.899e-109 Identity = 156/209 (74.64%), Postives = 185/209 (88.52%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 H+ELPW+EKYRPL L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D+++L RL+ +I+ E V YTDDGLEAIIFTAQGDMRQA+NN++ T Sbjct: 26 AGHYELPWVEKYRPLKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLTRLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQST 234 HSP 2 Score: 138.272 bits (347), Expect = 4.808e-35 Identity = 62/112 (55.36%), Postives = 85/112 (75.89%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 F GFG + S+NVFKVCDEPHPLL+K M+++CV++ +EA+K L +L GYSPED+IG IFRV K + E+LKL FIKEIG HM++ +G+ + LQ+AGL+ RLC+ + A Sbjct: 235 FSGFGYINSENVFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKTFP-MAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMA 345
BLAST of replication factor C subunit 2 vs. Ensembl Mouse
Match: Rfc5 (replication factor C (activator 1) 5 [Source:MGI Symbol;Acc:MGI:1919401]) HSP 1 Score: 182.956 bits (463), Expect = 9.199e-51 Identity = 86/205 (41.95%), Postives = 138/205 (67.32%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGET-YKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 LPW+EKYRP L+D++ ++ + ++ F + LP+L++ GPPG+GKT++IL A+ + + + + VLELNAS+DRGI++VR I SFA + G K++ILDE D+MT+ AQ ALRR +E ++ TRF CN SKII +QSRC R+ L+ ++ RL +++ E+V ++DG++A++ + GDMR+A+N ++ T Sbjct: 19 LPWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGF-KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNILQST 222
BLAST of replication factor C subunit 2 vs. Ensembl Mouse
Match: Rfc4 (replication factor C (activator 1) 4 [Source:MGI Symbol;Acc:MGI:2146571]) HSP 1 Score: 179.489 bits (454), Expect = 3.301e-49 Identity = 94/215 (43.72%), Postives = 138/215 (64.19%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKVN------LPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHKVT 686 +PW+EKYRP + ++ + + L + +LPNL+ GPPG+GKT++IL AR + G E ++ VLELNAS++RGI+VVR K+K+FA+ V+ P KI+ILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ LSD RLL+I + E+V ++ + ++ ++GD+R+AI ++ ++T Sbjct: 38 VPWVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEKENVKIGNEEIAYLVKISEGDLRKAITFLQSATRLT 252
BLAST of replication factor C subunit 2 vs. Ensembl Mouse
Match: Rfc4 (replication factor C (activator 1) 4 [Source:MGI Symbol;Acc:MGI:2146571]) HSP 1 Score: 179.489 bits (454), Expect = 3.986e-49 Identity = 94/215 (43.72%), Postives = 138/215 (64.19%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKVN------LPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHKVT 686 +PW+EKYRP + ++ + + L + +LPNL+ GPPG+GKT++IL AR + G E ++ VLELNAS++RGI+VVR K+K+FA+ V+ P KI+ILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ LSD RLL+I + E+V ++ + ++ ++GD+R+AI ++ ++T Sbjct: 38 VPWVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEKENVKIGNEEIAYLVKISEGDLRKAITFLQSATRLT 252
BLAST of replication factor C subunit 2 vs. Ensembl Mouse
Match: Rfc4 (replication factor C (activator 1) 4 [Source:MGI Symbol;Acc:MGI:2146571]) HSP 1 Score: 167.933 bits (424), Expect = 1.215e-46 Identity = 88/183 (48.09%), Postives = 119/183 (65.03%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKVN------LPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESV 590 +PW+EKYRP + ++ + + L + +LPNL+ GPPG+GKT++IL AR + G E ++ VLELNAS++RGI+VVR K+K+FA+ V+ P KI+ILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ LSD RLL+I + E+V Sbjct: 38 VPWVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEKENV 220
BLAST of replication factor C subunit 2 vs. UniProt/SwissProt
Match: sp|P53033|RFC2_CHICK (Replication factor C subunit 2 OS=Gallus gallus OX=9031 GN=RFC2 PE=2 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 4.432e-110 Identity = 160/208 (76.92%), Postives = 187/208 (89.90%), Query Frame = 3 Query: 54 HFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 H+ELPW+EKYRPL L ++VGNE T+ RLE+F+K+GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+DS+ILARLL+I++ E V YTDDGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 38 HYELPWVEKYRPLKLCEVVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFTAQGDMRQALNNLQSTY 245 HSP 2 Score: 142.124 bits (357), Expect = 1.838e-35 Identity = 63/112 (56.25%), Postives = 86/112 (76.79%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 + GFG + S+NVFKVCDEPHPLL+K M+++C+ + +EA+K L +L GYSPED+IG IFRV K +PE+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ +AA Sbjct: 245 YSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGNIFRVCKTFQ-MPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAA 355
BLAST of replication factor C subunit 2 vs. UniProt/SwissProt
Match: sp|Q05B83|RFC2_BOVIN (Replication factor C subunit 2 OS=Bos taurus OX=9913 GN=RFC2 PE=2 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 2.590e-108 Identity = 158/210 (75.24%), Postives = 186/210 (88.57%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 H+ELPW+EKYRP+ L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D +ILARLL +I+ E V YTDDGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 29 AGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDMQILARLLSVIEKEKVQYTDDGLEAIIFTAQGDMRQALNNLQSTY 238 HSP 2 Score: 137.502 bits (345), Expect = 6.037e-34 Identity = 63/112 (56.25%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 + GFG + S+NVFKVCDEPHPLL+K M+++CV + +EA+K L +L GYSPEDIIG IFRV K + E+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ + A Sbjct: 238 YSGFGFINSENVFKVCDEPHPLLVKEMIQHCVSADIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQ-MAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMA 348
