Eukaryotic translation initiation factor 3 subunit F

Overview
NameEukaryotic translation initiation factor 3 subunit F
Smed IDSMED30028361
Length (bp)924
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Eukaryotic translation initiation factor 3 subunit F (SMED30028361) t-SNE clustered cells

Violin plots show distribution of expression levels for Eukaryotic translation initiation factor 3 subunit F (SMED30028361) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Eukaryotic translation initiation factor 3 subunit F (SMED30028361) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Eukaryotic translation initiation factor 3 subunit F (SMED30028361) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30028361

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 1

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
muscle cellSMED30028361SMESG000005863.1 dd_Smed_v4_1642_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Human
Match: EIF3F (eukaryotic translation initiation factor 3 subunit F [Source:HGNC Symbol;Acc:HGNC:3275])

HSP 1 Score: 213.386 bits (542), Expect = 1.998e-66
Identity = 108/267 (40.45%), Postives = 173/267 (64.79%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLN 867
            + +HPV L SI D++ERR++  +RVIGTLLG  D   + VTN F+VPH E++ EV + +EF + M  L+ KV+P+E I+GWY+TG +IT HS L+HE YY +      + L VDTS+Q+  ++IKAY S  +GVP ++ GVMF P+ V+   +++ER  +DL+ +   +  R + +  DL QV   S+ + + ++ VL+Y   V++ ++  D  +GR L  +V  +PKI  +  E +++S+  DLLM TYL  L ++++ + EKL+N
Sbjct:   92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHE-YYSREA-PNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVN 356
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Human
Match: EIF3F (eukaryotic translation initiation factor 3 subunit F [Source:HGNC Symbol;Acc:HGNC:3275])

HSP 1 Score: 213.386 bits (542), Expect = 1.998e-66
Identity = 108/267 (40.45%), Postives = 173/267 (64.79%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLN 867
            + +HPV L SI D++ERR++  +RVIGTLLG  D   + VTN F+VPH E++ EV + +EF + M  L+ KV+P+E I+GWY+TG +IT HS L+HE YY +      + L VDTS+Q+  ++IKAY S  +GVP ++ GVMF P+ V+   +++ER  +DL+ +   +  R + +  DL QV   S+ + + ++ VL+Y   V++ ++  D  +GR L  +V  +PKI  +  E +++S+  DLLM TYL  L ++++ + EKL+N
Sbjct:   92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHE-YYSREA-PNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVN 356
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Human
Match: PSMD7 (proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565])

HSP 1 Score: 83.1889 bits (204), Expect = 1.298e-18
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            +V K+ +HP+ L S+ D F R   V +  RV+G LLG    + + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY S
Sbjct:    5 AVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LMKRYCPNSVLVIIDVKPKDLGLPTEAYIS 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Human
Match: PSMD7 (proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565])

HSP 1 Score: 81.2629 bits (199), Expect = 8.846e-18
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            +V K+ +HP+ L S+ D F R   V +  RV+G LLG    + + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY S
Sbjct:    5 AVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LMKRYCPNSVLVIIDVKPKDLGLPTEAYIS 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Human
Match: PSMD7 (proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565])

HSP 1 Score: 83.5741 bits (205), Expect = 1.059e-17
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            +V K+ +HP+ L S+ D F R   V +  RV+G LLG    + + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY S
Sbjct:    5 AVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LMKRYCPNSVLVIIDVKPKDLGLPTEAYIS 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Celegans
Match: eif-3.F (Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967])

HSP 1 Score: 147.132 bits (370), Expect = 5.390e-42
Identity = 90/295 (30.51%), Postives = 166/295 (56.27%), Query Frame = 1 
Query:   49 MESVVKINIHPVALFSITDAFERRSDVNSR------VIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKL-----CRKQC---VFLLVDTSMQ---SLDVAIKAYTSRPIGVPNKS--NGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKP-DPEIGRKLAQIVLAIP-KIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLNS 870
            M S + +N+HP    ++ D   RR+  +++       +GTL+GY +   I VTN FA+P  E++ ++ +  +FNQ MI    K +P+E+ VGW+ T S+IT  S L++ DYY ++      R++    V L +DT+     S  + ++AY     G+P  +  +  +F P+ V++ A   E  A+ L+++ L +++R   ++  L Q+   ++ ++E +  +L YV  V     KP D +IGR+L  IV A    +  EKL+ LV ++ +D +M +YL  L +T++++ E+L+++
Sbjct:    1 MASNLTVNVHPGVYMNVVDTHMRRTKSSAKNTGQEKCMGTLMGYYEKGSIQVTNCFAIPFNESNDDLEIDDQFNQQMISALKKTSPNEQPVGWFLTTSDIT-SSCLIYHDYYVRVITEASARRESPPIVVLTIDTTFSGDMSKRMPVRAYLRSKAGIPGAAGPHCAIFNPLRVELAAFPGELVAMQLIEKALDSRRREATLESGLEQLETSTAQMIEWLERMLHYVEDVNKNGEKPGDAQIGRQLMDIVTASSNNMQPEKLDTLVKNTLRDYVMVSYLAKLTQTQLQVHERLVSA 294
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Celegans
Match: rpn-8 (Proteasome Regulatory Particle, Non-ATPase-like [Source:UniProtKB/TrEMBL;Acc:O61792])

HSP 1 Score: 77.0258 bits (188), Expect = 9.458e-16
Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = 1 
Query:   58 VVKINIHPVALFSITDAFERRSDVNS--RVIGTLLG-YTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAY 447
            V K+ +HP+ L S+ D F R S   S  RV+G LLG     + + + NSFAVP  E+D +    F+ +++ ++M G+  KV   EKIVGWY TG ++  +   ++E   ++ C    V +++D   +++ +  +AY
Sbjct:   38 VNKVTVHPLVLLSVVDHFNRVSKTQSVKRVVGVLLGSMKKDKTLDIGNSFAVPFDEDDKDKSTWFLDMDYLESMYGMFYKVAAKEKIVGWYHTGPKLHKNDIAINEQ-LKRFC-PNPVLVIIDAEPKNIGLPTEAY 171
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Fly
Match: eIF3f1 (gene:FBgn0037270 transcript:FBtr0078892)

HSP 1 Score: 204.912 bits (520), Expect = 1.871e-64
Identity = 101/269 (37.55%), Postives = 169/269 (62.83%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKE--GLSNKKRHVYMKP--DLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKL 861
            + +HPV LF + DAFERR+  + RVIGTLLG  D   + VTN F VPH E+D +V   + +   M  LN KVN +E +VGW++TG+++T HS ++HE YY + C    V L VDTS+Q   + ++AY    +GVP   +G MF PI V++ ++E E + L L+++  G+S   R   + P  DL+Q+   S+ +  ++ ++L+YV  V+  ++ PD  +GR+L  ++ ++P +  E+  ++ +++ ++LL+   L  LIKT++++ EKL
Sbjct:    8 VRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHE-YYARECNNP-VHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRNLLLVITLSQLIKTQLQLNEKL 274
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Fly
Match: eIF3f2 (gene:FBgn0033069 transcript:FBtr0085990)

HSP 1 Score: 166.392 bits (420), Expect = 2.087e-49
Identity = 83/279 (29.75%), Postives = 166/279 (59.50%), Query Frame = 1 
Query:   37 RYFKMESVVKINIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTEN--DTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMK--PDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKL 861
            R F M +  K+ + P+  F I DA++RR   +++V+GTLLG      I +TN F VPH E+  +  + + + +   ++ LN    P+E+++GW+ TG  ++  + L+H+ Y ++ C  Q + LLVD ++++  ++ + Y +  +GVP  + G+MF  + ++I    S+  AL  +++    +      +  P+L+QV++ + ++   + +VL Y++ V+ ++ KPD  +GR L   + A+P +D++K   + +++ +D+LM   L T+IKT+++I+EKL
Sbjct:    4 RNFSMRA--KVYLKPLVFFQIIDAYDRRPKGDNQVMGTLLGRNKEGHIEITNCFTVPHKEHSENKRIDLDMAYASEVLELNMFAYPNERVLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRLYCAVEMGVPGGTKGLMFSLVPLEISNENSDLVALRCIEKQSQQQASKQMERFVPELAQVVDATRDMQHRLDLVLRYINDVLARKKKPDNVVGRSLYAALTAVPLLDSDKFRVMFNTNLRDMLMAITLSTMIKTQLEISEKL 280
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Fly
Match: Rpn8 (gene:FBgn0002787 transcript:FBtr0332921)