BLAST of replication factor C subunit 2 vs. UniProt/SwissProt
Match: sp|Q9WUK4|RFC2_MOUSE (Replication factor C subunit 2 OS=Mus musculus OX=10090 GN=Rfc2 PE=1 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 5.525e-108 Identity = 156/209 (74.64%), Postives = 185/209 (88.52%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 H+ELPW+EKYRPL L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D+++L RL+ +I+ E V YTDDGLEAIIFTAQGDMRQA+NN++ T Sbjct: 26 AGHYELPWVEKYRPLKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLTRLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQST 234 HSP 2 Score: 138.272 bits (347), Expect = 3.363e-34 Identity = 62/112 (55.36%), Postives = 85/112 (75.89%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 F GFG + S+NVFKVCDEPHPLL+K M+++CV++ +EA+K L +L GYSPED+IG IFRV K + E+LKL FIKEIG HM++ +G+ + LQ+AGL+ RLC+ + A Sbjct: 235 FSGFGYINSENVFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKTFP-MAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMA 345
BLAST of replication factor C subunit 2 vs. UniProt/SwissProt
Match: sp|Q641W4|RFC2_RAT (Replication factor C subunit 2 OS=Rattus norvegicus OX=10116 GN=Rfc2 PE=2 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 7.918e-108 Identity = 155/207 (74.88%), Postives = 186/207 (89.86%), Query Frame = 3 Query: 54 HFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 H+ELPW+EKYRP+ L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D+++L+RL+ +I+ E V YTDDGLEAIIFTAQGDMRQA+NN++ T Sbjct: 28 HYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLSRLMNVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQST 234 HSP 2 Score: 138.272 bits (347), Expect = 2.973e-34 Identity = 62/112 (55.36%), Postives = 85/112 (75.89%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 F GFG + S+NVFKVCDEPHPLL+K M+++CV++ +EA+K L +L GYSPED+IG IFRV K + E+LKL FIKEIG HM++ +G+ + LQ+AGL+ RLC+ + A Sbjct: 235 FSGFGYINSENVFKVCDEPHPLLVKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVIGNIFRVCKTFP-MAEYLKLEFIKEIGYTHMKVAEGVNSLLQMAGLLARLCQKTMA 345
BLAST of replication factor C subunit 2 vs. UniProt/SwissProt
Match: sp|P35250|RFC2_HUMAN (Replication factor C subunit 2 OS=Homo sapiens OX=9606 GN=RFC2 PE=1 SV=3) HSP 1 Score: 337.035 bits (863), Expect = 9.384e-107 Identity = 155/209 (74.16%), Postives = 185/209 (88.52%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 H+ELPW+EKYRP+ L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+A+LELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D++IL RL+ +I+ E V YTDDGLEAIIFTAQGDMRQA+NN++ T Sbjct: 31 AGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQST 239 HSP 2 Score: 138.272 bits (347), Expect = 3.434e-34 Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 F GFG + S+NVFKVCDEPHPLL+K M+++CV + +EA+K L +L GYSPEDIIG IFRV K + E+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ + A Sbjct: 240 FSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQ-MAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMA 350
BLAST of replication factor C subunit 2 vs. TrEMBL
Match: I1ZI83 (Replication factor C subunit 2 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 465.692 bits (1197), Expect = 4.476e-154 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 3 Query: 3 VFQKTKNLLMGENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK 680 VFQKTKNLLMGENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK Sbjct: 2 VFQKTKNLLMGENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK 227 HSP 2 Score: 236.498 bits (602), Expect = 1.216e-66 Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 2 Query: 1322 LAFQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAAFGNK 1675 L +GFGSVTS+NVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRAS AFGNK Sbjct: 224 LTHKGFGSVTSENVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASVAFGNK 341
BLAST of replication factor C subunit 2 vs. TrEMBL
Match: G1MUA0 (Replication factor C subunit 2 OS=Meleagris gallopavo OX=9103 GN=RFC2 PE=4 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 2.338e-108 Identity = 161/210 (76.67%), Postives = 188/210 (89.52%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 G H+ELPW+EKYRPL L ++VGNE T+ RLE+F+K+GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+DS+ILARLL+I++ E V YTDDGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 37 GGHYELPWVEKYRPLKLCEVVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFTAQGDMRQALNNLQSTY 246 HSP 2 Score: 142.124 bits (357), Expect = 6.005e-33 Identity = 63/112 (56.25%), Postives = 86/112 (76.79%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 + GFG + S+NVFKVCDEPHPLL+K M+++C+ + +EA+K L +L GYSPED+IG IFRV K +PE+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ +AA Sbjct: 246 YSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGNIFRVCKTFQ-MPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAA 356
BLAST of replication factor C subunit 2 vs. TrEMBL
Match: A0A1D5PYS3 (Replication factor C subunit 2 OS=Gallus gallus OX=9031 GN=RFC2 PE=4 SV=1) HSP 1 Score: 346.28 bits (887), Expect = 4.688e-108 Identity = 160/208 (76.92%), Postives = 187/208 (89.90%), Query Frame = 3 Query: 54 HFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 H+ELPW+EKYRPL L ++VGNE T+ RLE+F+K+GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+DS+ILARLL+I++ E V YTDDGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 38 HYELPWVEKYRPLKLCEVVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFTAQGDMRQALNNLQSTY 245 HSP 2 Score: 89.3521 bits (220), Expect = 2.616e-15 Identity = 48/112 (42.86%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 + GFG + S+NVFK+ L +L GYSPED+IG IFRV K +PE+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ +AA Sbjct: 245 YSGFGFINSENVFKI---------------------------LAHLWRLGYSPEDVIGNIFRVCKTFQ-MPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAA 328
BLAST of replication factor C subunit 2 vs. TrEMBL
Match: A0A3L8S3B6 (AAA domain-containing protein OS=Chloebia gouldiae OX=44316 GN=DV515_00012792 PE=4 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 5.908e-108 Identity = 160/208 (76.92%), Postives = 188/208 (90.38%), Query Frame = 3 Query: 54 HFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 H+ELPW+EKYRP+ LS+IVGNE T+ RLE+F+K+GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+D++ILARLL+I++ E V YTDDGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 35 HYELPWVEKYRPMKLSEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILARLLKIVEKEDVAYTDDGLEAIIFTAQGDMRQALNNLQSTY 242 HSP 2 Score: 142.124 bits (357), Expect = 4.560e-33 Identity = 63/112 (56.25%), Postives = 86/112 (76.79%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 + GFG + S+NVFKVCDEPHPLL+K M+++C+ + +EA+K L +L GYSPED+IG IFRV K +PE+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ +AA Sbjct: 242 YSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGNIFRVCKTFQ-MPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAA 352
BLAST of replication factor C subunit 2 vs. TrEMBL
Match: U3IPH5 (Replication factor C subunit 2 OS=Anas platyrhynchos platyrhynchos OX=8840 GN=RFC2 PE=4 SV=2) HSP 1 Score: 345.895 bits (886), Expect = 1.194e-107 Identity = 160/208 (76.92%), Postives = 187/208 (89.90%), Query Frame = 3 Query: 54 HFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 H+ELPW+EKYRP+ L +IVGNE T+ RLE+F+K+GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRYTKL+DS+ILARLL+I++ E V YTDDGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 31 HYELPWVEKYRPMKLCEIVGNEDTVSRLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDSQILARLLKIVEKEDVPYTDDGLEAIIFTAQGDMRQALNNLQSTY 238 HSP 2 Score: 142.51 bits (358), Expect = 3.913e-33 Identity = 63/112 (56.25%), Postives = 86/112 (76.79%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 + GFG + S+NVFKVCDEPHPLL+K M+++C+ + +EA+K L +L GYSPED+IG IFRV K +PE+LKL FIKEIG HM+I +G+ + LQ+AGL+ RLC+ +AA Sbjct: 238 YSGFGFINSENVFKVCDEPHPLLVKEMIQHCINANIDEAYKILAHLWRLGYSPEDVIGNIFRVCKTFQ-MPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAA 348
BLAST of replication factor C subunit 2 vs. Ensembl Cavefish
Match: rfc2 (replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]) HSP 1 Score: 328.176 bits (840), Expect = 9.977e-104 Identity = 150/210 (71.43%), Postives = 185/210 (88.10%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 + +ELPW+EKYRP+ L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRY+KL D +I+ RL+E+++ E++ T+DGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 67 ASSYELPWVEKYRPMKLNEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYSKLRDEQIMMRLMEVVEKENLHTTNDGLEAIIFTAQGDMRQALNNLQSTN 276 HSP 2 Score: 144.05 bits (362), Expect = 9.027e-37 Identity = 66/110 (60.00%), Postives = 85/110 (77.27%), Query Frame = 2 Query: 1334 GFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 GFG + S+NVFKVCDEPHPLL+K+MLE+CV + +EA+K + L A GYSPEDIIG IFRV K + E+LKL +IKEIG HM+I +G+ + LQ+AGL+GRLC +AA Sbjct: 278 GFGFINSENVFKVCDEPHPLLVKNMLEHCVNANIDEAYKVIEQLWALGYSPEDIIGNIFRVCKTFQ-MAEYLKLEYIKEIGYTHMKIAEGVNSLLQMAGLLGRLCSKTAA 386
BLAST of replication factor C subunit 2 vs. Ensembl Cavefish
Match: rfc2 (replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]) HSP 1 Score: 327.02 bits (837), Expect = 3.860e-103 Identity = 150/210 (71.43%), Postives = 185/210 (88.10%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 + +ELPW+EKYRP+ L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRY+KL D +I+ RL+E+++ E++ T+DGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 67 ASSYELPWVEKYRPMKLNEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYSKLRDEQIMMRLMEVVEKENLHTTNDGLEAIIFTAQGDMRQALNNLQSTN 276 HSP 2 Score: 103.219 bits (256), Expect = 5.271e-23 Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 2 Query: 1334 GFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIK 1567 GFG + S+NVFKVCDEPHPLL+K+MLE+CV + +EA+K + L A GYSPEDIIG IFRV K + E+LKL +IK Sbjct: 278 GFGFINSENVFKVCDEPHPLLVKNMLEHCVNANIDEAYKVIEQLWALGYSPEDIIGNIFRVCKTFQ-MAEYLKLEYIK 354
BLAST of replication factor C subunit 2 vs. Ensembl Cavefish