HSP 1 Score: 82.8037 bits (203), Expect = 9.503e-18
Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDI-HVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            SV K+ +HP+ L S+ D F R   + +  RV+G LLG   S+ +  V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E++VGWY TG ++  +   ++E     L R+ C   V +++D   + L +  +AY S
Sbjct:    7 SVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINE-----LVRRYCPNSVLVIIDAKPKDLGLPTEAYIS 143
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Fly
Match: Rpn8 (gene:FBgn0002787 transcript:FBtr0072290)

HSP 1 Score: 82.8037 bits (203), Expect = 9.503e-18
Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDI-HVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            SV K+ +HP+ L S+ D F R   + +  RV+G LLG   S+ +  V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E++VGWY TG ++  +   ++E     L R+ C   V +++D   + L +  +AY S
Sbjct:    7 SVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINE-----LVRRYCPNSVLVIIDAKPKDLGLPTEAYIS 143
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Fly
Match: Rpn8 (gene:FBgn0002787 transcript:FBtr0330237)

HSP 1 Score: 82.8037 bits (203), Expect = 1.308e-17
Identity = 49/142 (34.51%), Postives = 80/142 (56.34%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDI-HVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            SV K+ +HP+ L S+ D F R   + +  RV+G LLG   S+ +  V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E++VGWY TG ++  +   ++E     L R+ C   V +++D   + L +  +AY S
Sbjct:    7 SVNKVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINE-----LVRRYCPNSVLVIIDAKPKDLGLPTEAYIS 143
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Zebrafish
Match: eif3f (eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2])

HSP 1 Score: 224.942 bits (572), Expect = 3.771e-72
Identity = 115/266 (43.23%), Postives = 171/266 (64.29%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLL 864
            + IHPV L SI D++ERR++  SRVIGTLLG  D   + VTN F+VPH E++ EV + +EF + M  L+ KV+PSE IVGWY+TG +IT HS L+HE YY +      + L VDT++QS  + I+AY S  +GVP K+ GVMF P+ V+ I +++ER  +DL++   ++  R   +  DL+QV   +  V EM+  VL Y+  V++ ++  D  +GR L  +V  +PKI  E  E +++S+  DLLM TYL  L + ++ + EKL+
Sbjct:   17 VKIHPVVLASIVDSYERRNEGASRVIGTLLGTADKHSVDVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPSEVIVGWYATGFDITEHSVLIHE-YYSREA-PNPIHLTVDTALQSNKMNIRAYVSSQMGVPGKTVGVMFTPLSVKYIYYDTERIGVDLLQRTRASPGRTNGLTTDLAQVAGAAGRVQEMLATVLSYIEDVLSGKVMADNSVGRFLMDLVNKVPKIPAEDFENMLNSNINDLLMVTYLANLTQAQIALNEKLV 280
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Zebrafish
Match: psmd7 (proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541])

HSP 1 Score: 83.1889 bits (204), Expect = 8.617e-18
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            +V ++ +HP+ L S+ D F R   V S  RV+G LLG    + + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY S
Sbjct:    5 AVERVVVHPLVLLSVVDHFNRIGKVGSQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LMKQYCSNSVLVIIDVKPKDLGLPTEAYIS 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Zebrafish
Match: psmd7 (proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541])

HSP 1 Score: 82.4185 bits (202), Expect = 1.934e-17
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            +V ++ +HP+ L S+ D F R   V S  RV+G LLG    + + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY S
Sbjct:    5 AVERVVVHPLVLLSVVDHFNRIGKVGSQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LMKQYCSNSVLVIIDVKPKDLGLPTEAYIS 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Xenopus
Match: rabl3 (RAB, member of RAS oncogene family-like 3 [Source:Xenbase;Acc:XB-GENE-6258935])

HSP 1 Score: 231.106 bits (588), Expect = 4.945e-74
Identity = 113/267 (42.32%), Postives = 175/267 (65.54%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLN 867
            + +HPV L SI D++ERR++   RVIGTLLG TD   + VTN F+VPH E++ EV + +EF + M  L+ KV  +E+IVGWY+TG++IT HS L+HE Y ++      + + VDTS+Q   + IKAY S P+GVP K+ GVMF P+ VQ + +++ER  +DL+ +  +N  R + +  DL QV   ++ + + ++ VL+Y   V++ ++  D  +GR L  +V  +PKID E  E +++S+  DLLM TYL  L ++++ + EKLLN
Sbjct:   44 VKVHPVVLASIVDSYERRNEGAGRVIGTLLGTTDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVTSTEQIVGWYATGNDITEHSVLIHEYYSREATNP--IHMTVDTSLQGNRMNIKAYISSPMGVPGKTMGVMFTPLTVQYVYYDTERIGVDLITKTCANPNRSIGLTTDLQQVGVAANRLQDSLSTVLQYAEDVLSGKVTADNTVGRFLMDLVTQVPKIDPEDFEAMLNSNINDLLMVTYLANLTQSQIALNEKLLN 308
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Xenopus
Match: rabl3 (RAB, member of RAS oncogene family-like 3 [Source:Xenbase;Acc:XB-GENE-6258935])

HSP 1 Score: 221.09 bits (562), Expect = 1.421e-70
Identity = 109/258 (42.25%), Postives = 169/258 (65.50%), Query Frame = 1 
Query:   94 SITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLN 867
            SI D++ERR++   RVIGTLLG TD   + VTN F+VPH E++ EV + +EF + M  L+ KV  +E+IVGWY+TG++IT HS L+HE Y ++      + + VDTS+Q   + IKAY S P+GVP K+ GVMF P+ VQ + +++ER  +DL+ +  +N  R + +  DL QV   ++ + + ++ VL+Y   V++ ++  D  +GR L  +V  +PKID E  E +++S+  DLLM TYL  L ++++ + EKLLN
Sbjct:   18 SIVDSYERRNEGAGRVIGTLLGTTDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVTSTEQIVGWYATGNDITEHSVLIHEYYSREATNP--IHMTVDTSLQGNRMNIKAYISSPMGVPGKTMGVMFTPLTVQYVYYDTERIGVDLITKTCANPNRSIGLTTDLQQVGVAANRLQDSLSTVLQYAEDVLSGKVTADNTVGRFLMDLVTQVPKIDPEDFEAMLNSNINDLLMVTYLANLTQSQIALNEKLLN 273
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Xenopus
Match: nnt (nicotinamide nucleotide transhydrogenase [Source:Xenbase;Acc:XB-GENE-950270])

HSP 1 Score: 82.0333 bits (201), Expect = 3.404e-17
Identity = 47/141 (33.33%), Postives = 79/141 (56.03%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            +V ++ +HP+ L S+ D F R   V +  RV+G LLG    + + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY S
Sbjct:    5 AVDRVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWHKKILDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LMKRYCPNSVLVIIDVKPKDLGLPTEAYIS 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Xenopus
Match: cpe (carboxypeptidase E [Source:Xenbase;Acc:XB-GENE-952270])

HSP 1 Score: 70.4774 bits (171), Expect = 2.614e-13
Identity = 60/268 (22.39%), Postives = 123/268 (45.90%), Query Frame = 1 
Query:   61 VKINIHPVALFSITDAFERRSDVNSR---VIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCR--KQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEM----ITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKT 837
            V + +HP+ + +I+D + R      R   VIG L+G  + R+I V NSF +    N+ ++ ++ E+  T      +V    + +GWY+TG    P    VH    +++C   +  +FL ++   +  D+ +  Y S  I + N    ++   +   +   E+ER  +D +    +           +++ +    + ++M    + ++LEYV      E+  + EI R+ + +   +P + T+K +        D+ + +YL T+ KT
Sbjct:    9 VTVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSQINEEKITINKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVH----KQVCEIIESPLFLKLNPMTKHTDLPVSVYES-VIDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGE---NSTVAEHLIAQHSAIKMLHSRVRLILEYVRAAEAGEVPFNHEILREASALCHCLPVLSTDKFKMDFYDQCNDVGLMSYLGTITKT 268
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Xenopus
Match: cpe (carboxypeptidase E [Source:Xenbase;Acc:XB-GENE-952270])

HSP 1 Score: 70.4774 bits (171), Expect = 3.180e-13
Identity = 60/268 (22.39%), Postives = 123/268 (45.90%), Query Frame = 1 
Query:   61 VKINIHPVALFSITDAFERRSDVNSR---VIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCR--KQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEM----ITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKT 837
            V + +HP+ + +I+D + R      R   VIG L+G  + R+I V NSF +    N+ ++ ++ E+  T      +V    + +GWY+TG    P    VH    +++C   +  +FL ++   +  D+ +  Y S  I + N    ++   +   +   E+ER  +D +    +           +++ +    + ++M    + ++LEYV      E+  + EI R+ + +   +P + T+K +        D+ + +YL T+ KT
Sbjct:   22 VTVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSQINEEKITINKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVH----KQVCEIIESPLFLKLNPMTKHTDLPVSVYES-VIDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGE---NSTVAEHLIAQHSAIKMLHSRVRLILEYVRAAEAGEVPFNHEILREASALCHCLPVLSTDKFKMDFYDQCNDVGLMSYLGTITKT 281
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Mouse
Match: Eif3f (eukaryotic translation initiation factor 3, subunit F [Source:MGI Symbol;Acc:MGI:1913335])

HSP 1 Score: 211.46 bits (537), Expect = 7.295e-66
Identity = 107/267 (40.07%), Postives = 171/267 (64.04%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLN 867
            + +HPV L SI D++ERR++  +RVIGTLLG  D   + VTN F+VPH E++ EV + +EF + M  L+ KV+P+E I+GWY+TG +IT HS L+HE YY +      + L VDT +Q   ++IKAY S  +GVP ++ GVMF P+ V+   +++ER  +DL+ +   +  R + +  DL QV   S+ + + ++ VL+Y   V++ ++  D  +GR L  +V  +PKI  +  E +++S+  DLLM TYL  L ++++ + EKL+N
Sbjct:   96 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHE-YYSREA-PNPIHLTVDTGLQHGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVN 360
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Mouse
Match: Psmd7 (proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 [Source:MGI Symbol;Acc:MGI:1351511])

HSP 1 Score: 83.5741 bits (205), Expect = 6.835e-18
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            +V K+ +HP+ L S+ D F R   V +  RV+G LLG    + + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY S
Sbjct:    5 AVQKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LMKRYCPNSVLVIIDVKPKDLGLPTEAYIS 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Mouse
Match: Cops6 (COP9 signalosome subunit 6 [Source:MGI Symbol;Acc:MGI:1349439])

HSP 1 Score: 66.6254 bits (161), Expect = 4.064e-12
Identity = 59/268 (22.01%), Postives = 120/268 (44.78%), Query Frame = 1 
Query:   61 VKINIHPVALFSITDAFERRSDVNSR---VIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCR--KQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEM----ITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKT 837
            V + +HP+ + +I+D + R      R   VIG L+G  + R+I V NSF +     + ++ +  E+  T      +V    + +GWY+TG    P    VH    +++C   +  +FL ++   +  D+ +  + S  I + N    ++F  +   +   E+ER  +D +    +           +++ +    + ++M    + ++LEYV      E+  + EI R+   +   +P + T+K +        D+ +  YL T+ KT
Sbjct:    9 VSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVH----KQVCEIIESPLFLKLNPMTKHTDLPVSVFES-VIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGE---NSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKT 268
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Mouse
Match: Cops6 (COP9 signalosome subunit 6 [Source:MGI Symbol;Acc:MGI:1349439])