Match: rfc2 (replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]) HSP 1 Score: 257.299 bits (656), Expect = 4.063e-78 Identity = 124/210 (59.05%), Postives = 157/210 (74.76%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 + +ELPW+EKYRP+ L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASND SMT+GAQQALRRTME+YS TTRFA ACN S KIIEPIQSRCA+LRY+KL D +I+ RL+E+++ E++ T+DGLEAIIFTAQGDMRQA+NN++ T+ Sbjct: 30 ASSYELPWVEKYRPMKLNEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASND----------------------------------SMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYSKLRDEQIMMRLMEVVEKENLHTTNDGLEAIIFTAQGDMRQALNNLQSTN 205 HSP 2 Score: 144.05 bits (362), Expect = 1.744e-37 Identity = 66/110 (60.00%), Postives = 85/110 (77.27%), Query Frame = 2 Query: 1334 GFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 GFG + S+NVFKVCDEPHPLL+K+MLE+CV + +EA+K + L A GYSPEDIIG IFRV K + E+LKL +IKEIG HM+I +G+ + LQ+AGL+GRLC +AA Sbjct: 207 GFGFINSENVFKVCDEPHPLLVKNMLEHCVNANIDEAYKVIEQLWALGYSPEDIIGNIFRVCKTFQ-MAEYLKLEYIKEIGYTHMKIAEGVNSLLQMAGLLGRLCSKTAA 315
BLAST of replication factor C subunit 2 vs. Ensembl Cavefish
Match: rfc4 (replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]) HSP 1 Score: 201.83 bits (512), Expect = 4.076e-57 Identity = 104/225 (46.22%), Postives = 149/225 (66.22%), Query Frame = 3 Query: 33 GENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKV--NLPDGMH----KIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHKVT 686 G + E +PW+EKYRP + ++ E + L+ + +LPNL+ GPPG+GKT++IL AR + G E Y+ VLELNAS++RGI+VVR K+K+FA+ V PDG H KIIILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ L++ RL+EI + E++ YT +G+EA++ ++GD+R+AI ++ T +++ Sbjct: 39 GSSGEKRQKPVPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKNFAQLTVAGKRPDGKHCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSRIIEPLTSRCSKFRFKPLANDIQRERLVEICEKENLKYTKEGIEALVKVSEGDLRKAITLLQSTARLS 263
BLAST of replication factor C subunit 2 vs. Ensembl Cavefish
Match: rfc5 (replication factor C subunit 5 [Source:NCBI gene;Acc:103039707]) HSP 1 Score: 189.119 bits (479), Expect = 5.159e-53 Identity = 89/206 (43.20%), Postives = 138/206 (66.99%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGET-YKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 LPW+EKYRP L D++ ++ + ++ F + LP+L+ GPPG+GKT++IL A+ + + + + VLELNAS+DRGI+VVR I SFA + G K++ILDE D+MT+ AQ ALRR +E ++ TRF CN SKII +QSRC R+ LS ++++ RL +I+ E++ + DG++AI+ + GDMR+++N ++ TH Sbjct: 14 LPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLFYGPPGTGKTSTILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGF-KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQNQMIPRLEHVIQQENIDISPDGMKAIVTLSTGDMRRSLNILQSTH 218
BLAST of replication factor C subunit 2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008618.1 (pep scaffold:Pmarinus_7.0:GL477502:54132:62470:-1 gene:ENSPMAG00000007794.1 transcript:ENSPMAT00000008618.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 327.405 bits (838), Expect = 1.740e-104 Identity = 153/210 (72.86%), Postives = 183/210 (87.14%), Query Frame = 3 Query: 57 FELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIA---GPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 +ELPW+EKYRPL L +IVGNE T+ RLE+F+++GN+PN+IIA GPPG+GKTTSILCLARA+LG ++AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS +TRFA ACN S KIIEPIQSRCA+LRY++L+DS++L+RLLE+ E V TDDGLEAIIFTAQGDMRQA+NN++ TH Sbjct: 46 YELPWVEKYRPLKLKEIVGNEETVSRLEVFAREGNVPNIIIAECQGPPGTGKTTSILCLARALLGPAVRDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPRGRHKIIILDEADSMTDGAQQALRRTMEIYSKSTRFALACNASDKIIEPIQSRCAVLRYSRLTDSQVLSRLLEVCDHECVQRTDDGLEAIIFTAQGDMRQALNNLQSTH 255 HSP 2 Score: 136.732 bits (343), Expect = 3.576e-35 Identity = 63/110 (57.27%), Postives = 83/110 (75.45%), Query Frame = 2 Query: 1334 GFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAA 1663 GFG V S+NVFKVCDEPHPLL+K M+ +CV ++A+K +++L GYSPEDIIG IFRV K + + E+LKL F+KEIG HMRIV+G+ + LQ+AGL+ RLC + A Sbjct: 257 GFGYVNSENVFKVCDEPHPLLVKEMIGHCVSGNIDQAYKIMSHLWKLGYSPEDIIGNIFRVCKTY-AMAEYLKLEFLKEIGLTHMRIVEGVNSLLQMAGLLARLCNKTVA 365
BLAST of replication factor C subunit 2 vs. Ensembl Sea Lamprey
Match: rfc5 (replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]) HSP 1 Score: 189.119 bits (479), Expect = 1.118e-53 Identity = 99/222 (44.59%), Postives = 140/222 (63.06%), Query Frame = 3 Query: 30 MGENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGET-YKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRR------TMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 MGE N LPW+EKYRP VL +++ ++ + ++ F + LP+L+ GPPG+GKT++IL AR + GE + VLELNAS+DRGI+VVR I SFA + G +K++ILDE D+MT+ AQ ALRR ME ++ TRF CN S+II +QSRC R+ LS ++ RLL +I E V TDDG+ A++ + GDMR+A+N ++ T Sbjct: 1 MGERAPRN---LPWVEKYRPRVLDELISHKDILTTIQKFISEDRLPHLLFYGPPGTGKTSTILACARQLYGEKEAASMVLELNASDDRGIDVVRGPILSFASTRTIFKKG-YKLVILDEADAMTQDAQNALRRGFHPPAVMEKFTENTRFCLICNYLSRIIPALQSRCTRFRFGPLSSDLMVPRLLHVIAEEQVDVTDDGMNALVTLSNGDMRRALNMLQST 218
BLAST of replication factor C subunit 2 vs. Ensembl Sea Lamprey
Match: rfc4 (replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]) HSP 1 Score: 158.688 bits (400), Expect = 1.791e-43 Identity = 82/176 (46.59%), Postives = 113/176 (64.20%), Query Frame = 3 Query: 162 LPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFAR------NKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVE 668 LPNL+ GPPG+GKT++IL AR + G E Y VLELNAS++RGI+VVR+K+K+FA+ K P KI++LDE DSMT AQ ALRRTME + TTRF CN S+IIEP+ SRC+ R+ LSD+ R+ + E + + L ++ A+GD+R+AI ++ Sbjct: 1 LPNLLFYGPPGTGKTSAILAAARDLFGPELYAQRVLELNASDERGIQVVRHKVKNFAQLTASSTRKDGSPCPPFKIVVLDEADSMTSAAQAALRRTMERETKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDAAQEQRVRHVCDQEGLKIEQEALTELVKVAEGDLRRAITMLQ 176