HSP 1 Score: 66.2402 bits (160), Expect = 5.970e-12
Identity = 59/268 (22.01%), Postives = 120/268 (44.78%), Query Frame = 1 
Query:   61 VKINIHPVALFSITDAFERRSDVNSR---VIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCR--KQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEM----ITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKT 837
            V + +HP+ + +I+D + R      R   VIG L+G  + R+I V NSF +     + ++ +  E+  T      +V    + +GWY+TG    P    VH    +++C   +  +FL ++   +  D+ +  + S  I + N    ++F  +   +   E+ER  +D +    +           +++ +    + ++M    + ++LEYV      E+  + EI R+   +   +P + T+K +        D+ +  YL T+ KT
Sbjct:   36 VSVALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVH----KQVCEIIESPLFLKLNPMTKHTDLPVSVFES-VIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGE---NSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKT 295
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. UniProt/SwissProt
Match: sp|Q4R5B8|EIF3F_MACFA (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9541 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.101e-66
Identity = 108/267 (40.45%), Postives = 173/267 (64.79%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLN 867
            + +HPV L SI D++ERR++  +RVIGTLLG  D   + VTN F+VPH E++ EV + +EF + M  L+ KV+P+E I+GWY+TG +IT HS L+HE YY +      + L VDTS+Q+  ++IKAY S  +GVP ++ GVMF P+ V+   +++ER  +DL+ +   +  R + +  DL QV   S+ + + ++ VL+Y   V++ ++  D  +GR L  +V  +PKI  +  E +++S+  DLLM TYL  L ++++ + EKL+N
Sbjct:   96 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHE-YYSREA-PNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVN 360
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. UniProt/SwissProt
Match: sp|A5A6I3|EIF3F_PANTR (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.549e-66
Identity = 108/267 (40.45%), Postives = 173/267 (64.79%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLN 867
            + +HPV L SI D++ERR++  +RVIGTLLG  D   + VTN F+VPH E++ EV + +EF + M  L+ KV+P+E I+GWY+TG +IT HS L+HE YY +      + L VDTS+Q+  ++IKAY S  +GVP ++ GVMF P+ V+   +++ER  +DL+ +   +  R + +  DL QV   S+ + + ++ VL+Y   V++ ++  D  +GR L  +V  +PKI  +  E +++S+  DLLM TYL  L ++++ + EKL+N
Sbjct:   96 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHE-YYSREA-PNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVN 360
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. UniProt/SwissProt
Match: sp|O00303|EIF3F_HUMAN (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=EIF3F PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.593e-66
Identity = 108/267 (40.45%), Postives = 173/267 (64.79%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLN 867
            + +HPV L SI D++ERR++  +RVIGTLLG  D   + VTN F+VPH E++ EV + +EF + M  L+ KV+P+E I+GWY+TG +IT HS L+HE YY +      + L VDTS+Q+  ++IKAY S  +GVP ++ GVMF P+ V+   +++ER  +DL+ +   +  R + +  DL QV   S+ + + ++ VL+Y   V++ ++  D  +GR L  +V  +PKI  +  E +++S+  DLLM TYL  L ++++ + EKL+N
Sbjct:   92 VRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHE-YYSREA-PNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALNEKLVN 356
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. UniProt/SwissProt
Match: sp|B4JGX4|EI3F1_DROGR (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila grimshawi OX=7222 GN=eIF3f1 PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.565e-65
Identity = 104/269 (38.66%), Postives = 168/269 (62.45%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKE--GLSNKKRHVYMKP--DLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKL 861
            + +HPV LF + DAFERR+  + RVIGTLLG  D   + VTN F VPH E+D +V   + +   M  LN KVN +E +VGW++TG+E+T HS ++HE YY + C    V L VDTS+Q   + ++AY    +GVP    G MF PI V++ ++E E + L L+++  G+S  +R   + P  DL+Q+   S  +  ++ ++L+YV  V+  ++ PD  +GR+L  ++ ++P +  E+  ++ +++ +DLLM   L  LIKT++++ EKL
Sbjct:    8 VRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNESVVGWWATGNEVTNHSSVIHE-YYARECNNP-VHLTVDTSLQGGRMGLRAYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAQRPKTVPPMLDLAQISEASQKLQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLNEKL 274
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. UniProt/SwissProt
Match: sp|B4LZ60|EI3F1_DROVI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila virilis OX=7244 GN=eIF3f1 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.920e-65
Identity = 104/269 (38.66%), Postives = 168/269 (62.45%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKE--GLSNKKRHVYMKP--DLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKL 861
            + +HPV LF + DAFERR+  + RVIGTLLG  D   + VTN F VPH E+D +V   + +   M  LN KVN +E +VGW++TG+E+T HS ++HE YY + C    V L VDTS+Q   + ++AY    +GVP    G MF PI V++ ++E E + L L+++  G+S   R   + P  DL+Q+   S+ +  ++ ++L+YV  V+  ++ PD  +GR+L  ++ ++P +  E+  ++ +++ +DLLM   L  LIKT++++ EKL
Sbjct:    8 VRVHPVVLFQVVDAFERRNADSHRVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNANESVVGWWATGNEVTNHSSVIHE-YYARECNNP-VHLTVDTSLQGGRMGLRAYVCIQLGVPGGKTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSLLELILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLNEKL 274
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. TrEMBL
Match: A0A1S3IIR1 (Eukaryotic translation initiation factor 3 subunit F OS=Lingula unguis OX=7574 GN=LOC106164137 PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 5.366e-76
Identity = 121/263 (46.01%), Postives = 176/263 (66.92%), Query Frame = 1 
Query:   73 IHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKL 861
            +HPV LFSI D++ERR++   RVIGTLLG  D   + VTN F VPH E++ EV + IEF + M  L+ KVNP E IVGWYSTGSE+T HS L+HE Y ++   K  + L VDT+++   + IKA+ S  +GVP K+ G +F PI V I  +E ER  ++ +++G +N KR V M  DL+QV N  +++ EM++V ++YV  V+  +I  D  +GR L  +V  +PKID E+ EE+++S+ KDLLM  YL  L +T++++ EK+
Sbjct:    9 VHPVVLFSIVDSYERRNEDARRVIGTLLGTLDKGAVEVTNCFTVPHNESEDEVAVDIEFARNMYELHKKVNPGEVIVGWYSTGSEVTEHSVLIHEYYARE--AKNPIHLTVDTTLRGNKMGIKAFLSSSMGVPGKTMGTVFTPIPVDIAFYEPERVGVEFVQQGKNNPKRTVSMTTDLNQVTNACNSMQEMLSVTIKYVDDVLAGKIPADATVGRFLMDLVNTVPKIDAEQFEEMLNSNMKDLLMVVYLSNLTRTQLQLNEKM 269
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. TrEMBL
Match: V4ACT1 (Eukaryotic translation initiation factor 3 subunit F OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_200059 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.869e-75
Identity = 122/271 (45.02%), Postives = 177/271 (65.31%), Query Frame = 1 
Query:   49 MESVVKINIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKL 861
            M S +   IHPV LF++ D+FERR++   RV+G+LLGY D   + +TN FAVPH E++ EV + IE+ + M  L  KVN SE IVGWYSTGSE++ HS L+HE YY + C K  + L VDTS+++  +  KAY S PIGVP K+ G MF P+ V+ I++E E+  ++ ++EG  N KR V M+ DL+ V      + EM++ V+ YV  V+  + K D  IGR L  +V  +P+ID E+ + +++S+ KDLLM  YL   ++T+M I EK+
Sbjct:    1 MSSNLVCRIHPVVLFTVIDSFERRNEDARRVVGSLLGYYDKGAVEITNCFAVPHNESEQEVALDIEYAREMFELYKKVNSSEVIVGWYSTGSEVSGHSVLIHE-YYSREC-KTPIHLTVDTSLKNGKMGTKAYVSTPIGVPTKTTGTMFTPVPVEYISYEPEKVGVNHLQEGKVNTKRTVSMESDLAHVETACHRLQEMLSTVINYVDDVLAGKAKTDNTIGRFLMNLVNEVPQIDIEEFDTMLNSNMKDLLMVVYLANFVRTQMAIHEKI 269
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. TrEMBL
Match: K1QTW6 (Eukaryotic translation initiation factor 3 subunit F OS=Crassostrea gigas OX=29159 GN=CGI_10023726 PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.005e-74
Identity = 123/265 (46.42%), Postives = 177/265 (66.79%), Query Frame = 1 
Query:   73 IHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEG--LSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKL 861
            +HPV LFSI D+FERR++   RVIGTLLG  D   + VTN F VPH E++ EV   +E+ + M  L+ KVNP+E IVGWYSTGS+++ HS L+HE Y ++   K  V + VDT ++   + +K Y S  IGVP K+ G MF P++V+I  +E E+  +DL+++G  + N KR V M  DL+QV    SN+ E +T+VLEYV +V+  +I+PD  IGR L  +V  +PKI+ E+ E +++S+ KDLLM  YL  L +T++ + EKL
Sbjct:    9 VHPVVLFSIIDSFERRNEDARRVIGTLLGSFDKGVVDVTNCFCVPHNESEDEVAADLEYARNMYELHKKVNPAEIIVGWYSTGSDVSEHSVLIHEYYTRE--AKNPVHVTVDTGLKGSKMDVKCYVSANIGVPGKTVGCMFTPVQVEINTYEPEKVGVDLIQQGKSIGNNKRTVSMVSDLTQVERACSNLQEKLTLVLEYVEEVLANKIQPDTSIGRYLLDLVNNVPKIEPEEFETMLNSNMKDLLMVVYLANLTRTQLALNEKL 271
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. TrEMBL
Match: T1JB03 (Eukaryotic translation initiation factor 3 subunit F OS=Strigamia maritima OX=126957 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 9.951e-74
Identity = 116/265 (43.77%), Postives = 175/265 (66.04%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKL 861
            + +HPV LFSI D +ERR+D  SRVIGTLLG  D   + VTN F+VPHTE + EV + +EF + M  L+ KVNP+E I+GWY+TG+EIT  S L+HE Y ++    Q + + VDT++Q+  + +KAY S  +G+P K+NG MF P  V+II +ESE   ++++ +G SN KR V    DL QV N +  +++ + +V+ YV  ++  ++  D  IGR L  +V ++P+ID  + E ++++  KDLLM  YL  L +T++ +TEKL
Sbjct:    7 VRVHPVVLFSIVDFYERRNDGASRVIGTLLGNHDKGAVEVTNCFSVPHTETEDEVAIDLEFAKNMYELHKKVNPNELILGWYATGNEITSQSLLIHEYYARE--TNQPIHVTVDTTLQNNGIGVKAYISTAMGIPGKTNGTMFTPYPVEIIGYESEYVGVNVIHKGKSNAKRTVESTSDLEQVRNANKQIMDNLEIVVSYVEDILAGKVPSDNNIGRSLLNLVHSVPQIDPAEFEAMLNNQMKDLLMVLYLSQLTRTQLTVTEKL 269
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. TrEMBL
Match: A0A5J4NLY6 (Translation initiation factor 3 subunit F OS=Paragonimus westermani OX=34504 GN=DEA37_0001314 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 1.171e-73
Identity = 118/272 (43.38%), Postives = 176/272 (64.71%), Query Frame = 1 
Query:   49 MESVVKINIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLD-VAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLS----QVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKI 849
            MES   + IHP+ L SI DA+ERR + + RVIGTLLG      I VTN + VPH E    V M  EF + M  L   +N +++IVGWY+TGSE+T H K++H+DYY +      +FLLVDTS+   D + +KAY SRP+G+P  + G++FVP++V+I  + +ER A+D+M   ++ K +   ++P+L      +  +S ++  M+  V+ YV  V+N +   DP IGR +AQ++L+IPK+D   L+ L++SS KDLLM TYL  LI+T +K+
Sbjct:    1 MESGATVRIHPIVLASIVDAYERRVENSERVIGTLLGSVGKGMIEVTNCYCVPHEETSVAVSMDFEFGKNMYQLERLINRNQRIVGWYATGSEMTEHFKVIHQDYYMQSVNVDVLFLLVDTSLAMGDRMGLKAYLSRPVGIPGGTRGIIFVPLDVEIEFYNAERCAVDMMASAVNPKSK---LRPELGDDMLHLFQMSQHLTTMLEQVIAYVDDVLNGKRPADPNIGRAIAQLILSIPKLDPAHLDTLINSSYKDLLMITYLTNLIRTHLKL 269
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Cavefish
Match: eif3f (eukaryotic translation initiation factor 3 subunit F [Source:NCBI gene;Acc:103028840])