BLAST of replication factor C subunit 2 vs. Ensembl Sea Lamprey
Match: rfc3 (replication factor C (activator 1) 3 [Source:ZFIN;Acc:ZDB-GENE-020809-3]) HSP 1 Score: 103.99 bits (258), Expect = 3.506e-24 Identity = 68/225 (30.22%), Postives = 112/225 (49.78%), Query Frame = 3 Query: 69 WLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLE---LNASNDRGIE-----------------------VVRNKIKSFARNKVNLPDGMH---KIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAI 656 W++KYRP LS + ++ +L+ + G+ P+L++ GP G+GK T I+CL R + G + +E + + + IE VV+ IK+ A+++ L G K+++L E D +T+ AQ ALRRTME Y +T R CN +SK+I PI+SRC LR + E+ L + K E + + I + ++R+A+ Sbjct: 4 WVDKYRPTSLSKVDFHKEQAIQLKNLVQGGDFPHLLVYGPSGAGKKTRIMCLLRELYGAGVEKLRIEHQTVTTPSKKKIEISTIASNYHIEVTPSDAGNSDRVVVQELIKTVAQSQ-QLESGTQRDFKVVLLSEVDRLTKDAQHALRRTMEKYMSTCRLILMCNSTSKVIAPIRSRCLGLRVPAPTVDEVCQVLAIVCKKEGLSLPPELARRIAEKSNRNLRKAL 227
BLAST of replication factor C subunit 2 vs. Ensembl Sea Lamprey
Match: rfc1 (replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]) HSP 1 Score: 49.6766 bits (117), Expect = 3.499e-6 Identity = 57/266 (21.43%), Postives = 109/266 (40.98%), Query Frame = 3 Query: 12 KTKNLLMGENLEGNHFELPWLEKYRPLVLSDIVGNEG-------------------------------TIKRLEIFSKQ--GNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMH----------KIIILDEGDSMTEGAQQALRRTMEMYS----NTTRFAFACNDSSKI-IEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNV 665 +T++ G E L W+++YRP L +I+G +G ++ R K L +++GPPG GKTT+ + + LG ++ +ELNAS+ R ++N++ + RN ++ H ++++DE D M + ME+ + + CND + I + + C LR+ + +I ++ + E + ++ II A D+RQ ++N+ Sbjct: 480 ETRSPRKGSGPEVGGDSLLWVDRYRPQSLKNIIGQQGDQSPANKLLRWLRAWHSNHGGGSGGGRKAAPSVGRFRFGGKDDGSGLKAALLSGPPGVGKTTTAALVCQE-LGLSF----VELNASDRRSKNSMKNEVATCLRN-TSIEGFYHGSTAQTVSDRHVLLMDEVDGMAGNEDRG--GIMELIALIKQSKVPVICMCNDRNHPKIRSLANYCFDLRFPRPRVEQIKGAMMSVAFKEGLKIPPAAMQEIILAANQDIRQVLHNL 737
BLAST of replication factor C subunit 2 vs. Ensembl Yeast
Match: RFC4 (Subunit of heteropentameric Replication factor C (RF-C); which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005454]) HSP 1 Score: 318.161 bits (814), Expect = 7.104e-102 Identity = 145/206 (70.39%), Postives = 179/206 (86.89%), Query Frame = 3 Query: 57 FELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 +LPW+EKYRP VLSDIVGN+ TI RL+ +K GN+P++II+G PG GKTTS+ CLA +LG +Y + VLELNAS+DRGI+VVRN+IK FA+ K++LP G HKI+ILDE DSMT GAQQALRRTME+YSN+TRFAFACN S+KIIEP+QSRCA+LRY+KLSD ++L RLL+IIK+E V YT+DGLEAIIFTA+GDMRQAINN++ T Sbjct: 7 LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQST 212 HSP 2 Score: 91.2781 bits (225), Expect = 2.079e-20 Identity = 47/105 (44.76%), Postives = 68/105 (64.76%), Query Frame = 2 Query: 1334 GFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSL-NNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRL 1645 G G V +DNVFK+ D PHPL++K ML + S ++ + L +L GYS DI+ FRVTKN + E ++L IKEIG HMRI++G+ T+LQLA ++ ++ Sbjct: 215 GHGLVNADNVFKIVDSPHPLIVKKML---LASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGVGTYLQLASMLAKI 316
BLAST of replication factor C subunit 2 vs. Ensembl Yeast
Match: RFC2 (Subunit of heteropentameric Replication factor C (RF-C); RF-C is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon [Source:SGD;Acc:S000003829]) HSP 1 Score: 178.333 bits (451), Expect = 6.733e-50 Identity = 93/207 (44.93%), Postives = 129/207 (62.32%), Query Frame = 3 Query: 66 PWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKV---------NLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAI 656 PW+EKYRP L ++ + + L+ K NLP+++ GPPG+GKT++IL L + + G + K+ +LELNAS++RGI +VR K+K+FAR V N P +KIIILDE DSMT AQ ALRRTME YS TRF CN ++II+P+ SRC+ R+ L S + RL I + E+V D LE I+ + GD+R+ I Sbjct: 26 PWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGI 232
BLAST of replication factor C subunit 2 vs. Ensembl Yeast
Match: RFC3 (Subunit of heteropentameric Replication factor C (RF-C); which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005234]) HSP 1 Score: 177.178 bits (448), Expect = 1.147e-49 Identity = 87/199 (43.72%), Postives = 123/199 (61.81%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAIN 659 LPW+EKYRP L ++ G I + F +G LP+L+ GPPG+GKT++I+ LAR + G+ Y N VLELNAS+DRGI+VVRN+IK FA + G K+IILDE D+MT AQ ALRR +E Y+ TRF N + K+ + SRC R+ L I R+ ++ E + + + +A+I + GDMR+ +N Sbjct: 13 LPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGF-KLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSRCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLN 210
BLAST of replication factor C subunit 2 vs. Ensembl Yeast
Match: RFC5 (Subunit of heteropentameric Replication factor C (RF-C); RF-C is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon [Source:SGD;Acc:S000000291]) HSP 1 Score: 105.145 bits (261), Expect = 8.467e-25 Identity = 77/235 (32.77%), Postives = 118/235 (50.21%), Query Frame = 3 Query: 69 WLEKYRPLVLSDIVGNEGTIKRLEIFSKQG-NLPNLIIAGPPGSGKTTSILCLARAMLGE-------------TYKNAVLELNA---------------SNDRGI------EVVRNKIKSFARNKVNLPDGM---HKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESV-IYTDDGLEAIIFTAQGDMRQAI 656 W++KYRP L+ + NE L+ S Q +LP+L++ GP G+GK T + L ++ G T N LELN +NDR + EV + + F +K DG+ +K +I++E +S+T+ AQ ALRRTME YS R C+ S II PI+SRC ++R SDSEI L +++ E + + T D L+ I + G++R ++ Sbjct: 4 WVDKYRPKSLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSK----DGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSPIIAPIKSRCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSL 234
BLAST of replication factor C subunit 2 vs. Ensembl Yeast
Match: RFC1 (Subunit of heteropentameric Replication factor C (RF-C); RF-C is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon [Source:SGD;Acc:S000005743]) HSP 1 Score: 65.0846 bits (157), Expect = 4.034e-11 Identity = 59/228 (25.88%), Postives = 107/228 (46.93%), Query Frame = 3 Query: 69 WLEKYRPLVLSDIVGNEGTIKRLEIF------SKQGNLPN-----------LIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKS----------FARNK--VNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNT-TRFAFACNDSS-KIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAIN 659 W KY P L + GN+G++ +L+ + SK+ + + ++ GPPG GKTT+ +A+ + + +LE NAS+ R ++ +K+ F N+ NL +G H +II+DE D M+ G + + + + T T CN+ + + P C +++ + + I +RL+ I E + ++ +I T +GD+RQ IN Sbjct: 298 WTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYD-----ILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNL-NGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRGDIRQVIN 519
BLAST of replication factor C subunit 2 vs. Ensembl Nematostella
Match: EDO39385 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SA25]) HSP 1 Score: 329.331 bits (843), Expect = 1.509e-104 Identity = 154/207 (74.40%), Postives = 180/207 (86.96%), Query Frame = 3 Query: 57 FELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 FELPW+EKYRP L +IVGNE T+ RLE+F++QGN+PN+IIAGPPG+GKTTSILCLARA+LG + K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRRTME+YS TTRFA ACN S KIIE IQSRCA+LRYT+L+D+++L RLLEI E V DDGLEAIIFTA+GDMRQAINN++ T+ Sbjct: 51 FELPWVEKYRPTKLHEIVGNEETVSRLEVFAQQGNVPNIIIAGPPGTGKTTSILCLARALLGVSLKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNTSDKIIEAIQSRCAILRYTRLTDAQVLTRLLEICDKEQVPKVDDGLEAIIFTAEGDMRQAINNLQSTY 257 HSP 2 Score: 118.242 bits (295), Expect = 1.819e-28 Identity = 67/141 (47.52%), Postives = 80/141 (56.74%), Query Frame = 2 Query: 1328 FQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIK----------------------------------EIGEVHMRIVDGLTTHLQLAGLIGRLC 1648 + GFG V S+NVFKVCDEPHPLLIK ML++C +EA+K L++L GYSPEDII IFRV K I EFLKL FIK EIG HMRIV+G+ + LQL+GL+ RLC Sbjct: 257 YYGFGMVNSENVFKVCDEPHPLLIKEMLKSCSVGDIDEAYKVLSHLWNMGYSPEDIITNIFRVCKTAP-IAEFLKLEFIKVQKDEHLMKDIFVCINSPFIVQCRALGAGRIGEEEIGYTHMRIVEGVNSLLQLSGLLARLC 396
BLAST of replication factor C subunit 2 vs. Ensembl Nematostella
Match: EDO40950 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5R5]) HSP 1 Score: 189.119 bits (479), Expect = 3.405e-53 Identity = 101/220 (45.91%), Postives = 141/220 (64.09%), Query Frame = 3 Query: 48 GNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFAR--NKVNLPDGM----HKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLL-EIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHKV 683 G PW+EKYRP + D+ E + L+ + +LPNL+ GPPG+GKT++IL +AR + G E K VLELNAS++RGI+V+R+K+K+F++ + PDG K++ILDE DSMT AQ ALRRTME + TTRF CN S+IIEP+ SRC+ R+ LS SEIL R L EI E V D ++ +I ++GDMR+AI ++ H++ Sbjct: 26 GKQKSSPWVEKYRPKCVDDVAQQEEVVMVLKKSLEGADLPNLLFYGPPGTGKTSTILAVARELYGHEMLKQRVLELNASDERGIQVIRDKVKTFSQLSASASRPDGKPCPPFKLVILDEADSMTPSAQAALRRTMEKQTKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLS-SEILERRLKEICVKEEVNCEDKAIDEVIKISEGDMRKAITFLQSAHRL 244
BLAST of replication factor C subunit 2 vs. Ensembl Nematostella
Match: EDO41130 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S523]) HSP 1 Score: 185.267 bits (469), Expect = 3.744e-52 Identity = 92/205 (44.88%), Postives = 134/205 (65.37%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGE-TYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 LPW+EKYRP L D++ + I ++ F + LP+L+ GPPG+GKT++IL +A+ + + + + VLELNAS+DRGI +VR I SFA + G K++ILDE D+MT+ AQ ALRR ME ++ TRF CN +KII +QSRC R+ LS ++L RL +I+ E V TDDG ++++ AQGDMR+ +N ++ T Sbjct: 11 LPWVEKYRPKCLDDLISHTDIINTIQRFINEERLPHLLFYGPPGTGKTSTILAVAKQLYPDKQFGSMVLELNASDDRGIGIVRGDILSFASTRTIFKSGF-KLVILDEADAMTQDAQNALRRVMEKFTENTRFCLICNYLTKIIPALQSRCTRFRFGPLSVDQMLPRLEHVIESERVNVTDDGRKSLLRLAQGDMRKVLNILQST 214
BLAST of replication factor C subunit 2 vs. Ensembl Nematostella
Match: EDO40823 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S695]) HSP 1 Score: 97.8265 bits (242), Expect = 7.356e-22 Identity = 70/226 (30.97%), Postives = 109/226 (48.23%), Query Frame = 3 Query: 69 WLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAV------------------------LELNASNDRGIE---VVRNKIKSFARNKVNLPDGMH---KIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAI 656 W++KYRP L + ++ L+ G+ P+L++ GP G+GK T I C+ R + G + LE+NAS D GI VV+ +K+ A+ +L H K+++L E D +T+ AQ ALRRTME Y++T R CN +SK+I I+SRC +R S EI L + K E + + I + ++R+A+ Sbjct: 4 WVDKYRPTSLGKLDYHKDLAAHLKKLVHSGDFPHLLVYGPSGAGKKTRITCILRELYGSGVEKLKIEHHSFTTPSNKKVEISTIGSIFHLEVNAS-DVGIYDRVVVQELLKNTAQAH-SLELSAHRDFKVVVLTEVDRLTKDAQHALRRTMEKYTSTCRLILCCNSTSKVIPAIRSRCLGVRIPAPSVEEICQILQFVCKKEGLTIPSELSRRIAEKSGRNLRKAL 227
BLAST of replication factor C subunit 2 vs. Ensembl Nematostella