HSP 1 Score: 226.483 bits (576), Expect = 7.177e-73
Identity = 113/266 (42.48%), Postives = 174/266 (65.41%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLL 864
            + IHPV L SI D++ERR++  SRVIGTLLG  D   + VTN F+VPH E++ EV + +EF + M  L+ KV+PSE I+GWY+TG +IT HS L+HE YY +  +   + L VDT++QS  + I+AY S  +GVP K+ GVMF P+ V+ + +++ER  +DL++   ++  R   +  DL+QV + +  + EM+T VL Y+  V++ ++  D  +GR L  +V  +PKI  E  E +++S+  DLLM TYL  L + ++ + EKL+
Sbjct:    8 VKIHPVVLASIADSYERRNEGASRVIGTLLGTIDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPSEVIIGWYATGYDITEHSVLIHE-YYSREAQNP-IHLTVDTALQSNKMNIRAYVSAQMGVPGKTVGVMFTPLTVKYVYYDTERIGVDLLQRTRASPNRTNGLTSDLAQVGSAAGRIQEMLTTVLAYIEDVLSGKVMADNSVGRYLMDLVNKVPKIPAEDFESMLNSNINDLLMVTYLANLTQAQIALNEKLV 271
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Cavefish
Match: psmd7 (proteasome 26S subunit, non-ATPase 7 [Source:NCBI gene;Acc:103042519])

HSP 1 Score: 84.3445 bits (207), Expect = 3.483e-18
Identity = 49/141 (34.75%), Postives = 79/141 (56.03%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            SV ++ +HP+ L S+ D F R   V S  RV+G LLG    + + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY S
Sbjct:    5 SVERVVVHPLVLLSVVDHFNRIGKVGSQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LMKQYCSNSVLVIIDVKPKDLGLPTEAYIS 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Cavefish
Match: COPS6 (COP9 signalosome subunit 6 [Source:HGNC Symbol;Acc:HGNC:21749])

HSP 1 Score: 66.6254 bits (161), Expect = 3.475e-12
Identity = 60/268 (22.39%), Postives = 120/268 (44.78%), Query Frame = 1 
Query:   61 VKINIHPVALFSITDAFERRSDVNSR---VIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCR--KQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEM----ITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKT 837
            V + +HP+ + +I+D + R      R   VIG L+G  + R+I V NSF +     D  + +  E+  T      +V    + +GWY+TG    P    +H   ++++C   +  +FL ++   +  D+ +  + S  I + N    ++F  +   +   E+ER  +D +    +           +++ +    + ++M    + ++LEYV  V   E+  + EI R+   +   +P + T K +        D+ +  YL T+ KT
Sbjct:    9 VSVALHPLVILNISDHWIRLRSQEGRAMQVIGALIGKQEGRNIEVMNSFELLFHTTDERIHIDKEYYYTKEEQFKQVFKDMEFLGWYTTGG--PPDQSDIH--IHKQVCEIIESPLFLKLNPMTKHTDLPVSVFES-VIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGTGE---NSTVAEHLIAQHSAIKMLHSRVKLILEYVKAVEAGEVPFNHEILREANALCHRLPVLSTLKFKTDFYDQCNDVGLMAYLGTITKT 268
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Sea Lamprey
Match: eif3f (eukaryotic translation initiation factor 3, subunit F [Source:ZFIN;Acc:ZDB-GENE-100215-2])

HSP 1 Score: 231.106 bits (588), Expect = 3.720e-75
Identity = 112/266 (42.11%), Postives = 179/266 (67.29%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLL 864
            + IHPV LFS+ D++ERR++   RVIGTLLG  D +++ VTN F+VPH E++ EV + +EF + M  L+ KV P+E+IVGWY+TG +IT HS L+HE YY +   +  + L +DT+++  +++IKAY S  +G P K+ GVMF P+ V+   ++ ER  +++++   SN KR V M  +L+QV   ++ + +M+T+VL+YV  V++ ++ PD  +GR L  +V  +PK+  E  E +++S+  DLLM TYL  L K ++ + EKL+
Sbjct:   23 VRIHPVVLFSVVDSYERRNEDAKRVIGTLLGTVDKQNVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVTPNEQIVGWYATGYDITEHSVLIHE-YYSRET-QNPIHLTIDTTLRGGNMSIKAYVSASMGAPGKTMGVMFTPLSVKYEYYDPERIGVEIIQRTRSNNKRTVSMTSELTQVGAAAAQIQDMLTLVLQYVEDVLSGKVVPDNTVGRFLMDLVNKVPKLAPEDFEAMINSNINDLLMVTYLSNLTKAQLALNEKLV 286
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Sea Lamprey
Match: psmd7 (proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541])

HSP 1 Score: 80.1073 bits (196), Expect = 1.834e-17
Identity = 47/142 (33.10%), Postives = 79/142 (55.63%), Query Frame = 1 
Query:   52 ESVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            ++V K+ +HP+ L S+ D F R   V +  RV+G LLG      + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY +
Sbjct:    4 QTVDKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWYKGVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LMKRYCSNSVLVIIDAKPKDLGLPTEAYIA 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Yeast
Match: RPN8 (Essential non-ATPase regulatory subunit of the 26S proteasome; has similarity to the human p40 proteasomal subunit and to another S. cerevisiae regulatory subunit, Rpn11p [Source:SGD;Acc:S000005787])

HSP 1 Score: 79.337 bits (194), Expect = 2.646e-17
Identity = 77/288 (26.74%), Postives = 133/288 (46.18%), Query Frame = 1 
Query:   64 KINIHPVALFSITDAFER-RSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEV---FMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTS-RPIGVPNKSNGVMFVPIEVQIIAHESE--------RYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIP--------KIDTE---------KLEELVSSSTKDLLMYTYLCTLIKT 837
            K+ I P+ L S  D +ER ++  N R +G +LG  +S  I VTNSFA+P  E++      F+   + + M  +  K+N  EK++GWY +G ++   S L   + ++K  +   + L+VD   Q + +   AY +   +     S    F+ +   I A E+E        R   D    GLS     + +   L  +  + S + +    V+EY+ KV+NKE+  +  I  KL  +   +P        +ID E          L++ ++  T D LM  Y+  L+++
Sbjct:    7 KVTIAPLVLLSALDHYERTQTKENKRCVGVILGDANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRA-SDLKINELFKKYTQNNPLLLIVDVKQQGVGLPTDAYVAIEQVKDDGTSTEKTFLHLPCTIEAEEAEEIGVEHLLRDVRDQAAGGLS-----IRLTNQLKSLKGLQSKLKD----VVEYLDKVINKELPINHTILGKLQDVFNLLPNLGTPDDDEIDVENHDRINISNNLQKALTVKTNDELMVIYISNLVRS 284
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Nematostella
Match: EDO36347 (Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/TrEMBL;Acc:A7SIV6])

HSP 1 Score: 210.69 bits (535), Expect = 4.111e-67
Identity = 108/268 (40.30%), Postives = 168/268 (62.69%), Query Frame = 1 
Query:   64 KINIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMF--VPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKL 861
            K+ IHPV LFS+ DAFERR++   RVIGTLLG  D   + + + F VPH E+  EV + +E+ ++M  L+ K NP+E+IVGWY+TGS++T HS L+HE YY +      V + VDT+++ L + IK Y S  +GVP K+ G MF  +P EV++     E+  +D+++   S  K+ V +  D+  V   +  +LEM+  V+ YV +V+   +  D  +GR L   V ++PK+  E+ E +++S+ +DLLM  YL +L KT++ + EKL
Sbjct:    7 KVLIHPVVLFSVVDAFERRNEDAKRVIGTLLGTVDKGVVEIRSCFGVPHNESADEVAVELEYAKSMYELSQKANPNEQIVGWYATGSDVTEHSLLIHE-YYSRETNNP-VHMTVDTTLKGLKMGIKTYQSVKMGVPGKTEGTMFSQIPCEVKLTG--PEKVGVDVLQRTKSTPKKAVSLISDMQHVTGATDRLLEMLETVITYVEEVLAGSVPADNVVGRDLTSFVNSVPKMTAEEFEAMLNSNMQDLLMIVYLSSLCKTQLALGEKL 270
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Nematostella
Match: EDO45776 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RRK5])

HSP 1 Score: 86.2705 bits (212), Expect = 2.214e-19
Identity = 76/278 (27.34%), Postives = 130/278 (46.76%), Query Frame = 1 
Query:   52 ESVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS----RPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVL----EYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKT 837
            E++  + +HP+ L S+ D F R   V S  RV+G LLG      + V N FAVP  E+D +    F+  ++ + M  +  KVN  E+IVGWY TG ++  +  +++E     L R+ C   V +++D   + L +   AY +       G P       F  I  +I A E+E   ++ +   + N          LSQ I      L+ +   L    +Y+ KV  K++  +  I  +L  +   +P +D E   + V+  T D ++  Y+ +LI++
Sbjct:    6 EAITTVVVHPIVLLSVVDHFNRMGKVGSQKRVVGVLLGSRRKGVLDVANCFAVPFDEDDRDQNVWFLDHDYLENMYAMFKKVNARERIVGWYHTGPKLHRNDVVINE-----LIRRYCSNSVLVIIDAKPKDLRLPTDAYVAVEEVHDDGTPTTKT---FEHIPSEIGAEEAEEVGVEHLLRDIKN-----LTAGTLSQRITNQLTSLKGLHARLGDIRDYLEKVATKKLPVNHTIIYELQDVFNLLPNLDIEDFCKAVTVKTNDQMLVVYVASLIRS 270
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Nematostella
Match: EDO35377 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLN0])

HSP 1 Score: 66.6254 bits (161), Expect = 1.379e-12
Identity = 61/270 (22.59%), Postives = 121/270 (44.81%), Query Frame = 1 
Query:   61 VKINIHPVALFSITDAFER----RSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTE-NDTEVFMSIEFNQT----MIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCR--KQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALD-LMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIK 834
            V + +HP+ + +I++ + R        N +V+G LLG  D R + + NSF +     +D  + +++E+ +T       +  +V  +   +GWY+TGS        +H    +++C   +  +FL ++   ++ D+ I  Y S  I + N    ++FV I   +   E+ER  +D + +   S       +   L    N    +   + +++EYV  V   E   + EI R    +   +P + T+  +        D+++  YL T+ K
Sbjct:   21 VSVALHPLVILNISEHYTRIRAQEGKPNPQVVGALLGTQDGRSMEIFNSFELQFDSFDDGHIVINMEYYKTKEEQCKDIFRQVFKNLDFLGWYTTGSGAQGSDLGIH----KQICEINESPIFLKLNPLARTNDLPISMYES-VIDLVNGETRMLFVEIPYTLATEEAERIGVDHVARLSSSGTVDGATVSDHLLAQYNAIKMLHARVKMIMEYVKAVKAGEAPCNHEIMRDALSLCQRLPVMKTDIFKGDFYDQCNDVMLMCYLATVTK 285
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Medaka
Match: eif3f (eukaryotic translation initiation factor 3 subunit F [Source:NCBI gene;Acc:101160586])

HSP 1 Score: 220.32 bits (560), Expect = 1.736e-70
Identity = 113/266 (42.48%), Postives = 170/266 (63.91%), Query Frame = 1 
Query:   67 INIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLL 864
            + IHPV L SI D++ERR++  SRVIGTLLG  D   I VTN F+VPH E++ EV + +EF + M  L+ +V+P+E I+GWY+TG +IT HS L+HE YY +      + L VDT++QS  + I+AY S  +GVP K+ GVMF P+ V+ I +++ER  +DL++       R   +  DLSQV   ++ V +M+T VL Y+  V++ ++  D  +GR L  +V  +P I  E  E +++S+  DLLM TYL  L + ++ + EKL+
Sbjct:    8 VKIHPVVLASICDSYERRNEGASRVIGTLLGTVDKHSIEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKRVSPTEVIIGWYATGFDITEHSVLIHE-YYSREASNP-IHLTVDTALQSGKMNIRAYLSAQMGVPGKTVGVMFTPLTVKYIYYDTERIGVDLLQRTRDAPSRSKGLTSDLSQVGGAAARVQDMLTTVLAYIDDVLSGKVAADNSVGRFLTDLVNKVPTIPPEDFENMLNSNINDLLMVTYLSNLTQAQIALHEKLV 271
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Medaka
Match: psmd7 (proteasome 26S subunit, non-ATPase 7 [Source:NCBI gene;Acc:101161802])

HSP 1 Score: 80.8777 bits (198), Expect = 4.478e-17
Identity = 47/141 (33.33%), Postives = 78/141 (55.32%), Query Frame = 1 
Query:   55 SVVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTENDTE---VFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQC---VFLLVDTSMQSLDVAIKAYTS 453
            +V  + +HP+ L S+ D F R   V +  RV+G LLG    + + V+NSFAVP  E+D +    F+  ++ + M G+  KVN  E+IVGWY TG ++  +   ++E     L ++ C   V +++D   + L +  +AY S
Sbjct:    5 AVENVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWHKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINE-----LIKRYCNNSVLVIIDVKPKDLGLPTEAYIS 140
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Medaka
Match: COPS6 (COP9 signalosome subunit 6 [Source:NCBI gene;Acc:101166310])

HSP 1 Score: 64.6994 bits (156), Expect = 2.009e-11
Identity = 61/265 (23.02%), Postives = 119/265 (44.91%), Query Frame = 1 
Query:   61 VKINIHPVALFSITDAFERRSDVNSR---VIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCR--KQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALD-LMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKT 837
            V + +HP+ + +I+D + R      R   VIG L+G  + R+I V NSF +     D +V +  E+  T      +V    + +GWY+TG    P    +H   ++++C   +  +FL ++   +  D+ +  Y S  I + +    ++F  +   +   E+ER  +D + +   +    +  +   L    +    +   + ++LEYV  V   E+  + EI R+   +   +P + T K +        D+ +  YL T+ KT
Sbjct:   80 VSVALHPLVILNISDHWIRIRSQEGRPMQVIGALIGKQEGRNIEVMNSFELMSHTIDDKVHIDKEYYYTKEEQFKQVFKDMEFLGWYTTGG--PPDQSDIH--IHKQVCEIIESPLFLKLNPMTKHTDLPVSVYES-VIDIISGEATMLFAELTYTLATEEAERIGVDHVARMTATGTGENSTVAEHLIAQHSAIKMLHSRVKIILEYVKAVEAGEVPFNHEILREANALCHRLPVLSTIKFKTDFYDQCNDVGLMAYLGTITKT 339
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Medaka
Match: COPS6 (COP9 signalosome subunit 6 [Source:NCBI gene;Acc:101166310])