Match: EDO32627 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUL3]) HSP 1 Score: 65.4698 bits (158), Expect = 8.126e-11 Identity = 58/250 (23.20%), Postives = 115/250 (46.00%), Query Frame = 3 Query: 30 MGENLEGNHFELPWLEKYRPLVLSDIVGNEG---------------------TIKRLEIFSKQ---GNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRG--------IEVVRNK-IKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAF--ACND-SSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVEL 671 + +NL+ + L W++KY+P + I+G +G T+ + F+K +L +++GPPG GKTT+ + + LG +Y +E+NAS+ R E + NK + +F + + G+ ++++DE D M + + + T++ CND +S+ I + + C LR+++ +I ++ I E + ++ II A D+RQ ++N+ + Sbjct: 214 LSKNLQ--YLYLMWVDKYKPSGIKQIIGQQGDKSNMRKLLNWVRNWHKNRTKTLPKSSFFNKDTDGASLKAALLSGPPGVGKTTTATLVCQE-LGYSY----VEMNASDARSKKTLEQVVSESLSNKSMDAFVGSNLAAKSGLKHVLLMDEVDGMAGSEDRGGMQELISLIKTSKIPIICMCNDRNSQKIRSLANYCFDLRFSRPRVEQIKGAMMSIAYKEGIKIPPPAMDQIIQGANQDIRQVLHNMSM 456
BLAST of replication factor C subunit 2 vs. Ensembl Medaka
Match: rfc2 (replication factor C subunit 2 [Source:NCBI gene;Acc:101163395]) HSP 1 Score: 325.865 bits (834), Expect = 1.895e-103 Identity = 150/206 (72.82%), Postives = 181/206 (87.86%), Query Frame = 3 Query: 60 ELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTH 677 +LPW+EKYRPL L++IVGNE T+ RLE+F+++GN+PN+IIAGPPG+GKTTSILCLARA+LG K+AVLELNASNDRGI+VVRNKIK FA+ KV LP G HKIIILDE DSMT+GAQQALRR ME+YS TTRFA ACN S KIIEPIQSRCA+LRY KL+D +IL+RL E+I+ E + +DDGLEA+IFT+QGDMRQA+NN++ TH Sbjct: 36 DLPWVEKYRPLKLNEIVGNEETVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGSAMKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYAKLTDGQILSRLQEVIEKERLSVSDDGLEAVIFTSQGDMRQALNNLQSTH 241 HSP 2 Score: 139.813 bits (351), Expect = 1.141e-35 Identity = 64/109 (58.72%), Postives = 84/109 (77.06%), Query Frame = 2 Query: 1334 GFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASA 1660 GFG + S+NVFKVCDEPHPLL+KSML +CV+ +EA+K + +L GYSPEDIIG IFRV K + + E+LKL FIKEIG +MR+ +G+ + LQ+AGL+GRLC +A Sbjct: 243 GFGYINSENVFKVCDEPHPLLVKSMLGHCVDGNIDEAYKVVEHLWGLGYSPEDIIGNIFRVCKTYQ-MAEYLKLEFIKEIGYTNMRVAEGVNSLLQMAGLLGRLCSKTA 350
BLAST of replication factor C subunit 2 vs. Ensembl Medaka
Match: rfc4 (replication factor C subunit 4 [Source:NCBI gene;Acc:101172149]) HSP 1 Score: 192.2 bits (487), Expect = 4.658e-54 Identity = 100/214 (46.73%), Postives = 142/214 (66.36%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKV--NLPDGM----HKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHKV 683 +PW+EKYRP + ++ E + L+ + +LPNL+ GPPG+GKT++IL AR + G E Y+ VLELNAS++RGI+VVR K+K+FA+ V PDG KIIILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ L++ RLLEI + E++ YT + +EA++ ++GD+R+AI ++ ++ Sbjct: 31 VPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKTFAQLTVAGTRPDGKLCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISRIIEPLTSRCSKFRFKPLANRIQEERLLEICEKENLKYTRESIEALVQVSEGDLRKAITFLQCAARL 244
BLAST of replication factor C subunit 2 vs. Ensembl Medaka
Match: rfc4 (replication factor C subunit 4 [Source:NCBI gene;Acc:101172149]) HSP 1 Score: 192.2 bits (487), Expect = 6.494e-54 Identity = 100/214 (46.73%), Postives = 142/214 (66.36%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLG-ETYKNAVLELNASNDRGIEVVRNKIKSFARNKV--NLPDGM----HKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHKV 683 +PW+EKYRP + ++ E + L+ + +LPNL+ GPPG+GKT++IL AR + G E Y+ VLELNAS++RGI+VVR K+K+FA+ V PDG KIIILDE DSMT AQ ALRRTME S TTRF CN S+IIEP+ SRC+ R+ L++ RLLEI + E++ YT + +EA++ ++GD+R+AI ++ ++ Sbjct: 31 VPWVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKTFAQLTVAGTRPDGKLCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISRIIEPLTSRCSKFRFKPLANRIQEERLLEICEKENLKYTRESIEALVQVSEGDLRKAITFLQCAARL 244
BLAST of replication factor C subunit 2 vs. Ensembl Medaka
Match: rfc5 (replication factor C subunit 5 [Source:NCBI gene;Acc:101164811]) HSP 1 Score: 191.045 bits (484), Expect = 1.179e-53 Identity = 91/205 (44.39%), Postives = 138/205 (67.32%), Query Frame = 3 Query: 63 LPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGET-YKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 LPW+EKYRP L D++ + + ++ F ++ LP+L++ GPPG+GKT++IL AR + + + + VLELNAS+DRGI+VVR I SFA + G K++ILDE D+MT+ AQ ALRR +E ++ TRF CN SKII +QSRC R+ LS +++ RL +I+ ES+ T+DG++AI+ + GDMR+++N ++ T Sbjct: 14 LPWVEKYRPQKLDDLISHRDILSTIQRFVREDRLPHLLLYGPPGTGKTSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGF-KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSADQMIPRLRHVIQEESIDITEDGMKAIVTLSSGDMRRSLNVLQST 217
BLAST of replication factor C subunit 2 vs. Ensembl Medaka
Match: rfc5 (replication factor C subunit 5 [Source:NCBI gene;Acc:101164811]) HSP 1 Score: 181.03 bits (458), Expect = 2.566e-50 Identity = 88/202 (43.56%), Postives = 135/202 (66.83%), Query Frame = 3 Query: 72 LEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGET-YKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 +EKYRP L D++ + + ++ F ++ LP+L++ GPPG+GKT++IL AR + + + + VLELNAS+DRGI+VVR I SFA + G K++ILDE D+MT+ AQ ALRR +E ++ TRF CN SKII +QSRC R+ LS +++ RL +I+ ES+ T+DG++AI+ + GDMR+++N ++ T Sbjct: 2 VEKYRPQKLDDLISHRDILSTIQRFVREDRLPHLLLYGPPGTGKTSTILACARQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGF-KLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSADQMIPRLRHVIQEESIDITEDGMKAIVTLSSGDMRRSLNVLQST 202
BLAST of replication factor C subunit 2 vs. Planmine SMEST