HSP 1 Score: 56.225 bits (134), Expect = 1.042e-8
Identity = 58/265 (21.89%), Postives = 119/265 (44.91%), Query Frame = 1 
Query:   61 VKINIHPVALFSITDAFERRSDVNSR---VIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCR--KQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALD-LMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKT 837
            V + +HP+ + +I+D + R      R   VIG L+G  + R+I V NSF +     D +V +  E+  T      +V    + +GWY+TG    P    +H   ++++C   +  +FL ++   +  D+ +  Y S  I + +    ++F  +   +   E+ER  +D + +   +    +   +  L   +  + N + +    + ++S    +E+  + EI R+   +   +P + T K +        D+ +  YL T+ KT
Sbjct:   28 VSVALHPLVILNISDHWIRIRSQEGRPMQVIGALIGKQEGRNIEVMNSFELMSHTIDDKVHIDKEYYYTKEEQFKQVFKDMEFLGWYTTGG--PPDQSDIH--IHKQVCEIIESPLFLKLNPMTKHTDLPVSVYES-VIDIISGEATMLFAELTYTLATEEAERIGVDHVARMTATGTGENSTGEGGLG--LQQTHNSIHVCHGTVRFMS----REVPFNHEILREANALCHRLPVLSTIKFKTDFYDQCNDVGLMAYLGTITKT 281
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Planmine SMEST
Match: SMESG000005863.1 (SMESG000005863.1)

HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1 
Query:   49 MESVVKINIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLNSS 873
            MESVVKINIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLNSS
Sbjct:    1 MESVVKINIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSFAVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLNSS 275
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Planmine SMEST
Match: SMESG000030216.1 (SMESG000030216.1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.239e-16
Identity = 69/280 (24.64%), Postives = 137/280 (48.93%), Query Frame = 1 
Query:   58 VVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTEN--DTEV-FMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKLVHEDYYQKLCRKQCVFLLVDTSMQSLD-VAIKAYTSRPIGVPNKSNGVM----FVPIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMITVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKDLLMYTYLCTLIKTEMKITEKLLN 867
            V K+ +HP+ L S+ D + R S      RV+G +LG+     + +TNSFAVP  E+  D +V FM  ++ + M G+  KVN  EKIVGWY +G ++  +   ++E +  +      V ++VD   +  D +  +AY +         +G +    F  I  +I A ESE   ++ +   + +       +   +Q++ +   +   +  + +Y+S V++K I  + +I   L  ++  +P I  + + +       D ++  Y+ +LI+  + + + ++N
Sbjct:    7 VQKVVVHPLVLLSVVDHYSRLSKSAGIKRVVGVILGFMRKNVLEITNSFAVPFEEDIGDKDVWFMDHDYLENMFGMFKKVNAKEKIVGWYHSGPKLKQNDIKINELF--RRYNSNSVMVIVDVEPKESDGLPTEAYLAID---EVHDDGTLTTKTFKHIPSEIGAEESEEVGVEHLLRDIKDSSIGSLAQKIQNQLLGLRG-LKANLNEIFDYLSLVMDKRIPINYQIIYHLQDMLNFLPDISFKDMIKSQYIKVNDQMLVLYIGSLIRAILSLHDLIVN 280
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Planmine SMEST
Match: SMESG000004074.1 (SMESG000004074.1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.078e-14
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1 
Query:   58 VVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFAVPHTEN--DTEV-FMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEI 330
            + K+ +HP+ L S+ D + R S  +   RV+G LLGY     + +TNS+AVP  E+  D  V F+  ++ ++M  +  KVN  EKIVGWY +G ++
Sbjct:   17 ISKVVVHPLVLLSVVDHYNRLSKASGSKRVVGVLLGYMRKDVLEITNSYAVPFEEDLGDKNVWFLDHDYLESMFSMFKKVNAKEKIVGWYHSGPKL 112
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Planmine SMEST
Match: SMESG000004091.1 (SMESG000004091.1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.388e-10
Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 1 
Query:   58 VVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFA---------------VPHTEN--DTEV-FMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEI 330
            + K+ +HP+ L S+ D + R S  +   RV+G LLGY     + +TNS+A               VP  E+  D  V F+  ++ ++M  +  KVN  EKIVGWY +G ++
Sbjct:   17 ISKVVVHPLVLLSVVDHYNRLSKASGSKRVVGVLLGYMRKDVLEITNSYAGKKNNINLNFYSSNLVPFEEDLGDKNVWFLDHDYLESMFSMFKKVNAKEKIVGWYHSGPKL 127
[Close]
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Planmine SMEST
Match: SMESG000004091.1 (SMESG000004091.1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.447e-10
Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 1 
Query:   58 VVKINIHPVALFSITDAFERRSDVNS--RVIGTLLGYTDSRDIHVTNSFA---------------VPHTEN--DTEV-FMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEI 330
            + K+ +HP+ L S+ D + R S  +   RV+G LLGY     + +TNS+A               VP  E+  D  V F+  ++ ++M  +  KVN  EKIVGWY +G ++
Sbjct:   20 ISKVVVHPLVLLSVVDHYNRLSKASGSKRVVGVLLGYMRKDVLEITNSYAGKKNNINLNFYSSNLVPFEEDLGDKNVWFLDHDYLESMFSMFKKVNAKEKIVGWYHSGPKL 130
The following BLAST results are available for this feature:
BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
EIF3F1.998e-6640.45eukaryotic translation initiation factor 3 subunit... [more]
EIF3F1.998e-6640.45eukaryotic translation initiation factor 3 subunit... [more]
PSMD71.298e-1834.04proteasome 26S subunit, non-ATPase 7 [Source:HGNC ... [more]
PSMD78.846e-1834.04proteasome 26S subunit, non-ATPase 7 [Source:HGNC ... [more]
PSMD71.059e-1734.04proteasome 26S subunit, non-ATPase 7 [Source:HGNC ... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
eif-3.F5.390e-4230.51Eukaryotic translation initiation factor 3 subunit... [more]
rpn-89.458e-1633.09Proteasome Regulatory Particle, Non-ATPase-like [... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
eIF3f11.871e-6437.55gene:FBgn0037270 transcript:FBtr0078892[more]
eIF3f22.087e-4929.75gene:FBgn0033069 transcript:FBtr0085990[more]
Rpn89.503e-1834.51gene:FBgn0002787 transcript:FBtr0332921[more]
Rpn89.503e-1834.51gene:FBgn0002787 transcript:FBtr0072290[more]
Rpn81.308e-1734.51gene:FBgn0002787 transcript:FBtr0330237[more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
eif3f3.771e-7243.23eukaryotic translation initiation factor 3, subuni... [more]
psmd78.617e-1834.04proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;... [more]
psmd71.934e-1734.04proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rabl34.945e-7442.32RAB, member of RAS oncogene family-like 3 [Source:... [more]
rabl31.421e-7042.25RAB, member of RAS oncogene family-like 3 [Source:... [more]
nnt3.404e-1733.33nicotinamide nucleotide transhydrogenase [Source:X... [more]
cpe2.614e-1322.39carboxypeptidase E [Source:Xenbase;Acc:XB-GENE-952... [more]
cpe3.180e-1322.39carboxypeptidase E [Source:Xenbase;Acc:XB-GENE-952... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Eif3f7.295e-6640.07eukaryotic translation initiation factor 3, subuni... [more]
Psmd76.835e-1834.04proteasome (prosome, macropain) 26S subunit, non-A... [more]
Cops64.064e-1222.01COP9 signalosome subunit 6 [Source:MGI Symbol;Acc:... [more]
Cops65.970e-1222.01COP9 signalosome subunit 6 [Source:MGI Symbol;Acc:... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q4R5B8|EIF3F_MACFA8.101e-6640.45Eukaryotic translation initiation factor 3 subunit... [more]
sp|A5A6I3|EIF3F_PANTR8.549e-6640.45Eukaryotic translation initiation factor 3 subunit... [more]
sp|O00303|EIF3F_HUMAN9.593e-6640.45Eukaryotic translation initiation factor 3 subunit... [more]
sp|B4JGX4|EI3F1_DROGR2.565e-6538.66Eukaryotic translation initiation factor 3 subunit... [more]
sp|B4LZ60|EI3F1_DROVI2.920e-6538.66Eukaryotic translation initiation factor 3 subunit... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1S3IIR15.366e-7646.01Eukaryotic translation initiation factor 3 subunit... [more]
V4ACT11.869e-7545.02Eukaryotic translation initiation factor 3 subunit... [more]
K1QTW61.005e-7446.42Eukaryotic translation initiation factor 3 subunit... [more]
T1JB039.951e-7443.77Eukaryotic translation initiation factor 3 subunit... [more]
A0A5J4NLY61.171e-7343.38Translation initiation factor 3 subunit F OS=Parag... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
eif3f7.177e-7342.48eukaryotic translation initiation factor 3 subunit... [more]
psmd73.483e-1834.75proteasome 26S subunit, non-ATPase 7 [Source:NCBI ... [more]
COPS63.475e-1222.39COP9 signalosome subunit 6 [Source:HGNC Symbol;Acc... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
eif3f3.720e-7542.11eukaryotic translation initiation factor 3, subuni... [more]
psmd71.834e-1733.10proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
RPN82.646e-1726.74Essential non-ATPase regulatory subunit of the 26S... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 3
Match NameE-valueIdentityDescription
EDO363474.111e-6740.30Eukaryotic translation initiation factor 3 subunit... [more]
EDO457762.214e-1927.34Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO353771.379e-1222.59Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4
Match NameE-valueIdentityDescription
eif3f1.736e-7042.48eukaryotic translation initiation factor 3 subunit... [more]
psmd74.478e-1733.33proteasome 26S subunit, non-ATPase 7 [Source:NCBI ... [more]
COPS62.009e-1123.02COP9 signalosome subunit 6 [Source:NCBI gene;Acc:1... [more]
COPS61.042e-821.89COP9 signalosome subunit 6 [Source:NCBI gene;Acc:1... [more]
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BLAST of Eukaryotic translation initiation factor 3 subunit F vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000005863.10.000e+0100.00SMESG000005863.1[more]
SMESG000030216.12.239e-1624.64SMESG000030216.1[more]
SMESG000004074.14.078e-1438.54SMESG000004074.1[more]
SMESG000004091.11.388e-1033.33SMESG000004091.1[more]
SMESG000004091.11.447e-1033.33SMESG000004091.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30028361 ID=SMED30028361|Name=Eukaryotic translation initiation factor 3 subunit F|organism=Schmidtea mediterranea sexual|type=transcript|length=924bp
GTTTTGTTTTAATATACAATACTTGTTTAAACTTTTAGATATTTTAAAAT
GGAAAGTGTTGTTAAAATTAATATTCATCCAGTGGCTCTATTTTCAATAA
CGGATGCATTTGAAAGAAGGTCTGATGTAAATTCTCGTGTTATCGGTACT
CTTTTGGGATATACTGATAGTAGAGATATCCATGTCACAAATTCATTTGC
TGTTCCACATACAGAAAATGATACAGAAGTTTTCATGTCAATTGAATTTA
ACCAAACCATGATTGGTTTGAATGGAAAAGTTAATCCCAGTGAAAAAATT
GTTGGGTGGTATTCAACTGGGTCAGAAATAACTCCTCATTCTAAATTAGT
TCATGAAGATTATTATCAAAAATTATGTCGTAAACAGTGTGTATTTTTAC
TTGTCGACACTAGTATGCAATCTTTAGATGTTGCTATTAAAGCTTACACT
AGTCGTCCTATTGGTGTACCGAATAAAAGTAATGGAGTAATGTTTGTTCC
CATTGAAGTACAAATAATTGCTCATGAATCGGAAAGATATGCATTGGATT
TAATGAAAGAAGGATTAAGTAATAAAAAAAGACATGTTTATATGAAACCT
GACTTATCTCAGGTGATTAATGTAAGTAGTAATGTACTAGAAATGATAAC
AGTCGTTTTGGAATATGTCTCTAAAGTCGTTAATAAAGAAATAAAACCTG
ATCCAGAAATAGGTCGTAAACTGGCACAGATTGTACTTGCTATTCCTAAA
ATTGATACTGAAAAATTAGAAGAACTCGTATCATCAAGCACAAAGGATCT
ATTGATGTATACATATTTGTGTACATTAATTAAAACTGAAATGAAAATCA
CGGAGAAACTATTGAATTCCTCTTAAATACATTTTTGTTTTGATTTCAAA
TATATTATCTTGGATATTCTAAAA
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protein sequence of SMED30028361-orf-1

>SMED30028361-orf-1 ID=SMED30028361-orf-1|Name=SMED30028361-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=276bp
MESVVKINIHPVALFSITDAFERRSDVNSRVIGTLLGYTDSRDIHVTNSF
AVPHTENDTEVFMSIEFNQTMIGLNGKVNPSEKIVGWYSTGSEITPHSKL
VHEDYYQKLCRKQCVFLLVDTSMQSLDVAIKAYTSRPIGVPNKSNGVMFV
PIEVQIIAHESERYALDLMKEGLSNKKRHVYMKPDLSQVINVSSNVLEMI
TVVLEYVSKVVNKEIKPDPEIGRKLAQIVLAIPKIDTEKLEELVSSSTKD
LLMYTYLCTLIKTEMKITEKLLNSS*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: biological process
TermDefinition
GO:0001732formation of cytoplasmic translation initiation complex
GO:0002183cytoplasmic translational initiation
GO:0001731formation of translation preinitiation complex
GO:0006412translation
GO:0006413translational initiation
GO:0006446regulation of translational initiation
Vocabulary: molecular function
TermDefinition
GO:0031369translation initiation factor binding
GO:0005515protein binding
GO:0003743translation initiation factor activity
Vocabulary: INTERPRO
TermDefinition
IPR027531eIF3f
IPR037518MPN
IPR000555JAMM/MPN+_dom
IPR024969Rpn11/EIF3F_C
Vocabulary: cellular component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
GO:0016282eukaryotic 43S preinitiation complex
GO:0033290eukaryotic 48S preinitiation complex
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000555JAB1/MPN/MOV34 metalloenzyme domainSMARTSM00232pad1_6coord: 6..138
e-value: 2.6E-17
score: 73.5
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 3..108
e-value: 4.2E-20
score: 71.9
NoneNo IPR availableGENE3DG3DSA:3.40.140.10coord: 2..177
e-value: 9.3E-48
score: 164.0
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 3..274
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 160..270
e-value: 2.2E-14
score: 53.8
IPR027531Eukaryotic translation initiation factor 3 subunit FPANTHERPTHR10540:SF6EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Fcoord: 3..274
IPR027531Eukaryotic translation initiation factor 3 subunit FCDDcd08064MPN_eIF3fcoord: 7..271
e-value: 5.55481E-112
score: 321.848
IPR037518MPN domainPROSITEPS50249MPNcoord: 7..139
score: 21.821