Match: SMESG000041132.1 (SMESG000041132.1) HSP 1 Score: 447.588 bits (1150), Expect = 8.018e-151 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 3 Query: 30 MGENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK 680 MGENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK Sbjct: 1 MGENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK 217 HSP 2 Score: 238.039 bits (606), Expect = 6.942e-71 Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 2 Query: 1322 LAFQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASAAFGNK 1675 L +GFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRAS AFGNK Sbjct: 214 LTHKGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAFKSLNNLVAFGYSPEDIIGIIFRVTKNHDGIPEFLKLRFIKEIGEVHMRIVDGLTTHLQLAGLIGRLCRASVAFGNK 331
BLAST of replication factor C subunit 2 vs. Planmine SMEST
Match: SMESG000059207.1 (SMESG000059207.1) HSP 1 Score: 182.956 bits (463), Expect = 9.183e-51 Identity = 93/210 (44.29%), Postives = 128/210 (60.95%), Query Frame = 3 Query: 60 ELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVN-----------LPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAI 656 +PW+EKYRP + DI + + L+ + PN + GPPG+GKT++IL A+ + G Y++ VLELNAS++RGI V+R K+K F++N V+ +P K+IILDE DSMT AQ ALRRTME+ TTRF CN SKII+PI SRCA R+ L ++RLL I E+V T L ++ ++GD+RQAI Sbjct: 28 HIPWIEKYRPKTMDDIAHQDEVVAMLKKCISGSDFPNFLFYGPPGTGKTSTILAAAKDLFGLKYRDRVLELNASDERGISVIREKVKRFSQNSVSAKFRNGDDEKIIPS--FKLIILDEADSMTTAAQSALRRTMEVECKTTRFCLICNYISKIIDPITSRCAKFRFKSLDRDVAISRLLTICAAENVNITQAVLSKLVEMSEGDLRQAI 235
BLAST of replication factor C subunit 2 vs. Planmine SMEST
Match: SMESG000008724.1 (SMESG000008724.1) HSP 1 Score: 145.976 bits (367), Expect = 6.407e-39 Identity = 77/147 (52.38%), Postives = 99/147 (67.35%), Query Frame = 3 Query: 234 MLGETYKNAVLELNASNDRGIEVVRNKIKSFARNKVNLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELT 674 M + ++ VLELNAS+DRGIEVVR +I +FA N + + G K+IILDE D+MT+ AQ AL+R +E YS TRF CN +KII IQSRC R++ L +I RL+ II E V YT DGLEA+I + GDMRQAIN ++ T Sbjct: 1 MYDKHVRSLVLELNASDDRGIEVVRTEILNFASN-MTIQQGKSKLIILDEADAMTKDAQNALKRIIEKYSEFTRFCLICNYQNKIIPAIQSRCTRFRFSPLKSEQIQPRLIHIINEEKVNYTPDGLEALIRLSNGDMRQAINVLQCT 146
BLAST of replication factor C subunit 2 vs. Planmine SMEST
Match: SMESG000041142.1 (SMESG000041142.1) HSP 1 Score: 98.9821 bits (245), Expect = 3.578e-24 Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 3 Query: 525 YTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK 680 + +DSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK Sbjct: 4 FQYFTDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAINNVELTHK 55
BLAST of replication factor C subunit 2 vs. Planmine SMEST
Match: SMESG000020661.1 (SMESG000020661.1) HSP 1 Score: 100.138 bits (248), Expect = 1.276e-22 Identity = 66/224 (29.46%), Postives = 111/224 (49.55%), Query Frame = 3 Query: 69 WLEKYRPLVLSDIVGNEGTIKRLEIFSKQGNLPNLIIAGPPGSGKTTSILCLARAMLGE---------------TYKNAVLELNASN--------DRGIE---VVRNKIKSFARNKV--NLPDGMHKIIILDEGDSMTEGAQQALRRTMEMYSNTTRFAFACNDSSKIIEPIQSRCAMLRYTKLSDSEILARLLEIIKMESVIYTDDGLEAIIFTAQGDMRQAI 656 W +K++PL LS++ ++ R++ G+ P+L+I G GSGK T I C+ R + G+ ++K + L SN D GI ++++ IKS A ++ K+I++ E D +T AQ ALRRTME Y ++ R ++KII I+SRC +R S+ EI ++ + ES+I + I ++G++RQ + Sbjct: 4 WADKHKPLTLSELDYHKDQANRIQTLVTNGDFPHLLICGAAGSGKKTRIHCILRELYGQGVDKLRLEHQEFVTPSHKKIDINLVVSNYHIEVNPSDVGIHDRVIIQDLIKSSASTLQLDSIQQKEFKVIVMHEVDKLTPDAQHALRRTMEKYISSCRLILCAESTNKIIPAIRSRCLFIRVPSPSEKEIEKIIISTCQKESLIIPRALAKRIAEASKGNLRQGL 227 The following BLAST results are available for this feature:
BLAST of replication factor C subunit 2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of replication factor C subunit 2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 4
BLAST of replication factor C subunit 2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of replication factor C subunit 2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of replication factor C subunit 2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of replication factor C subunit 2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of replication factor C subunit 2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of replication factor C subunit 2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of replication factor C subunit 2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of replication factor C subunit 2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of replication factor C subunit 2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of replication factor C subunit 2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of replication factor C subunit 2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of replication factor C subunit 2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Cross References
External references for this transcript
Sequences
The following sequences are available for this feature:
transcript sequence >SMED30028415 ID=SMED30028415|Name=replication factor C subunit 2|organism=Schmidtea mediterranea sexual|type=transcript|length=2699bpback to top protein sequence of SMED30028415-orf-1 >SMED30028415-orf-1 ID=SMED30028415-orf-1|Name=SMED30028415-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=128bp MFINFDVPTLAFQGFGSVTSDNVFKVCDEPHPLLIKSMLENCVESKFNEAback to top protein sequence of SMED30028415-orf-2 >SMED30028415-orf-2 ID=SMED30028415-orf-2|Name=SMED30028415-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=232bp VFQKTKNLLMGENLEGNHFELPWLEKYRPLVLSDIVGNEGTIKRLEIFSKback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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